Nuclear pore complex protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0163901 RchiOBHm_Chr4g0386381 RchiOBHm_Chr5g0025761 RchiOBHm_Chr6g0278061 |
| rosa_laevigata | RLG00000004168 RLG00000013261 RLG00000018556 RLG00000034045 |
| rosa_multiflora | Rmu_sc0005580.1_g000006 Rmu_sc0005879.1_g000016 |
| rosa_roxburghii | Rroxscaffold_2G00106940 Rroxscaffold_2G00112330 Rroxscaffold_3G00218660 Rroxscaffold_3G00241480 Rroxscaffold_4G00322650 Rroxscaffold_5G00342530 Rroxscaffold_6G00388140 Rroxscaffold_6G00388150 |
| rosa_rugosa | Rorug03G0319600 |
| rosa_samantha | Rh2AG389600 Rh2CG222000 Rh2CG376800 Rh2CG549900 Rh3BG348400 Rh4DG151500 Rh5AG180300 Rh5AG508200 Rh5BG295200 Rh5CG196800 Rh5DG178700 Rh5DG305000 Rh5DG357400 Rh6AG172600 Rh7AG471900 Rh7AG472000 Rh7DG351500 Rh7DG450400 |
| rosa_wichuraiana | Rw3G027200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 409 |
| AciI | CCGC | 2 cut(s) | 23, 70 |
| AfaI | GTAC | 1 cut(s) | 387 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 296 |
| AgsI | TTSAA | 3 cut(s) | 371, 479, 492 |
| AjnI | CCWGG | 1 cut(s) | 231 |
| AluBI | AGCT | 2 cut(s) | 151, 383 |
| AluI | AGCT | 2 cut(s) | 151, 383 |
| Alw26I | GTCTC | 1 cut(s) | 89 |
| Ama87I | CYCGRG | 1 cut(s) | 83 |
| AoxI | GGCC | 1 cut(s) | 178 |
| ApeKI | GCWGC | 2 cut(s) | 380, 404 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 178, 210 |
| AspS9I | GGNCC | 1 cut(s) | 229 |
| AsuHPI | GGTGA | 2 cut(s) | 130, 158 |
| AvaI | CYCGRG | 1 cut(s) | 83 |
| AvaII | GGWCC | 1 cut(s) | 229 |
| BauI | CACGAG | 1 cut(s) | 453 |
| BbvI | GCAGC | 2 cut(s) | 391, 392 |
| BccI | CCATC | 2 cut(s) | 125, 478 |
| BciT130I | CCWGG | 1 cut(s) | 233 |
| BcoDI | GTCTC | 1 cut(s) | 89 |
| BfmI | CTRYAG | 1 cut(s) | 363 |
| BfuAI | ACCTGC | 1 cut(s) | 409 |
| BisI | GCNGC | 3 cut(s) | 23, 381, 405 |
| BlsI | GCNGC | 3 cut(s) | 24, 382, 406 |
| Bme1390I | CCNGG | 1 cut(s) | 233 |
| Bme18I | GGWCC | 1 cut(s) | 229 |
| BmeT110I | CYCGRG | 1 cut(s) | 83 |
| BmgT120I | GGNCC | 1 cut(s) | 229 |
| BmrFI | CCNGG | 1 cut(s) | 233 |
| BmsI | GCATC | 2 cut(s) | 81, 423 |
| BsaI | GGTCTC | 1 cut(s) | 89 |
| BsaJI | CCNNGG | 3 cut(s) | 290, 313, 437 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 296 |
| Bse1I | ACTGG | 2 cut(s) | 223, 231 |
| BseBI | CCWGG | 1 cut(s) | 233 |
| BseDI | CCNNGG | 3 cut(s) | 290, 313, 437 |
| BseGI | GGATG | 2 cut(s) | 72, 447 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 296 |
| BseNI | ACTGG | 2 cut(s) | 223, 231 |
| BseRI | GAGGAG | 1 cut(s) | 18 |
| BseXI | GCAGC | 2 cut(s) | 391, 392 |
| BsgI | GTGCAG | 1 cut(s) | 450 |
| Bsh1285I | CGRYCG | 1 cut(s) | 58 |
| BshFI | GGCC | 1 cut(s) | 180 |
| BsiEI | CGRYCG | 1 cut(s) | 58 |
| BsiHKCI | CYCGRG | 1 cut(s) | 83 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 296 |
| BsmAI | GTCTC | 1 cut(s) | 89 |
| BsnI | GGCC | 1 cut(s) | 180 |
| Bso31I | GGTCTC | 1 cut(s) | 89 |
| BsoBI | CYCGRG | 1 cut(s) | 83 |
| Bsp1407I | TGTACA | 1 cut(s) | 385 |
| BspACI | CCGC | 2 cut(s) | 23, 70 |
| BspANI | GGCC | 1 cut(s) | 180 |
| BspMI | ACCTGC | 1 cut(s) | 409 |
| BspTNI | GGTCTC | 1 cut(s) | 89 |
| BsrGI | TGTACA | 1 cut(s) | 385 |
| BsrI | ACTGG | 2 cut(s) | 223, 231 |
| BssECI | CCNNGG | 3 cut(s) | 290, 313, 437 |
| BssSI | CACGAG | 1 cut(s) | 453 |
| BssT1I | CCWWGG | 1 cut(s) | 313 |
| Bst2BI | CACGAG | 1 cut(s) | 453 |
| Bst2UI | CCWGG | 1 cut(s) | 233 |
| Bst4CI | ACNGT | 4 cut(s) | 40, 64, 100, 294 |
| Bst6I | CTCTTC | 1 cut(s) | 101 |
| BstAUI | TGTACA | 1 cut(s) | 385 |
| BstC8I | GCNNGC | 4 cut(s) | 182, 246, 328, 497 |
| BstDSI | CCRYGG | 1 cut(s) | 290 |
| BstF5I | GGATG | 2 cut(s) | 72, 447 |
| BstMAI | GTCTC | 1 cut(s) | 89 |
| BstMCI | CGRYCG | 1 cut(s) | 58 |
| BstNI | CCWGG | 1 cut(s) | 233 |
| BstNSI | RCATGY | 1 cut(s) | 499 |
| BstSCI | CCNGG | 1 cut(s) | 231 |
| BstSFI | CTRYAG | 1 cut(s) | 363 |
| BstV1I | GCAGC | 2 cut(s) | 391, 392 |
| BsuRI | GGCC | 1 cut(s) | 180 |
| BtgI | CCRYGG | 1 cut(s) | 290 |
| BtsCI | GGATG | 2 cut(s) | 72, 447 |
| BveI | ACCTGC | 1 cut(s) | 409 |
| Cac8I | GCNNGC | 4 cut(s) | 182, 246, 328, 497 |
| Cfr13I | GGNCC | 1 cut(s) | 229 |
| CsiI | ACCWGGT | 1 cut(s) | 231 |
| Csp6I | GTAC | 1 cut(s) | 386 |
| CviAII | CATG | 2 cut(s) | 430, 496 |
| CviJI | RGCY | 7 cut(s) | 22, 52, 151, 162, 180, 375, 383 |
| CviKI_1 | RGCY | 7 cut(s) | 22, 52, 151, 162, 180, 375, 383 |
| CviQI | GTAC | 1 cut(s) | 386 |
| Eam1104I | CTCTTC | 1 cut(s) | 101 |
| EarI | CTCTTC | 1 cut(s) | 101 |
| Eco130I | CCWWGG | 1 cut(s) | 313 |
| Eco147I | AGGCCT | 1 cut(s) | 180 |
| Eco31I | GGTCTC | 1 cut(s) | 89 |
| Eco47I | GGWCC | 1 cut(s) | 229 |
| Eco88I | CYCGRG | 1 cut(s) | 83 |
| EcoRII | CCWGG | 1 cut(s) | 231 |
| EcoT14I | CCWWGG | 1 cut(s) | 313 |
| ErhI | CCWWGG | 1 cut(s) | 313 |
| FaeI | CATG | 2 cut(s) | 433, 499 |
| FaiI | YATR | 6 cut(s) | 261, 378, 431, 483, 497, 506 |
| FatI | CATG | 2 cut(s) | 429, 495 |
| FauI | CCCGC | 1 cut(s) | 77 |
| Fnu4HI | GCNGC | 3 cut(s) | 23, 381, 405 |
| FokI | GGATG | 2 cut(s) | 59, 454 |
| Fsp4HI | GCNGC | 3 cut(s) | 23, 381, 405 |
| GluI | GCNGC | 3 cut(s) | 23, 381, 405 |
| HaeIII | GGCC | 1 cut(s) | 180 |
| Hin1II | CATG | 2 cut(s) | 433, 499 |
| HphI | GGTGA | 2 cut(s) | 130, 158 |
| Hpy188I | TCNGA | 1 cut(s) | 441 |
| Hpy188III | TCNNGA | 1 cut(s) | 85 |
| Hpy99I | CGWCG | 1 cut(s) | 40 |
| HpyAV | CCTTC | 1 cut(s) | 170 |
| HpyCH4III | ACNGT | 4 cut(s) | 40, 64, 100, 294 |
| HpyCH4V | TGCA | 5 cut(s) | 156, 184, 380, 407, 467 |
| Hsp92II | CATG | 2 cut(s) | 433, 499 |
| Lsp1109I | GCAGC | 2 cut(s) | 391, 392 |
| LweI | GCATC | 2 cut(s) | 81, 423 |
| MabI | ACCWGGT | 1 cut(s) | 231 |
| MboII | GAAGA | 1 cut(s) | 118 |
| MfeI | CAATTG | 1 cut(s) | 447 |
| MluCI | AATT | 5 cut(s) | 198, 239, 414, 447, 474 |
| MnlI | CCTC | 5 cut(s) | 36, 39, 102, 109, 447 |
| MseI | TTAA | 4 cut(s) | 102, 237, 282, 522 |
| MspA1I | CMGCKG | 1 cut(s) | 383 |
| MspR9I | CCNGG | 1 cut(s) | 233 |
| MunI | CAATTG | 1 cut(s) | 447 |
| MvaI | CCWGG | 1 cut(s) | 233 |
| NlaIII | CATG | 2 cut(s) | 433, 499 |
| NspI | RCATGY | 1 cut(s) | 499 |
| PaeI | GCATGC | 1 cut(s) | 499 |
| PaeR7I | CTCGAG | 1 cut(s) | 83 |
| PceI | AGGCCT | 1 cut(s) | 180 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 41, 55 |
| PflFI | GACNNNGTC | 1 cut(s) | 40 |
| PkrI | GCNGC | 3 cut(s) | 24, 382, 406 |
| Psp6I | CCWGG | 1 cut(s) | 231 |
| PspGI | CCWGG | 1 cut(s) | 231 |
| PspPI | GGNCC | 1 cut(s) | 229 |
| PsyI | GACNNNGTC | 1 cut(s) | 40 |
| PvuII | CAGCTG | 1 cut(s) | 383 |
| RsaI | GTAC | 1 cut(s) | 387 |
| RsaNI | GTAC | 1 cut(s) | 386 |
| SaqAI | TTAA | 4 cut(s) | 102, 237, 282, 522 |
| SatI | GCNGC | 3 cut(s) | 23, 381, 405 |
| Sau96I | GGNCC | 1 cut(s) | 229 |
| ScrFI | CCNGG | 1 cut(s) | 233 |
| SetI | ASST | 6 cut(s) | 120, 153, 234, 281, 385, 403 |
| SexAI | ACCWGGT | 1 cut(s) | 231 |
| SfaNI | GCATC | 2 cut(s) | 81, 423 |
| SfcI | CTRYAG | 1 cut(s) | 363 |
| Sfr274I | CTCGAG | 1 cut(s) | 83 |
| SinI | GGWCC | 1 cut(s) | 229 |
| SlaI | CTCGAG | 1 cut(s) | 83 |
| SmlI | CTYRAG | 1 cut(s) | 83 |
| SmoI | CTYRAG | 1 cut(s) | 83 |
| SphI | GCATGC | 1 cut(s) | 499 |
| Sse9I | AATT | 5 cut(s) | 198, 239, 414, 447, 474 |
| SseBI | AGGCCT | 1 cut(s) | 180 |
| SsiI | CCGC | 2 cut(s) | 23, 70 |
| StuI | AGGCCT | 1 cut(s) | 180 |
| StyD4I | CCNGG | 1 cut(s) | 231 |
| StyI | CCWWGG | 1 cut(s) | 313 |
| TaaI | ACNGT | 4 cut(s) | 40, 64, 100, 294 |
| TaqI | TCGA | 3 cut(s) | 35, 58, 84 |
| TaqII | GACCGA | 1 cut(s) | 44 |
| TasI | AATT | 5 cut(s) | 198, 239, 414, 447, 474 |
| TatI | WGTACW | 1 cut(s) | 385 |
| TauI | GCSGC | 1 cut(s) | 25 |
| Tru1I | TTAA | 4 cut(s) | 102, 237, 282, 522 |
| Tru9I | TTAA | 4 cut(s) | 102, 237, 282, 522 |
| TseI | GCWGC | 2 cut(s) | 380, 404 |
| Tth111I | GACNNNGTC | 1 cut(s) | 40 |
| VpaK11BI | GGWCC | 1 cut(s) | 229 |
| XceI | RCATGY | 1 cut(s) | 499 |
| XhoI | CTCGAG | 1 cut(s) | 83 |