No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0163901 RchiOBHm_Chr4g0386381 RchiOBHm_Chr5g0025761 RchiOBHm_Chr6g0278061 |
| rosa_laevigata | RLG00000004168 RLG00000013261 RLG00000018556 RLG00000034045 |
| rosa_multiflora | Rmu_sc0005580.1_g000006 Rmu_sc0005879.1_g000016 |
| rosa_roxburghii | Rroxscaffold_2G00106940 Rroxscaffold_2G00112330 Rroxscaffold_3G00218660 Rroxscaffold_3G00241480 Rroxscaffold_4G00322650 Rroxscaffold_5G00342530 Rroxscaffold_6G00388140 Rroxscaffold_6G00388150 |
| rosa_rugosa | Rorug03G0319600 |
| rosa_samantha | Rh2AG389600 Rh2CG222000 Rh2CG376800 Rh2CG549900 Rh3BG348400 Rh4DG151500 Rh5AG180300 Rh5AG508200 Rh5BG295200 Rh5CG196800 Rh5DG178700 Rh5DG305000 Rh5DG357400 Rh6AG172600 Rh7AG471900 Rh7AG472000 Rh7DG351500 Rh7DG450400 |
| rosa_wichuraiana | Rw3G027200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 199 |
| AciI | CCGC | 1 cut(s) | 87 |
| AfaI | GTAC | 3 cut(s) | 25, 138, 191 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 199 |
| AluBI | AGCT | 3 cut(s) | 77, 110, 157 |
| AluI | AGCT | 3 cut(s) | 77, 110, 157 |
| Alw21I | GWGCWC | 1 cut(s) | 159 |
| ApeKI | GCWGC | 2 cut(s) | 110, 142 |
| BanII | GRGCYC | 1 cut(s) | 159 |
| Bbv12I | GWGCWC | 1 cut(s) | 159 |
| BbvI | GCAGC | 2 cut(s) | 97, 154 |
| BfaI | CTAG | 2 cut(s) | 62, 176 |
| BisI | GCNGC | 2 cut(s) | 111, 143 |
| BlsI | GCNGC | 2 cut(s) | 112, 144 |
| Bpu10I | CCTNAGC | 1 cut(s) | 131 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 199 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 199 |
| BseRI | GAGGAG | 1 cut(s) | 82 |
| BseXI | GCAGC | 2 cut(s) | 97, 154 |
| BsiHKAI | GWGCWC | 1 cut(s) | 159 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 199 |
| Bsp1286I | GDGCHC | 1 cut(s) | 159 |
| BspACI | CCGC | 1 cut(s) | 87 |
| BstC8I | GCNNGC | 2 cut(s) | 19, 79 |
| BstDEI | CTNAG | 1 cut(s) | 131 |
| BstV1I | GCAGC | 2 cut(s) | 97, 154 |
| Cac8I | GCNNGC | 2 cut(s) | 19, 79 |
| Csp6I | GTAC | 3 cut(s) | 24, 137, 190 |
| CviJI | RGCY | 4 cut(s) | 77, 110, 145, 157 |
| CviKI_1 | RGCY | 4 cut(s) | 77, 110, 145, 157 |
| CviQI | GTAC | 3 cut(s) | 24, 137, 190 |
| DdeI | CTNAG | 1 cut(s) | 131 |
| Ecl136II | GAGCTC | 1 cut(s) | 157 |
| Eco24I | GRGCYC | 1 cut(s) | 159 |
| Eco53kI | GAGCTC | 1 cut(s) | 157 |
| EcoICRI | GAGCTC | 1 cut(s) | 157 |
| EcoT38I | GRGCYC | 1 cut(s) | 159 |
| FaiI | YATR | 1 cut(s) | 120 |
| Fnu4HI | GCNGC | 2 cut(s) | 111, 143 |
| FriOI | GRGCYC | 1 cut(s) | 159 |
| Fsp4HI | GCNGC | 2 cut(s) | 111, 143 |
| FspBI | CTAG | 2 cut(s) | 62, 176 |
| GluI | GCNGC | 2 cut(s) | 111, 143 |
| HindIII | AAGCTT | 1 cut(s) | 75 |
| HinfI | GANTC | 1 cut(s) | 204 |
| Hpy188III | TCNNGA | 2 cut(s) | 62, 176 |
| HpyAV | CCTTC | 1 cut(s) | 156 |
| HpyCH4V | TGCA | 1 cut(s) | 81 |
| HpyF3I | CTNAG | 1 cut(s) | 131 |
| LpnPI | CCDG | 1 cut(s) | 31 |
| Lsp1109I | GCAGC | 2 cut(s) | 97, 154 |
| MaeI | CTAG | 2 cut(s) | 62, 176 |
| MboII | GAAGA | 2 cut(s) | 31, 191 |
| MhlI | GDGCHC | 1 cut(s) | 159 |
| MluCI | AATT | 1 cut(s) | 171 |
| MnlI | CCTC | 2 cut(s) | 60, 174 |
| PfeI | GAWTC | 1 cut(s) | 204 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 199 |
| PkrI | GCNGC | 2 cut(s) | 112, 144 |
| Psp124BI | GAGCTC | 1 cut(s) | 159 |
| RsaI | GTAC | 3 cut(s) | 25, 138, 191 |
| RsaNI | GTAC | 3 cut(s) | 24, 137, 190 |
| SacI | GAGCTC | 1 cut(s) | 159 |
| SatI | GCNGC | 2 cut(s) | 111, 143 |
| SduI | GDGCHC | 1 cut(s) | 159 |
| SetI | ASST | 3 cut(s) | 79, 112, 159 |
| SgeI | CNNG | 6 cut(s) | 30, 39, 74, 90, 115, 188 |
| Sse9I | AATT | 1 cut(s) | 171 |
| SsiI | CCGC | 1 cut(s) | 87 |
| SspMI | CTAG | 2 cut(s) | 62, 176 |
| SstI | GAGCTC | 1 cut(s) | 159 |
| TasI | AATT | 1 cut(s) | 171 |
| TfiI | GAWTC | 1 cut(s) | 204 |
| TseI | GCWGC | 2 cut(s) | 110, 142 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 199 |
| XbaI | TCTAGA | 2 cut(s) | 61, 175 |
| XspI | CTAG | 2 cut(s) | 62, 176 |