Beta-L-arabinofuranosidase, GH127
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0163901 RchiOBHm_Chr4g0386381 RchiOBHm_Chr5g0025761 RchiOBHm_Chr6g0278061 |
| rosa_laevigata | RLG00000004168 RLG00000013261 RLG00000018556 RLG00000034045 |
| rosa_multiflora | Rmu_sc0005580.1_g000006 Rmu_sc0005879.1_g000016 |
| rosa_roxburghii | Rroxscaffold_2G00106940 Rroxscaffold_2G00112330 Rroxscaffold_3G00218660 Rroxscaffold_3G00241480 Rroxscaffold_4G00322650 Rroxscaffold_5G00342530 Rroxscaffold_6G00388140 Rroxscaffold_6G00388150 |
| rosa_rugosa | Rorug03G0319600 |
| rosa_samantha | Rh2AG389600 Rh2CG222000 Rh2CG376800 Rh2CG549900 Rh3BG348400 Rh4DG151500 Rh5AG180300 Rh5AG508200 Rh5BG295200 Rh5CG196800 Rh5DG178700 Rh5DG305000 Rh5DG357400 Rh6AG172600 Rh7AG471900 Rh7AG472000 Rh7DG351500 Rh7DG450400 |
| rosa_wichuraiana | Rw3G027200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 150 |
| AciI | CCGC | 1 cut(s) | 37 |
| AclWI | GGATC | 2 cut(s) | 127, 171 |
| AcuI | CTGAAG | 1 cut(s) | 179 |
| AgsI | TTSAA | 1 cut(s) | 248 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 12 |
| AluBI | AGCT | 1 cut(s) | 163 |
| AluI | AGCT | 1 cut(s) | 163 |
| Alw21I | GWGCWC | 1 cut(s) | 143 |
| Alw44I | GTGCAC | 1 cut(s) | 139 |
| AlwI | GGATC | 2 cut(s) | 127, 171 |
| ApaLI | GTGCAC | 1 cut(s) | 139 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 241, 273 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 202, 243 |
| AspS9I | GGNCC | 1 cut(s) | 292 |
| AvaII | GGWCC | 1 cut(s) | 292 |
| BaeGI | GKGCMC | 1 cut(s) | 143 |
| BbsI | GAAGAC | 2 cut(s) | 11, 236 |
| Bbv12I | GWGCWC | 1 cut(s) | 143 |
| BfaI | CTAG | 3 cut(s) | 87, 116, 185 |
| BfmI | CTRYAG | 2 cut(s) | 172, 268 |
| Bme18I | GGWCC | 1 cut(s) | 292 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 12 |
| BmgT120I | GGNCC | 1 cut(s) | 292 |
| BmiI | GGNNCC | 1 cut(s) | 93 |
| BpiI | GAAGAC | 2 cut(s) | 11, 236 |
| Bse1I | ACTGG | 2 cut(s) | 286, 294 |
| BseGI | GGATG | 1 cut(s) | 189 |
| BseNI | ACTGG | 2 cut(s) | 286, 294 |
| BseSI | GKGCMC | 1 cut(s) | 143 |
| BsiHKAI | GWGCWC | 1 cut(s) | 143 |
| BsmI | GAATGC | 1 cut(s) | 39 |
| Bsp1286I | GDGCHC | 1 cut(s) | 143 |
| Bsp143I | GATC | 3 cut(s) | 101, 119, 176 |
| BspACI | CCGC | 1 cut(s) | 37 |
| BspLI | GGNNCC | 1 cut(s) | 93 |
| BspPI | GGATC | 2 cut(s) | 127, 171 |
| BsrI | ACTGG | 2 cut(s) | 286, 294 |
| BssMI | GATC | 3 cut(s) | 101, 119, 176 |
| BstDEI | CTNAG | 2 cut(s) | 11, 194 |
| BstF5I | GGATG | 1 cut(s) | 189 |
| BstKTI | GATC | 3 cut(s) | 104, 122, 179 |
| BstMBI | GATC | 3 cut(s) | 101, 119, 176 |
| BstNSI | RCATGY | 2 cut(s) | 76, 157 |
| BstSFI | CTRYAG | 2 cut(s) | 172, 268 |
| BstSLI | GKGCMC | 1 cut(s) | 143 |
| BstV2I | GAAGAC | 2 cut(s) | 11, 236 |
| BstX2I | RGATCY | 1 cut(s) | 176 |
| BstYI | RGATCY | 1 cut(s) | 176 |
| BtsCI | GGATG | 1 cut(s) | 189 |
| BtsI | GCAGTG | 1 cut(s) | 48 |
| BtsIMutI | CAGTG | 2 cut(s) | 8, 48 |
| Cfr13I | GGNCC | 1 cut(s) | 292 |
| CviAII | CATG | 2 cut(s) | 73, 154 |
| CviJI | RGCY | 3 cut(s) | 86, 163, 225 |
| CviKI_1 | RGCY | 3 cut(s) | 86, 163, 225 |
| DdeI | CTNAG | 2 cut(s) | 11, 194 |
| DpnI | GATC | 3 cut(s) | 103, 121, 178 |
| DpnII | GATC | 3 cut(s) | 101, 119, 176 |
| DriI | GACNNNNNGTC | 1 cut(s) | 12 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 12 |
| Eco47I | GGWCC | 1 cut(s) | 292 |
| Eco57I | CTGAAG | 1 cut(s) | 179 |
| FaeI | CATG | 2 cut(s) | 76, 157 |
| FaiI | YATR | 5 cut(s) | 62, 74, 150, 155, 210 |
| FatI | CATG | 2 cut(s) | 72, 153 |
| FauI | CCCGC | 1 cut(s) | 44 |
| FokI | GGATG | 1 cut(s) | 176 |
| FspBI | CTAG | 3 cut(s) | 87, 116, 185 |
| Hin1II | CATG | 2 cut(s) | 76, 157 |
| HinfI | GANTC | 2 cut(s) | 13, 134 |
| Hpy166II | GTNNAC | 1 cut(s) | 141 |
| Hpy188I | TCNGA | 1 cut(s) | 124 |
| Hpy188III | TCNNGA | 2 cut(s) | 28, 185 |
| Hpy8I | GTNNAC | 1 cut(s) | 141 |
| HpyAV | CCTTC | 1 cut(s) | 233 |
| HpyCH4V | TGCA | 2 cut(s) | 141, 219 |
| HpyF3I | CTNAG | 2 cut(s) | 11, 194 |
| Hsp92II | CATG | 2 cut(s) | 76, 157 |
| Kzo9I | GATC | 3 cut(s) | 101, 119, 176 |
| LpnPI | CCDG | 3 cut(s) | 239, 267, 275 |
| MaeI | CTAG | 3 cut(s) | 87, 116, 185 |
| MalI | GATC | 3 cut(s) | 103, 121, 178 |
| MboI | GATC | 3 cut(s) | 101, 119, 176 |
| MboII | GAAGA | 3 cut(s) | 16, 224, 236 |
| MflI | RGATCY | 1 cut(s) | 176 |
| MhlI | GDGCHC | 1 cut(s) | 143 |
| MluCI | AATT | 2 cut(s) | 23, 261 |
| MlyI | GAGTC | 1 cut(s) | 22 |
| MnlI | CCTC | 2 cut(s) | 76, 124 |
| MroXI | GAANNNNTTC | 2 cut(s) | 202, 243 |
| Mva1269I | GAATGC | 1 cut(s) | 39 |
| NdeII | GATC | 3 cut(s) | 101, 119, 176 |
| NlaIII | CATG | 2 cut(s) | 76, 157 |
| NlaIV | GGNNCC | 1 cut(s) | 93 |
| NspI | RCATGY | 2 cut(s) | 76, 157 |
| PctI | GAATGC | 1 cut(s) | 39 |
| PdmI | GAANNNNTTC | 2 cut(s) | 202, 243 |
| PfeI | GAWTC | 1 cut(s) | 134 |
| PleI | GAGTC | 1 cut(s) | 21 |
| PpsI | GAGTC | 1 cut(s) | 21 |
| PsiI | TTATAA | 1 cut(s) | 150 |
| PspN4I | GGNNCC | 1 cut(s) | 93 |
| PspPI | GGNCC | 1 cut(s) | 292 |
| PsuI | RGATCY | 1 cut(s) | 176 |
| Sau3AI | GATC | 3 cut(s) | 101, 119, 176 |
| Sau96I | GGNCC | 1 cut(s) | 292 |
| SchI | GAGTC | 1 cut(s) | 22 |
| SduI | GDGCHC | 1 cut(s) | 143 |
| SetI | ASST | 4 cut(s) | 97, 165, 244, 297 |
| SfcI | CTRYAG | 2 cut(s) | 172, 268 |
| SinI | GGWCC | 1 cut(s) | 292 |
| Sse9I | AATT | 2 cut(s) | 23, 261 |
| SsiI | CCGC | 1 cut(s) | 37 |
| SspMI | CTAG | 3 cut(s) | 87, 116, 185 |
| TasI | AATT | 2 cut(s) | 23, 261 |
| TfiI | GAWTC | 1 cut(s) | 134 |
| TscAI | CASTG | 2 cut(s) | 15, 55 |
| TspDTI | ATGAA | 3 cut(s) | 17, 32, 225 |
| TspRI | CASTG | 2 cut(s) | 15, 55 |
| VneI | GTGCAC | 1 cut(s) | 139 |
| VpaK11BI | GGWCC | 1 cut(s) | 292 |
| XbaI | TCTAGA | 1 cut(s) | 184 |
| XceI | RCATGY | 2 cut(s) | 76, 157 |
| XmnI | GAANNNNTTC | 2 cut(s) | 202, 243 |
| XspI | CTAG | 3 cut(s) | 87, 116, 185 |