No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0163901 RchiOBHm_Chr4g0386381 RchiOBHm_Chr5g0025761 RchiOBHm_Chr6g0278061 |
| rosa_laevigata | RLG00000004168 RLG00000013261 RLG00000018556 RLG00000034045 |
| rosa_multiflora | Rmu_sc0005580.1_g000006 Rmu_sc0005879.1_g000016 |
| rosa_roxburghii | Rroxscaffold_2G00106940 Rroxscaffold_2G00112330 Rroxscaffold_3G00218660 Rroxscaffold_3G00241480 Rroxscaffold_4G00322650 Rroxscaffold_5G00342530 Rroxscaffold_6G00388140 Rroxscaffold_6G00388150 |
| rosa_rugosa | Rorug03G0319600 |
| rosa_samantha | Rh2AG389600 Rh2CG222000 Rh2CG376800 Rh2CG549900 Rh3BG348400 Rh4DG151500 Rh5AG180300 Rh5AG508200 Rh5BG295200 Rh5CG196800 Rh5DG178700 Rh5DG305000 Rh5DG357400 Rh6AG172600 Rh7AG471900 Rh7AG472000 Rh7DG351500 Rh7DG450400 |
| rosa_wichuraiana | Rw3G027200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 202 |
| AciI | CCGC | 2 cut(s) | 89, 131 |
| AfaI | GTAC | 2 cut(s) | 141, 194 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 202 |
| AluBI | AGCT | 4 cut(s) | 79, 112, 148, 160 |
| AluI | AGCT | 4 cut(s) | 79, 112, 148, 160 |
| Alw21I | GWGCWC | 1 cut(s) | 162 |
| ApeKI | GCWGC | 1 cut(s) | 112 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 15, 47 |
| BanII | GRGCYC | 1 cut(s) | 162 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 132, 164 |
| Bbv12I | GWGCWC | 1 cut(s) | 162 |
| BbvI | GCAGC | 1 cut(s) | 99 |
| BfaI | CTAG | 1 cut(s) | 179 |
| BisI | GCNGC | 1 cut(s) | 113 |
| BlsI | GCNGC | 1 cut(s) | 114 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 202 |
| BseGI | GGATG | 1 cut(s) | 10 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 202 |
| BseRI | GAGGAG | 1 cut(s) | 84 |
| BseXI | GCAGC | 1 cut(s) | 99 |
| BsiHKAI | GWGCWC | 1 cut(s) | 162 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 202 |
| Bsp1286I | GDGCHC | 1 cut(s) | 162 |
| BspACI | CCGC | 2 cut(s) | 89, 131 |
| BstC8I | GCNNGC | 1 cut(s) | 81 |
| BstDEI | CTNAG | 1 cut(s) | 134 |
| BstF5I | GGATG | 1 cut(s) | 10 |
| BstV1I | GCAGC | 1 cut(s) | 99 |
| BtsCI | GGATG | 1 cut(s) | 10 |
| Cac8I | GCNNGC | 1 cut(s) | 81 |
| Csp6I | GTAC | 2 cut(s) | 140, 193 |
| CviAII | CATG | 1 cut(s) | 63 |
| CviJI | RGCY | 5 cut(s) | 12, 79, 112, 148, 160 |
| CviKI_1 | RGCY | 5 cut(s) | 12, 79, 112, 148, 160 |
| CviQI | GTAC | 2 cut(s) | 140, 193 |
| DdeI | CTNAG | 1 cut(s) | 134 |
| Ecl136II | GAGCTC | 1 cut(s) | 160 |
| Eco24I | GRGCYC | 1 cut(s) | 162 |
| Eco53kI | GAGCTC | 1 cut(s) | 160 |
| EcoICRI | GAGCTC | 1 cut(s) | 160 |
| EcoT38I | GRGCYC | 1 cut(s) | 162 |
| FaeI | CATG | 1 cut(s) | 66 |
| FaiI | YATR | 3 cut(s) | 30, 49, 64 |
| FatI | CATG | 1 cut(s) | 62 |
| Fnu4HI | GCNGC | 1 cut(s) | 113 |
| FokI | GGATG | 1 cut(s) | 17 |
| FriOI | GRGCYC | 1 cut(s) | 162 |
| Fsp4HI | GCNGC | 1 cut(s) | 113 |
| FspBI | CTAG | 1 cut(s) | 179 |
| GluI | GCNGC | 1 cut(s) | 113 |
| Hin1II | CATG | 1 cut(s) | 66 |
| HindIII | AAGCTT | 1 cut(s) | 77 |
| HinfI | GANTC | 1 cut(s) | 207 |
| Hpy166II | GTNNAC | 1 cut(s) | 193 |
| Hpy188I | TCNGA | 1 cut(s) | 44 |
| Hpy188III | TCNNGA | 2 cut(s) | 34, 179 |
| Hpy8I | GTNNAC | 1 cut(s) | 193 |
| HpyAV | CCTTC | 1 cut(s) | 91 |
| HpyCH4V | TGCA | 1 cut(s) | 83 |
| HpyF3I | CTNAG | 1 cut(s) | 134 |
| Hsp92II | CATG | 1 cut(s) | 66 |
| LmnI | GCTCC | 1 cut(s) | 22 |
| LpnPI | CCDG | 1 cut(s) | 44 |
| Lsp1109I | GCAGC | 1 cut(s) | 99 |
| MaeI | CTAG | 1 cut(s) | 179 |
| MboII | GAAGA | 1 cut(s) | 194 |
| MhlI | GDGCHC | 1 cut(s) | 162 |
| MluCI | AATT | 1 cut(s) | 174 |
| MnlI | CCTC | 2 cut(s) | 62, 177 |
| NlaIII | CATG | 1 cut(s) | 66 |
| PfeI | GAWTC | 1 cut(s) | 207 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 202 |
| PkrI | GCNGC | 1 cut(s) | 114 |
| Psp124BI | GAGCTC | 1 cut(s) | 162 |
| RsaI | GTAC | 2 cut(s) | 141, 194 |
| RsaNI | GTAC | 2 cut(s) | 140, 193 |
| SacI | GAGCTC | 1 cut(s) | 162 |
| SatI | GCNGC | 1 cut(s) | 113 |
| SduI | GDGCHC | 1 cut(s) | 162 |
| SetI | ASST | 4 cut(s) | 81, 114, 150, 162 |
| SgeI | CNNG | 8 cut(s) | 26, 46, 71, 75, 92, 96, 117, 191 |
| Sse9I | AATT | 1 cut(s) | 174 |
| SsiI | CCGC | 2 cut(s) | 89, 131 |
| SspMI | CTAG | 1 cut(s) | 179 |
| SstI | GAGCTC | 1 cut(s) | 162 |
| TasI | AATT | 1 cut(s) | 174 |
| TatI | WGTACW | 1 cut(s) | 139 |
| TfiI | GAWTC | 1 cut(s) | 207 |
| TseI | GCWGC | 1 cut(s) | 112 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 202 |
| XbaI | TCTAGA | 1 cut(s) | 178 |
| XspI | CTAG | 1 cut(s) | 179 |