Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0002907

Physical Location & Seq

Genomic Coordinates Forward (+)

32848503 .. 32849435

Gene Structure 933 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00354400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 732 bp

ATGGCCTCTTCCTCCTACCCGAAAACCCCGTACGTCCTCCTCTCATCCATATGCAATCTCATGCCCATCCACCTCGAATCCACCAACTACTTCATCCGGTCTCATCTCATGACCACTATCTTCAACGCCCATGGCCTCGCTCTATGGAGACCGGCTCGGAGGGAGAGAAGACGAGAGCTCAAGCTCGGAAGAGCCGAGTCGTCGTCGGTGAAATTGGATCTTTCGCATCCGCAACTACGTGTCCTGGTTTTGCCACCGAGATTGAAGGACCGTAAGCCGACGCCAACGACCGGGGAGCAGCAGAGGAAGGACTCTCTCTGGCCGGAACAACCGGAGTGGTTTATGAGGAAATGGCGGGGAGTGAGCGGCGCGCCGCCGCCTCTGCAGCAGCTTGGTAATAGAGGCTCGAGTTGTTGCTTTTGTGGAGGAGCGCTAGGAGAGCCATTCAGGGAGGATGGGCCAATACCGGGCTTGGATTTTGATCCGTTGCCACCGGGTGCATTTGGTTCCTTCGTCATCAACACCACGCTGTCCTCATTGGCGCCGCCGCACATCATCGGCTTCGACACATCCAGGGGACCCGTGGCCGACGCCGGAGAGGCGGTTCACGTCGATGTCGAATTAGAGAGGATGATAGCAAGACCGGTGATGGTTTGGGCAGAGGAGAAGGAGAGAAGAGAGAGAAGAGAGAAGAAGAAGAAGAAGAAAACCGAGGTTGAAGAAGAAACATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000976 GO:0000977 GO:0000978 GO:0000981 GO:0000982 GO:0000987 GO:0001012 GO:0001067 GO:0001077 GO:0001228 GO:0001525 GO:0001568 GO:0001944 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009653 GO:0009791 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0010228 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0022414 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0032501 GO:0032502 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0035239 GO:0035295 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0045892 GO:0045893 GO:0045934 GO:0045935 GO:0045944 GO:0046483 GO:0048514 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048608 GO:0048646 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051173 GO:0051252 GO:0051253 GO:0051254 GO:0060255 GO:0061458 GO:0065007 GO:0071704 GO:0072358 GO:0072359 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902679 GO:1902680 GO:1903506 GO:1903507 GO:1903508 GO:1990837 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DDT HARE-HTH Homeobox WHIM1 WSD

Protein Analysis

243

Amino Acids

27.45

Weight (kDa)

9.36

Isoelectric Point (pI)

57.12

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002907)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G44180 AT5G44180 AT5G44180
fragaria_vesca	FvH4_6g26700 FvH4_6g26700 FvH4_6g26700 FvH4_6g26700 FvH4_6g26700 FvH4_6g26700 FvH4_6g26700 FvH4_6g26700 FvH4_6g26700 FvH4_6g26700 FvH4_6g26700 FvH4_6g26700
rosa_chinensis	RchiOBHm_Chr2g0127081 RchiOBHm_Chr2g0127091
rosa_laevigata	RLG00000018980 RLG00000023032
rosa_multiflora	Rmu_sc0000023.1_g000012 Rmu_sc0008093.1_g000001
rosa_roxburghii	Rroxscaffold_1G00026470 Rroxscaffold_2G00115760 Rroxscaffold_2G00116210 Rroxscaffold_5G00354400
rosa_rugosa	Rorug02G0277500 Rorug06G0129600 Rorug07G0322700
rosa_samantha	Rh1BG059500 Rh2AG328000 Rh2BG338000 Rh2CG315100 Rh2DG355100 Rh3DG168700 Rh4AG158500 Rh4DG153200 Rh7AG477100
rosa_wichuraiana	Rw2G026610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	541
AccBSI	CCGCTC	1 cut(s)	366
AccII	CGCG	1 cut(s)	371
AciI	CCGC	8 cut(s)	230, 355, 366, 374, 377, 545, 548, 602
AclWI	GGATC	2 cut(s)	225, 476
AcoI	YGGCCR	2 cut(s)	320, 585
AcyI	GRCGYC	3 cut(s)	281, 542, 591
AdeI	CACNNNGTG	1 cut(s)	497
AfaI	GTAC	1 cut(s)	32
AfeI	AGCGCT	1 cut(s)	432
AfiI	CCNNNNNNNGG	2 cut(s)	290, 467
AflIII	ACRYGT	1 cut(s)	238
AgeI	ACCGGT	1 cut(s)	643
AgsI	TTSAA	3 cut(s)	124, 265, 719
AjiI	CACGTC	1 cut(s)	610
AjnI	CCWGG	2 cut(s)	243, 572
AloI	GAACNNNNNNTCC	2 cut(s)	588, 620
AluBI	AGCT	3 cut(s)	178, 184, 391
AluI	AGCT	3 cut(s)	178, 184, 391
Alw21I	GWGCWC	1 cut(s)	180
Alw26I	GTCTC	2 cut(s)	105, 142
AlwI	GGATC	2 cut(s)	225, 476
Ama87I	CYCGRG	1 cut(s)	406
Aor51HI	AGCGCT	1 cut(s)	432
AoxI	GGCC	5 cut(s)	3, 133, 320, 458, 585
ApeKI	GCWGC	3 cut(s)	298, 385, 388
AscI	GGCGCGCC	1 cut(s)	369
AsiGI	ACCGGT	1 cut(s)	643
AspLEI	GCGC	4 cut(s)	371, 373, 433, 544
AspS9I	GGNCC	3 cut(s)	268, 458, 578
AsuC2I	CCSGG	3 cut(s)	292, 468, 495
AsuHPI	GGTGA	2 cut(s)	220, 658
AvaI	CYCGRG	1 cut(s)	406
AvaII	GGWCC	2 cut(s)	268, 578
BanI	GGYRCC	1 cut(s)	541
BanII	GRGCYC	1 cut(s)	180
BbsI	GAAGAC	1 cut(s)	175
Bbv12I	GWGCWC	1 cut(s)	180
BbvI	GCAGC	3 cut(s)	310, 397, 400
BccI	CCATC	3 cut(s)	74, 449, 643
BciT130I	CCWGG	2 cut(s)	245, 574
BcnI	CCSGG	3 cut(s)	292, 468, 495
BcoDI	GTCTC	2 cut(s)	105, 142
BfaI	CTAG	1 cut(s)	434
BfmI	CTRYAG	1 cut(s)	383
BfoI	RGCGCY	2 cut(s)	434, 545
BglI	GCCNNNNNGGC	1 cut(s)	599
BisI	GCNGC	8 cut(s)	299, 367, 374, 377, 386, 389, 545, 548
BlsI	GCNGC	8 cut(s)	300, 368, 375, 378, 387, 390, 546, 549
Bme1390I	CCNGG	5 cut(s)	245, 292, 468, 495, 574
Bme18I	GGWCC	2 cut(s)	268, 578
BmeT110I	CYCGRG	1 cut(s)	406
BmgBI	CACGTC	1 cut(s)	610
BmgT120I	GGNCC	3 cut(s)	268, 458, 578
BmiI	GGNNCC	4 cut(s)	508, 543, 579, 580
BmrFI	CCNGG	5 cut(s)	245, 292, 468, 495, 574
BmsI	GCATC	1 cut(s)	235
BpiI	GAAGAC	1 cut(s)	175
BplI	GAGNNNNNCTC	2 cut(s)	139, 171
BpuEI	CTTGAG	1 cut(s)	164
BpuMI	CCSGG	3 cut(s)	292, 468, 495
BsaAI	YACGTR	1 cut(s)	239
BsaBI	GATNNNNATC	1 cut(s)	480
BsaHI	GRCGYC	3 cut(s)	281, 542, 591
BsaI	GGTCTC	2 cut(s)	105, 142
BsaJI	CCNNGG	5 cut(s)	130, 291, 573, 582, 711
BsaWI	WCCGGW	3 cut(s)	96, 331, 643
BsaXI	ACNNNNNCTCC	2 cut(s)	588, 618
Bsc4I	CCNNNNNNNGG	2 cut(s)	290, 467
Bse118I	RCCGGY	2 cut(s)	151, 643
Bse8I	GATNNNNATC	1 cut(s)	480
BseBI	CCWGG	2 cut(s)	245, 574
BseDI	CCNNGG	5 cut(s)	130, 291, 573, 582, 711
BseGI	GGATG	7 cut(s)	44, 66, 93, 226, 460, 569, 636
BseJI	GATNNNNATC	1 cut(s)	480
BseLI	CCNNNNNNNGG	2 cut(s)	290, 467
BsePI	GCGCGC	1 cut(s)	369
BseRI	GAGGAG	3 cut(s)	29, 441, 677
BseXI	GCAGC	3 cut(s)	310, 397, 400
Bsh1236I	CGCG	1 cut(s)	371
Bsh1285I	CGRYCG	1 cut(s)	291
BshFI	GGCC	5 cut(s)	5, 135, 322, 460, 587
BshNI	GGYRCC	1 cut(s)	541
BshTI	ACCGGT	1 cut(s)	643
BsiEI	CGRYCG	1 cut(s)	291
BsiHKAI	GWGCWC	1 cut(s)	180
BsiHKCI	CYCGRG	1 cut(s)	406
BsiSI	CCGG	9 cut(s)	97, 152, 291, 323, 332, 467, 494, 594, 644
BsiWI	CGTACG	1 cut(s)	30
BslFI	GGGAC	1 cut(s)	591
BslI	CCNNNNNNNGG	2 cut(s)	290, 467
BsmAI	GTCTC	2 cut(s)	105, 142
BsmFI	GGGAC	1 cut(s)	591
BsnI	GGCC	5 cut(s)	5, 135, 322, 460, 587
Bso31I	GGTCTC	2 cut(s)	105, 142
BsoBI	CYCGRG	1 cut(s)	406
Bsp1286I	GDGCHC	1 cut(s)	180
Bsp143I	GATC	2 cut(s)	217, 481
Bsp19I	CCATGG	1 cut(s)	130
BspACI	CCGC	8 cut(s)	230, 355, 366, 374, 377, 545, 548, 602
BspANI	GGCC	5 cut(s)	5, 135, 322, 460, 587
BspFNI	CGCG	1 cut(s)	371
BspHI	TCATGA	1 cut(s)	108
BspLI	GGNNCC	4 cut(s)	508, 543, 579, 580
BspMAI	CTGCAG	1 cut(s)	387
BspPI	GGATC	2 cut(s)	225, 476
BspQI	GCTCTTC	1 cut(s)	184
BspT107I	GGYRCC	1 cut(s)	541
BspTNI	GGTCTC	2 cut(s)	105, 142
BsrBI	CCGCTC	1 cut(s)	366
BsrFI	RCCGGY	2 cut(s)	151, 643
BssAI	RCCGGY	2 cut(s)	151, 643
BssECI	CCNNGG	5 cut(s)	130, 291, 573, 582, 711
BssHII	GCGCGC	1 cut(s)	369
BssMI	GATC	2 cut(s)	217, 481
BssNI	GRCGYC	3 cut(s)	281, 542, 591
BssT1I	CCWWGG	1 cut(s)	130
Bst2UI	CCWGG	2 cut(s)	245, 574
Bst4CI	ACNGT	1 cut(s)	272
Bst6I	CTCTTC	4 cut(s)	13, 184, 670, 679
BstACI	GRCGYC	3 cut(s)	281, 542, 591
BstBAI	YACGTR	1 cut(s)	239
BstC8I	GCNNGC	1 cut(s)	371
BstDSI	CCRYGG	2 cut(s)	130, 582
BstF5I	GGATG	7 cut(s)	44, 66, 93, 226, 460, 569, 636
BstFNI	CGCG	1 cut(s)	371
BstH2I	RGCGCY	2 cut(s)	434, 545
BstHHI	GCGC	4 cut(s)	371, 373, 433, 544
BstKTI	GATC	2 cut(s)	220, 484
BstMAI	GTCTC	2 cut(s)	105, 142
BstMBI	GATC	2 cut(s)	217, 481
BstMCI	CGRYCG	1 cut(s)	291
BstMWI	GCNNNNNNNGC	4 cut(s)	382, 385, 439, 599
BstNI	CCWGG	2 cut(s)	245, 574
BstSCI	CCNGG	5 cut(s)	243, 290, 466, 493, 572
BstSFI	CTRYAG	1 cut(s)	383
BstUI	CGCG	1 cut(s)	371
BstV1I	GCAGC	3 cut(s)	310, 397, 400
BstV2I	GAAGAC	1 cut(s)	175
BstX2I	RGATCY	1 cut(s)	217
BstYI	RGATCY	1 cut(s)	217
BsuRI	GGCC	5 cut(s)	5, 135, 322, 460, 587
BtgI	CCRYGG	2 cut(s)	130, 582
BtrI	CACGTC	1 cut(s)	610
BtsCI	GGATG	7 cut(s)	44, 66, 93, 226, 460, 569, 636
Cac8I	GCNNGC	1 cut(s)	371
CciI	TCATGA	1 cut(s)	108
CfoI	GCGC	4 cut(s)	371, 373, 433, 544
Cfr10I	RCCGGY	2 cut(s)	151, 643
Cfr13I	GGNCC	3 cut(s)	268, 458, 578
CseI	GACGC	2 cut(s)	289, 599
Csp6I	GTAC	1 cut(s)	31
CspAI	ACCGGT	1 cut(s)	643
CspCI	CAANNNNNGTGG	4 cut(s)	243, 278, 317, 352
CviAII	CATG	3 cut(s)	61, 109, 131
CviQI	GTAC	1 cut(s)	31
DinI	GGCGCC	1 cut(s)	543
DpnI	GATC	2 cut(s)	219, 483
DpnII	GATC	2 cut(s)	217, 481
DraIII	CACNNNGTG	1 cut(s)	497
EaeI	YGGCCR	2 cut(s)	320, 585
Eam1104I	CTCTTC	4 cut(s)	13, 184, 670, 679
EarI	CTCTTC	4 cut(s)	13, 184, 670, 679
Ecl136II	GAGCTC	1 cut(s)	178
Eco130I	CCWWGG	1 cut(s)	130
Eco24I	GRGCYC	1 cut(s)	180
Eco31I	GGTCTC	2 cut(s)	105, 142
Eco47I	GGWCC	2 cut(s)	268, 578
Eco47III	AGCGCT	1 cut(s)	432
Eco53kI	GAGCTC	1 cut(s)	178
Eco88I	CYCGRG	1 cut(s)	406
EcoICRI	GAGCTC	1 cut(s)	178
EcoO109I	RGGNCCY	1 cut(s)	578
EcoRII	CCWGG	2 cut(s)	243, 572
EcoT14I	CCWWGG	1 cut(s)	130
EcoT38I	GRGCYC	1 cut(s)	180
EgeI	GGCGCC	1 cut(s)	543
EheI	GGCGCC	1 cut(s)	543
ErhI	CCWWGG	1 cut(s)	130
FaeI	CATG	3 cut(s)	64, 112, 134
FaiI	YATR	8 cut(s)	50, 52, 62, 110, 132, 145, 344, 730
FaqI	GGGAC	1 cut(s)	591
FatI	CATG	3 cut(s)	60, 108, 130
FauI	CCCGC	1 cut(s)	348
FauNDI	CATATG	1 cut(s)	50
Fnu4HI	GCNGC	8 cut(s)	299, 367, 374, 377, 386, 389, 545, 548
FokI	GGATG	7 cut(s)	31, 53, 80, 213, 467, 556, 643
FriOI	GRGCYC	1 cut(s)	180
Fsp4HI	GCNGC	8 cut(s)	299, 367, 374, 377, 386, 389, 545, 548
FspBI	CTAG	1 cut(s)	434
GlaI	GCGC	4 cut(s)	370, 372, 432, 543
GluI	GCNGC	8 cut(s)	299, 367, 374, 377, 386, 389, 545, 548
HaeII	RGCGCY	2 cut(s)	434, 545
HaeIII	GGCC	5 cut(s)	5, 135, 322, 460, 587
HapII	CCGG	9 cut(s)	97, 152, 291, 323, 332, 467, 494, 594, 644
HgaI	GACGC	2 cut(s)	289, 599
HhaI	GCGC	4 cut(s)	371, 373, 433, 544
Hin1I	GRCGYC	3 cut(s)	281, 542, 591
Hin1II	CATG	3 cut(s)	64, 112, 134
Hin6I	GCGC	4 cut(s)	369, 371, 431, 542
HinP1I	GCGC	4 cut(s)	369, 371, 431, 542
HinfI	GANTC	3 cut(s)	77, 197, 311
HpaII	CCGG	9 cut(s)	97, 152, 291, 323, 332, 467, 494, 594, 644
HphI	GGTGA	2 cut(s)	220, 658
Hpy166II	GTNNAC	1 cut(s)	607
Hpy188I	TCNGA	2 cut(s)	159, 188
Hpy188III	TCNNGA	1 cut(s)	109
Hpy8I	GTNNAC	1 cut(s)	607
Hpy99I	CGWCG	5 cut(s)	205, 208, 283, 593, 614
HpyAV	CCTTC	4 cut(s)	259, 301, 520, 661
HpyCH4III	ACNGT	1 cut(s)	272
HpyCH4IV	ACGT	3 cut(s)	33, 238, 609
HpyCH4V	TGCA	3 cut(s)	54, 385, 500
HpyF10VI	GCNNNNNNNGC	4 cut(s)	382, 385, 439, 599
HpySE526I	ACGT	3 cut(s)	33, 238, 609
Hsp92I	GRCGYC	3 cut(s)	281, 542, 591
Hsp92II	CATG	3 cut(s)	64, 112, 134
HspAI	GCGC	4 cut(s)	369, 371, 431, 542
KasI	GGCGCC	1 cut(s)	541
KflI	GGGWCCC	1 cut(s)	578
Kzo9I	GATC	2 cut(s)	217, 481
LguI	GCTCTTC	1 cut(s)	184
LmnI	GCTCC	2 cut(s)	295, 428
Lsp1109I	GCAGC	3 cut(s)	310, 397, 400
LweI	GCATC	1 cut(s)	235
MaeI	CTAG	1 cut(s)	434
MaeII	ACGT	3 cut(s)	33, 238, 609
MalI	GATC	2 cut(s)	219, 483
MbiI	CCGCTC	1 cut(s)	366
MboI	GATC	2 cut(s)	217, 481
MflI	RGATCY	1 cut(s)	217
MhlI	GDGCHC	1 cut(s)	180
MluCI	AATT	2 cut(s)	212, 620
Mly113I	GGCGCC	1 cut(s)	542
MlyI	GAGTC	2 cut(s)	206, 305
MslI	CAYNNNNRTG	2 cut(s)	49, 612
MspI	CCGG	9 cut(s)	97, 152, 291, 323, 332, 467, 494, 594, 644
MspR9I	CCNGG	5 cut(s)	245, 292, 468, 495, 574
MvaI	CCWGG	2 cut(s)	245, 574
MvnI	CGCG	1 cut(s)	371
MwoI	GCNNNNNNNGC	4 cut(s)	382, 385, 439, 599
NarI	GGCGCC	1 cut(s)	542
NciI	CCSGG	3 cut(s)	292, 468, 495
NcoI	CCATGG	1 cut(s)	130
NdeI	CATATG	1 cut(s)	50
NdeII	GATC	2 cut(s)	217, 481
NlaIII	CATG	3 cut(s)	64, 112, 134
NlaIV	GGNNCC	4 cut(s)	508, 543, 579, 580
NmeAIII	GCCGAG	1 cut(s)	220
PaeR7I	CTCGAG	1 cut(s)	406
PagI	TCATGA	1 cut(s)	108
PalAI	GGCGCGCC	1 cut(s)	369
PauI	GCGCGC	1 cut(s)	369
PciSI	GCTCTTC	1 cut(s)	184
PcsI	WCGNNNNNNNCGW	2 cut(s)	192, 615
PfeI	GAWTC	1 cut(s)	77
Pfl23II	CGTACG	1 cut(s)	30
PinAI	ACCGGT	1 cut(s)	643
PkrI	GCNGC	8 cut(s)	300, 368, 375, 378, 387, 390, 546, 549
PleI	GAGTC	2 cut(s)	205, 305
PluTI	GGCGCC	1 cut(s)	545
PpsI	GAGTC	2 cut(s)	205, 305
Ppu21I	YACGTR	1 cut(s)	239
PpuMI	RGGWCCY	1 cut(s)	578
Psp124BI	GAGCTC	1 cut(s)	180
Psp5II	RGGWCCY	1 cut(s)	578
Psp6I	CCWGG	2 cut(s)	243, 572
PspGI	CCWGG	2 cut(s)	243, 572
PspLI	CGTACG	1 cut(s)	30
PspN4I	GGNNCC	4 cut(s)	508, 543, 579, 580
PspPI	GGNCC	3 cut(s)	268, 458, 578
PspPPI	RGGWCCY	1 cut(s)	578
PspXI	VCTCGAGB	1 cut(s)	406
PstI	CTGCAG	1 cut(s)	387
PsuI	RGATCY	1 cut(s)	217
PteI	GCGCGC	1 cut(s)	369
RsaI	GTAC	1 cut(s)	32
RsaNI	GTAC	1 cut(s)	31
RseI	CAYNNNNRTG	2 cut(s)	49, 612
SacI	GAGCTC	1 cut(s)	180
SapI	GCTCTTC	1 cut(s)	184
SatI	GCNGC	8 cut(s)	299, 367, 374, 377, 386, 389, 545, 548
Sau3AI	GATC	2 cut(s)	217, 481
Sau96I	GGNCC	3 cut(s)	268, 458, 578
SchI	GAGTC	2 cut(s)	206, 305
ScrFI	CCNGG	5 cut(s)	245, 292, 468, 495, 574
SduI	GDGCHC	1 cut(s)	180
SetI	ASST	8 cut(s)	36, 75, 180, 186, 241, 393, 612, 717
SfaNI	GCATC	1 cut(s)	235
SfcI	CTRYAG	1 cut(s)	383
SfoI	GGCGCC	1 cut(s)	543
Sfr274I	CTCGAG	1 cut(s)	406
SgsI	GGCGCGCC	1 cut(s)	369
SinI	GGWCC	2 cut(s)	268, 578
SlaI	CTCGAG	1 cut(s)	406
SmiMI	CAYNNNNRTG	2 cut(s)	49, 612
SmlI	CTYRAG	2 cut(s)	179, 406
SmoI	CTYRAG	2 cut(s)	179, 406
Sse9I	AATT	2 cut(s)	212, 620
SsiI	CCGC	8 cut(s)	230, 355, 366, 374, 377, 545, 548, 602
SspDI	GGCGCC	1 cut(s)	541
SspMI	CTAG	1 cut(s)	434
SstI	GAGCTC	1 cut(s)	180
StyD4I	CCNGG	5 cut(s)	243, 290, 466, 493, 572
StyI	CCWWGG	1 cut(s)	130
TaaI	ACNGT	1 cut(s)	272
TaiI	ACGT	3 cut(s)	36, 241, 612
TaqI	TCGA	5 cut(s)	75, 407, 564, 612, 618
TasI	AATT	2 cut(s)	212, 620
TauI	GCSGC	5 cut(s)	369, 376, 379, 547, 550
TfiI	GAWTC	1 cut(s)	77
TseI	GCWGC	3 cut(s)	298, 385, 388
TspDTI	ATGAA	1 cut(s)	82
TspGWI	ACGGA	1 cut(s)	474
VpaK11BI	GGWCC	2 cut(s)	268, 578
XcmI	CCANNNNNNNNNTGG	1 cut(s)	580
XhoI	CTCGAG	1 cut(s)	406
XspI	CTAG	1 cut(s)	434

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.