Tubulin-folding cofactor
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0354331 RchiOBHm_Chr1g0354381 RchiOBHm_Chr1g0354421 RchiOBHm_Chr1g0354471 RchiOBHm_Chr1g0367371 RchiOBHm_Chr2g0122681 |
| rosa_laevigata | RLG00000029825 RLG00000031606 |
| rosa_multiflora | Rmu_sc0003133.1_g000028 Rmu_sc0007814.1_g000008 Rmu_sc0012562.1_g000010 |
| rosa_roxburghii | Rroxscaffold_1G00020570 Rroxscaffold_4G00298310 Rroxscaffold_4G00301030 Rroxscaffold_6G00399340 Rroxscaffold_6G00418790 |
| rosa_rugosa | Rorug01G0124900 Rorug01G0125000 Rorug01G0125100 Rorug01G0125100 Rorug03G0104000.1 Rorug04G0448100 Rorug05G0112400 Rorug07G0203700 |
| rosa_samantha | Rh1AG252500 Rh1AG252600 Rh1AG252800 Rh1AG253300 Rh1BG224700 Rh1CG237100 Rh1DG252300 Rh6AG288900 |
| rosa_wichuraiana | Rw1G022050 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 587 |
| AccI | GTMKAC | 1 cut(s) | 261 |
| AccII | CGCG | 1 cut(s) | 148 |
| AciI | CCGC | 4 cut(s) | 159, 201, 309, 497 |
| AclWI | GGATC | 1 cut(s) | 265 |
| AcyI | GRCGYC | 1 cut(s) | 584 |
| AfaI | GTAC | 1 cut(s) | 385 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 28, 540 |
| AflII | CTTAAG | 1 cut(s) | 343 |
| AgsI | TTSAA | 3 cut(s) | 48, 404, 451 |
| AluBI | AGCT | 1 cut(s) | 351 |
| AluI | AGCT | 1 cut(s) | 351 |
| Alw26I | GTCTC | 1 cut(s) | 463 |
| AlwI | GGATC | 1 cut(s) | 265 |
| Ama87I | CYCGRG | 1 cut(s) | 539 |
| AoxI | GGCC | 3 cut(s) | 531, 542, 569 |
| AspLEI | GCGC | 1 cut(s) | 150 |
| AspS9I | GGNCC | 2 cut(s) | 531, 542 |
| AsuC2I | CCSGG | 1 cut(s) | 257 |
| AsuHPI | GGTGA | 2 cut(s) | 145, 271 |
| AvaI | CYCGRG | 1 cut(s) | 539 |
| BccI | CCATC | 3 cut(s) | 231, 323, 522 |
| BceAI | ACGGC | 1 cut(s) | 519 |
| BcnI | CCSGG | 1 cut(s) | 257 |
| BcoDI | GTCTC | 1 cut(s) | 463 |
| BfaI | CTAG | 1 cut(s) | 575 |
| BfrI | CTTAAG | 1 cut(s) | 343 |
| BisI | GCNGC | 1 cut(s) | 498 |
| BlsI | GCNGC | 1 cut(s) | 499 |
| Bme1390I | CCNGG | 1 cut(s) | 257 |
| BmeT110I | CYCGRG | 1 cut(s) | 539 |
| BmgT120I | GGNCC | 2 cut(s) | 531, 542 |
| BmrFI | CCNGG | 1 cut(s) | 257 |
| BmsI | GCATC | 2 cut(s) | 341, 446 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 182, 214 |
| BpuEI | CTTGAG | 1 cut(s) | 544 |
| BpuMI | CCSGG | 1 cut(s) | 257 |
| Bsa29I | ATCGAT | 1 cut(s) | 269 |
| BsaHI | GRCGYC | 1 cut(s) | 584 |
| BsaJI | CCNNGG | 1 cut(s) | 538 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 290, 320 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 28, 540 |
| BseCI | ATCGAT | 1 cut(s) | 269 |
| BseDI | CCNNGG | 1 cut(s) | 538 |
| BseGI | GGATG | 2 cut(s) | 548, 554 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 28, 540 |
| BseRI | GAGGAG | 3 cut(s) | 157, 477, 551 |
| Bsh1236I | CGCG | 1 cut(s) | 148 |
| Bsh1285I | CGRYCG | 2 cut(s) | 261, 396 |
| BshFI | GGCC | 3 cut(s) | 533, 544, 571 |
| BshVI | ATCGAT | 1 cut(s) | 269 |
| BsiEI | CGRYCG | 2 cut(s) | 261, 396 |
| BsiHKCI | CYCGRG | 1 cut(s) | 539 |
| BsiSI | CCGG | 1 cut(s) | 257 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 28, 540 |
| BsmAI | GTCTC | 1 cut(s) | 463 |
| BsmBI | CGTCTC | 1 cut(s) | 463 |
| BsnI | GGCC | 3 cut(s) | 533, 544, 571 |
| BsoBI | CYCGRG | 1 cut(s) | 539 |
| Bsp143I | GATC | 3 cut(s) | 270, 393, 444 |
| BspACI | CCGC | 4 cut(s) | 159, 201, 309, 497 |
| BspANI | GGCC | 3 cut(s) | 533, 544, 571 |
| BspDI | ATCGAT | 1 cut(s) | 269 |
| BspFNI | CGCG | 1 cut(s) | 148 |
| BspPI | GGATC | 1 cut(s) | 265 |
| BspTI | CTTAAG | 1 cut(s) | 343 |
| BssECI | CCNNGG | 1 cut(s) | 538 |
| BssMI | GATC | 3 cut(s) | 270, 393, 444 |
| BssNI | GRCGYC | 1 cut(s) | 584 |
| BstACI | GRCGYC | 1 cut(s) | 584 |
| BstAFI | CTTAAG | 1 cut(s) | 343 |
| BstF5I | GGATG | 2 cut(s) | 548, 554 |
| BstFNI | CGCG | 1 cut(s) | 148 |
| BstHHI | GCGC | 1 cut(s) | 150 |
| BstKTI | GATC | 3 cut(s) | 273, 396, 447 |
| BstMAI | GTCTC | 1 cut(s) | 463 |
| BstMBI | GATC | 3 cut(s) | 270, 393, 444 |
| BstMCI | CGRYCG | 2 cut(s) | 261, 396 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 503, 600 |
| BstSCI | CCNGG | 1 cut(s) | 255 |
| BstUI | CGCG | 1 cut(s) | 148 |
| Bsu15I | ATCGAT | 1 cut(s) | 269 |
| BsuRI | GGCC | 3 cut(s) | 533, 544, 571 |
| BsuTUI | ATCGAT | 1 cut(s) | 269 |
| BtgZI | GCGATG | 1 cut(s) | 423 |
| BtsCI | GGATG | 2 cut(s) | 548, 554 |
| CfoI | GCGC | 1 cut(s) | 150 |
| Cfr13I | GGNCC | 2 cut(s) | 531, 542 |
| ClaI | ATCGAT | 1 cut(s) | 269 |
| Csp6I | GTAC | 1 cut(s) | 384 |
| CviAII | CATG | 1 cut(s) | 567 |
| CviJI | RGCY | 7 cut(s) | 32, 351, 506, 533, 544, 571, 578 |
| CviKI_1 | RGCY | 7 cut(s) | 32, 351, 506, 533, 544, 571, 578 |
| CviQI | GTAC | 1 cut(s) | 384 |
| DpnI | GATC | 3 cut(s) | 272, 395, 446 |
| DpnII | GATC | 3 cut(s) | 270, 393, 444 |
| EciI | GGCGGA | 3 cut(s) | 148, 190, 298 |
| Eco88I | CYCGRG | 1 cut(s) | 539 |
| Esp3I | CGTCTC | 1 cut(s) | 463 |
| FaeI | CATG | 1 cut(s) | 570 |
| FaiI | YATR | 2 cut(s) | 568, 613 |
| FatI | CATG | 1 cut(s) | 566 |
| FblI | GTMKAC | 1 cut(s) | 261 |
| Fnu4HI | GCNGC | 1 cut(s) | 498 |
| FokI | GGATG | 2 cut(s) | 535, 541 |
| Fsp4HI | GCNGC | 1 cut(s) | 498 |
| FspBI | CTAG | 1 cut(s) | 575 |
| GlaI | GCGC | 1 cut(s) | 149 |
| GluI | GCNGC | 1 cut(s) | 498 |
| HaeIII | GGCC | 3 cut(s) | 533, 544, 571 |
| HapII | CCGG | 1 cut(s) | 257 |
| HhaI | GCGC | 1 cut(s) | 150 |
| Hin1I | GRCGYC | 1 cut(s) | 584 |
| Hin1II | CATG | 1 cut(s) | 570 |
| Hin6I | GCGC | 1 cut(s) | 148 |
| HinP1I | GCGC | 1 cut(s) | 148 |
| HincII | GTYRAC | 2 cut(s) | 242, 262 |
| HindII | GTYRAC | 2 cut(s) | 242, 262 |
| HinfI | GANTC | 2 cut(s) | 191, 263 |
| HpaII | CCGG | 1 cut(s) | 257 |
| HphI | GGTGA | 2 cut(s) | 145, 271 |
| Hpy166II | GTNNAC | 3 cut(s) | 195, 242, 262 |
| Hpy188I | TCNGA | 2 cut(s) | 322, 339 |
| Hpy188III | TCNNGA | 3 cut(s) | 131, 415, 448 |
| Hpy8I | GTNNAC | 3 cut(s) | 195, 242, 262 |
| Hpy99I | CGWCG | 4 cut(s) | 358, 401, 505, 586 |
| HpyAV | CCTTC | 6 cut(s) | 96, 148, 192, 214, 300, 475 |
| HpyCH4IV | ACGT | 1 cut(s) | 584 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 503, 600 |
| HpySE526I | ACGT | 1 cut(s) | 584 |
| Hsp92I | GRCGYC | 1 cut(s) | 584 |
| Hsp92II | CATG | 1 cut(s) | 570 |
| HspAI | GCGC | 1 cut(s) | 148 |
| Kzo9I | GATC | 3 cut(s) | 270, 393, 444 |
| LpnPI | CCDG | 2 cut(s) | 226, 270 |
| LweI | GCATC | 2 cut(s) | 341, 446 |
| MaeI | CTAG | 1 cut(s) | 575 |
| MaeII | ACGT | 1 cut(s) | 584 |
| MalI | GATC | 3 cut(s) | 272, 395, 446 |
| MboI | GATC | 3 cut(s) | 270, 393, 444 |
| MboII | GAAGA | 3 cut(s) | 366, 499, 502 |
| MluCI | AATT | 1 cut(s) | 4 |
| MlyI | GAGTC | 2 cut(s) | 200, 257 |
| MmeI | TCCRAC | 3 cut(s) | 195, 345, 362 |
| MseI | TTAA | 2 cut(s) | 344, 599 |
| MspCI | CTTAAG | 1 cut(s) | 343 |
| MspI | CCGG | 1 cut(s) | 257 |
| MspR9I | CCNGG | 1 cut(s) | 257 |
| MvnI | CGCG | 1 cut(s) | 148 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 503, 600 |
| NciI | CCSGG | 1 cut(s) | 257 |
| NdeII | GATC | 3 cut(s) | 270, 393, 444 |
| NlaIII | CATG | 1 cut(s) | 570 |
| NmeAIII | GCCGAG | 1 cut(s) | 384 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 516 |
| PkrI | GCNGC | 1 cut(s) | 499 |
| Ple19I | CGATCG | 1 cut(s) | 396 |
| PleI | GAGTC | 2 cut(s) | 199, 257 |
| PpsI | GAGTC | 2 cut(s) | 199, 257 |
| PspPI | GGNCC | 2 cut(s) | 531, 542 |
| PvuI | CGATCG | 1 cut(s) | 396 |
| RsaI | GTAC | 1 cut(s) | 385 |
| RsaNI | GTAC | 1 cut(s) | 384 |
| SalI | GTCGAC | 1 cut(s) | 260 |
| SaqAI | TTAA | 2 cut(s) | 344, 599 |
| SatI | GCNGC | 1 cut(s) | 498 |
| Sau3AI | GATC | 3 cut(s) | 270, 393, 444 |
| Sau96I | GGNCC | 2 cut(s) | 531, 542 |
| SchI | GAGTC | 2 cut(s) | 200, 257 |
| ScrFI | CCNGG | 1 cut(s) | 257 |
| SfaNI | GCATC | 2 cut(s) | 341, 446 |
| SmlI | CTYRAG | 2 cut(s) | 343, 523 |
| SmoI | CTYRAG | 2 cut(s) | 343, 523 |
| Sse9I | AATT | 1 cut(s) | 4 |
| SsiI | CCGC | 4 cut(s) | 159, 201, 309, 497 |
| SspMI | CTAG | 1 cut(s) | 575 |
| StyD4I | CCNGG | 1 cut(s) | 255 |
| TaiI | ACGT | 1 cut(s) | 587 |
| TaqI | TCGA | 7 cut(s) | 132, 261, 269, 297, 327, 392, 416 |
| TasI | AATT | 1 cut(s) | 4 |
| TauI | GCSGC | 1 cut(s) | 500 |
| Tru1I | TTAA | 2 cut(s) | 344, 599 |
| Tru9I | TTAA | 2 cut(s) | 344, 599 |
| TspDTI | ATGAA | 2 cut(s) | 17, 96 |
| TspGWI | ACGGA | 1 cut(s) | 227 |
| Vha464I | CTTAAG | 1 cut(s) | 343 |
| XmiI | GTMKAC | 1 cut(s) | 261 |
| XspI | CTAG | 1 cut(s) | 575 |
| ZraI | GACGTC | 1 cut(s) | 585 |