PWI, domain in splicing factors
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0354331 RchiOBHm_Chr1g0354381 RchiOBHm_Chr1g0354421 RchiOBHm_Chr1g0354471 RchiOBHm_Chr1g0367371 RchiOBHm_Chr2g0122681 |
| rosa_laevigata | RLG00000029825 RLG00000031606 |
| rosa_multiflora | Rmu_sc0003133.1_g000028 Rmu_sc0007814.1_g000008 Rmu_sc0012562.1_g000010 |
| rosa_roxburghii | Rroxscaffold_1G00020570 Rroxscaffold_4G00298310 Rroxscaffold_4G00301030 Rroxscaffold_6G00399340 Rroxscaffold_6G00418790 |
| rosa_rugosa | Rorug01G0124900 Rorug01G0125000 Rorug01G0125100 Rorug01G0125100 Rorug03G0104000.1 Rorug04G0448100 Rorug05G0112400 Rorug07G0203700 |
| rosa_samantha | Rh1AG252500 Rh1AG252600 Rh1AG252800 Rh1AG253300 Rh1BG224700 Rh1CG237100 Rh1DG252300 Rh6AG288900 |
| rosa_wichuraiana | Rw1G022050 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 354 |
| AcsI | RAATTY | 3 cut(s) | 141, 330, 336 |
| AfaI | GTAC | 3 cut(s) | 22, 272, 349 |
| AgsI | TTSAA | 1 cut(s) | 335 |
| AjnI | CCWGG | 2 cut(s) | 47, 228 |
| AluBI | AGCT | 1 cut(s) | 43 |
| AluI | AGCT | 1 cut(s) | 43 |
| AoxI | GGCC | 2 cut(s) | 226, 276 |
| ApoI | RAATTY | 3 cut(s) | 141, 330, 336 |
| AspS9I | GGNCC | 1 cut(s) | 226 |
| AsuHPI | GGTGA | 1 cut(s) | 115 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 27, 59 |
| BciT130I | CCWGG | 2 cut(s) | 49, 230 |
| Bme1390I | CCNGG | 2 cut(s) | 49, 230 |
| BmgT120I | GGNCC | 1 cut(s) | 226 |
| BmrFI | CCNGG | 2 cut(s) | 49, 230 |
| BmsI | GCATC | 1 cut(s) | 22 |
| BsaJI | CCNNGG | 1 cut(s) | 47 |
| BseBI | CCWGG | 2 cut(s) | 49, 230 |
| BseDI | CCNNGG | 1 cut(s) | 47 |
| BseGI | GGATG | 2 cut(s) | 13, 100 |
| BseMII | CTCAG | 1 cut(s) | 30 |
| BshFI | GGCC | 2 cut(s) | 228, 278 |
| BsnI | GGCC | 2 cut(s) | 228, 278 |
| Bsp143I | GATC | 1 cut(s) | 171 |
| BspANI | GGCC | 2 cut(s) | 228, 278 |
| BspCNI | CTCAG | 1 cut(s) | 31 |
| BspHI | TCATGA | 1 cut(s) | 262 |
| BssECI | CCNNGG | 1 cut(s) | 47 |
| BssMI | GATC | 1 cut(s) | 171 |
| BssNAI | GTATAC | 1 cut(s) | 355 |
| Bst1107I | GTATAC | 1 cut(s) | 355 |
| Bst2UI | CCWGG | 2 cut(s) | 49, 230 |
| Bst4CI | ACNGT | 2 cut(s) | 352, 359 |
| BstC8I | GCNNGC | 1 cut(s) | 190 |
| BstDEI | CTNAG | 1 cut(s) | 39 |
| BstF5I | GGATG | 2 cut(s) | 13, 100 |
| BstKTI | GATC | 1 cut(s) | 174 |
| BstMBI | GATC | 1 cut(s) | 171 |
| BstNI | CCWGG | 2 cut(s) | 49, 230 |
| BstNSI | RCATGY | 1 cut(s) | 192 |
| BstSCI | CCNGG | 2 cut(s) | 47, 228 |
| BstZ17I | GTATAC | 1 cut(s) | 355 |
| BsuRI | GGCC | 2 cut(s) | 228, 278 |
| BtsCI | GGATG | 2 cut(s) | 13, 100 |
| BtsIMutI | CAGTG | 1 cut(s) | 164 |
| Cac8I | GCNNGC | 1 cut(s) | 190 |
| CciI | TCATGA | 1 cut(s) | 262 |
| Cfr13I | GGNCC | 1 cut(s) | 226 |
| Csp6I | GTAC | 3 cut(s) | 21, 271, 348 |
| CviAII | CATG | 5 cut(s) | 18, 83, 189, 263, 274 |
| CviJI | RGCY | 3 cut(s) | 43, 228, 278 |
| CviKI_1 | RGCY | 3 cut(s) | 43, 228, 278 |
| CviQI | GTAC | 3 cut(s) | 21, 271, 348 |
| DdeI | CTNAG | 1 cut(s) | 39 |
| DpnI | GATC | 1 cut(s) | 173 |
| DpnII | GATC | 1 cut(s) | 171 |
| DraI | TTTAAA | 1 cut(s) | 55 |
| EcoO109I | RGGNCCY | 1 cut(s) | 226 |
| EcoRII | CCWGG | 2 cut(s) | 47, 228 |
| FaeI | CATG | 5 cut(s) | 21, 86, 192, 266, 277 |
| FaiI | YATR | 8 cut(s) | 19, 84, 190, 222, 256, 264, 275, 355 |
| FatI | CATG | 5 cut(s) | 17, 82, 188, 262, 273 |
| FblI | GTMKAC | 1 cut(s) | 354 |
| FokI | GGATG | 1 cut(s) | 107 |
| HaeIII | GGCC | 2 cut(s) | 228, 278 |
| Hin1II | CATG | 5 cut(s) | 21, 86, 192, 266, 277 |
| HphI | GGTGA | 1 cut(s) | 115 |
| Hpy166II | GTNNAC | 2 cut(s) | 355, 362 |
| Hpy188III | TCNNGA | 1 cut(s) | 263 |
| Hpy8I | GTNNAC | 2 cut(s) | 355, 362 |
| HpyAV | CCTTC | 1 cut(s) | 157 |
| HpyCH4III | ACNGT | 2 cut(s) | 352, 359 |
| HpyCH4V | TGCA | 3 cut(s) | 13, 188, 310 |
| HpyF3I | CTNAG | 1 cut(s) | 39 |
| Hsp92II | CATG | 5 cut(s) | 21, 86, 192, 266, 277 |
| Kzo9I | GATC | 1 cut(s) | 171 |
| LpnPI | CCDG | 6 cut(s) | 34, 61, 160, 215, 242, 296 |
| LweI | GCATC | 1 cut(s) | 22 |
| MaeIII | GTNAC | 1 cut(s) | 34 |
| MalI | GATC | 1 cut(s) | 173 |
| MboI | GATC | 1 cut(s) | 171 |
| MboII | GAAGA | 1 cut(s) | 111 |
| MluCI | AATT | 4 cut(s) | 141, 304, 330, 336 |
| MnlI | CCTC | 1 cut(s) | 217 |
| MseI | TTAA | 3 cut(s) | 54, 207, 249 |
| MspR9I | CCNGG | 2 cut(s) | 49, 230 |
| MvaI | CCWGG | 2 cut(s) | 49, 230 |
| NdeII | GATC | 1 cut(s) | 171 |
| NlaIII | CATG | 5 cut(s) | 21, 86, 192, 266, 277 |
| NspI | RCATGY | 1 cut(s) | 192 |
| PaeI | GCATGC | 1 cut(s) | 192 |
| PagI | TCATGA | 1 cut(s) | 262 |
| Psp6I | CCWGG | 2 cut(s) | 47, 228 |
| PspGI | CCWGG | 2 cut(s) | 47, 228 |
| PspPI | GGNCC | 1 cut(s) | 226 |
| RsaI | GTAC | 3 cut(s) | 22, 272, 349 |
| RsaNI | GTAC | 3 cut(s) | 21, 271, 348 |
| SaqAI | TTAA | 3 cut(s) | 54, 207, 249 |
| Sau3AI | GATC | 1 cut(s) | 171 |
| Sau96I | GGNCC | 1 cut(s) | 226 |
| ScrFI | CCNGG | 2 cut(s) | 49, 230 |
| SetI | ASST | 2 cut(s) | 45, 105 |
| SfaNI | GCATC | 1 cut(s) | 22 |
| SphI | GCATGC | 1 cut(s) | 192 |
| Sse9I | AATT | 4 cut(s) | 141, 304, 330, 336 |
| StyD4I | CCNGG | 2 cut(s) | 47, 228 |
| TaaI | ACNGT | 2 cut(s) | 352, 359 |
| TasI | AATT | 4 cut(s) | 141, 304, 330, 336 |
| TatI | WGTACW | 1 cut(s) | 20 |
| Tru1I | TTAA | 3 cut(s) | 54, 207, 249 |
| Tru9I | TTAA | 3 cut(s) | 54, 207, 249 |
| TscAI | CASTG | 1 cut(s) | 164 |
| TspDTI | ATGAA | 5 cut(s) | 67, 71, 75, 111, 251 |
| TspRI | CASTG | 1 cut(s) | 164 |
| XapI | RAATTY | 3 cut(s) | 141, 330, 336 |
| XceI | RCATGY | 1 cut(s) | 192 |
| XmiI | GTMKAC | 1 cut(s) | 354 |