Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0001502

Physical Location & Seq

Genomic Coordinates Reverse (-)

40444319 .. 40448260

Gene Structure 3942 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0289300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2157 bp

ATGGATTCAAATGTGGTGGTCAGAAGCTCATCACCTCCGTCCCATGAAGGAATCAGAAAGGTACGGACAGCGATAAGGCTGTTCTTAGTGTTGGTGGTGTTTGGAGGGTGTGTTTTGCTCTATGTCATGATGCCCACAAACACATATAAGCAGATATGGATGCCTCGAATCCGAGCCAAGGCCAATTCAAGTACCTATTTTGGTTCACAAGGTGCAAATCTTCTGGTATTCACATTGCCCATTATGTTCATTGCTGTGATGGGGTGTGTGTATCTCCATCTGGGAAAGAAGTTGAATGATTATAAAATAGAAAGCAGTGACGGCAAAACTAACCGTTTAGTTGTATGGAAACAGCCCATGCTGGTGAAAGGTCCTCTAGGCATTGTTTCTGGGATAGAGCTCACCTTCTTCATCATGTATATTGCACTCCTAATTTGGTCTTTCTCCACGTACTTGACCAACGGTTTTGACAAAATTACACCACTATCCGCGGCAAAGAGCCATGAAAAAGTGTGGGAAGCTAAATTGGGGAGTGCATCATTGAGGCTAGGGCTTTTGGGTAACATATGCCTTGCACTTCTCTTCTTTCCGGTTGCTCGTGGCTCGTCGATTTTGCCTCTGTTTGGCCTCACCTCTGAGGCTAGCATCAAGTACCATATATGGCTAGGAAATATAGTCATGGTGCTCTTCACAGCCCATGGAATTTGTTACATCATCTATTGGGCTGTCACAGATCAGATGTTTCAGATGATAAAATGGGAGAAAACTGGCATATCAAACATAGCTGGAGAGCTAGCTTTGCTCTCTGGACTTGCCATGTGGATGACTACAATCCCTCGCATTAGGCGCAAAATGTTTGAGCTCTTCTTCTACACACACTACCTTTACATCCTCTTCATGGTCTTCTTCATCTTTCATGTTGGCGTCTCCTATGCTGGCATTATGCTCCCTGGCTTCTTCCTCTTCCTGGTTGATCGTTACCTACGATTCTTGCAATCCAGGAGAAGAGCGCGTTTGGTCTCTGCCCGAGTCTTGCCGGGTGAATCTTTAGAACTCAACTTCACCAAGAGTCCCGGGTTGAAATACAATCCAACAAGCGTCATGTTCATAAATGTGCCTAGTATTTCCAAGCTGCAATGGCATCCTTTCACTGTTACTTCAAACAGTAATTTGGAGCCAGAGATGATCAGTGTCGTTATCAAAGGTGAAGGAAGTTGGACCAGGAAGCTTTACCAAGTCCTTTCATCGCCTTCTACAAGTGATCGGATTGAGGCTGCAGTTGAAGGGCCTTATGGACCTGATGCAACTCATTTTCTAAGGCATGACAATCTTGTGTTGGTGAGTGGAGGCAGTGGCATTACCCCTTTCATATCCATAATCCGCGAGCTAATTTTTATGTCCACGGCCTTCCAATGCAAGCTTCCGAAAGTGACCTTAATCTGTGCATTCAAACACTCTTCCGACCTCACAATGCTAGACCTGATTCTACCAATGTCTACCACCACACCATATGACATTTCCAATCTCCAGATACAAATTGAGGCATATGTGACTAGAGACACAAAGCCGAAGGATTACTCAATGAACCTCAGAGCCATATGGTTCAAACCCCTTGCAACTGATGAACCCGTTTCAGCCATTTTGGGCGCAAACCACTGGCTCTGGCTTGGCCTCATCATAGCATCTTCCTTCATGATGTTCCTCATCTTGATTGGTATCATCACTAGATACTACATTTATCCGATCGAGCACAGTTCCTATAAGATTTTTTCGTTTCCTTTGAGGGCTCTGTTTAATATGTTGGCTATATGTATCTCCATAGCTGCAACAGCTAGTGCAGCAGTGTTGTGGAACAAGAGAAGTAATGCCAAGGAGTTAAAGCAGGTTCAGCTCATAGAAGCCTCATCACCAAGGGGTTCGGAGGTTTATAATGCAGAAAGAGAGTTGGAAAGCCTTCCTCAACAGTCTCTTGTCCAAGCAACCAATGTGCACTATGGTCAAAGACCTGACCTCAAGAGGATTCTACTCGAGTTCAAAGGATCAAGTGTTGGGGTTCTTGCTAGCGGACCGAAGAAGATGAGGCATGAGGTTGCAACCATTTGTTCATCTGGTTTGTCAGAAAATATGCATTTTGAGTCCATCAGCTTTAGCTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arv1

Protein Analysis

718

Amino Acids

80.86

Weight (kDa)

9.52

Isoelectric Point (pI)

41.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ferric_reduct	PF01794	183 - 303	1.1e-20	Ferric reductase like transmembrane component
FAD_binding_8	PF08022	337 - 434	2.6e-23	FAD-binding domain
NAD_binding_6	PF08030	441 - 701	4.4e-21	Ferric reductase NAD binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001502)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G01020 AT1G01020 AT1G01020 AT1G01020 AT1G01020 AT1G01020 AT4G01510 AT4G01510 AT4G01510 AT4G01510 AT4G01510 AT4G01510 AT4G01510 AT4G01510 AT4G01510
fragaria_vesca	FvH4_7g17940 FvH4_7g17940 FvH4_7g17940 FvH4_7g17940
malus_domestica	MD01G1091900.v1.1 MD07G1162500.v1.1 MD07G1162600.v1.1
prunus_persica	Prupe.2G201100_v2.0.a1 Prupe.2G201100_v2.0.a1
pyrus_communis	pycom01g11580 pycom07g15760
rosa_chinensis	RchiOBHm_Chr1g0333691 RchiOBHm_Chr1g0361381 RchiOBHm_Chr1g0361671
rosa_multiflora	Rmu_sc0002621.1_g000016
rosa_roxburghii	Rroxscaffold_177G00434170 Rroxscaffold_4G00294960 Rroxscaffold_4G00295000
rosa_rugosa	Rorug01G0289100 Rorug01G0289200 Rorug01G0289300 Rorug07G0273800
rosa_samantha	Rh1AG112400 Rh1AG133400 Rh1AG134200 Rh1AG300000 Rh1CG065800 Rh1CG066000 Rh1CG127700 Rh1CG281300 Rh1CG282000 Rh2AG320800 Rh2AG329800 Rh4AG149900 Rh4CG344500 Rh6AG000700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	303, 1929
Acc36I	ACCTGC	1 cut(s)	1873
AccI	GTMKAC	1 cut(s)	1496
AccII	CGCG	3 cut(s)	491, 1012, 1383
AciI	CCGC	4 cut(s)	489, 491, 1381, 2064
AclWI	GGATC	1 cut(s)	2047
AcsI	RAATTY	1 cut(s)	702
AcyI	GRCGYC	1 cut(s)	924
AdeI	CACNNNGTG	1 cut(s)	212
AfaI	GTAC	4 cut(s)	63, 193, 452, 653
AfiI	CCNNNNNNNGG	4 cut(s)	178, 623, 898, 967
AgsI	TTSAA	9 cut(s)	9, 189, 295, 1081, 1161, 1283, 1450, 1606, 2035
AjnI	CCWGG	4 cut(s)	949, 966, 998, 1220
AjuI	GAANNNNNNNTTGG	2 cut(s)	1404, 1436
Alw21I	GWGCWC	5 cut(s)	402, 687, 864, 1752, 1992
Alw26I	GTCTC	4 cut(s)	931, 1024, 1551, 1971
Alw44I	GTGCAC	1 cut(s)	1988
AlwI	GGATC	1 cut(s)	2047
Ama87I	CYCGRG	3 cut(s)	1026, 1073, 2027
AoxI	GGCC	5 cut(s)	180, 625, 1286, 1404, 1669
ApaLI	GTGCAC	1 cut(s)	1988
ApeKI	GCWGC	4 cut(s)	1132, 1274, 1823, 1838
ApoI	RAATTY	1 cut(s)	702
Asp700I	GAANNNNTTC	1 cut(s)	1953
AspLEI	GCGC	3 cut(s)	849, 1012, 1649
AspS9I	GGNCC	5 cut(s)	371, 1218, 1286, 1295, 2066
AsuC2I	CCSGG	3 cut(s)	1038, 1074, 1075
AsuHPI	GGTGA	9 cut(s)	24, 376, 394, 622, 1052, 1054, 1217, 1351, 1899
AsuNHI	GCTAGC	3 cut(s)	641, 793, 2060
AvaI	CYCGRG	3 cut(s)	1026, 1073, 2027
AvaII	GGWCC	4 cut(s)	371, 1218, 1295, 2066
BaeGI	GKGCMC	1 cut(s)	1992
BanII	GRGCYC	3 cut(s)	402, 864, 1789
BauI	CACGAG	1 cut(s)	597
BbsI	GAAGAC	1 cut(s)	895
Bbv12I	GWGCWC	5 cut(s)	402, 687, 864, 1752, 1992
BbvI	GCAGC	4 cut(s)	1119, 1261, 1810, 1850
BccI	CCATC	3 cut(s)	253, 285, 2147
BceAI	ACGGC	2 cut(s)	337, 1419
BciT130I	CCWGG	4 cut(s)	951, 968, 1000, 1222
BclI	TGATCA	1 cut(s)	1185
BcnI	CCSGG	3 cut(s)	1038, 1074, 1075
BcoDI	GTCTC	4 cut(s)	931, 1024, 1551, 1971
BfmI	CTRYAG	1 cut(s)	1275
BfuAI	ACCTGC	1 cut(s)	1873
BisI	GCNGC	5 cut(s)	492, 1133, 1275, 1824, 1839
BlsI	GCNGC	5 cut(s)	493, 1134, 1276, 1825, 1840
Bme1390I	CCNGG	7 cut(s)	951, 968, 1000, 1038, 1074, 1075, 1222
Bme18I	GGWCC	4 cut(s)	371, 1218, 1295, 2066
BmeT110I	CYCGRG	3 cut(s)	1026, 1073, 2027
BmgT120I	GGNCC	5 cut(s)	371, 1218, 1286, 1295, 2066
BmiI	GGNNCC	1 cut(s)	1176
BmrFI	CCNGG	7 cut(s)	951, 968, 1000, 1038, 1074, 1075, 1222
BmsI	GCATC	7 cut(s)	120, 150, 545, 654, 1150, 1291, 1691
BmtI	GCTAGC	3 cut(s)	645, 797, 2064
BpiI	GAAGAC	1 cut(s)	895
BpmI	CTGGAG	2 cut(s)	807, 1511
BpuEI	CTTGAG	1 cut(s)	1997
BpuMI	CCSGG	3 cut(s)	1038, 1074, 1075
BsaAI	YACGTR	1 cut(s)	450
BsaBI	GATNNNNATC	1 cut(s)	1715
BsaHI	GRCGYC	1 cut(s)	924
BsaI	GGTCTC	1 cut(s)	1024
BsaJI	CCNNGG	8 cut(s)	177, 489, 697, 949, 1073, 1401, 1869, 1910
BsaWI	WCCGGW	1 cut(s)	589
BsaXI	ACNNNNNCTCC	2 cut(s)	96, 126
Bsc4I	CCNNNNNNNGG	4 cut(s)	178, 623, 898, 967
Bse1I	ACTGG	2 cut(s)	772, 1661
Bse3DI	GCAATG	3 cut(s)	233, 249, 1142
Bse8I	GATNNNNATC	1 cut(s)	1715
BseBI	CCWGG	4 cut(s)	951, 968, 1000, 1222
BseDI	CCNNGG	8 cut(s)	177, 489, 697, 949, 1073, 1401, 1869, 1910
BseGI	GGATG	4 cut(s)	165, 828, 888, 1141
BseJI	GATNNNNATC	1 cut(s)	1715
BseLI	CCNNNNNNNGG	4 cut(s)	178, 623, 898, 967
BseMI	GCAATG	3 cut(s)	233, 249, 1142
BseMII	CTCAG	2 cut(s)	627, 1603
BseNI	ACTGG	2 cut(s)	772, 1661
BseSI	GKGCMC	1 cut(s)	1992
BseXI	GCAGC	4 cut(s)	1119, 1261, 1810, 1850
BsgI	GTGCAG	1 cut(s)	1857
Bsh1236I	CGCG	3 cut(s)	491, 1012, 1383
Bsh1285I	CGRYCG	1 cut(s)	1746
BshFI	GGCC	5 cut(s)	182, 627, 1288, 1406, 1671
BsiEI	CGRYCG	1 cut(s)	1746
BsiHKAI	GWGCWC	5 cut(s)	402, 687, 864, 1752, 1992
BsiHKCI	CYCGRG	3 cut(s)	1026, 1073, 2027
BsiSI	CCGG	3 cut(s)	590, 1037, 1074
BslFI	GGGAC	2 cut(s)	25, 1056
BslI	CCNNNNNNNGG	4 cut(s)	178, 623, 898, 967
BsmAI	GTCTC	4 cut(s)	931, 1024, 1551, 1971
BsmBI	CGTCTC	1 cut(s)	931
BsmFI	GGGAC	2 cut(s)	25, 1056
BsmI	GAATGC	1 cut(s)	1445
BsnI	GGCC	5 cut(s)	182, 627, 1288, 1406, 1671
Bso31I	GGTCTC	1 cut(s)	1024
BsoBI	CYCGRG	3 cut(s)	1026, 1073, 2027
Bsp1286I	GDGCHC	6 cut(s)	402, 687, 864, 1752, 1789, 1992
Bsp143I	GATC	6 cut(s)	733, 973, 1185, 1261, 1743, 2039
Bsp19I	CCATGG	1 cut(s)	697
BspACI	CCGC	4 cut(s)	489, 491, 1381, 2064
BspANI	GGCC	5 cut(s)	182, 627, 1288, 1406, 1671
BspCNI	CTCAG	2 cut(s)	628, 1602
BspFNI	CGCG	3 cut(s)	491, 1012, 1383
BspHI	TCATGA	2 cut(s)	126, 1692
BspLI	GGNNCC	1 cut(s)	1176
BspMAI	CTGCAG	1 cut(s)	1279
BspMI	ACCTGC	1 cut(s)	1873
BspOI	GCTAGC	3 cut(s)	645, 797, 2064
BspPI	GGATC	1 cut(s)	2047
BspQI	GCTCTTC	3 cut(s)	692, 869, 1000
BspTNI	GGTCTC	1 cut(s)	1024
BsrDI	GCAATG	3 cut(s)	233, 249, 1142
BsrI	ACTGG	2 cut(s)	772, 1661
BssECI	CCNNGG	8 cut(s)	177, 489, 697, 949, 1073, 1401, 1869, 1910
BssMI	GATC	6 cut(s)	733, 973, 1185, 1261, 1743, 2039
BssNI	GRCGYC	1 cut(s)	924
BssSI	CACGAG	1 cut(s)	597
BssT1I	CCWWGG	4 cut(s)	177, 697, 1869, 1910
Bst2BI	CACGAG	1 cut(s)	597
Bst2UI	CCWGG	4 cut(s)	951, 968, 1000, 1222
Bst4CI	ACNGT	6 cut(s)	335, 464, 1153, 1166, 1754, 1965
Bst6I	CTCTTC	7 cut(s)	587, 692, 869, 899, 968, 1000, 1462
BstACI	GRCGYC	1 cut(s)	924
BstBAI	YACGTR	1 cut(s)	450
BstC8I	GCNNGC	6 cut(s)	643, 795, 937, 1385, 1418, 2062
BstDEI	CTNAG	4 cut(s)	85, 636, 1316, 1589
BstDSI	CCRYGG	3 cut(s)	489, 697, 1401
BstF5I	GGATG	4 cut(s)	165, 828, 888, 1141
BstFNI	CGCG	3 cut(s)	491, 1012, 1383
BstHHI	GCGC	3 cut(s)	849, 1012, 1649
BstKTI	GATC	6 cut(s)	736, 976, 1188, 1264, 1746, 2042
BstMAI	GTCTC	4 cut(s)	931, 1024, 1551, 1971
BstMBI	GATC	6 cut(s)	733, 973, 1185, 1261, 1743, 2039
BstMCI	CGRYCG	1 cut(s)	1746
BstMWI	GCNNNNNNNGC	7 cut(s)	321, 799, 846, 1138, 1829, 1838, 1888
BstNI	CCWGG	4 cut(s)	951, 968, 1000, 1222
BstSCI	CCNGG	7 cut(s)	949, 966, 998, 1036, 1072, 1073, 1220
BstSFI	CTRYAG	1 cut(s)	1275
BstSLI	GKGCMC	1 cut(s)	1992
BstUI	CGCG	3 cut(s)	491, 1012, 1383
BstV1I	GCAGC	4 cut(s)	1119, 1261, 1810, 1850
BstV2I	GAAGAC	1 cut(s)	895
BsuRI	GGCC	5 cut(s)	182, 627, 1288, 1406, 1671
BtgI	CCRYGG	3 cut(s)	489, 697, 1401
BtgZI	GCGATG	1 cut(s)	1230
BtsCI	GGATG	4 cut(s)	165, 828, 888, 1141
BtsI	GCAGTG	3 cut(s)	322, 1357, 1848
BtsIMutI	CAGTG	6 cut(s)	322, 1149, 1195, 1357, 1654, 1848
BveI	ACCTGC	1 cut(s)	1873
Cac8I	GCNNGC	6 cut(s)	643, 795, 937, 1385, 1418, 2062
CciI	TCATGA	2 cut(s)	126, 1692
CfoI	GCGC	3 cut(s)	849, 1012, 1649
Cfr13I	GGNCC	5 cut(s)	371, 1218, 1286, 1295, 2066
Cfr42I	CCGCGG	1 cut(s)	492
Cfr9I	CCCGGG	1 cut(s)	1073
CpoI	CGGWCCG	1 cut(s)	2066
CseI	GACGC	2 cut(s)	913, 1087
Csp6I	GTAC	4 cut(s)	62, 192, 451, 652
CspCI	CAANNNNNGTGG	1 cut(s)	32
CspI	CGGWCCG	1 cut(s)	2066
CviQI	GTAC	4 cut(s)	62, 192, 451, 652
DdeI	CTNAG	4 cut(s)	85, 636, 1316, 1589
DpnI	GATC	6 cut(s)	735, 975, 1187, 1263, 1745, 2041
DpnII	GATC	6 cut(s)	733, 973, 1185, 1261, 1743, 2039
DraIII	CACNNNGTG	1 cut(s)	212
Eam1104I	CTCTTC	7 cut(s)	587, 692, 869, 899, 968, 1000, 1462
EarI	CTCTTC	7 cut(s)	587, 692, 869, 899, 968, 1000, 1462
Ecl136II	GAGCTC	2 cut(s)	400, 862
Eco130I	CCWWGG	4 cut(s)	177, 697, 1869, 1910
Eco24I	GRGCYC	3 cut(s)	402, 864, 1789
Eco31I	GGTCTC	1 cut(s)	1024
Eco47I	GGWCC	4 cut(s)	371, 1218, 1295, 2066
Eco53kI	GAGCTC	2 cut(s)	400, 862
Eco88I	CYCGRG	3 cut(s)	1026, 1073, 2027
EcoICRI	GAGCTC	2 cut(s)	400, 862
EcoO109I	RGGNCCY	2 cut(s)	371, 1286
EcoRII	CCWGG	4 cut(s)	949, 966, 998, 1220
EcoT14I	CCWWGG	4 cut(s)	177, 697, 1869, 1910
EcoT22I	ATGCAT	1 cut(s)	2130
EcoT38I	GRGCYC	3 cut(s)	402, 864, 1789
ErhI	CCWWGG	4 cut(s)	177, 697, 1869, 1910
Esp3I	CGTCTC	1 cut(s)	931
FaqI	GGGAC	2 cut(s)	25, 1056
FauNDI	CATATG	4 cut(s)	566, 1510, 1546, 1598
FbaI	TGATCA	1 cut(s)	1185
FblI	GTMKAC	1 cut(s)	1496
Fnu4HI	GCNGC	5 cut(s)	492, 1133, 1275, 1824, 1839
FokI	GGATG	4 cut(s)	172, 835, 875, 1128
FriOI	GRGCYC	3 cut(s)	402, 864, 1789
Fsp4HI	GCNGC	5 cut(s)	492, 1133, 1275, 1824, 1839
GlaI	GCGC	3 cut(s)	848, 1011, 1648
GluI	GCNGC	5 cut(s)	492, 1133, 1275, 1824, 1839
GsuI	CTGGAG	2 cut(s)	807, 1511
HaeIII	GGCC	5 cut(s)	182, 627, 1288, 1406, 1671
HapII	CCGG	3 cut(s)	590, 1037, 1074
HgaI	GACGC	2 cut(s)	913, 1087
HhaI	GCGC	3 cut(s)	849, 1012, 1649
Hin1I	GRCGYC	1 cut(s)	924
Hin6I	GCGC	3 cut(s)	847, 1010, 1647
HinP1I	GCGC	3 cut(s)	847, 1010, 1647
HindIII	AAGCTT	2 cut(s)	1226, 1418
HpaII	CCGG	3 cut(s)	590, 1037, 1074
HphI	GGTGA	9 cut(s)	24, 376, 394, 622, 1052, 1054, 1217, 1351, 1899
Hpy166II	GTNNAC	4 cut(s)	206, 1401, 1497, 1990
Hpy188III	TCNNGA	6 cut(s)	127, 807, 1528, 1693, 1708, 2014
Hpy8I	GTNNAC	4 cut(s)	206, 1401, 1497, 1990
Hpy99I	CGWCG	1 cut(s)	610
HpyAV	CCTTC	9 cut(s)	41, 415, 1202, 1260, 1277, 1417, 1564, 1699, 1964
HpyCH4III	ACNGT	6 cut(s)	335, 464, 1153, 1166, 1754, 1965
HpyCH4IV	ACGT	1 cut(s)	449
HpyF10VI	GCNNNNNNNGC	7 cut(s)	321, 799, 846, 1138, 1829, 1838, 1888
HpyF3I	CTNAG	4 cut(s)	85, 636, 1316, 1589
HpySE526I	ACGT	1 cut(s)	449
Hsp92I	GRCGYC	1 cut(s)	924
HspAI	GCGC	3 cut(s)	847, 1010, 1647
Ksp22I	TGATCA	1 cut(s)	1185
KspI	CCGCGG	1 cut(s)	492
Kzo9I	GATC	6 cut(s)	733, 973, 1185, 1261, 1743, 2039
LguI	GCTCTTC	3 cut(s)	692, 869, 1000
LmnI	GCTCC	2 cut(s)	951, 1174
Lsp1109I	GCAGC	4 cut(s)	1119, 1261, 1810, 1850
LweI	GCATC	7 cut(s)	120, 150, 545, 654, 1150, 1291, 1691
MaeII	ACGT	1 cut(s)	449
MaeIII	GTNAC	8 cut(s)	317, 560, 707, 727, 977, 1153, 1429, 1549
MalI	GATC	6 cut(s)	735, 975, 1187, 1263, 1745, 2041
MboI	GATC	6 cut(s)	733, 973, 1185, 1261, 1743, 2039
MhlI	GDGCHC	6 cut(s)	402, 687, 864, 1752, 1789, 1992
MluCI	AATT	8 cut(s)	184, 432, 474, 524, 702, 1168, 1389, 1536
MlyI	GAGTC	3 cut(s)	1038, 1078, 2144
MmeI	TCCRAC	4 cut(s)	1115, 1196, 1485, 1926
Mph1103I	ATGCAT	1 cut(s)	2130
MroXI	GAANNNNTTC	1 cut(s)	1953
MseI	TTAA	3 cut(s)	1436, 1794, 1877
MslI	CAYNNNNRTG	4 cut(s)	254, 362, 821, 1112
MspA1I	CMGCKG	1 cut(s)	491
MspI	CCGG	3 cut(s)	590, 1037, 1074
MspR9I	CCNGG	7 cut(s)	951, 968, 1000, 1038, 1074, 1075, 1222
Mva1269I	GAATGC	1 cut(s)	1445
MvaI	CCWGG	4 cut(s)	951, 968, 1000, 1222
MvnI	CGCG	3 cut(s)	491, 1012, 1383
MwoI	GCNNNNNNNGC	7 cut(s)	321, 799, 846, 1138, 1829, 1838, 1888
NciI	CCSGG	3 cut(s)	1038, 1074, 1075
NcoI	CCATGG	1 cut(s)	697
NdeI	CATATG	4 cut(s)	566, 1510, 1546, 1598
NdeII	GATC	6 cut(s)	733, 973, 1185, 1261, 1743, 2039
NheI	GCTAGC	3 cut(s)	641, 793, 2060
NlaIV	GGNNCC	1 cut(s)	1176
NmuCI	GTSAC	4 cut(s)	317, 727, 1429, 1549
NsiI	ATGCAT	1 cut(s)	2130
PaeR7I	CTCGAG	1 cut(s)	2027
PagI	TCATGA	2 cut(s)	126, 1692
PciSI	GCTCTTC	3 cut(s)	692, 869, 1000
PcsI	WCGNNNNNNNCGW	1 cut(s)	982
PctI	GAATGC	1 cut(s)	1445
PdmI	GAANNNNTTC	1 cut(s)	1953
PfeI	GAWTC	7 cut(s)	5, 51, 168, 987, 1043, 1483, 2020
PfoI	TCCNGGA	1 cut(s)	998
PkrI	GCNGC	5 cut(s)	493, 1134, 1276, 1825, 1840
Ple19I	CGATCG	1 cut(s)	1746
PleI	GAGTC	3 cut(s)	1037, 1077, 2143
PpsI	GAGTC	3 cut(s)	1037, 1077, 2143
Ppu21I	YACGTR	1 cut(s)	450
PpuMI	RGGWCCY	1 cut(s)	371
PsiI	TTATAA	2 cut(s)	303, 1929
Psp124BI	GAGCTC	2 cut(s)	402, 864
Psp5II	RGGWCCY	1 cut(s)	371
Psp6I	CCWGG	4 cut(s)	949, 966, 998, 1220
PspGI	CCWGG	4 cut(s)	949, 966, 998, 1220
PspN4I	GGNNCC	1 cut(s)	1176
PspPI	GGNCC	5 cut(s)	371, 1218, 1286, 1295, 2066
PspPPI	RGGWCCY	1 cut(s)	371
PspXI	VCTCGAGB	1 cut(s)	2027
PstI	CTGCAG	1 cut(s)	1279
PvuI	CGATCG	1 cut(s)	1746
RsaI	GTAC	4 cut(s)	63, 193, 452, 653
RsaNI	GTAC	4 cut(s)	62, 192, 451, 652
RseI	CAYNNNNRTG	4 cut(s)	254, 362, 821, 1112
Rsr2I	CGGWCCG	1 cut(s)	2066
RsrII	CGGWCCG	1 cut(s)	2066
SacI	GAGCTC	2 cut(s)	402, 864
SacII	CCGCGG	1 cut(s)	492
SapI	GCTCTTC	3 cut(s)	692, 869, 1000
SaqAI	TTAA	3 cut(s)	1436, 1794, 1877
SatI	GCNGC	5 cut(s)	492, 1133, 1275, 1824, 1839
Sau3AI	GATC	6 cut(s)	733, 973, 1185, 1261, 1743, 2039
Sau96I	GGNCC	5 cut(s)	371, 1218, 1286, 1295, 2066
SchI	GAGTC	3 cut(s)	1038, 1078, 2144
ScrFI	CCNGG	7 cut(s)	951, 968, 1000, 1038, 1074, 1075, 1222
SduI	GDGCHC	6 cut(s)	402, 687, 864, 1752, 1789, 1992
SfaNI	GCATC	7 cut(s)	120, 150, 545, 654, 1150, 1291, 1691
SfcI	CTRYAG	1 cut(s)	1275
Sfr274I	CTCGAG	1 cut(s)	2027
Sfr303I	CCGCGG	1 cut(s)	492
SgrBI	CCGCGG	1 cut(s)	492
SinI	GGWCC	4 cut(s)	371, 1218, 1295, 2066
SlaI	CTCGAG	1 cut(s)	2027
SmaI	CCCGGG	1 cut(s)	1075
SmiMI	CAYNNNNRTG	4 cut(s)	254, 362, 821, 1112
SmlI	CTYRAG	2 cut(s)	2012, 2027
SmoI	CTYRAG	2 cut(s)	2012, 2027
Sse9I	AATT	8 cut(s)	184, 432, 474, 524, 702, 1168, 1389, 1536
SsiI	CCGC	4 cut(s)	489, 491, 1381, 2064
SstI	GAGCTC	2 cut(s)	402, 864
StyD4I	CCNGG	7 cut(s)	949, 966, 998, 1036, 1072, 1073, 1220
StyI	CCWWGG	4 cut(s)	177, 697, 1869, 1910
TaaI	ACNGT	6 cut(s)	335, 464, 1153, 1166, 1754, 1965
TaiI	ACGT	1 cut(s)	452
TaqI	TCGA	4 cut(s)	166, 608, 1746, 2028
TaqII	GACCGA	1 cut(s)	2083
TasI	AATT	8 cut(s)	184, 432, 474, 524, 702, 1168, 1389, 1536
TauI	GCSGC	1 cut(s)	494
TfiI	GAWTC	7 cut(s)	5, 51, 168, 987, 1043, 1483, 2020
Tru1I	TTAA	3 cut(s)	1436, 1794, 1877
Tru9I	TTAA	3 cut(s)	1436, 1794, 1877
TscAI	CASTG	6 cut(s)	322, 1156, 1195, 1357, 1661, 1848
TseFI	GTSAC	4 cut(s)	317, 727, 1429, 1549
TseI	GCWGC	4 cut(s)	1132, 1274, 1823, 1838
Tsp45I	GTSAC	4 cut(s)	317, 727, 1429, 1549
TspGWI	ACGGA	2 cut(s)	27, 79
TspMI	CCCGGG	1 cut(s)	1073
TspRI	CASTG	6 cut(s)	322, 1156, 1195, 1357, 1661, 1848
VneI	GTGCAC	1 cut(s)	1988
VpaK11BI	GGWCC	4 cut(s)	371, 1218, 1295, 2066
XapI	RAATTY	1 cut(s)	702
XhoI	CTCGAG	1 cut(s)	2027
XmaI	CCCGGG	1 cut(s)	1073
XmiI	GTMKAC	1 cut(s)	1496
XmnI	GAANNNNTTC	1 cut(s)	1953
Zsp2I	ATGCAT	1 cut(s)	2130

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.