SWI SNF complex subunit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G01020 AT1G01020 AT1G01020 AT1G01020 AT1G01020 AT1G01020 AT4G01510 AT4G01510 AT4G01510 AT4G01510 AT4G01510 AT4G01510 AT4G01510 AT4G01510 AT4G01510 |
| fragaria_vesca | FvH4_7g17940 FvH4_7g17940 FvH4_7g17940 FvH4_7g17940 |
| malus_domestica | MD01G1091900.v1.1 MD07G1162500.v1.1 MD07G1162600.v1.1 |
| prunus_persica | Prupe.2G201100_v2.0.a1 Prupe.2G201100_v2.0.a1 |
| pyrus_communis | pycom01g11580 pycom07g15760 |
| rosa_chinensis | RchiOBHm_Chr1g0333691 RchiOBHm_Chr1g0361381 RchiOBHm_Chr1g0361671 |
| rosa_multiflora | Rmu_sc0002621.1_g000016 |
| rosa_roxburghii | Rroxscaffold_177G00434170 Rroxscaffold_4G00294960 Rroxscaffold_4G00295000 |
| rosa_rugosa | Rorug01G0289100 Rorug01G0289200 Rorug01G0289300 Rorug07G0273800 |
| rosa_samantha | Rh1AG112400 Rh1AG133400 Rh1AG134200 Rh1AG300000 Rh1CG065800 Rh1CG066000 Rh1CG127700 Rh1CG281300 Rh1CG282000 Rh2AG320800 Rh2AG329800 Rh4AG149900 Rh4CG344500 Rh6AG000700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 44 |
| AfaI | GTAC | 1 cut(s) | 173 |
| AjnI | CCWGG | 1 cut(s) | 157 |
| AluBI | AGCT | 2 cut(s) | 108, 257 |
| AluI | AGCT | 2 cut(s) | 108, 257 |
| Alw26I | GTCTC | 2 cut(s) | 28, 75 |
| Ama87I | CYCGRG | 1 cut(s) | 6 |
| AoxI | GGCC | 1 cut(s) | 81 |
| AspLEI | GCGC | 2 cut(s) | 31, 190 |
| AspS9I | GGNCC | 1 cut(s) | 155 |
| AvaI | CYCGRG | 1 cut(s) | 6 |
| AvaII | GGWCC | 1 cut(s) | 155 |
| BceAI | ACGGC | 1 cut(s) | 74 |
| BciT130I | CCWGG | 1 cut(s) | 159 |
| BciVI | GTATCC | 1 cut(s) | 155 |
| BclI | TGATCA | 1 cut(s) | 217 |
| BcoDI | GTCTC | 2 cut(s) | 28, 75 |
| BfuI | GTATCC | 1 cut(s) | 155 |
| Bme1390I | CCNGG | 1 cut(s) | 159 |
| Bme18I | GGWCC | 1 cut(s) | 155 |
| BmeT110I | CYCGRG | 1 cut(s) | 6 |
| BmgT120I | GGNCC | 1 cut(s) | 155 |
| BmrFI | CCNGG | 1 cut(s) | 159 |
| BpmI | CTGGAG | 1 cut(s) | 237 |
| BpuEI | CTTGAG | 1 cut(s) | 196 |
| BsaI | GGTCTC | 1 cut(s) | 75 |
| BseBI | CCWGG | 1 cut(s) | 159 |
| BseGI | GGATG | 1 cut(s) | 235 |
| BseMII | CTCAG | 1 cut(s) | 86 |
| BshFI | GGCC | 1 cut(s) | 83 |
| BsiHKCI | CYCGRG | 1 cut(s) | 6 |
| BsmAI | GTCTC | 2 cut(s) | 28, 75 |
| BsmBI | CGTCTC | 1 cut(s) | 28 |
| BsnI | GGCC | 1 cut(s) | 83 |
| Bso31I | GGTCTC | 1 cut(s) | 75 |
| BsoBI | CYCGRG | 1 cut(s) | 6 |
| Bsp143I | GATC | 2 cut(s) | 21, 217 |
| BspACI | CCGC | 1 cut(s) | 44 |
| BspANI | GGCC | 1 cut(s) | 83 |
| BspCNI | CTCAG | 1 cut(s) | 85 |
| BspTNI | GGTCTC | 1 cut(s) | 75 |
| BssMI | GATC | 2 cut(s) | 21, 217 |
| Bst2UI | CCWGG | 1 cut(s) | 159 |
| Bst6I | CTCTTC | 1 cut(s) | 145 |
| BstDEI | CTNAG | 1 cut(s) | 72 |
| BstF5I | GGATG | 1 cut(s) | 235 |
| BstHHI | GCGC | 2 cut(s) | 31, 190 |
| BstKTI | GATC | 2 cut(s) | 24, 220 |
| BstMAI | GTCTC | 2 cut(s) | 28, 75 |
| BstMBI | GATC | 2 cut(s) | 21, 217 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 194 |
| BstNI | CCWGG | 1 cut(s) | 159 |
| BstSCI | CCNGG | 1 cut(s) | 157 |
| BsuI | GTATCC | 1 cut(s) | 155 |
| BsuRI | GGCC | 1 cut(s) | 83 |
| BtsCI | GGATG | 1 cut(s) | 235 |
| CfoI | GCGC | 2 cut(s) | 31, 190 |
| Cfr13I | GGNCC | 1 cut(s) | 155 |
| Csp6I | GTAC | 1 cut(s) | 172 |
| CviJI | RGCY | 6 cut(s) | 61, 83, 89, 108, 250, 257 |
| CviKI_1 | RGCY | 6 cut(s) | 61, 83, 89, 108, 250, 257 |
| CviQI | GTAC | 1 cut(s) | 172 |
| DdeI | CTNAG | 1 cut(s) | 72 |
| DpnI | GATC | 2 cut(s) | 23, 219 |
| DpnII | GATC | 2 cut(s) | 21, 217 |
| Eam1104I | CTCTTC | 1 cut(s) | 145 |
| EarI | CTCTTC | 1 cut(s) | 145 |
| Eco31I | GGTCTC | 1 cut(s) | 75 |
| Eco47I | GGWCC | 1 cut(s) | 155 |
| Eco88I | CYCGRG | 1 cut(s) | 6 |
| EcoRII | CCWGG | 1 cut(s) | 157 |
| Esp3I | CGTCTC | 1 cut(s) | 28 |
| FaiI | YATR | 1 cut(s) | 225 |
| FbaI | TGATCA | 1 cut(s) | 217 |
| FokI | GGATG | 1 cut(s) | 222 |
| GlaI | GCGC | 2 cut(s) | 30, 189 |
| GsuI | CTGGAG | 1 cut(s) | 237 |
| HaeIII | GGCC | 1 cut(s) | 83 |
| HhaI | GCGC | 2 cut(s) | 31, 190 |
| Hin6I | GCGC | 2 cut(s) | 29, 188 |
| HinP1I | GCGC | 2 cut(s) | 29, 188 |
| HinfI | GANTC | 2 cut(s) | 4, 52 |
| Hpy188I | TCNGA | 1 cut(s) | 57 |
| HpyCH4V | TGCA | 2 cut(s) | 120, 197 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 194 |
| HpyF3I | CTNAG | 1 cut(s) | 72 |
| HspAI | GCGC | 2 cut(s) | 29, 188 |
| Ksp22I | TGATCA | 1 cut(s) | 217 |
| Kzo9I | GATC | 2 cut(s) | 21, 217 |
| LpnPI | CCDG | 4 cut(s) | 97, 144, 171, 253 |
| MalI | GATC | 2 cut(s) | 23, 219 |
| MboI | GATC | 2 cut(s) | 21, 217 |
| MboII | GAAGA | 2 cut(s) | 31, 162 |
| MluCI | AATT | 1 cut(s) | 129 |
| MmeI | TCCRAC | 1 cut(s) | 127 |
| MnlI | CCTC | 5 cut(s) | 42, 73, 146, 152, 261 |
| MseI | TTAA | 1 cut(s) | 128 |
| MspA1I | CMGCKG | 2 cut(s) | 108, 257 |
| MspR9I | CCNGG | 1 cut(s) | 159 |
| MvaI | CCWGG | 1 cut(s) | 159 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 194 |
| NdeII | GATC | 2 cut(s) | 21, 217 |
| PfeI | GAWTC | 1 cut(s) | 52 |
| PfoI | TCCNGGA | 1 cut(s) | 157 |
| Psp6I | CCWGG | 1 cut(s) | 157 |
| PspGI | CCWGG | 1 cut(s) | 157 |
| PspPI | GGNCC | 1 cut(s) | 155 |
| PvuII | CAGCTG | 2 cut(s) | 108, 257 |
| RsaI | GTAC | 1 cut(s) | 173 |
| RsaNI | GTAC | 1 cut(s) | 172 |
| SaqAI | TTAA | 1 cut(s) | 128 |
| Sau3AI | GATC | 2 cut(s) | 21, 217 |
| Sau96I | GGNCC | 1 cut(s) | 155 |
| ScrFI | CCNGG | 1 cut(s) | 159 |
| SetI | ASST | 4 cut(s) | 110, 144, 157, 259 |
| SinI | GGWCC | 1 cut(s) | 155 |
| SmlI | CTYRAG | 1 cut(s) | 175 |
| SmoI | CTYRAG | 1 cut(s) | 175 |
| Sse9I | AATT | 1 cut(s) | 129 |
| SsiI | CCGC | 1 cut(s) | 44 |
| StyD4I | CCNGG | 1 cut(s) | 157 |
| TaqI | TCGA | 1 cut(s) | 24 |
| TasI | AATT | 1 cut(s) | 129 |
| TatI | WGTACW | 1 cut(s) | 171 |
| TfiI | GAWTC | 1 cut(s) | 52 |
| Tru1I | TTAA | 1 cut(s) | 128 |
| Tru9I | TTAA | 1 cut(s) | 128 |
| VpaK11BI | GGWCC | 1 cut(s) | 155 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 143 |