Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0003957

Physical Location & Seq

Genomic Coordinates Reverse (-)

15457880 .. 15465500

Gene Structure 7621 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0098200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1725 bp

ATGGCGGACAGAGACAACCGCGAGTGGGATTTCTATCTGAGAACCTTATCAAACAGCGCCAGAGACTCCAATGCCGCCAACAATCCCGCTTCTGATCCCGCTCTTCTCCAATCCGTGAAGAAGCTATATGAATTGTGTAAAGCTGAGAATTCAGAGGATTTGGCGGCTAGGGTTTATCCGCATATTAACAAGCTCTTTCAACGCTCCGTCGCTTCGCTCTCTGAATCTCGAACCACCTCTTATGGCCTCCTCTTGCTGGCCATTCTTCAATTTTGCCTTGATTTTGGAGACTTGGTTCTGCATGATGCTGATCCCAGTCTCAGGACATTTTTCCGTTCATGCTTGAGCCGTGAGTTTGCAGATCCAGTTGTTGCAGAAGCAACCCTTGACTTTCTGAATGTAAACAAGAAAAAGCTCTTAACTTCTTTCCCTACCTTACTGCCTCAGTTCTTTCCCTTAATGCTAAAGTTGATTGCATGGAATGGGGAACGATTAGAAAAATTATTTTTGAAGGTGTTTCCAGGATTGATGTCCCCAGGGTCATTTCTTCCGTTATTTCCATCTTTAGTGGACTTGCCAATTTTGGTAGTGGCATTGGAGAAAGTAGAAAGGAGCTCAGGATCATTAGTTGGAAACAGCATAGCTTCAATGCAAAAGAGTTCAGCTCCTGAGATGCTGCTGGCGCTTATGGATGAAGCTTATACTGGTTCAACAATAGGAGATGGAGGGGGAGACTCTGAGTCAGAGGACACCAATGCAATAGATGTTGCTGACCCTCTGTTCCTCGACCTTTTAAAAGATGAAAATGATGGCATCGCTGAACGCCACTTGACCTCTCCTGGGATAGTCGCAGCCTTACAGGCTGCAATAAATACCCCTCGATCTGATAGACTGAAATATATACTTCAGATGGCACCACGGCTTCTTGATTTGTACTTTTCTATAGCATTGCGTGATGTCAATAACTCTTTGATCTGCGCATTGATTCCCCTACTCATGTCTAGGACTGGTACAATATTTCCTGACAAAGTTTATTCTTATGAGGTCCGTAAGAGGCTTTTAGAATTCATGCTTGCCGCCTTTCAGCGCTCCCCAGATTTTATTGCGCTTTTGAAGAAGCCTATAATGGACAGGCTTGCAGAAGCTTATAGTGGACAAGCTTATGACAGCCCTGAAAAGGAAGAGTTGGCATTACAATTGTGTTGGGCTATTGGAGAGCATGGTGGGGGTGGACCATCTCACAAAGATGCAGCTCGTGAGCTCTTTGAGAGTTTAGAGCTACTCCTGTATGAAAGCATTTCATCTAGTCGTGTAGGCCTACGGCAAGAGTCTGCCTTGAGCTCAGATAACCAAACTTCAAGAAAGTCATCACAGTCAAGGCTTCTATGTTTTGTTATTACAGCCATTGCAAAGCTGGCAACCAACCATCGTGAATTGCTGCCCAGGGCACGCTTTTCCTTGAGCAAGGTAGTTAGGTCTCGGATATCGGATGTGAGGGTCTGGAGACGGGCTTGTGATTATTTGGGTTTAATAAATGAACCCGCAATTTCCTCGTCTGTTTTGGGGCCTTCACGACCTTCACATGGACAAATGCAGAAGCCAGGTACTGTAAAGTGGAGCGAGGGTGCAACAAAGATGATTGCACATGTTCCATTCTATATTCTTGGTGAACAAGAAGGTCCACCCTTCCATGAATTTTTCTTTGCAGATATTCTTCCAAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

574

Amino Acids

63.77

Weight (kDa)

5.96

Isoelectric Point (pI)

48.6

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SPG48	PF14764	31 - 156	1.9e-34	AP-5 complex subunit, vesicle trafficking
TPR_AP5Z1_C	PF25154	293 - 526	1.1e-25	AP-5 complex subunit zeta-1, C-terminal TPR repeats

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003957)

Species	Orthologous Gene IDs
malus_domestica	MD10G1272900.v1.1 MD12G1047700.v1.1
prunus_persica	Prupe.6G173100_v2.0.a1
rosa_chinensis	RchiOBHm_Chr4g0416901
rosa_laevigata	RLG00000010244 RLG00000014520 RLG00000034064
rosa_multiflora	Rmu_sc0000841.1_g000007 Rmu_sc0002944.1_g000034 Rmu_sc0005261.1_g000002 Rmu_sc0006888.1_g000053 Rmu_sc0009806.1_g000018 Rmu_sc0010720.1_g000010 Rmu_sc0011203.1_g000008 Rmu_sc0013694.1_g000001
rosa_roxburghii	Rroxscaffold_5G00339470
rosa_rugosa	Rorug04G0098200
rosa_samantha	Rh1AG100000 Rh1AG281200 Rh2BG194100 Rh2BG303100 Rh2CG528100 Rh3BG230300 Rh4CG169100 Rh5BG217900 Rh5BG457200 Rh5BG457300 Rh5CG335600 Rh5CG336000 Rh5CG479300 Rh6CG220900 Rh7CG245800 Rh7CG344000
rosa_wichuraiana	Rw1G019930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	979
AccB1I	GGYRCC	1 cut(s)	913
AccBSI	CCGCTC	1 cut(s)	101
AccII	CGCG	1 cut(s)	21
AciI	CCGC	9 cut(s)	5, 19, 75, 87, 99, 164, 179, 1077, 1542
AclWI	GGATC	4 cut(s)	89, 305, 356, 628
AcoI	YGGCCR	1 cut(s)	258
AcsI	RAATTY	3 cut(s)	148, 1064, 1694
AcuI	CTGAAG	1 cut(s)	890
AfaI	GTAC	3 cut(s)	935, 1012, 1606
AfeI	AGCGCT	1 cut(s)	1088
AfiI	CCNNNNNNNGG	6 cut(s)	25, 256, 321, 840, 1177, 1583
AflIII	ACRYGT	1 cut(s)	1645
AgsI	TTSAA	7 cut(s)	200, 269, 511, 648, 711, 1114, 1359
AhdI	GACNNNNNGTC	1 cut(s)	739
AjnI	CCWGG	5 cut(s)	520, 535, 838, 1442, 1600
AloI	GAACNNNNNNTCC	2 cut(s)	279, 311
Alw21I	GWGCWC	3 cut(s)	617, 1263, 1343
Alw26I	GTCTC	7 cut(s)	6, 57, 282, 323, 726, 1482, 1498
AlwI	GGATC	4 cut(s)	89, 305, 356, 628
AlwNI	CAGNNNCTG	2 cut(s)	668, 1607
Aor51HI	AGCGCT	1 cut(s)	1088
AoxI	GGCC	4 cut(s)	244, 258, 1315, 1565
ApeKI	GCWGC	5 cut(s)	676, 851, 863, 1250, 1438
ApoI	RAATTY	3 cut(s)	148, 1064, 1694
AspLEI	GCGC	5 cut(s)	59, 685, 980, 1089, 1108
AspS9I	GGNCC	4 cut(s)	1045, 1232, 1565, 1679
AsuHPI	GGTGA	1 cut(s)	1679
AvaII	GGWCC	3 cut(s)	1045, 1232, 1679
BaeGI	GKGCMC	1 cut(s)	1450
BalI	TGGCCA	1 cut(s)	260
BanI	GGYRCC	1 cut(s)	913
BanII	GRGCYC	3 cut(s)	617, 1263, 1343
BauI	CACGAG	1 cut(s)	1254
Bbv12I	GWGCWC	3 cut(s)	617, 1263, 1343
BbvI	GCAGC	5 cut(s)	663, 850, 863, 1262, 1425
BccI	CCATC	6 cut(s)	568, 716, 803, 904, 1243, 1434
BceAI	ACGGC	3 cut(s)	333, 935, 1337
BcgI	CGANNNNNNTGC	2 cut(s)	1533, 1567
BciT130I	CCWGG	5 cut(s)	522, 537, 840, 1444, 1602
BcoDI	GTCTC	7 cut(s)	6, 57, 282, 323, 726, 1482, 1498
BfaI	CTAG	3 cut(s)	168, 1002, 1305
BfmI	CTRYAG	1 cut(s)	942
BfoI	RGCGCY	3 cut(s)	60, 686, 1090
BglI	GCCNNNNNGGC	1 cut(s)	860
BisI	GCNGC	8 cut(s)	75, 165, 677, 852, 864, 1077, 1251, 1439
BlsI	GCNGC	8 cut(s)	76, 166, 678, 853, 865, 1078, 1252, 1440
Bme1390I	CCNGG	5 cut(s)	522, 537, 840, 1444, 1602
Bme18I	GGWCC	3 cut(s)	1045, 1232, 1679
BmeRI	GACNNNNNGTC	1 cut(s)	739
BmgT120I	GGNCC	4 cut(s)	1045, 1232, 1565, 1679
BmiI	GGNNCC	2 cut(s)	915, 1566
BmrFI	CCNGG	5 cut(s)	522, 537, 840, 1444, 1602
BmrI	ACTGGG	1 cut(s)	309
BmsI	GCATC	4 cut(s)	295, 663, 822, 1237
BmuI	ACTGGG	1 cut(s)	309
BplI	GAGNNNNNCTC	2 cut(s)	649, 681
BpmI	CTGGAG	1 cut(s)	1522
Bpu10I	CCTNAGC	1 cut(s)	616
BpuEI	CTTGAG	3 cut(s)	364, 1357, 1480
BsaBI	GATNNNNATC	2 cut(s)	33, 309
BsaI	GGTCTC	1 cut(s)	1482
BsaJI	CCNNGG	6 cut(s)	535, 536, 839, 917, 1442, 1443
BsaXI	ACNNNNNCTCC	4 cut(s)	279, 309, 1609, 1639
Bsc4I	CCNNNNNNNGG	6 cut(s)	25, 256, 321, 840, 1177, 1583
Bse1I	ACTGG	4 cut(s)	315, 365, 709, 1012
Bse3DI	GCAATG	2 cut(s)	947, 1404
Bse8I	GATNNNNATC	2 cut(s)	33, 309
BseBI	CCWGG	5 cut(s)	522, 537, 840, 1444, 1602
BseDI	CCNNGG	6 cut(s)	535, 536, 839, 917, 1442, 1443
BseGI	GGATG	2 cut(s)	697, 1495
BseJI	GATNNNNATC	2 cut(s)	33, 309
BseLI	CCNNNNNNNGG	6 cut(s)	25, 256, 321, 840, 1177, 1583
BseMI	GCAATG	2 cut(s)	947, 1404
BseMII	CTCAG	8 cut(s)	29, 135, 334, 458, 630, 660, 729, 1356
BseNI	ACTGG	4 cut(s)	315, 365, 709, 1012
BseRI	GAGGAG	1 cut(s)	239
BseSI	GKGCMC	1 cut(s)	1450
BseXI	GCAGC	5 cut(s)	663, 850, 863, 1262, 1425
Bsh1236I	CGCG	1 cut(s)	21
BshFI	GGCC	4 cut(s)	246, 260, 1317, 1567
BshNI	GGYRCC	1 cut(s)	913
BsiHKAI	GWGCWC	3 cut(s)	617, 1263, 1343
BslFI	GGGAC	1 cut(s)	517
BslI	CCNNNNNNNGG	6 cut(s)	25, 256, 321, 840, 1177, 1583
BsmAI	GTCTC	7 cut(s)	6, 57, 282, 323, 726, 1482, 1498
BsmBI	CGTCTC	1 cut(s)	1498
BsmFI	GGGAC	1 cut(s)	517
BsnI	GGCC	4 cut(s)	246, 260, 1317, 1567
Bso31I	GGTCTC	1 cut(s)	1482
Bsp1286I	GDGCHC	4 cut(s)	617, 1263, 1343, 1450
Bsp143I	GATC	6 cut(s)	94, 310, 361, 620, 881, 972
BspACI	CCGC	9 cut(s)	5, 19, 75, 87, 99, 164, 179, 1077, 1542
BspANI	GGCC	4 cut(s)	246, 260, 1317, 1567
BspCNI	CTCAG	8 cut(s)	30, 136, 333, 457, 629, 661, 730, 1355
BspFNI	CGCG	1 cut(s)	21
BspLI	GGNNCC	2 cut(s)	915, 1566
BspPI	GGATC	4 cut(s)	89, 305, 356, 628
BspQI	GCTCTTC	1 cut(s)	108
BspT107I	GGYRCC	1 cut(s)	913
BspTNI	GGTCTC	1 cut(s)	1482
BsrBI	CCGCTC	1 cut(s)	101
BsrDI	GCAATG	2 cut(s)	947, 1404
BsrI	ACTGG	4 cut(s)	315, 365, 709, 1012
BssECI	CCNNGG	6 cut(s)	535, 536, 839, 917, 1442, 1443
BssMI	GATC	6 cut(s)	94, 310, 361, 620, 881, 972
BssSI	CACGAG	1 cut(s)	1254
Bst2BI	CACGAG	1 cut(s)	1254
Bst2UI	CCWGG	5 cut(s)	522, 537, 840, 1444, 1602
Bst4CI	ACNGT	2 cut(s)	1374, 1609
Bst6I	CTCTTC	2 cut(s)	108, 1176
BstC8I	GCNNGC	6 cut(s)	258, 681, 1074, 1137, 1416, 1450
BstDEI	CTNAG	8 cut(s)	38, 144, 320, 444, 616, 669, 738, 1342
BstDSI	CCRYGG	1 cut(s)	917
BstF5I	GGATG	2 cut(s)	697, 1495
BstFNI	CGCG	1 cut(s)	21
BstH2I	RGCGCY	3 cut(s)	60, 686, 1090
BstHHI	GCGC	5 cut(s)	59, 685, 980, 1089, 1108
BstKTI	GATC	6 cut(s)	97, 313, 364, 623, 884, 975
BstMAI	GTCTC	7 cut(s)	6, 57, 282, 323, 726, 1482, 1498
BstMBI	GATC	6 cut(s)	94, 310, 361, 620, 881, 972
BstMWI	GCNNNNNNNGC	3 cut(s)	682, 860, 1415
BstNI	CCWGG	5 cut(s)	522, 537, 840, 1444, 1602
BstNSI	RCATGY	1 cut(s)	1649
BstSCI	CCNGG	5 cut(s)	520, 535, 838, 1442, 1600
BstSFI	CTRYAG	1 cut(s)	942
BstSLI	GKGCMC	1 cut(s)	1450
BstUI	CGCG	1 cut(s)	21
BstV1I	GCAGC	5 cut(s)	663, 850, 863, 1262, 1425
BstX2I	RGATCY	1 cut(s)	361
BstYI	RGATCY	1 cut(s)	361
BsuRI	GGCC	4 cut(s)	246, 260, 1317, 1567
BtgI	CCRYGG	1 cut(s)	917
BtgZI	GCGATG	1 cut(s)	799
BtsCI	GGATG	2 cut(s)	697, 1495
Cac8I	GCNNGC	6 cut(s)	258, 681, 1074, 1137, 1416, 1450
CaiI	CAGNNNCTG	2 cut(s)	668, 1607
CfoI	GCGC	5 cut(s)	59, 685, 980, 1089, 1108
Cfr13I	GGNCC	4 cut(s)	1045, 1232, 1565, 1679
Csp6I	GTAC	3 cut(s)	934, 1011, 1605
CviAII	CATG	9 cut(s)	302, 339, 477, 997, 1069, 1220, 1583, 1646, 1691
CviQI	GTAC	3 cut(s)	934, 1011, 1605
DdeI	CTNAG	8 cut(s)	38, 144, 320, 444, 616, 669, 738, 1342
DpnI	GATC	6 cut(s)	96, 312, 363, 622, 883, 974
DpnII	GATC	6 cut(s)	94, 310, 361, 620, 881, 972
DraI	TTTAAA	1 cut(s)	795
DriI	GACNNNNNGTC	1 cut(s)	739
EaeI	YGGCCR	1 cut(s)	258
Eam1104I	CTCTTC	2 cut(s)	108, 1176
Eam1105I	GACNNNNNGTC	1 cut(s)	739
EarI	CTCTTC	2 cut(s)	108, 1176
EciI	GGCGGA	1 cut(s)	20
Ecl136II	GAGCTC	3 cut(s)	615, 1261, 1341
Eco147I	AGGCCT	1 cut(s)	1317
Eco24I	GRGCYC	3 cut(s)	617, 1263, 1343
Eco31I	GGTCTC	1 cut(s)	1482
Eco32I	GATATC	1 cut(s)	1485
Eco47I	GGWCC	3 cut(s)	1045, 1232, 1679
Eco47III	AGCGCT	1 cut(s)	1088
Eco53kI	GAGCTC	3 cut(s)	615, 1261, 1341
Eco57I	CTGAAG	1 cut(s)	890
EcoICRI	GAGCTC	3 cut(s)	615, 1261, 1341
EcoO109I	RGGNCCY	1 cut(s)	1565
EcoRI	GAATTC	2 cut(s)	148, 1064
EcoRII	CCWGG	5 cut(s)	520, 535, 838, 1442, 1600
EcoRV	GATATC	1 cut(s)	1485
EcoT38I	GRGCYC	3 cut(s)	617, 1263, 1343
Esp3I	CGTCTC	1 cut(s)	1498
FaeI	CATG	9 cut(s)	305, 342, 480, 1000, 1072, 1223, 1586, 1649, 1694
FalI	AAGNNNNNCTT	2 cut(s)	369, 401
FaqI	GGGAC	1 cut(s)	517
FatI	CATG	9 cut(s)	301, 338, 476, 996, 1068, 1219, 1582, 1645, 1690
FauI	CCCGC	3 cut(s)	94, 106, 1549
Fnu4HI	GCNGC	8 cut(s)	75, 165, 677, 852, 864, 1077, 1251, 1439
FokI	GGATG	2 cut(s)	704, 1502
FriOI	GRGCYC	3 cut(s)	617, 1263, 1343
Fsp4HI	GCNGC	8 cut(s)	75, 165, 677, 852, 864, 1077, 1251, 1439
FspBI	CTAG	3 cut(s)	168, 1002, 1305
FspI	TGCGCA	1 cut(s)	979
GlaI	GCGC	5 cut(s)	58, 684, 979, 1088, 1107
GluI	GCNGC	8 cut(s)	75, 165, 677, 852, 864, 1077, 1251, 1439
GsuI	CTGGAG	1 cut(s)	1522
HaeII	RGCGCY	3 cut(s)	60, 686, 1090
HaeIII	GGCC	4 cut(s)	246, 260, 1317, 1567
HhaI	GCGC	5 cut(s)	59, 685, 980, 1089, 1108
Hin1II	CATG	9 cut(s)	305, 342, 480, 1000, 1072, 1223, 1586, 1649, 1694
Hin6I	GCGC	5 cut(s)	57, 683, 978, 1087, 1106
HinP1I	GCGC	5 cut(s)	57, 683, 978, 1087, 1106
HindIII	AAGCTT	3 cut(s)	696, 1143, 1158
HinfI	GANTC	6 cut(s)	65, 224, 734, 740, 985, 1328
HphI	GGTGA	1 cut(s)	1679
Hpy166II	GTNNAC	6 cut(s)	403, 571, 1154, 1232, 1670, 1682
Hpy8I	GTNNAC	6 cut(s)	403, 571, 1154, 1232, 1670, 1682
Hpy99I	CGWCG	1 cut(s)	212
HpyAV	CCTTC	5 cut(s)	505, 1578, 1587, 1670, 1696
HpyCH4III	ACNGT	2 cut(s)	1374, 1609
HpyF10VI	GCNNNNNNNGC	3 cut(s)	682, 860, 1415
HpyF3I	CTNAG	8 cut(s)	38, 144, 320, 444, 616, 669, 738, 1342
Hsp92II	CATG	9 cut(s)	305, 342, 480, 1000, 1072, 1223, 1586, 1649, 1694
HspAI	GCGC	5 cut(s)	57, 683, 978, 1087, 1106
Kzo9I	GATC	6 cut(s)	94, 310, 361, 620, 881, 972
LguI	GCTCTTC	1 cut(s)	108
LmnI	GCTCC	5 cut(s)	209, 612, 670, 1094, 1617
Lsp1109I	GCAGC	5 cut(s)	663, 850, 863, 1262, 1425
LweI	GCATC	4 cut(s)	295, 663, 822, 1237
MaeI	CTAG	3 cut(s)	168, 1002, 1305
MalI	GATC	6 cut(s)	96, 312, 363, 622, 883, 974
MbiI	CCGCTC	1 cut(s)	101
MboI	GATC	6 cut(s)	94, 310, 361, 620, 881, 972
MboII	GAAGA	7 cut(s)	95, 130, 257, 539, 1126, 1193, 1706
MfeI	CAATTG	1 cut(s)	1196
MflI	RGATCY	1 cut(s)	361
MhlI	GDGCHC	4 cut(s)	617, 1263, 1343, 1450
MlsI	TGGCCA	1 cut(s)	260
MluNI	TGGCCA	1 cut(s)	260
MlyI	GAGTC	4 cut(s)	59, 728, 749, 1337
MmeI	TCCRAC	1 cut(s)	610
Mox20I	TGGCCA	1 cut(s)	260
MscI	TGGCCA	1 cut(s)	260
MseI	TTAA	5 cut(s)	186, 419, 458, 794, 1529
MslI	CAYNNNNRTG	1 cut(s)	1245
Msp20I	TGGCCA	1 cut(s)	260
MspR9I	CCNGG	5 cut(s)	522, 537, 840, 1444, 1602
MunI	CAATTG	1 cut(s)	1196
MvaI	CCWGG	5 cut(s)	522, 537, 840, 1444, 1602
MvnI	CGCG	1 cut(s)	21
MwoI	GCNNNNNNNGC	3 cut(s)	682, 860, 1415
NdeII	GATC	6 cut(s)	94, 310, 361, 620, 881, 972
NlaIII	CATG	9 cut(s)	305, 342, 480, 1000, 1072, 1223, 1586, 1649, 1694
NlaIV	GGNNCC	2 cut(s)	915, 1566
NsbI	TGCGCA	1 cut(s)	979
NspI	RCATGY	1 cut(s)	1649
PasI	CCCWGGG	2 cut(s)	536, 1443
PceI	AGGCCT	1 cut(s)	1317
PciI	ACATGT	1 cut(s)	1645
PciSI	GCTCTTC	1 cut(s)	108
PfeI	GAWTC	2 cut(s)	224, 985
PfoI	TCCNGGA	1 cut(s)	520
PkrI	GCNGC	8 cut(s)	76, 166, 678, 853, 865, 1078, 1252, 1440
PleI	GAGTC	4 cut(s)	59, 728, 748, 1336
PpsI	GAGTC	4 cut(s)	59, 728, 748, 1336
PscI	ACATGT	1 cut(s)	1645
Psp124BI	GAGCTC	3 cut(s)	617, 1263, 1343
Psp6I	CCWGG	5 cut(s)	520, 535, 838, 1442, 1600
PspGI	CCWGG	5 cut(s)	520, 535, 838, 1442, 1600
PspN4I	GGNNCC	2 cut(s)	915, 1566
PspPI	GGNCC	4 cut(s)	1045, 1232, 1565, 1679
PstNI	CAGNNNCTG	2 cut(s)	668, 1607
PsuI	RGATCY	1 cut(s)	361
RsaI	GTAC	3 cut(s)	935, 1012, 1606
RsaNI	GTAC	3 cut(s)	934, 1011, 1605
RseI	CAYNNNNRTG	1 cut(s)	1245
SacI	GAGCTC	3 cut(s)	617, 1263, 1343
SapI	GCTCTTC	1 cut(s)	108
SaqAI	TTAA	5 cut(s)	186, 419, 458, 794, 1529
SatI	GCNGC	8 cut(s)	75, 165, 677, 852, 864, 1077, 1251, 1439
Sau3AI	GATC	6 cut(s)	94, 310, 361, 620, 881, 972
Sau96I	GGNCC	4 cut(s)	1045, 1232, 1565, 1679
SchI	GAGTC	4 cut(s)	59, 728, 749, 1337
ScrFI	CCNGG	5 cut(s)	522, 537, 840, 1444, 1602
SduI	GDGCHC	4 cut(s)	617, 1263, 1343, 1450
SfaNI	GCATC	4 cut(s)	295, 663, 822, 1237
SfcI	CTRYAG	1 cut(s)	942
SinI	GGWCC	3 cut(s)	1045, 1232, 1679
SmiMI	CAYNNNNRTG	1 cut(s)	1245
SmlI	CTYRAG	3 cut(s)	343, 1336, 1459
SmoI	CTYRAG	3 cut(s)	343, 1336, 1459
SseBI	AGGCCT	1 cut(s)	1317
SsiI	CCGC	9 cut(s)	5, 19, 75, 87, 99, 164, 179, 1077, 1542
SspI	AATATT	1 cut(s)	1017
SspMI	CTAG	3 cut(s)	168, 1002, 1305
SstI	GAGCTC	3 cut(s)	617, 1263, 1343
StuI	AGGCCT	1 cut(s)	1317
StyD4I	CCNGG	5 cut(s)	520, 535, 838, 1442, 1600
TaaI	ACNGT	2 cut(s)	1374, 1609
TaqI	TCGA	3 cut(s)	229, 786, 880
TatI	WGTACW	1 cut(s)	933
TauI	GCSGC	3 cut(s)	77, 167, 1079
TfiI	GAWTC	2 cut(s)	224, 985
Tru1I	TTAA	5 cut(s)	186, 419, 458, 794, 1529
Tru9I	TTAA	5 cut(s)	186, 419, 458, 794, 1529
TseI	GCWGC	5 cut(s)	676, 851, 863, 1250, 1438
TspDTI	ATGAA	9 cut(s)	144, 327, 708, 816, 1057, 1290, 1305, 1551, 1707
TspGWI	ACGGA	5 cut(s)	103, 196, 323, 540, 1037
VpaK11BI	GGWCC	3 cut(s)	1045, 1232, 1679
XapI	RAATTY	3 cut(s)	148, 1064, 1694
XceI	RCATGY	1 cut(s)	1649
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1411
XspI	CTAG	3 cut(s)	168, 1002, 1305

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.