No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD10G1272900.v1.1 MD12G1047700.v1.1 |
| prunus_persica | Prupe.6G173100_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr4g0416901 |
| rosa_laevigata | RLG00000010244 RLG00000014520 RLG00000034064 |
| rosa_multiflora | Rmu_sc0000841.1_g000007 Rmu_sc0002944.1_g000034 Rmu_sc0005261.1_g000002 Rmu_sc0006888.1_g000053 Rmu_sc0009806.1_g000018 Rmu_sc0010720.1_g000010 Rmu_sc0011203.1_g000008 Rmu_sc0013694.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00339470 |
| rosa_rugosa | Rorug04G0098200 |
| rosa_samantha | Rh1AG100000 Rh1AG281200 Rh2BG194100 Rh2BG303100 Rh2CG528100 Rh3BG230300 Rh4CG169100 Rh5BG217900 Rh5BG457200 Rh5BG457300 Rh5CG335600 Rh5CG336000 Rh5CG479300 Rh6CG220900 Rh7CG245800 Rh7CG344000 |
| rosa_wichuraiana | Rw1G019930 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 56, 122 |
| AcsI | RAATTY | 1 cut(s) | 75 |
| AfaI | GTAC | 2 cut(s) | 177, 222 |
| AflIII | ACRYGT | 2 cut(s) | 268, 323 |
| AgsI | TTSAA | 5 cut(s) | 37, 197, 242, 262, 317 |
| AjnI | CCWGG | 1 cut(s) | 210 |
| AluBI | AGCT | 2 cut(s) | 285, 340 |
| AluI | AGCT | 2 cut(s) | 285, 340 |
| AlwI | GGATC | 2 cut(s) | 56, 122 |
| ApoI | RAATTY | 1 cut(s) | 75 |
| BciT130I | CCWGG | 1 cut(s) | 212 |
| BmcAI | AGTACT | 2 cut(s) | 177, 222 |
| Bme1390I | CCNGG | 1 cut(s) | 212 |
| BmrFI | CCNGG | 1 cut(s) | 212 |
| BsaJI | CCNNGG | 1 cut(s) | 84 |
| BseBI | CCWGG | 1 cut(s) | 212 |
| BseDI | CCNNGG | 1 cut(s) | 84 |
| Bsp143I | GATC | 3 cut(s) | 61, 114, 151 |
| Bsp19I | CCATGG | 1 cut(s) | 84 |
| BspPI | GGATC | 2 cut(s) | 56, 122 |
| BssECI | CCNNGG | 1 cut(s) | 84 |
| BssMI | GATC | 3 cut(s) | 61, 114, 151 |
| BssT1I | CCWWGG | 1 cut(s) | 84 |
| Bst2UI | CCWGG | 1 cut(s) | 212 |
| BstDSI | CCRYGG | 1 cut(s) | 84 |
| BstKTI | GATC | 3 cut(s) | 64, 117, 154 |
| BstMBI | GATC | 3 cut(s) | 61, 114, 151 |
| BstNI | CCWGG | 1 cut(s) | 212 |
| BstNSI | RCATGY | 2 cut(s) | 272, 327 |
| BstSCI | CCNGG | 1 cut(s) | 210 |
| BtgI | CCRYGG | 1 cut(s) | 84 |
| Csp6I | GTAC | 2 cut(s) | 176, 221 |
| CviAII | CATG | 4 cut(s) | 13, 85, 269, 324 |
| CviJI | RGCY | 2 cut(s) | 285, 340 |
| CviKI_1 | RGCY | 2 cut(s) | 285, 340 |
| CviQI | GTAC | 2 cut(s) | 176, 221 |
| DpnI | GATC | 3 cut(s) | 63, 116, 153 |
| DpnII | GATC | 3 cut(s) | 61, 114, 151 |
| DraI | TTTAAA | 2 cut(s) | 205, 250 |
| Eco130I | CCWWGG | 1 cut(s) | 84 |
| EcoRII | CCWGG | 1 cut(s) | 210 |
| EcoT14I | CCWWGG | 1 cut(s) | 84 |
| ErhI | CCWWGG | 1 cut(s) | 84 |
| FaeI | CATG | 4 cut(s) | 16, 88, 272, 327 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 207, 239 |
| FatI | CATG | 4 cut(s) | 12, 84, 268, 323 |
| Hin1II | CATG | 4 cut(s) | 16, 88, 272, 327 |
| Hpy188I | TCNGA | 1 cut(s) | 124 |
| Hpy188III | TCNNGA | 3 cut(s) | 259, 314, 381 |
| HpyCH4V | TGCA | 4 cut(s) | 94, 173, 274, 329 |
| Hsp92II | CATG | 4 cut(s) | 16, 88, 272, 327 |
| Kzo9I | GATC | 3 cut(s) | 61, 114, 151 |
| LpnPI | CCDG | 4 cut(s) | 79, 95, 197, 224 |
| MalI | GATC | 3 cut(s) | 63, 116, 153 |
| MboI | GATC | 3 cut(s) | 61, 114, 151 |
| MboII | GAAGA | 2 cut(s) | 274, 329 |
| MluCI | AATT | 4 cut(s) | 75, 159, 306, 373 |
| MseI | TTAA | 7 cut(s) | 17, 204, 249, 281, 305, 336, 372 |
| MspR9I | CCNGG | 1 cut(s) | 212 |
| MvaI | CCWGG | 1 cut(s) | 212 |
| NcoI | CCATGG | 1 cut(s) | 84 |
| NdeII | GATC | 3 cut(s) | 61, 114, 151 |
| NlaIII | CATG | 4 cut(s) | 16, 88, 272, 327 |
| NspI | RCATGY | 2 cut(s) | 272, 327 |
| PciI | ACATGT | 2 cut(s) | 268, 323 |
| PfoI | TCCNGGA | 1 cut(s) | 210 |
| PscI | ACATGT | 2 cut(s) | 268, 323 |
| Psp6I | CCWGG | 1 cut(s) | 210 |
| PspGI | CCWGG | 1 cut(s) | 210 |
| RsaI | GTAC | 2 cut(s) | 177, 222 |
| RsaNI | GTAC | 2 cut(s) | 176, 221 |
| SaqAI | TTAA | 7 cut(s) | 17, 204, 249, 281, 305, 336, 372 |
| Sau3AI | GATC | 3 cut(s) | 61, 114, 151 |
| ScaI | AGTACT | 2 cut(s) | 177, 222 |
| ScrFI | CCNGG | 1 cut(s) | 212 |
| SetI | ASST | 4 cut(s) | 203, 248, 287, 342 |
| Sse9I | AATT | 4 cut(s) | 75, 159, 306, 373 |
| SspI | AATATT | 1 cut(s) | 21 |
| StyD4I | CCNGG | 1 cut(s) | 210 |
| StyI | CCWWGG | 1 cut(s) | 84 |
| TasI | AATT | 4 cut(s) | 75, 159, 306, 373 |
| TatI | WGTACW | 2 cut(s) | 175, 220 |
| Tru1I | TTAA | 7 cut(s) | 17, 204, 249, 281, 305, 336, 372 |
| Tru9I | TTAA | 7 cut(s) | 17, 204, 249, 281, 305, 336, 372 |
| TspDTI | ATGAA | 1 cut(s) | 20 |
| XapI | RAATTY | 1 cut(s) | 75 |
| XceI | RCATGY | 2 cut(s) | 272, 327 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 19 |
| ZrmI | AGTACT | 2 cut(s) | 177, 222 |