Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0002602

Physical Location & Seq

Genomic Coordinates Forward (+)

56249913 .. 56255737

Gene Structure 5825 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0395900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1857 bp

ATGCATATGCATCTGCTATCTTTTTGTTTCTTAAGGACAAAGTTCATGACCTTGCTGGTGATGATTATCGGATTTCTGTTTTGGAGTCTATTAAGAGGTGGATACAGGTGTATTGTGCAGGCTGTGCCTCTTCAGTTCTTGCATGCTCTACTTGCTTATCTTGGTGATTCTGTTAGTTATGAAAGTGCATCATCCGGTCTCAAGTCACCTTTGGCTAAATGCCCTGCTTCATTCTATCCTGGAATCGATACTCCATCTGAAGGTCTTGTAAGATGGCAGTTGCGACTAGAGTATTTTGCTTATGAAACATTGCAAGATTTGAGAATAGCAAAATTATTTGAGATTATTGTGGATTATCCTGACAGCTCTCCTGCGATTGAAGATTTGAAACAGTGTCTTGAATACACTGGACAACATTCTAAGCTTGTGGAGTCATTTATTTCAGCACTACAGTACCGGTTGCTCACTGCAGGTGCCTCAACAAATGACATTTTGCATCAATATGTTTCAACGATCAAGGCACTCCGGACAATAGATCCAGCAGGTGTTTTCCTTGAAGCAGTCGGTGAGCCAATAAGGGACTATTTAAGGGGAAGGAAAGACACCATAAAGTGCATTGTGACCATGCTTACCGATGGGACTGGTGCAAATTCTAATGTATCCGGAAACACTGGCGATAGCCTTCTTGAAGAATTAAATAGAGATGAAGAAAGCCAAGAGAACATTGCTCCTGAGGATGACTTTCATACTGATGATAAGCAAGCTTGGATAAATGCTTCACGCTGGGAGCCTGACCCTGTAGAAGCTGACCCCCTGAAAGGTAGCAGGAACCGAAGGAAGGTTGACATACTTGGAATGATTGTTGGCATAATTGGTTCACAAGACCAACTTGTTAATGAATACCGTGTTATGCTGGCCGAAAAGCTTCTCAACAAATCTGATTATGACATTGATTCAGAGATACGTACTCTTGAACTCCTCAAGATACATTTTGGAGAGAACAGCATGCAGAAATGTGAAATTATGCTCAATGATCTGATTGGTTCTAAGAGGACCAACACTAATATTAAAGCAACCATAGCTCAGCCATCTCATACAGGCGGTGAGCTGGGGGATAACAGGGTATCCATGGATATTCTTGATGCTACAATTATCTCTTCAAATTTTTGGCCTCCAATCCAGGAGGAGTCCCTAAATGTACCTGGGCCTGTTGACCAACTACTCTCTGATTATGCAAAGAGATTTAATGAAATCAAGACCCCTCGTAAGCTATTGTGGAAGAAGAATCTTGGTACTGTCAAGTTGGAATTGCAATTTGAAGATAGAGAAATGCAGTTCATGGTTGCTCCTCTTCATGCAGCAATCATAATGCAATTTCAAGATCAGAAAAGCTGGACCTCCAAAGATCTTGCAGCTGCAGTTGGGGTTCCAATAGATATACTTAATCGGAGGATCAATTTTTGGATAAGCAAGGGAATTCTTACAGAATCACTTGGGGAAGACACTGATGACCATGTGTTTACACTAATGGAAGGGATGATTGACACTGGCAAAAACACTGCTAATGATGGGAACTGCGAGGATCTTATAGTTGGTGATGAGGAAGGAGAGAGCTCTGTAGCCTCTGTAGAGGATCAACTGCGCAAGGAAATGACTGTGTATGAGAAATTTATTTTGGGGATGCTCACAAACTTTGGAAGCATGGCTTTGGATCGTATTCATAATACTCTCAAGATGTTCTGCATAGCTGATCCTACTTATGACAAAACCCTCCAACAGCTGCAAAGTTTCTTATCAGGTCTAGTTTCTGAAGAGAAATTAGAACTAAGAGATGGCATGTACTTTTTGAAGAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Branch

Protein Analysis

618

Amino Acids

69.68

Weight (kDa)

4.91

Isoelectric Point (pI)

38.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_ANAPC2	PF25773	91 - 199	5.6e-42	ANAPC2-like, TPR repeats
Cullin_AB	PF26557	384 - 508	3.3e-15	Cullin alpha+beta domain
ANAPC2	PF08672	557 - 614	1.3e-23	Anaphase promoting complex (APC) subunit 2

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002602)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G11940 AT1G11940 AT1G62305 AT1G62305 AT1G62305
fragaria_vesca	FvH4_3g01580 FvH4_3g01580 FvH4_3g01580 FvH4_6g42672 FvH4_6g42672
malus_domestica	MD05G1350900.v1.1 MD09G1071200.v1.1
prunus_persica	Prupe.3G213600_v2.0.a1 Prupe.4G016500_v2.0.a1 Prupe.4G016500_v2.0.a1
pyrus_communis	pycom05g31820
rosa_chinensis	RchiOBHm_Chr2g0158591 RchiOBHm_Chr5g0002391
rosa_laevigata	RLG00000021099 RLG00000031028
rosa_multiflora	Rmu_sc0004188.1_g000020 Rmu_sc0006137.1_g000001 Rmu_sc0017945.1_g000001 Rmu_ssc0000458.1_g000001
rosa_roxburghii	Rroxscaffold_1G00073460 Rroxscaffold_2G00091180
rosa_rugosa	Rorug02G0470900 Rorug02G0471000 Rorug04G0395900 Rorug04G0395900
rosa_samantha	Rh2AG536500 Rh2BG549600 Rh2CG520200 Rh2DG559300 Rh5AG018700 Rh5BG021500 Rh5CG020600 Rh5DG019700
rosa_wichuraiana	Rw2G044410 Rw5G001750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	461, 533
Acc16I	TGCGCA	1 cut(s)	1643
Acc36I	ACCTGC	2 cut(s)	461, 533
AccB1I	GGYRCC	1 cut(s)	473
AccIII	TCCGGA	2 cut(s)	525, 662
AciI	CCGC	1 cut(s)	1101
AclWI	GGATC	6 cut(s)	530, 1460, 1590, 1641, 1719, 1745
AcoI	YGGCCR	1 cut(s)	915
AcsI	RAATTY	4 cut(s)	649, 1162, 1476, 1667
AcuI	CTGAAG	3 cut(s)	116, 279, 1830
AfaI	GTAC	5 cut(s)	455, 967, 1200, 1294, 1841
AfiI	CCNNNNNNNGG	3 cut(s)	260, 818, 838
AflII	CTTAAG	1 cut(s)	31
AgeI	ACCGGT	1 cut(s)	456
AjnI	CCWGG	3 cut(s)	238, 1179, 1201
AjuI	GAANNNNNNNTTGG	2 cut(s)	1658, 1690
Alw21I	GWGCWC	1 cut(s)	1616
Alw26I	GTCTC	1 cut(s)	203
AlwI	GGATC	6 cut(s)	530, 1460, 1590, 1641, 1719, 1745
Aor13HI	TCCGGA	2 cut(s)	525, 662
AoxI	GGCC	3 cut(s)	915, 1169, 1205
ApeKI	GCWGC	4 cut(s)	1358, 1412, 1415, 1780
ApoI	RAATTY	4 cut(s)	649, 1162, 1476, 1667
AsiGI	ACCGGT	1 cut(s)	456
Asp700I	GAANNNNTTC	1 cut(s)	924
AspLEI	GCGC	1 cut(s)	1644
AspS9I	GGNCC	3 cut(s)	1053, 1205, 1395
AsuHPI	GGTGA	6 cut(s)	70, 176, 198, 578, 1115, 1607
AvaII	GGWCC	2 cut(s)	1053, 1395
AxyI	CCTNAGG	1 cut(s)	732
BaeI	ACNNNNGTAYC	4 cut(s)	94, 127, 437, 470
BanI	GGYRCC	1 cut(s)	473
BanII	GRGCYC	1 cut(s)	1616
BbsI	GAAGAC	1 cut(s)	1506
Bbv12I	GWGCWC	1 cut(s)	1616
BbvI	GCAGC	4 cut(s)	1370, 1402, 1424, 1767
BccI	CCATC	6 cut(s)	262, 267, 629, 1096, 1562, 1826
BciT130I	CCWGG	3 cut(s)	240, 1181, 1203
BciVI	GTATCC	3 cut(s)	95, 670, 1135
BcoDI	GTCTC	1 cut(s)	203
BfaI	CTAG	2 cut(s)	287, 1802
BfmI	CTRYAG	6 cut(s)	449, 468, 798, 1416, 1617, 1626
BfrI	CTTAAG	1 cut(s)	31
BfuAI	ACCTGC	2 cut(s)	461, 533
BfuI	GTATCC	3 cut(s)	95, 670, 1135
BglII	AGATCT	1 cut(s)	1405
BisI	GCNGC	4 cut(s)	1359, 1413, 1416, 1781
BlpI	GCTNAGC	1 cut(s)	1083
BlsI	GCNGC	4 cut(s)	1360, 1414, 1417, 1782
Bme1390I	CCNGG	3 cut(s)	240, 1181, 1203
Bme18I	GGWCC	2 cut(s)	1053, 1395
BmgT120I	GGNCC	3 cut(s)	1053, 1205, 1395
BmiI	GGNNCC	4 cut(s)	475, 789, 830, 1428
BmrFI	CCNGG	3 cut(s)	240, 1181, 1203
BmsI	GCATC	5 cut(s)	19, 197, 505, 1132, 1671
BpiI	GAAGAC	1 cut(s)	1506
Bpu1102I	GCTNAGC	1 cut(s)	1083
BpuEI	CTTGAG	3 cut(s)	185, 965, 1715
Bsa29I	ATCGAT	1 cut(s)	246
BsaAI	YACGTR	1 cut(s)	965
BsaBI	GATNNNNATC	1 cut(s)	65
BsaI	GGTCTC	1 cut(s)	203
BsaJI	CCNNGG	2 cut(s)	1128, 1202
BsaWI	WCCGGW	4 cut(s)	194, 456, 525, 662
Bsc4I	CCNNNNNNNGG	3 cut(s)	260, 818, 838
Bse118I	RCCGGY	1 cut(s)	456
Bse1I	ACTGG	4 cut(s)	412, 646, 676, 1552
Bse21I	CCTNAGG	1 cut(s)	732
Bse3DI	GCAATG	2 cut(s)	308, 723
Bse8I	GATNNNNATC	1 cut(s)	65
BseAI	TCCGGA	2 cut(s)	525, 662
BseBI	CCWGG	3 cut(s)	240, 1181, 1203
BseCI	ATCGAT	1 cut(s)	246
BseDI	CCNNGG	2 cut(s)	1128, 1202
BseGI	GGATG	4 cut(s)	191, 742, 1542, 1686
BseJI	GATNNNNATC	1 cut(s)	65
BseLI	CCNNNNNNNGG	3 cut(s)	260, 818, 838
BseMI	GCAATG	2 cut(s)	308, 723
BseMII	CTCAG	2 cut(s)	723, 1097
BseNI	ACTGG	4 cut(s)	412, 646, 676, 1552
BseRI	GAGGAG	3 cut(s)	968, 1199, 1338
BseXI	GCAGC	4 cut(s)	1370, 1402, 1424, 1767
BseYI	CCCAGC	2 cut(s)	783, 1108
BsgI	GTGCAG	1 cut(s)	137
BshFI	GGCC	3 cut(s)	917, 1171, 1207
BshNI	GGYRCC	1 cut(s)	473
BshTI	ACCGGT	1 cut(s)	456
BshVI	ATCGAT	1 cut(s)	246
BsiHKAI	GWGCWC	1 cut(s)	1616
BsiSI	CCGG	4 cut(s)	195, 457, 526, 663
BslFI	GGGAC	3 cut(s)	593, 652, 1174
BslI	CCNNNNNNNGG	3 cut(s)	260, 818, 838
BsmAI	GTCTC	1 cut(s)	203
BsmFI	GGGAC	3 cut(s)	593, 652, 1174
BsnI	GGCC	3 cut(s)	917, 1171, 1207
Bso31I	GGTCTC	1 cut(s)	203
Bsp1286I	GDGCHC	1 cut(s)	1616
Bsp13I	TCCGGA	2 cut(s)	525, 662
Bsp1720I	GCTNAGC	1 cut(s)	1083
Bsp19I	CCATGG	1 cut(s)	1128
BspACI	CCGC	1 cut(s)	1101
BspANI	GGCC	3 cut(s)	917, 1171, 1207
BspCNI	CTCAG	2 cut(s)	724, 1096
BspDI	ATCGAT	1 cut(s)	246
BspEI	TCCGGA	2 cut(s)	525, 662
BspHI	TCATGA	1 cut(s)	45
BspLI	GGNNCC	4 cut(s)	475, 789, 830, 1428
BspMAI	CTGCAG	2 cut(s)	472, 1420
BspMI	ACCTGC	2 cut(s)	461, 533
BspPI	GGATC	6 cut(s)	530, 1460, 1590, 1641, 1719, 1745
BspT107I	GGYRCC	1 cut(s)	473
BspTI	CTTAAG	1 cut(s)	31
BspTNI	GGTCTC	1 cut(s)	203
BsrDI	GCAATG	2 cut(s)	308, 723
BsrFI	RCCGGY	1 cut(s)	456
BsrI	ACTGG	4 cut(s)	412, 646, 676, 1552
BssAI	RCCGGY	1 cut(s)	456
BssECI	CCNNGG	2 cut(s)	1128, 1202
BssT1I	CCWWGG	1 cut(s)	1128
Bst2UI	CCWGG	3 cut(s)	240, 1181, 1203
Bst4CI	ACNGT	5 cut(s)	393, 453, 905, 1297, 1657
Bst6I	CTCTTC	4 cut(s)	135, 1162, 1356, 1806
BstAFI	CTTAAG	1 cut(s)	31
BstAPI	GCANNNNNTGC	1 cut(s)	124
BstBAI	YACGTR	1 cut(s)	965
BstC8I	GCNNGC	5 cut(s)	120, 144, 762, 915, 1007
BstDEI	CTNAG	5 cut(s)	420, 732, 1047, 1083, 1826
BstDSI	CCRYGG	1 cut(s)	1128
BstF5I	GGATG	4 cut(s)	191, 742, 1542, 1686
BstHHI	GCGC	1 cut(s)	1644
BstMAI	GTCTC	1 cut(s)	203
BstMWI	GCNNNNNNNGC	3 cut(s)	124, 152, 1079
BstNI	CCWGG	3 cut(s)	240, 1181, 1203
BstNSI	RCATGY	3 cut(s)	146, 1009, 1840
BstSCI	CCNGG	3 cut(s)	238, 1179, 1201
BstSFI	CTRYAG	6 cut(s)	449, 468, 798, 1416, 1617, 1626
BstSNI	TACGTA	1 cut(s)	965
BstV1I	GCAGC	4 cut(s)	1370, 1402, 1424, 1767
BstV2I	GAAGAC	1 cut(s)	1506
BstX2I	RGATCY	3 cut(s)	535, 1405, 1582
BstYI	RGATCY	3 cut(s)	535, 1405, 1582
Bsu15I	ATCGAT	1 cut(s)	246
Bsu36I	CCTNAGG	1 cut(s)	732
BsuI	GTATCC	3 cut(s)	95, 670, 1135
BsuRI	GGCC	3 cut(s)	917, 1171, 1207
BsuTUI	ATCGAT	1 cut(s)	246
BtgI	CCRYGG	1 cut(s)	1128
BtsCI	GGATG	4 cut(s)	191, 742, 1542, 1686
BtsI	GCAGTG	2 cut(s)	465, 1557
BtsIMutI	CAGTG	7 cut(s)	398, 405, 465, 669, 1503, 1545, 1557
BveI	ACCTGC	2 cut(s)	461, 533
Cac8I	GCNNGC	5 cut(s)	120, 144, 762, 915, 1007
CciI	TCATGA	1 cut(s)	45
CfoI	GCGC	1 cut(s)	1644
Cfr10I	RCCGGY	1 cut(s)	456
Cfr13I	GGNCC	3 cut(s)	1053, 1205, 1395
ClaI	ATCGAT	1 cut(s)	246
Csp6I	GTAC	5 cut(s)	454, 966, 1199, 1293, 1840
CspAI	ACCGGT	1 cut(s)	456
CviQI	GTAC	5 cut(s)	454, 966, 1199, 1293, 1840
DdeI	CTNAG	5 cut(s)	420, 732, 1047, 1083, 1826
EaeI	YGGCCR	1 cut(s)	915
Eam1104I	CTCTTC	4 cut(s)	135, 1162, 1356, 1806
EarI	CTCTTC	4 cut(s)	135, 1162, 1356, 1806
Ecl136II	GAGCTC	1 cut(s)	1614
Eco105I	TACGTA	1 cut(s)	965
Eco130I	CCWWGG	1 cut(s)	1128
Eco24I	GRGCYC	1 cut(s)	1616
Eco31I	GGTCTC	1 cut(s)	203
Eco47I	GGWCC	2 cut(s)	1053, 1395
Eco53kI	GAGCTC	1 cut(s)	1614
Eco57I	CTGAAG	3 cut(s)	116, 279, 1830
Eco81I	CCTNAGG	1 cut(s)	732
EcoICRI	GAGCTC	1 cut(s)	1614
EcoRI	GAATTC	1 cut(s)	1476
EcoRII	CCWGG	3 cut(s)	238, 1179, 1201
EcoT14I	CCWWGG	1 cut(s)	1128
EcoT22I	ATGCAT	2 cut(s)	6, 12
EcoT38I	GRGCYC	1 cut(s)	1616
ErhI	CCWWGG	1 cut(s)	1128
FalI	AAGNNNNNCTT	4 cut(s)	873, 905, 1690, 1722
FaqI	GGGAC	3 cut(s)	593, 652, 1174
FauNDI	CATATG	1 cut(s)	6
Fnu4HI	GCNGC	4 cut(s)	1359, 1413, 1416, 1781
FokI	GGATG	4 cut(s)	178, 749, 1549, 1693
FriOI	GRGCYC	1 cut(s)	1616
Fsp4HI	GCNGC	4 cut(s)	1359, 1413, 1416, 1781
FspBI	CTAG	2 cut(s)	287, 1802
FspI	TGCGCA	1 cut(s)	1643
GlaI	GCGC	1 cut(s)	1643
GluI	GCNGC	4 cut(s)	1359, 1413, 1416, 1781
GsaI	CCCAGC	2 cut(s)	787, 1112
HaeIII	GGCC	3 cut(s)	917, 1171, 1207
HapII	CCGG	4 cut(s)	195, 457, 526, 663
HhaI	GCGC	1 cut(s)	1644
Hin6I	GCGC	1 cut(s)	1642
HinP1I	GCGC	1 cut(s)	1642
HincII	GTYRAC	2 cut(s)	844, 1213
HindII	GTYRAC	2 cut(s)	844, 1213
HindIII	AAGCTT	3 cut(s)	422, 762, 923
HinfI	GANTC	8 cut(s)	85, 167, 243, 431, 953, 1187, 1285, 1487
HpaII	CCGG	4 cut(s)	195, 457, 526, 663
HphI	GGTGA	6 cut(s)	70, 176, 198, 578, 1115, 1607
Hpy166II	GTNNAC	4 cut(s)	844, 878, 1213, 1521
Hpy188I	TCNGA	9 cut(s)	71, 259, 940, 958, 1038, 1228, 1386, 1449, 1810
Hpy8I	GTNNAC	4 cut(s)	844, 878, 1213, 1521
HpyAV	CCTTC	7 cut(s)	254, 588, 692, 828, 832, 1526, 1598
HpyCH4III	ACNGT	5 cut(s)	393, 453, 905, 1297, 1657
HpyCH4IV	ACGT	1 cut(s)	964
HpyF10VI	GCNNNNNNNGC	3 cut(s)	124, 152, 1079
HpyF3I	CTNAG	5 cut(s)	420, 732, 1047, 1083, 1826
HpySE526I	ACGT	1 cut(s)	964
HspAI	GCGC	1 cut(s)	1642
Kpn2I	TCCGGA	2 cut(s)	525, 662
LmnI	GCTCC	3 cut(s)	733, 787, 1351
Lsp1109I	GCAGC	4 cut(s)	1370, 1402, 1424, 1767
LweI	GCATC	5 cut(s)	19, 197, 505, 1132, 1671
MaeI	CTAG	2 cut(s)	287, 1802
MaeII	ACGT	1 cut(s)	964
MaeIII	GTNAC	2 cut(s)	204, 619
MflI	RGATCY	3 cut(s)	535, 1405, 1582
MhlI	GDGCHC	1 cut(s)	1616
MlyI	GAGTC	3 cut(s)	94, 440, 1196
MmeI	TCCRAC	2 cut(s)	1284, 1798
Mph1103I	ATGCAT	2 cut(s)	6, 12
MroI	TCCGGA	2 cut(s)	525, 662
MroXI	GAANNNNTTC	1 cut(s)	924
MseI	TTAA	8 cut(s)	32, 92, 587, 695, 894, 1068, 1245, 1443
MslI	CAYNNNNRTG	2 cut(s)	501, 750
MspA1I	CMGCKG	2 cut(s)	1415, 1780
MspCI	CTTAAG	1 cut(s)	31
MspI	CCGG	4 cut(s)	195, 457, 526, 663
MspR9I	CCNGG	3 cut(s)	240, 1181, 1203
MvaI	CCWGG	3 cut(s)	240, 1181, 1203
MwoI	GCNNNNNNNGC	3 cut(s)	124, 152, 1079
NcoI	CCATGG	1 cut(s)	1128
NdeI	CATATG	1 cut(s)	6
NlaIV	GGNNCC	4 cut(s)	475, 789, 830, 1428
NmuCI	GTSAC	2 cut(s)	204, 619
NsbI	TGCGCA	1 cut(s)	1643
NsiI	ATGCAT	2 cut(s)	6, 12
NspI	RCATGY	3 cut(s)	146, 1009, 1840
PaeI	GCATGC	2 cut(s)	146, 1009
PagI	TCATGA	1 cut(s)	45
PaqCI	CACCTGC	2 cut(s)	461, 533
PdmI	GAANNNNTTC	1 cut(s)	924
PfeI	GAWTC	5 cut(s)	167, 243, 953, 1285, 1487
PfoI	TCCNGGA	2 cut(s)	238, 1179
PinAI	ACCGGT	1 cut(s)	456
PkrI	GCNGC	4 cut(s)	1360, 1414, 1417, 1782
PleI	GAGTC	3 cut(s)	93, 439, 1195
PpsI	GAGTC	3 cut(s)	93, 439, 1195
Ppu21I	YACGTR	1 cut(s)	965
Psp124BI	GAGCTC	1 cut(s)	1616
Psp6I	CCWGG	3 cut(s)	238, 1179, 1201
PspFI	CCCAGC	2 cut(s)	783, 1108
PspGI	CCWGG	3 cut(s)	238, 1179, 1201
PspN4I	GGNNCC	4 cut(s)	475, 789, 830, 1428
PspPI	GGNCC	3 cut(s)	1053, 1205, 1395
PstI	CTGCAG	2 cut(s)	472, 1420
PsuI	RGATCY	3 cut(s)	535, 1405, 1582
PvuII	CAGCTG	2 cut(s)	1415, 1780
RsaI	GTAC	5 cut(s)	455, 967, 1200, 1294, 1841
RsaNI	GTAC	5 cut(s)	454, 966, 1199, 1293, 1840
RseI	CAYNNNNRTG	2 cut(s)	501, 750
SacI	GAGCTC	1 cut(s)	1616
SaqAI	TTAA	8 cut(s)	32, 92, 587, 695, 894, 1068, 1245, 1443
SatI	GCNGC	4 cut(s)	1359, 1413, 1416, 1781
Sau96I	GGNCC	3 cut(s)	1053, 1205, 1395
SchI	GAGTC	3 cut(s)	94, 440, 1196
ScrFI	CCNGG	3 cut(s)	240, 1181, 1203
SduI	GDGCHC	1 cut(s)	1616
SfaNI	GCATC	5 cut(s)	19, 197, 505, 1132, 1671
SfcI	CTRYAG	6 cut(s)	449, 468, 798, 1416, 1617, 1626
SinI	GGWCC	2 cut(s)	1053, 1395
SmiMI	CAYNNNNRTG	2 cut(s)	501, 750
SmlI	CTYRAG	4 cut(s)	31, 200, 980, 1730
SmoI	CTYRAG	4 cut(s)	31, 200, 980, 1730
SnaBI	TACGTA	1 cut(s)	965
SphI	GCATGC	2 cut(s)	146, 1009
SsiI	CCGC	1 cut(s)	1101
SspI	AATATT	1 cut(s)	1066
SspMI	CTAG	2 cut(s)	287, 1802
SstI	GAGCTC	1 cut(s)	1616
StyD4I	CCNGG	3 cut(s)	238, 1179, 1201
StyI	CCWWGG	1 cut(s)	1128
TaaI	ACNGT	5 cut(s)	393, 453, 905, 1297, 1657
TaiI	ACGT	1 cut(s)	967
TaqI	TCGA	1 cut(s)	246
TatI	WGTACW	1 cut(s)	1839
TfiI	GAWTC	5 cut(s)	167, 243, 953, 1285, 1487
Tru1I	TTAA	8 cut(s)	32, 92, 587, 695, 894, 1068, 1245, 1443
Tru9I	TTAA	8 cut(s)	32, 92, 587, 695, 894, 1068, 1245, 1443
TscAI	CASTG	7 cut(s)	398, 412, 472, 676, 1510, 1552, 1564
TseFI	GTSAC	2 cut(s)	204, 619
TseI	GCWGC	4 cut(s)	1358, 1412, 1415, 1780
Tsp45I	GTSAC	2 cut(s)	204, 619
TspRI	CASTG	7 cut(s)	398, 412, 472, 676, 1510, 1552, 1564
Vha464I	CTTAAG	1 cut(s)	31
VpaK11BI	GGWCC	2 cut(s)	1053, 1395
XapI	RAATTY	4 cut(s)	649, 1162, 1476, 1667
XceI	RCATGY	3 cut(s)	146, 1009, 1840
XmnI	GAANNNNTTC	1 cut(s)	924
XspI	CTAG	2 cut(s)	287, 1802
Zsp2I	ATGCAT	2 cut(s)	6, 12

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.