Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0002543

Physical Location & Seq

Genomic Coordinates Forward (+)

12310803 .. 12313556

Gene Structure 2754 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0136600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2754 bp

ATGGCCAAATCTATAACAGACCTCTTAATTGGAAAAATTGTGGCAATTCTTGAGAACGAAGGAACAACCATATCCAGTGTTCGTGATGAAGTTGATAGCATTAAGGAGGAGCTTCGAAGCATGAAAGCTTTCCTAGTGGATGCAGAGGCCGACACAGTAAAAACTGAAGGAGAGAAATTGTGGGTTGAAAGCATCAGAAACTTGGCCTATGATGTTGAAGATATCATTGATGAATTCATGTATCACATGTATGAGAAGCAAAGTGGGAGTCGACTTTCAAGGAGGCTACACAAAACCATTTGCTTTCCAAAATGTCTTTGGTTTAGACGTAAAACTGCAAAGAGGTTACAAAAAATCACTAAAAAGATCAAAGACATTCCAGAGAGGAATCAAAGGTACGGTGTTGGCCTTGTAGCAGGAGCAACTACATCTGAAGATATTCACAAATTGGTGCAGAACCAAGCTGAGTCTTCGTTTTTCATTATGGAAGACGAACTGGTTGGGATTGAAGGCAAGAAGCAAATACTAATGGGATGGCTCATGGATGAAGAGCAACACCAAACTGTTATATCTGTGGTTGGCATGGGAGGTTCTGGAAAGACAACTCTAGTTGCCAAGACCTTCAACAATGAAAGGGTGAAGAGACATTTCGATTGTTATGCATGGATTACCGTTTCCCAAACGTATGCTGTGGTAGACTTGTTTCGAAGCTTGATCATGGAATTCCACAAATCAAGGAAGGAAGATTTCCCTGCAAATTTGAATGCGATGAGCCGCAAAGAATTGCTAGAGTTGCTAGTTAACTACTTGGAGTCCAATAAATACCTGGTTGTTCTAGATGACGTGTGGGATATAAAAGTTTGGAGAGAAATAAAGGTGTCACTTCAAGAAAGGCAACTCGGAAGTCGAATCATAGTTACAACTCGAAAAGAAGATGTAGCATGCAATTCTTTTGGAGTTAGAAGCCATGTTCACCATATTCAACCCCTGCTAAAGAATGAGGCTTGGGAGCTCTTCTGCAAAAAAGCATTCTCATCTAATGAGCACAAAACTTGTCCACCTGATTTTGTGTCATTAGCATGCCAACTTGTGGAGAAGTGTGATGGCCTTCCTCTGGCTATTGTGGCTTTAGGGGGTCTTATGTCTTCCAAGAAGTCGCTGGATCAATGGCAGCAAGTCTGCAACAGCCTGAATTGGCATCTAGATAACAATTCATTGCTAGACCCTGTGAAAAACATCTTGTTGCTGAGTTTCAATGATTTGCCATCTCAATTGAAACATTGCTTCTTCTATTGCTCTCTATTCCCAGAAGATTTTGTAATTAGAAGAAAAAAGCTCATTAGATTATGGATAGCTGAAGGATTTGTCGAACATGTGAAAGGGATCACGCCCGAAGAAGTTGGAGATGGCTATCTTTGGGAACTCTGCTTCCGTAGCATGTTACAAGTTGTAAAGAGAAATGGAACAGGAAGGCCGAGAAAAGTTAAGATGCATGATCTGATGCGAGAGCTTGCTTTGTCGACAGCCGAGAAGGAAAAGTTTGGTCTTATATACGACGGGAGAGAAGGAATGGAAGACATCTCAACCCGTCGCTTATCAATTCACAAAATGGAAGGAGAAATTAAATCATGGCCGGGTATGTCAAAGATTCGTTCTCTTCTTGTATTTGCAACTGGCATGTCCTCATCGTCTTTCTCAAATGCACTGGTTTCTCAATTCAAATTGTTGAGGACTCTAGACTTGGAGGATGTCCAAATTGATAAACTGCCAGATGCAGTTGTTTACTTGTTCAACTTGAGATACTTAAATTCGAAGGGCACTTTAATCGAGGAACTTCCAGAGTCCATAGGGCATCTCCGCAACCTTCAATTTTTGAAAATCGAGGAAACCAAGATAGAGGCACTTCCAGATGGAATTGCAAAATTGCTGAACCTGCGCCATCTAAGTATGTTTCGGTTGACTGGAACCAATCTGGAATTCAAACTTTATAGTGGGACAAAAGCGCCATCATATATTTGTCAGTTGCAGAAATTGCAAAGTTTAAAAACGACTGAATCAGAAGGGGACACTATTAGACTTATCGGCAACATGACTCAACTCAGGGTCATCGGCATATCGAATGTGAAAGAAAGAGATGAGATTGACTTATGGGTTTCAATTAAGAAGCTCACTCTGCTTCAATCTTTGGTTTTAATGGCAAGTAATGAAGATGAAATCCTTCCGGTGAAAGCACAATGTCCACCTCTTCCGCACCTTCAAAAGCTTAAATTGATTGGCCGACTGCAAAACGTAATACCTTGGTTTTCTTCACTGCATAGCCTCACATCTCTGTATCTGCATTGGTCAAGACTTGAAGACGATGTACTACCTCAAATTGAAGCACTGCCCAATCTGACAAGGCTTCGTCTTTGTAATGCATATGTTGGGGAAGAGTTGTGTTTCCGCAGAGGCTTTGTAAAGCTGGAGAGGTTGTATTTGTTGAATTTTGCCTCGGTGAAAAAGATTACTATAGAAAAAGGAGTGATGCCAAATCTCCACAACTTATGGGTTGAACGGTGCATGGAATTGAAGACAATGCCACTAGGCCTTGAATACCTTTCTAATATACAATCTATGGGCTTGGCATTTCTTTCCGTTGAAGTTATAAAGCCCATTCGGAAAGGAGGTGCGGATCGGTCTAAGGTACAACACATCCCCGAGATCTTACATGTTTTCGAACAGTCATCCAAGCAGGTCTACGAAAACTTGGCGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00620 map00620

Pfam Domains

Protein Families

Glyoxalase

Protein Analysis

917

Amino Acids

105.23

Weight (kDa)

8.58

Isoelectric Point (pI)

51.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rx_N	PF18052	9 - 93	2e-22	Rx N-terminal domain
NB-ARC	PF00931	172 - 347	1.2e-46	NB-ARC domain
WHD_DRP	PF23559	434 - 505	1.2e-21	Disease resistance protein Winged helix domain
LRR_14	PF23598	549 - 872	4.5e-40	Leucine-rich repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002543)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g19740 FvH4_3g19740 FvH4_3g19740
malus_domestica	MD03G1199000.v1.1 MD11G1215300.v1.1
prunus_persica	Prupe.4G216000_v2.0.a1 Prupe.4G216000_v2.0.a1
pyrus_communis	pycom03g15050
rosa_chinensis	RchiOBHm_Chr5g0033081 RchiOBHm_Chr5g0040331 RchiOBHm_Chr5g0040381
rosa_laevigata	RLG00000033447 RLG00000033972 RLG00000033973
rosa_multiflora	Rmu_sc0000986.1_g000006 Rmu_sc0004516.1_g000009
rosa_roxburghii	Rroxscaffold_1G00040330 Rroxscaffold_1G00040950 Rroxscaffold_1G00040960 Rroxscaffold_1G00046860 Rroxscaffold_1G00046970
rosa_rugosa	Rorug05G0136100 Rorug05G0136200 Rorug05G0136300 Rorug05G0136400 Rorug05G0136500 Rorug05G0136600 Rorug05G0184600 Rorug05G0184700
rosa_samantha	Rh5AG228400 Rh5AG271700 Rh5AG271900 Rh5BG229600 Rh5BG275600 Rh5BG275800 Rh5DG234400 Rh5DG283800 Rh5DG284000
rosa_wichuraiana	Rw5G020900 Rw5G025410 Rw5G025420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2645
Acc36I	ACCTGC	2 cut(s)	1941, 2722
AccB7I	CCANNNNNTGG	1 cut(s)	1090
AccI	GTMKAC	4 cut(s)	271, 696, 1520, 2736
AciI	CCGC	5 cut(s)	775, 1858, 2249, 2443, 2669
AclWI	GGATC	3 cut(s)	1170, 1391, 2679
AcoI	YGGCCR	3 cut(s)	3, 1631, 2275
AcsI	RAATTY	6 cut(s)	233, 722, 757, 1807, 1976, 2482
AcuI	CTGAAG	3 cut(s)	186, 453, 1377
AfaI	GTAC	3 cut(s)	398, 2364, 2685
AfiI	CCNNNNNNNGG	2 cut(s)	1090, 1114
AflIII	ACRYGT	4 cut(s)	246, 843, 1372, 2707
AjiI	CACGTC	1 cut(s)	844
AjnI	CCWGG	1 cut(s)	825
AjuI	GAANNNNNNNTTGG	2 cut(s)	1961, 1993
AloI	GAACNNNNNNTCC	2 cut(s)	1413, 1445
Alw21I	GWGCWC	2 cut(s)	1014, 1047
Alw26I	GTCTC	1 cut(s)	637
AlwI	GGATC	3 cut(s)	1170, 1391, 2679
Ama87I	CYCGRG	1 cut(s)	2696
AoxI	GGCC	9 cut(s)	3, 147, 204, 406, 1105, 1472, 1631, 2275, 2584
ApeKI	GCWGC	1 cut(s)	1171
ApoI	RAATTY	6 cut(s)	233, 722, 757, 1807, 1976, 2482
ArsI	GACNNNNNNTTYG	2 cut(s)	253, 285
Asp700I	GAANNNNTTC	3 cut(s)	128, 438, 2217
AspLEI	GCGC	2 cut(s)	1938, 2005
AsuC2I	CCSGG	1 cut(s)	1635
AsuHPI	GGTGA	4 cut(s)	649, 965, 2236, 2506
AsuII	TTCGAA	4 cut(s)	115, 706, 1811, 2715
AvaI	CYCGRG	1 cut(s)	2696
BaeGI	GKGCMC	1 cut(s)	1820
BalI	TGGCCA	1 cut(s)	5
BanII	GRGCYC	1 cut(s)	1014
BarI	GAAGNNNNNNTAC	2 cut(s)	2346, 2378
BbsI	GAAGAC	6 cut(s)	462, 495, 1137, 1581, 2361, 2576
Bbv12I	GWGCWC	2 cut(s)	1014, 1047
BbvI	GCAGC	1 cut(s)	1183
BccI	CCATC	7 cut(s)	528, 1097, 1273, 1400, 1904, 1947, 2014
BcgI	CGANNNNNNTGC	4 cut(s)	641, 675, 1807, 1841
BciT130I	CCWGG	1 cut(s)	827
BclI	TGATCA	1 cut(s)	714
BcnI	CCSGG	1 cut(s)	1635
BcoDI	GTCTC	1 cut(s)	637
BfaI	CTAG	9 cut(s)	134, 608, 788, 797, 836, 1202, 1220, 1736, 2582
BfmI	CTRYAG	1 cut(s)	2508
BfoI	RGCGCY	1 cut(s)	2006
BfuAI	ACCTGC	2 cut(s)	1941, 2722
BglII	AGATCT	1 cut(s)	2700
BisI	GCNGC	2 cut(s)	775, 1172
BlsI	GCNGC	2 cut(s)	776, 1173
Bme1390I	CCNGG	2 cut(s)	827, 1635
BmeT110I	CYCGRG	1 cut(s)	2696
BmgBI	CACGTC	1 cut(s)	844
BmiI	GGNNCC	1 cut(s)	1966
BmrFI	CCNGG	2 cut(s)	827, 1635
BmsI	GCATC	8 cut(s)	130, 201, 1207, 1479, 1491, 1762, 1861, 2514
BpiI	GAAGAC	6 cut(s)	462, 495, 1137, 1581, 2361, 2576
BpmI	CTGGAG	1 cut(s)	2483
Bpu14I	TTCGAA	4 cut(s)	115, 706, 1811, 2715
BpuEI	CTTGAG	2 cut(s)	71, 1816
BpuMI	CCSGG	1 cut(s)	1635
BsaBI	GATNNNNATC	1 cut(s)	1410
BsaJI	CCNNGG	2 cut(s)	2297, 2490
BsaWI	WCCGGW	1 cut(s)	2221
BsaXI	ACNNNNNCTCC	2 cut(s)	2456, 2486
Bsc4I	CCNNNNNNNGG	2 cut(s)	1090, 1114
Bse1I	ACTGG	5 cut(s)	75, 501, 1678, 1710, 1966
Bse3DI	GCAATG	2 cut(s)	1214, 1279
Bse8I	GATNNNNATC	1 cut(s)	1410
BseBI	CCWGG	1 cut(s)	827
BseDI	CCNNGG	2 cut(s)	2297, 2490
BseGI	GGATG	6 cut(s)	145, 539, 550, 1753, 2691, 2723
BseJI	GATNNNNATC	1 cut(s)	1410
BseLI	CCNNNNNNNGG	2 cut(s)	1090, 1114
BseMI	GCAATG	2 cut(s)	1214, 1279
BseMII	CTCAG	3 cut(s)	456, 1238, 2113
BseNI	ACTGG	5 cut(s)	75, 501, 1678, 1710, 1966
BseRI	GAGGAG	1 cut(s)	122
BseSI	GKGCMC	1 cut(s)	1820
BseXI	GCAGC	1 cut(s)	1183
BsgI	GTGCAG	1 cut(s)	473
BshFI	GGCC	9 cut(s)	5, 149, 206, 408, 1107, 1474, 1633, 2277, 2586
BsiHKAI	GWGCWC	2 cut(s)	1014, 1047
BsiHKCI	CYCGRG	1 cut(s)	2696
BsiSI	CCGG	2 cut(s)	1634, 2222
BslFI	GGGAC	2 cut(s)	2008, 2078
BslI	CCNNNNNNNGG	2 cut(s)	1090, 1114
BsmAI	GTCTC	1 cut(s)	637
BsmFI	GGGAC	2 cut(s)	2008, 2078
BsmI	GAATGC	2 cut(s)	769, 1028
BsnI	GGCC	9 cut(s)	5, 149, 206, 408, 1107, 1474, 1633, 2277, 2586
BsoBI	CYCGRG	1 cut(s)	2696
Bsp119I	TTCGAA	4 cut(s)	115, 706, 1811, 2715
Bsp1286I	GDGCHC	3 cut(s)	1014, 1047, 1820
Bsp143I	GATC	7 cut(s)	366, 714, 1162, 1383, 1495, 2671, 2700
BspACI	CCGC	5 cut(s)	775, 1858, 2249, 2443, 2669
BspANI	GGCC	9 cut(s)	5, 149, 206, 408, 1107, 1474, 1633, 2277, 2586
BspCNI	CTCAG	3 cut(s)	457, 1239, 2112
BspLI	GGNNCC	1 cut(s)	1966
BspMI	ACCTGC	2 cut(s)	1941, 2722
BspPI	GGATC	3 cut(s)	1170, 1391, 2679
BspQI	GCTCTTC	2 cut(s)	543, 1019
BspT104I	TTCGAA	4 cut(s)	115, 706, 1811, 2715
BsrDI	GCAATG	2 cut(s)	1214, 1279
BsrI	ACTGG	5 cut(s)	75, 501, 1678, 1710, 1966
BssECI	CCNNGG	2 cut(s)	2297, 2490
BssMI	GATC	7 cut(s)	366, 714, 1162, 1383, 1495, 2671, 2700
BssT1I	CCWWGG	1 cut(s)	2297
Bst2UI	CCWGG	1 cut(s)	827
Bst4CI	ACNGT	6 cut(s)	157, 401, 565, 673, 2556, 2721
Bst6I	CTCTTC	6 cut(s)	543, 635, 1019, 1662, 2250, 2424
BstAPI	GCANNNNNTGC	1 cut(s)	2032
BstBI	TTCGAA	4 cut(s)	115, 706, 1811, 2715
BstC8I	GCNNGC	3 cut(s)	943, 1081, 1512
BstDEI	CTNAG	5 cut(s)	465, 1247, 1943, 2099, 2679
BstF5I	GGATG	6 cut(s)	145, 539, 550, 1753, 2691, 2723
BstH2I	RGCGCY	1 cut(s)	2006
BstHHI	GCGC	2 cut(s)	1938, 2005
BstKTI	GATC	7 cut(s)	369, 717, 1165, 1386, 1498, 2674, 2703
BstMAI	GTCTC	1 cut(s)	637
BstMBI	GATC	7 cut(s)	366, 714, 1162, 1383, 1495, 2671, 2700
BstMWI	GCNNNNNNNGC	6 cut(s)	793, 1124, 1434, 1933, 2032, 2173
BstNI	CCWGG	1 cut(s)	827
BstNSI	RCATGY	7 cut(s)	250, 945, 1083, 1376, 1441, 1681, 2711
BstSCI	CCNGG	2 cut(s)	825, 1633
BstSFI	CTRYAG	1 cut(s)	2508
BstSLI	GKGCMC	1 cut(s)	1820
BstV1I	GCAGC	1 cut(s)	1183
BstV2I	GAAGAC	6 cut(s)	462, 495, 1137, 1581, 2361, 2576
BstX2I	RGATCY	1 cut(s)	2700
BstYI	RGATCY	1 cut(s)	2700
BsuRI	GGCC	9 cut(s)	5, 149, 206, 408, 1107, 1474, 1633, 2277, 2586
BtgZI	GCGATG	1 cut(s)	782
BtrI	CACGTC	1 cut(s)	844
BtsCI	GGATG	6 cut(s)	145, 539, 550, 1753, 2691, 2723
BtsI	GCAGTG	2 cut(s)	2309, 2381
BtsIMutI	CAGTG	4 cut(s)	82, 1703, 2309, 2381
BveI	ACCTGC	2 cut(s)	1941, 2722
Cac8I	GCNNGC	3 cut(s)	943, 1081, 1512
CfoI	GCGC	2 cut(s)	1938, 2005
CsiI	ACCWGGT	1 cut(s)	825
Csp6I	GTAC	3 cut(s)	397, 2363, 2684
CviQI	GTAC	3 cut(s)	397, 2363, 2684
DdeI	CTNAG	5 cut(s)	465, 1247, 1943, 2099, 2679
DpnI	GATC	7 cut(s)	368, 716, 1164, 1385, 1497, 2673, 2702
DpnII	GATC	7 cut(s)	366, 714, 1162, 1383, 1495, 2671, 2700
DraI	TTTAAA	1 cut(s)	2043
EaeI	YGGCCR	3 cut(s)	3, 1631, 2275
Eam1104I	CTCTTC	6 cut(s)	543, 635, 1019, 1662, 2250, 2424
EarI	CTCTTC	6 cut(s)	543, 635, 1019, 1662, 2250, 2424
Ecl136II	GAGCTC	1 cut(s)	1012
Eco130I	CCWWGG	1 cut(s)	2297
Eco147I	AGGCCT	1 cut(s)	2586
Eco24I	GRGCYC	1 cut(s)	1014
Eco32I	GATATC	1 cut(s)	223
Eco53kI	GAGCTC	1 cut(s)	1012
Eco57I	CTGAAG	3 cut(s)	186, 453, 1377
Eco88I	CYCGRG	1 cut(s)	2696
EcoICRI	GAGCTC	1 cut(s)	1012
EcoRI	GAATTC	3 cut(s)	233, 722, 1976
EcoRII	CCWGG	1 cut(s)	825
EcoRV	GATATC	1 cut(s)	223
EcoT14I	CCWWGG	1 cut(s)	2297
EcoT22I	ATGCAT	3 cut(s)	664, 1494, 2419
EcoT38I	GRGCYC	1 cut(s)	1014
ErhI	CCWWGG	1 cut(s)	2297
FaqI	GGGAC	2 cut(s)	2008, 2078
FauNDI	CATATG	1 cut(s)	2419
FbaI	TGATCA	1 cut(s)	714
FblI	GTMKAC	4 cut(s)	271, 696, 1520, 2736
Fnu4HI	GCNGC	2 cut(s)	775, 1172
FokI	GGATG	6 cut(s)	152, 546, 557, 1760, 2678, 2710
FriOI	GRGCYC	1 cut(s)	1014
Fsp4HI	GCNGC	2 cut(s)	775, 1172
FspBI	CTAG	9 cut(s)	134, 608, 788, 797, 836, 1202, 1220, 1736, 2582
GlaI	GCGC	2 cut(s)	1937, 2004
GluI	GCNGC	2 cut(s)	775, 1172
GsuI	CTGGAG	1 cut(s)	2483
HaeII	RGCGCY	1 cut(s)	2006
HaeIII	GGCC	9 cut(s)	5, 149, 206, 408, 1107, 1474, 1633, 2277, 2586
HapII	CCGG	2 cut(s)	1634, 2222
HhaI	GCGC	2 cut(s)	1938, 2005
Hin6I	GCGC	2 cut(s)	1936, 2003
HinP1I	GCGC	2 cut(s)	1936, 2003
HincII	GTYRAC	4 cut(s)	272, 802, 1521, 1959
HindII	GTYRAC	4 cut(s)	272, 802, 1521, 1959
HindIII	AAGCTT	3 cut(s)	126, 709, 2261
HpaI	GTTAAC	1 cut(s)	802
HpaII	CCGG	2 cut(s)	1634, 2222
HphI	GGTGA	4 cut(s)	649, 965, 2236, 2506
Hpy188I	TCNGA	7 cut(s)	197, 433, 902, 1500, 2059, 2394, 2658
Hpy99I	CGWCG	2 cut(s)	1559, 1593
HpyCH4III	ACNGT	6 cut(s)	157, 401, 565, 673, 2556, 2721
HpyCH4IV	ACGT	4 cut(s)	328, 683, 843, 2289
HpyF10VI	GCNNNNNNNGC	6 cut(s)	793, 1124, 1434, 1933, 2032, 2173
HpyF3I	CTNAG	5 cut(s)	465, 1247, 1943, 2099, 2679
HpySE526I	ACGT	4 cut(s)	328, 683, 843, 2289
HspAI	GCGC	2 cut(s)	1936, 2003
Ksp22I	TGATCA	1 cut(s)	714
KspAI	GTTAAC	1 cut(s)	802
Kzo9I	GATC	7 cut(s)	366, 714, 1162, 1383, 1495, 2671, 2700
LguI	GCTCTTC	2 cut(s)	543, 1019
LmnI	GCTCC	3 cut(s)	109, 419, 1009
Lsp1109I	GCAGC	1 cut(s)	1183
LweI	GCATC	8 cut(s)	130, 201, 1207, 1479, 1491, 1762, 1861, 2514
MabI	ACCWGGT	1 cut(s)	825
MaeI	CTAG	9 cut(s)	134, 608, 788, 797, 836, 1202, 1220, 1736, 2582
MaeII	ACGT	4 cut(s)	328, 683, 843, 2289
MaeIII	GTNAC	4 cut(s)	345, 879, 916, 1440
MalI	GATC	7 cut(s)	368, 716, 1164, 1385, 1497, 2673, 2702
MboI	GATC	7 cut(s)	366, 714, 1162, 1383, 1495, 2671, 2700
MfeI	CAATTG	1 cut(s)	1271
MflI	RGATCY	1 cut(s)	2700
MhlI	GDGCHC	3 cut(s)	1014, 1047, 1820
MlsI	TGGCCA	1 cut(s)	5
MluNI	TGGCCA	1 cut(s)	5
MlyI	GAGTC	6 cut(s)	277, 476, 821, 1726, 1850, 2086
MmeI	TCCRAC	1 cut(s)	1381
Mox20I	TGGCCA	1 cut(s)	5
Mph1103I	ATGCAT	3 cut(s)	664, 1494, 2419
MroXI	GAANNNNTTC	3 cut(s)	128, 438, 2217
MscI	TGGCCA	1 cut(s)	5
MslI	CAYNNNNRTG	2 cut(s)	249, 1078
Msp20I	TGGCCA	1 cut(s)	5
MspI	CCGG	2 cut(s)	1634, 2222
MspR9I	CCNGG	2 cut(s)	827, 1635
MunI	CAATTG	1 cut(s)	1271
Mva1269I	GAATGC	2 cut(s)	769, 1028
MvaI	CCWGG	1 cut(s)	827
MwoI	GCNNNNNNNGC	6 cut(s)	793, 1124, 1434, 1933, 2032, 2173
NciI	CCSGG	1 cut(s)	1635
NdeI	CATATG	1 cut(s)	2419
NdeII	GATC	7 cut(s)	366, 714, 1162, 1383, 1495, 2671, 2700
NlaIV	GGNNCC	1 cut(s)	1966
NmeAIII	GCCGAG	2 cut(s)	1500, 1552
NmuCI	GTSAC	1 cut(s)	879
NsiI	ATGCAT	3 cut(s)	664, 1494, 2419
NspI	RCATGY	7 cut(s)	250, 945, 1083, 1376, 1441, 1681, 2711
NspV	TTCGAA	4 cut(s)	115, 706, 1811, 2715
PaeI	GCATGC	2 cut(s)	945, 1083
PceI	AGGCCT	1 cut(s)	2586
PciI	ACATGT	3 cut(s)	246, 1372, 2707
PciSI	GCTCTTC	2 cut(s)	543, 1019
PctI	GAATGC	2 cut(s)	769, 1028
PdmI	GAANNNNTTC	3 cut(s)	128, 438, 2217
PfeI	GAWTC	4 cut(s)	388, 909, 1648, 2054
PflMI	CCANNNNNTGG	1 cut(s)	1090
PkrI	GCNGC	2 cut(s)	776, 1173
PleI	GAGTC	6 cut(s)	276, 475, 820, 1726, 1849, 2086
PpsI	GAGTC	6 cut(s)	276, 475, 820, 1726, 1849, 2086
PscI	ACATGT	3 cut(s)	246, 1372, 2707
PsiI	TTATAA	1 cut(s)	2645
Psp124BI	GAGCTC	1 cut(s)	1014
Psp6I	CCWGG	1 cut(s)	825
PspGI	CCWGG	1 cut(s)	825
PspN4I	GGNNCC	1 cut(s)	1966
PsuI	RGATCY	1 cut(s)	2700
RsaI	GTAC	3 cut(s)	398, 2364, 2685
RsaNI	GTAC	3 cut(s)	397, 2363, 2684
RseI	CAYNNNNRTG	2 cut(s)	249, 1078
SacI	GAGCTC	1 cut(s)	1014
SalI	GTCGAC	2 cut(s)	270, 1519
SapI	GCTCTTC	2 cut(s)	543, 1019
SatI	GCNGC	2 cut(s)	775, 1172
Sau3AI	GATC	7 cut(s)	366, 714, 1162, 1383, 1495, 2671, 2700
SchI	GAGTC	6 cut(s)	277, 476, 821, 1726, 1850, 2086
ScrFI	CCNGG	2 cut(s)	827, 1635
SduI	GDGCHC	3 cut(s)	1014, 1047, 1820
SexAI	ACCWGGT	1 cut(s)	825
SfaNI	GCATC	8 cut(s)	130, 201, 1207, 1479, 1491, 1762, 1861, 2514
SfcI	CTRYAG	1 cut(s)	2508
SfuI	TTCGAA	4 cut(s)	115, 706, 1811, 2715
SmiMI	CAYNNNNRTG	2 cut(s)	249, 1078
SmlI	CTYRAG	2 cut(s)	50, 1795
SmoI	CTYRAG	2 cut(s)	50, 1795
SphI	GCATGC	2 cut(s)	945, 1083
SseBI	AGGCCT	1 cut(s)	2586
SsiI	CCGC	5 cut(s)	775, 1858, 2249, 2443, 2669
SspMI	CTAG	9 cut(s)	134, 608, 788, 797, 836, 1202, 1220, 1736, 2582
SstI	GAGCTC	1 cut(s)	1014
StuI	AGGCCT	1 cut(s)	2586
StyD4I	CCNGG	2 cut(s)	825, 1633
StyI	CCWWGG	1 cut(s)	2297
TaaI	ACNGT	6 cut(s)	157, 401, 565, 673, 2556, 2721
TaiI	ACGT	4 cut(s)	331, 686, 846, 2292
TaqII	GACCGA	1 cut(s)	2664
TatI	WGTACW	1 cut(s)	2362
TauI	GCSGC	1 cut(s)	777
TfiI	GAWTC	4 cut(s)	388, 909, 1648, 2054
TscAI	CASTG	4 cut(s)	82, 1710, 2316, 2388
TseFI	GTSAC	1 cut(s)	879
TseI	GCWGC	1 cut(s)	1171
Tsp45I	GTSAC	1 cut(s)	879
TspGWI	ACGGA	2 cut(s)	1421, 2623
TspRI	CASTG	4 cut(s)	82, 1710, 2316, 2388
Van91I	CCANNNNNTGG	1 cut(s)	1090
XapI	RAATTY	6 cut(s)	233, 722, 757, 1807, 1976, 2482
XbaI	TCTAGA	3 cut(s)	835, 1201, 1735
XceI	RCATGY	7 cut(s)	250, 945, 1083, 1376, 1441, 1681, 2711
XcmI	CCANNNNNNNNNTGG	3 cut(s)	315, 823, 1156
XmiI	GTMKAC	4 cut(s)	271, 696, 1520, 2736
XmnI	GAANNNNTTC	3 cut(s)	128, 438, 2217
XspI	CTAG	9 cut(s)	134, 608, 788, 797, 836, 1202, 1220, 1736, 2582
Zsp2I	ATGCAT	3 cut(s)	664, 1494, 2419

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.