Rh5DG283800

lactoylglutathione

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
OG0002543
Physical Location & Seq
Reverse (-)
34938330 .. 34941165
2836 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG283800.1

Sequence Viewer

Length: 948 bp
ATGGTGAAGAACCAGCAGTTGGTCTACAGCTGTATTCTTTTGTTCATCTGTTTGATTGATTTAAGCAATGCAGCTCGCAGTAATCCCCCTGACGATGTTTTGGAATGGGTTCAAAAAGATGATCGCCGTTTCCTGCGTGCCAATATCAGAGTTGGTGATCTTAATCGAACCATCAAGTTTTACACCGAGTTTTTTGGGATGGAAGTGTTGAGCAGAAAAGATTTTCCAAAAGTAAATATCTCAAATGCAGTCATTGGGTTCGGATCTGAAGAGACTCAATTTGTTCTGGGACTCACCCAACACCACAGTGCAGTTGACAAATTGGAGCTCGGAACAGCCTTCAATCATTTCGGAATTACAACTCAAGATATTTATACAATGGTTGAAAAAATTCGAGCTGCTGGTGGGGTGATCACTCGTGAACCAGGGCCAGTTGCACCCGGCGGAACTACCATCTACGCCTTTGTGAACGATCCCGATGGCTACAGTTTCGAGCTCTTCCTCAGGCCGCCAACTCCAGAACCACTTAATCATATATGTCTTAACGTGGTTGACATTGATCGTTCTATTGACTTCTACCAAAAGGCTTTGGGAATGAACTTACTAGTGCCAAAGTACAACAATGCTCAAGAGCAGTATACTGTAGCTATGGTGGGCTATGGATCCAACTATACTCAGACGACCGTCATCGAGCTGCAATATAACTATAATGTGACAGATTATACCAAAGGAAATGGATATGCACAGGTAGCTATTGGCACCGATGATGTATACAAGAGTGCAGCAGTTGTTGACCAGGTTATCCAGGAACTTGGTGGGAAAATAATTCAACCACCAGGTCCAATTCCATTTATCAAGACCAAAATCACTGCATTCCTTGATTCAGATGGCTTTGAAACGGTGTTGGTGGACAATGAAGATTATCTTAAATATCTGAAGGAAGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00620 map00620
Pfam Domains
Protein Families
Glyoxalase

Protein Analysis

315

Amino Acids

35.31

Weight (kDa)

4.85

Isoelectric Point (pI)

30.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyoxalase PF00903 45 - 166 2.2e-17 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Glyoxalase_4 PF13669 49 - 147 1e-05 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Glyoxalase PF00903 176 - 299 2.3e-12 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 758
AccB7I CCANNNNNTGG 1 cut(s) 19
AccI GTMKAC 3 cut(s) 24, 638, 771
AciI CCGC 2 cut(s) 444, 509
AclWI GGATC 4 cut(s) 271, 467, 657, 670
AcsI RAATTY 1 cut(s) 390
AcuI CTGAAG 1 cut(s) 288
AfaI GTAC 1 cut(s) 617
AfiI CCNNNNNNNGG 1 cut(s) 19
AgsI TTSAA 5 cut(s) 113, 343, 386, 830, 896
AhlI ACTAGT 1 cut(s) 604
AjnI CCWGG 4 cut(s) 424, 795, 804, 835
AjuI GAANNNNNNNTTGG 1 cut(s) 34
AleI CACNNNNGTG 1 cut(s) 306
AluBI AGCT 8 cut(s) 30, 74, 328, 398, 496, 647, 694, 752
AluI AGCT 8 cut(s) 30, 74, 328, 398, 496, 647, 694, 752
Alw21I GWGCWC 2 cut(s) 330, 498
Alw26I GTCTC 1 cut(s) 266
AlwI GGATC 4 cut(s) 271, 467, 657, 670
AoxI GGCC 2 cut(s) 428, 506
ApeKI GCWGC 4 cut(s) 71, 398, 694, 782
ApoI RAATTY 1 cut(s) 390
Asp700I GAANNNNTTC 2 cut(s) 108, 390
AspS9I GGNCC 2 cut(s) 428, 839
AsuC2I CCSGG 1 cut(s) 441
AsuHPI GGTGA 4 cut(s) 16, 167, 286, 421
AvaII GGWCC 1 cut(s) 839
AxyI CCTNAGG 1 cut(s) 503
BamHI GGATCC 1 cut(s) 662
BanI GGYRCC 1 cut(s) 758
BanII GRGCYC 2 cut(s) 330, 498
BauI CACGAG 1 cut(s) 417
Bbv12I GWGCWC 2 cut(s) 330, 498
BbvI GCAGC 4 cut(s) 83, 385, 681, 794
BccI CCATC 5 cut(s) 179, 193, 461, 473, 881
BceAI ACGGC 1 cut(s) 111
BciT130I CCWGG 4 cut(s) 426, 797, 806, 837
BclI TGATCA 1 cut(s) 411
BcnI CCSGG 1 cut(s) 441
BcoDI GTCTC 1 cut(s) 266
BcuI ACTAGT 1 cut(s) 604
BfaI CTAG 1 cut(s) 605
BfmI CTRYAG 3 cut(s) 25, 484, 642
BisI GCNGC 5 cut(s) 72, 399, 509, 695, 783
BlsI GCNGC 5 cut(s) 73, 400, 510, 696, 784
Bme1390I CCNGG 5 cut(s) 426, 441, 797, 806, 837
Bme18I GGWCC 1 cut(s) 839
BmgT120I GGNCC 2 cut(s) 428, 839
BmiI GGNNCC 2 cut(s) 664, 760
BmrFI CCNGG 5 cut(s) 426, 441, 797, 806, 837
BoxI GACNNNNGTC 1 cut(s) 683
BpmI CTGGAG 1 cut(s) 501
BpuEI CTTGAG 2 cut(s) 348, 612
BpuMI CCSGG 1 cut(s) 441
BsaBI GATNNNNATC 1 cut(s) 162
BsaJI CCNNGG 1 cut(s) 425
Bsc4I CCNNNNNNNGG 1 cut(s) 19
Bse1I ACTGG 1 cut(s) 431
Bse21I CCTNAGG 1 cut(s) 503
Bse3DI GCAATG 1 cut(s) 73
Bse8I GATNNNNATC 1 cut(s) 162
BseBI CCWGG 4 cut(s) 426, 797, 806, 837
BseDI CCNNGG 1 cut(s) 425
BseGI GGATG 1 cut(s) 204
BseJI GATNNNNATC 1 cut(s) 162
BseLI CCNNNNNNNGG 1 cut(s) 19
BseMI GCAATG 1 cut(s) 73
BseMII CTCAG 2 cut(s) 517, 689
BseNI ACTGG 1 cut(s) 431
BseXI GCAGC 4 cut(s) 83, 385, 681, 794
BsgI GTGCAG 2 cut(s) 330, 801
Bsh1285I CGRYCG 1 cut(s) 684
BshFI GGCC 2 cut(s) 430, 508
BshNI GGYRCC 1 cut(s) 758
BsiEI CGRYCG 1 cut(s) 684
BsiHKAI GWGCWC 2 cut(s) 330, 498
BsiSI CCGG 1 cut(s) 441
BslFI GGGAC 1 cut(s) 303
BslI CCNNNNNNNGG 1 cut(s) 19
BsmAI GTCTC 1 cut(s) 266
BsmFI GGGAC 1 cut(s) 303
BsmI GAATGC 1 cut(s) 872
BsnI GGCC 2 cut(s) 430, 508
Bsp1286I GDGCHC 2 cut(s) 330, 498
Bsp143I GATC 7 cut(s) 121, 157, 263, 411, 472, 559, 662
BspACI CCGC 2 cut(s) 444, 509
BspANI GGCC 2 cut(s) 430, 508
BspCNI CTCAG 2 cut(s) 516, 688
BspLI GGNNCC 2 cut(s) 664, 760
BspPI GGATC 4 cut(s) 271, 467, 657, 670
BspQI GCTCTTC 1 cut(s) 503
BspT107I GGYRCC 1 cut(s) 758
BsrDI GCAATG 1 cut(s) 73
BsrI ACTGG 1 cut(s) 431
BssECI CCNNGG 1 cut(s) 425
BssMI GATC 7 cut(s) 121, 157, 263, 411, 472, 559, 662
BssNAI GTATAC 2 cut(s) 639, 772
BssSI CACGAG 1 cut(s) 417
Bst1107I GTATAC 2 cut(s) 639, 772
Bst2BI CACGAG 1 cut(s) 417
Bst2UI CCWGG 4 cut(s) 426, 797, 806, 837
Bst4CI ACNGT 5 cut(s) 308, 488, 643, 685, 901
Bst6I CTCTTC 3 cut(s) 264, 503, 936
BstC8I GCNNGC 2 cut(s) 76, 138
BstDEI CTNAG 2 cut(s) 503, 675
BstF5I GGATG 1 cut(s) 204
BstKTI GATC 7 cut(s) 124, 160, 266, 414, 475, 562, 665
BstMAI GTCTC 1 cut(s) 266
BstMBI GATC 7 cut(s) 121, 157, 263, 411, 472, 559, 662
BstMCI CGRYCG 1 cut(s) 684
BstMWI GCNNNNNNNGC 1 cut(s) 749
BstNI CCWGG 4 cut(s) 426, 797, 806, 837
BstPAI GACNNNNGTC 1 cut(s) 683
BstSCI CCNGG 5 cut(s) 424, 439, 795, 804, 835
BstSFI CTRYAG 3 cut(s) 25, 484, 642
BstV1I GCAGC 4 cut(s) 83, 385, 681, 794
BstX2I RGATCY 2 cut(s) 263, 662
BstXI CCANNNNNNTGG 1 cut(s) 812
BstYI RGATCY 2 cut(s) 263, 662
BstZ17I GTATAC 2 cut(s) 639, 772
Bsu36I CCTNAGG 1 cut(s) 503
BsuRI GGCC 2 cut(s) 430, 508
BtsCI GGATG 1 cut(s) 204
BtsI GCAGTG 1 cut(s) 867
BtsIMutI CAGTG 2 cut(s) 313, 867
Cac8I GCNNGC 2 cut(s) 76, 138
Cfr13I GGNCC 2 cut(s) 428, 839
CsiI ACCWGGT 2 cut(s) 795, 835
Csp6I GTAC 1 cut(s) 616
CviQI GTAC 1 cut(s) 616
DdeI CTNAG 2 cut(s) 503, 675
DpnI GATC 7 cut(s) 123, 159, 265, 413, 474, 561, 664
DpnII GATC 7 cut(s) 121, 157, 263, 411, 472, 559, 662
Eam1104I CTCTTC 3 cut(s) 264, 503, 936
EarI CTCTTC 3 cut(s) 264, 503, 936
EciI GGCGGA 1 cut(s) 459
Ecl136II GAGCTC 2 cut(s) 328, 496
Eco24I GRGCYC 2 cut(s) 330, 498
Eco47I GGWCC 1 cut(s) 839
Eco53kI GAGCTC 2 cut(s) 328, 496
Eco57I CTGAAG 1 cut(s) 288
Eco81I CCTNAGG 1 cut(s) 503
EcoICRI GAGCTC 2 cut(s) 328, 496
EcoRII CCWGG 4 cut(s) 424, 795, 804, 835
EcoT38I GRGCYC 2 cut(s) 330, 498
FalI AAGNNNNNCTT 2 cut(s) 909, 941
FaqI GGGAC 1 cut(s) 303
FbaI TGATCA 1 cut(s) 411
FblI GTMKAC 3 cut(s) 24, 638, 771
Fnu4HI GCNGC 5 cut(s) 72, 399, 509, 695, 783
FokI GGATG 1 cut(s) 211
FriOI GRGCYC 2 cut(s) 330, 498
Fsp4HI GCNGC 5 cut(s) 72, 399, 509, 695, 783
FspBI CTAG 1 cut(s) 605
GluI GCNGC 5 cut(s) 72, 399, 509, 695, 783
GsuI CTGGAG 1 cut(s) 501
HaeIII GGCC 2 cut(s) 430, 508
HapII CCGG 1 cut(s) 441
HincII GTYRAC 3 cut(s) 316, 553, 793
HindII GTYRAC 3 cut(s) 316, 553, 793
HinfI GANTC 3 cut(s) 274, 291, 881
HpaII CCGG 1 cut(s) 441
HphI GGTGA 4 cut(s) 16, 167, 286, 421
Hpy166II GTNNAC 9 cut(s) 25, 316, 422, 469, 553, 639, 772, 793, 910
Hpy188I TCNGA 8 cut(s) 149, 263, 268, 332, 353, 678, 886, 936
Hpy188III TCNNGA 6 cut(s) 365, 419, 476, 518, 629, 856
Hpy8I GTNNAC 9 cut(s) 25, 316, 422, 469, 553, 639, 772, 793, 910
HpyAV CCTTC 2 cut(s) 349, 931
HpyCH4III ACNGT 5 cut(s) 308, 488, 643, 685, 901
HpyCH4IV ACGT 1 cut(s) 546
HpyCH4V TGCA 8 cut(s) 71, 248, 311, 437, 697, 743, 782, 872
HpyF10VI GCNNNNNNNGC 1 cut(s) 749
HpyF3I CTNAG 2 cut(s) 503, 675
HpySE526I ACGT 1 cut(s) 546
Ksp22I TGATCA 1 cut(s) 411
Kzo9I GATC 7 cut(s) 121, 157, 263, 411, 472, 559, 662
LguI GCTCTTC 1 cut(s) 503
LmnI GCTCC 1 cut(s) 325
Lsp1109I GCAGC 4 cut(s) 83, 385, 681, 794
MabI ACCWGGT 2 cut(s) 795, 835
MaeI CTAG 1 cut(s) 605
MaeII ACGT 1 cut(s) 546
MaeIII GTNAC 1 cut(s) 712
MalI GATC 7 cut(s) 123, 159, 265, 413, 474, 561, 664
MboI GATC 7 cut(s) 121, 157, 263, 411, 472, 559, 662
MboII GAAGA 4 cut(s) 19, 281, 490, 929
MflI RGATCY 2 cut(s) 263, 662
MhlI GDGCHC 2 cut(s) 330, 498
MluCI AATT 6 cut(s) 278, 320, 354, 390, 825, 843
MlyI GAGTC 2 cut(s) 268, 285
MmeI TCCRAC 1 cut(s) 690
MnlI CCTC 1 cut(s) 512
MroXI GAANNNNTTC 2 cut(s) 108, 390
MseI TTAA 5 cut(s) 62, 162, 528, 543, 927
MslI CAYNNNNRTG 1 cut(s) 306
MspA1I CMGCKG 1 cut(s) 30
MspI CCGG 1 cut(s) 441
MspR9I CCNGG 5 cut(s) 426, 441, 797, 806, 837
Mva1269I GAATGC 1 cut(s) 872
MvaI CCWGG 4 cut(s) 426, 797, 806, 837
MwoI GCNNNNNNNGC 1 cut(s) 749
NciI CCSGG 1 cut(s) 441
NdeII GATC 7 cut(s) 121, 157, 263, 411, 472, 559, 662
NlaIV GGNNCC 2 cut(s) 664, 760
NmuCI GTSAC 1 cut(s) 712
OliI CACNNNNGTG 1 cut(s) 306
PciSI GCTCTTC 1 cut(s) 503
PctI GAATGC 1 cut(s) 872
PdmI GAANNNNTTC 2 cut(s) 108, 390
PfeI GAWTC 1 cut(s) 881
PflMI CCANNNNNTGG 1 cut(s) 19
PfoI TCCNGGA 1 cut(s) 804
PkrI GCNGC 5 cut(s) 73, 400, 510, 696, 784
PleI GAGTC 2 cut(s) 268, 285
PpsI GAGTC 2 cut(s) 268, 285
PshAI GACNNNNGTC 1 cut(s) 683
Psp124BI GAGCTC 2 cut(s) 330, 498
Psp6I CCWGG 4 cut(s) 424, 795, 804, 835
PspGI CCWGG 4 cut(s) 424, 795, 804, 835
PspN4I GGNNCC 2 cut(s) 664, 760
PspPI GGNCC 2 cut(s) 428, 839
PsuI RGATCY 2 cut(s) 263, 662
PvuII CAGCTG 1 cut(s) 30
RsaI GTAC 1 cut(s) 617
RsaNI GTAC 1 cut(s) 616
RseI CAYNNNNRTG 1 cut(s) 306
SacI GAGCTC 2 cut(s) 330, 498
SapI GCTCTTC 1 cut(s) 503
SaqAI TTAA 5 cut(s) 62, 162, 528, 543, 927
SatI GCNGC 5 cut(s) 72, 399, 509, 695, 783
Sau3AI GATC 7 cut(s) 121, 157, 263, 411, 472, 559, 662
Sau96I GGNCC 2 cut(s) 428, 839
SchI GAGTC 2 cut(s) 268, 285
ScrFI CCNGG 5 cut(s) 426, 441, 797, 806, 837
SduI GDGCHC 2 cut(s) 330, 498
SexAI ACCWGGT 2 cut(s) 795, 835
SfcI CTRYAG 3 cut(s) 25, 484, 642
SinI GGWCC 1 cut(s) 839
SmiMI CAYNNNNRTG 1 cut(s) 306
SmlI CTYRAG 2 cut(s) 363, 627
SmoI CTYRAG 2 cut(s) 363, 627
SpeI ACTAGT 1 cut(s) 604
Sse9I AATT 6 cut(s) 278, 320, 354, 390, 825, 843
SsiI CCGC 2 cut(s) 444, 509
SspMI CTAG 1 cut(s) 605
SstI GAGCTC 2 cut(s) 330, 498
StyD4I CCNGG 5 cut(s) 424, 439, 795, 804, 835
TaaI ACNGT 5 cut(s) 308, 488, 643, 685, 901
TaiI ACGT 1 cut(s) 549
TaqI TCGA 4 cut(s) 166, 394, 492, 690
TasI AATT 6 cut(s) 278, 320, 354, 390, 825, 843
TatI WGTACW 1 cut(s) 615
TauI GCSGC 1 cut(s) 511
TfiI GAWTC 1 cut(s) 881
Tru1I TTAA 5 cut(s) 62, 162, 528, 543, 927
Tru9I TTAA 5 cut(s) 62, 162, 528, 543, 927
TscAI CASTG 2 cut(s) 313, 874
TseFI GTSAC 1 cut(s) 712
TseI GCWGC 4 cut(s) 71, 398, 694, 782
Tsp45I GTSAC 1 cut(s) 712
TspDTI ATGAA 3 cut(s) 34, 611, 930
TspRI CASTG 2 cut(s) 313, 874
Van91I CCANNNNNTGG 1 cut(s) 19
VpaK11BI GGWCC 1 cut(s) 839
XapI RAATTY 1 cut(s) 390
XcmI CCANNNNNNNNNTGG 1 cut(s) 812
XmiI GTMKAC 3 cut(s) 24, 638, 771
XmnI GAANNNNTTC 2 cut(s) 108, 390
XspI CTAG 1 cut(s) 605
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.