Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0001903

Physical Location & Seq

Genomic Coordinates Reverse (-)

22189013 .. 22191724

Gene Structure 2712 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0215200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1683 bp

ATGGACCACATCCAGACCGACGCCGATGAGGTCCCGATGACTCTCCAGAACACCGAAACTCAAGATTCCTGTTCCGATTGCGATACCGTCCGCTCCGAATCGAATTCCTCTTCTTCTGAAGAAATCGAAATCGATCAGGATTCCCAGTCCGATTGCGAATCGGAGTCGCCGGTTTCCGATCCGTTTGGGGCTTTCACTGAAAACGAAATGACGGTTAGAGCGGAGAGCCTGGAGCGTGAGACTATTACGAAGAGCTTCGTCTCCGGTATGGGACCCGCCGGCGGAGAAACCAGAGTGTTGGCTGTGCATAAGAATTCGAGTTCTGGTCTGACACGGCGGGCGAGGTTCGACTCGTTTCGGGTTTTCACGGAGGCGGTGGCTCGGAAATGCGGCGGGAATCCGAATATTAAGTATGGTTGGTACGGCGGATCGAAGGATGAGATCGCTGAGATTTTGGTTCATGGATTTAGTGCTAAGAATGAAAAGGCTGGTGGTAGAATACAATTGGTTCCGGTGAAATTCGCTCTGGATGCTGCGGTGGGTTCTGGTGTTGATGAAGATGGGATGAGGCATGTGCTGATGTGCCGGGTTATACTGGGGAAGAGTGAGTTGATGCCTAATGGTTCGGATCAAATTCGGCCCCGTTCGAGTGAGTTTGATTCTGGTGTGGATAGTCTGGTGACCCCTAGGAAGTATATTGTGTGGAGTAATTTGATGAACTCGCATATCTGTCCTGCTTATGTTGTGAGCTTCAAGGCTCCTGGTTGCTTAGAGAAGTATGCAGCTCCTCCTCAGAAGATTATTAGCTTCCTTGATCTGTTGCCTGTGCTCGCTAGGTTCTTGCCTCCTCCGAAAATGGCTGTGCTGTACCAATTGCGTGATGATTACAGGGACAAGAAGATTAGTTTAGCTGAGCTGCATCGGAAGTTGAAGCGAGAAGTTGATGGGAAGGTTCTGGCTTCTGCGATGAAATTGGTGACACCTAGACAGCAGGGGAATGCTGGTGCTTTTCCTGCTCCTGGAACTGTTAATTTGCCACATTTGATGAAAGTGCTACCGTTGTTGTTACCTGCTTCGGAAATGGCTGTAGTTGCCAAATTGCGCGACGATTACTTGGCAAAGAAGATTAGCCTGGCTGAGGTGAGTCGACAAGTGAGACTCATAGTTGATAAAAAGGTTATGGCTTCCGCCATGAAATTGATGAAACCTGCTCAGAGAAGTTCTGGTTTACACCGCGGAGCTCTTGTGATGACCGCGCTGGCTAGGTTCTTGCCTCCTTCACAGATGAAAATACTTGGCAGATTGATCATGGATTTCAGGGCAAAGAAGATTAGTGGAGATGAGTTGGATCGAAAATTTAAGCTCATAGTTGATGACAAGGTGTTGGCCTCAGCTATCAAATTGGTGACACCAAGTACTCAGCAGAGGAGTAACACTGCTAGTGATATTAGAGATCTTTTGAAGGTGCCAAATTCTTCAATATATTTCCCTGCTCTGATGCCCGTGTTGGAAGGGTCCCTATCTCCTCAAAAGATGGCCTTGCTTACCAAAAGCCTCAATGATTTGAAGGCCAAGAAGATAACCAGACCTCAGCTGATTCAAAGAGTGAAACTCATAGTTGGTAATGAGTTGTTGGTTTCAGCAGTCAAATCTTACAGAAGCAGGCAGCAGCAACATGTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000470 GO:0003674 GO:0003676 GO:0003723 GO:0003735 GO:0005198 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005840 GO:0005844 GO:0005886 GO:0005911 GO:0006139 GO:0006364 GO:0006396 GO:0006412 GO:0006518 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009506 GO:0009987 GO:0010467 GO:0015934 GO:0016020 GO:0016070 GO:0016072 GO:0019538 GO:0022613 GO:0022625 GO:0022626 GO:0030054 GO:0032991 GO:0034470 GO:0034641 GO:0034645 GO:0034660 GO:0042254 GO:0042273 GO:0042788 GO:0043043 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043603 GO:0043604 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044391 GO:0044422 GO:0044424 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0046483 GO:0055044 GO:0071704 GO:0071840 GO:0071944 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03010 map03010

Pfam Domains

Protein Families

Ribosomal_L1

Protein Analysis

560

Amino Acids

61.72

Weight (kDa)

9.37

Isoelectric Point (pI)

46.6

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RST	PF12174	263 - 325	1.1e-07	RCD1-SRO-TAF4 (RST) plant domain
RST	PF12174	416 - 468	2.3e-08	RCD1-SRO-TAF4 (RST) plant domain
RST	PF12174	492 - 553	4.9e-17	RCD1-SRO-TAF4 (RST) plant domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001903)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G08360 AT2G27530 AT2G27530 AT5G22440 AT5G22440
fragaria_vesca	FvH4_3g24900 FvH4_3g24900 FvH4_6g18680
malus_domestica	MD03G1143900.v1.1 MD05G1199000.v1.1 MD12G1036100.v1.1 MD14G1002800.v1.1 MD14G1022900.v1.1
prunus_persica	Prupe.6G129700_v2.0.a1 Prupe.6G129700_v2.0.a1 Prupe.7G110300_v2.0.a1
pyrus_communis	pycom03g09940 pycom12g02380 pycom14g02180
rosa_chinensis	RchiOBHm_Chr3g0473651 RchiOBHm_Chr5g0044551 RchiOBHm_Chr5g0044561
rosa_laevigata	RLG00000023997 RLG00000034282 RLG00000034283
rosa_multiflora	Rmu_sc0003069.1_g000006 Rmu_sc0005978.1_g000001 Rmu_sc0006609.1_g000006
rosa_roxburghii	Rroxscaffold_1G00036410 Rroxscaffold_6G00407980
rosa_rugosa	Rorug03G0133500 Rorug03G0133600 Rorug05G0215200 Rorug05G0215300
rosa_samantha	Rh3AG185200 Rh3BG213200 Rh3CG209900 Rh3DG209000 Rh5AG299300 Rh5BG306800 Rh5CG333500 Rh5CG333600 Rh5DG316200
rosa_wichuraiana	Rw0G008910 Rw0G009840 Rw5G027700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	1078, 1216
AccB1I	GGYRCC	1 cut(s)	1465
AccBSI	CCGCTC	2 cut(s)	93, 221
AccI	GTMKAC	1 cut(s)	1147
AccII	CGCG	3 cut(s)	1104, 1236, 1256
AclWI	GGATC	4 cut(s)	173, 436, 636, 1356
AcsI	RAATTY	6 cut(s)	103, 313, 518, 633, 1355, 1471
AcuI	CTGAAG	1 cut(s)	138
AcyI	GRCGYC	1 cut(s)	21
AfaI	GTAC	3 cut(s)	422, 869, 1417
AfiI	CCNNNNNNNGG	3 cut(s)	281, 1019, 1138
AflIII	ACRYGT	1 cut(s)	1675
AgsI	TTSAA	6 cut(s)	754, 931, 1462, 1479, 1567, 1601
AjnI	CCWGG	4 cut(s)	228, 760, 1018, 1131
Alw21I	GWGCWC	2 cut(s)	831, 1243
Alw26I	GTCTC	3 cut(s)	233, 265, 1150
AlwI	GGATC	4 cut(s)	173, 436, 636, 1356
AoxI	GGCC	4 cut(s)	638, 1386, 1536, 1569
ApeKI	GCWGC	5 cut(s)	533, 782, 916, 1666, 1669
ApoI	RAATTY	6 cut(s)	103, 313, 518, 633, 1355, 1471
Asp700I	GAANNNNTTC	1 cut(s)	254
AspA2I	CCTAGG	1 cut(s)	686
AspLEI	GCGC	2 cut(s)	1104, 1258
AspS9I	GGNCC	5 cut(s)	4, 31, 272, 639, 1515
AsuC2I	CCSGG	1 cut(s)	587
AsuHPI	GGTGA	5 cut(s)	526, 691, 988, 1153, 1417
AvaII	GGWCC	4 cut(s)	4, 31, 272, 1515
AvrII	CCTAGG	1 cut(s)	686
BanI	GGYRCC	1 cut(s)	1465
BanII	GRGCYC	1 cut(s)	1243
Bbv12I	GWGCWC	2 cut(s)	831, 1243
BbvCI	CCTCAGC	3 cut(s)	1137, 1390, 1590
BbvI	GCAGC	4 cut(s)	520, 794, 903, 1678
BccI	CCATC	3 cut(s)	554, 938, 1528
BceAI	ACGGC	2 cut(s)	350, 439
BciT130I	CCWGG	4 cut(s)	230, 762, 1020, 1133
BclI	TGATCA	1 cut(s)	1305
BcnI	CCSGG	1 cut(s)	587
BcoDI	GTCTC	3 cut(s)	233, 265, 1150
BfaI	CTAG	5 cut(s)	687, 834, 984, 1263, 1440
BfmI	CTRYAG	1 cut(s)	1086
BfuAI	ACCTGC	2 cut(s)	1078, 1216
BglII	AGATCT	1 cut(s)	1453
BisI	GCNGC	6 cut(s)	391, 534, 783, 917, 1667, 1670
BlnI	CCTAGG	1 cut(s)	686
BlpI	GCTNAGC	1 cut(s)	912
BlsI	GCNGC	6 cut(s)	392, 535, 784, 918, 1668, 1671
BmcAI	AGTACT	1 cut(s)	1417
Bme1390I	CCNGG	5 cut(s)	230, 587, 762, 1020, 1133
Bme18I	GGWCC	4 cut(s)	4, 31, 272, 1515
BmgT120I	GGNCC	5 cut(s)	4, 31, 272, 639, 1515
BmiI	GGNNCC	9 cut(s)	33, 273, 274, 510, 641, 759, 1467, 1516, 1517
BmrFI	CCNGG	5 cut(s)	230, 587, 762, 1020, 1133
BmrI	ACTGGG	2 cut(s)	139, 605
BmsI	GCATC	4 cut(s)	520, 603, 928, 1488
BmuI	ACTGGG	2 cut(s)	139, 605
BplI	GAGNNNNNCTC	2 cut(s)	1596, 1628
BpmI	CTGGAG	2 cut(s)	29, 251
Bpu10I	CCTNAGC	3 cut(s)	1137, 1390, 1590
Bpu1102I	GCTNAGC	1 cut(s)	912
BpuEI	CTTGAG	1 cut(s)	45
BpuMI	CCSGG	1 cut(s)	587
Bsa29I	ATCGAT	1 cut(s)	132
BsaHI	GRCGYC	1 cut(s)	21
BsaJI	CCNNGG	2 cut(s)	686, 1234
BsaWI	WCCGGW	2 cut(s)	263, 511
BsaXI	ACNNNNNCTCC	2 cut(s)	1230, 1260
Bsc4I	CCNNNNNNNGG	3 cut(s)	281, 1019, 1138
Bse118I	RCCGGY	2 cut(s)	169, 278
Bse1I	ACTGG	2 cut(s)	145, 600
BseBI	CCWGG	4 cut(s)	230, 762, 1020, 1133
BseCI	ATCGAT	1 cut(s)	132
BseDI	CCNNGG	2 cut(s)	686, 1234
BseGI	GGATG	4 cut(s)	9, 442, 535, 570
BseLI	CCNNNNNNNGG	3 cut(s)	281, 1019, 1138
BseMII	CTCAG	8 cut(s)	438, 806, 903, 1128, 1226, 1404, 1433, 1604
BseNI	ACTGG	2 cut(s)	145, 600
BseRI	GAGGAG	5 cut(s)	777, 780, 837, 1441, 1515
BseXI	GCAGC	4 cut(s)	520, 794, 903, 1678
Bsh1236I	CGCG	3 cut(s)	1104, 1236, 1256
BshFI	GGCC	4 cut(s)	640, 1388, 1538, 1571
BshNI	GGYRCC	1 cut(s)	1465
BshVI	ATCGAT	1 cut(s)	132
BsiHKAI	GWGCWC	2 cut(s)	831, 1243
BsiSI	CCGG	5 cut(s)	170, 264, 279, 512, 586
BslFI	GGGAC	4 cut(s)	17, 285, 905, 1501
BslI	CCNNNNNNNGG	3 cut(s)	281, 1019, 1138
BsmAI	GTCTC	3 cut(s)	233, 265, 1150
BsmBI	CGTCTC	1 cut(s)	265
BsmFI	GGGAC	4 cut(s)	17, 285, 905, 1501
BsmI	GAATGC	1 cut(s)	1003
BsnI	GGCC	4 cut(s)	640, 1388, 1538, 1571
Bsp1286I	GDGCHC	2 cut(s)	831, 1243
Bsp143I	GATC	9 cut(s)	133, 178, 428, 441, 628, 814, 1305, 1348, 1453
Bsp1720I	GCTNAGC	1 cut(s)	912
BspANI	GGCC	4 cut(s)	640, 1388, 1538, 1571
BspCNI	CTCAG	8 cut(s)	439, 805, 904, 1129, 1225, 1403, 1432, 1603
BspDI	ATCGAT	1 cut(s)	132
BspFNI	CGCG	3 cut(s)	1104, 1236, 1256
BspLI	GGNNCC	9 cut(s)	33, 273, 274, 510, 641, 759, 1467, 1516, 1517
BspMI	ACCTGC	2 cut(s)	1078, 1216
BspPI	GGATC	4 cut(s)	173, 436, 636, 1356
BspQI	GCTCTTC	1 cut(s)	245
BspT107I	GGYRCC	1 cut(s)	1465
BsrBI	CCGCTC	2 cut(s)	93, 221
BsrFI	RCCGGY	2 cut(s)	169, 278
BsrI	ACTGG	2 cut(s)	145, 600
BssAI	RCCGGY	2 cut(s)	169, 278
BssECI	CCNNGG	2 cut(s)	686, 1234
BssMI	GATC	9 cut(s)	133, 178, 428, 441, 628, 814, 1305, 1348, 1453
BssNI	GRCGYC	1 cut(s)	21
BssT1I	CCWWGG	1 cut(s)	686
Bst2UI	CCWGG	4 cut(s)	230, 762, 1020, 1133
Bst4CI	ACNGT	4 cut(s)	88, 214, 1027, 1059
Bst6I	CTCTTC	3 cut(s)	115, 245, 596
BstACI	GRCGYC	1 cut(s)	21
BstC8I	GCNNGC	5 cut(s)	280, 339, 831, 1260, 1664
BstDSI	CCRYGG	1 cut(s)	1234
BstEII	GGTNACC	1 cut(s)	679
BstENI	CCTNNNNNAGG	1 cut(s)	1136
BstF5I	GGATG	4 cut(s)	9, 442, 535, 570
BstFNI	CGCG	3 cut(s)	1104, 1236, 1256
BstHHI	GCGC	2 cut(s)	1104, 1258
BstKTI	GATC	9 cut(s)	136, 181, 431, 444, 631, 817, 1308, 1351, 1456
BstMAI	GTCTC	3 cut(s)	233, 265, 1150
BstMBI	GATC	9 cut(s)	133, 178, 428, 441, 628, 814, 1305, 1348, 1453
BstMWI	GCNNNNNNNGC	3 cut(s)	530, 1013, 1091
BstNI	CCWGG	4 cut(s)	230, 762, 1020, 1133
BstNSI	RCATGY	2 cut(s)	575, 1679
BstPI	GGTNACC	1 cut(s)	679
BstSCI	CCNGG	5 cut(s)	228, 585, 760, 1018, 1131
BstSFI	CTRYAG	1 cut(s)	1086
BstUI	CGCG	3 cut(s)	1104, 1236, 1256
BstV1I	GCAGC	4 cut(s)	520, 794, 903, 1678
BstX2I	RGATCY	1 cut(s)	1453
BstXI	CCANNNNNNTGG	1 cut(s)	298
BstYI	RGATCY	1 cut(s)	1453
Bsu15I	ATCGAT	1 cut(s)	132
BsuRI	GGCC	4 cut(s)	640, 1388, 1538, 1571
BsuTUI	ATCGAT	1 cut(s)	132
BtgI	CCRYGG	1 cut(s)	1234
BtgZI	GCGATG	1 cut(s)	980
BtsCI	GGATG	4 cut(s)	9, 442, 535, 570
BtsI	GCAGTG	1 cut(s)	1434
BtsIMutI	CAGTG	2 cut(s)	195, 1434
BveI	ACCTGC	2 cut(s)	1078, 1216
Cac8I	GCNNGC	5 cut(s)	280, 339, 831, 1260, 1664
CfoI	GCGC	2 cut(s)	1104, 1258
Cfr10I	RCCGGY	2 cut(s)	169, 278
Cfr13I	GGNCC	5 cut(s)	4, 31, 272, 639, 1515
Cfr42I	CCGCGG	1 cut(s)	1237
ClaI	ATCGAT	1 cut(s)	132
CseI	GACGC	1 cut(s)	29
Csp6I	GTAC	3 cut(s)	421, 868, 1416
CviAII	CATG	5 cut(s)	461, 572, 1192, 1309, 1676
CviQI	GTAC	3 cut(s)	421, 868, 1416
DpnI	GATC	9 cut(s)	135, 180, 430, 443, 630, 816, 1307, 1350, 1455
DpnII	GATC	9 cut(s)	133, 178, 428, 441, 628, 814, 1305, 1348, 1453
Eam1104I	CTCTTC	3 cut(s)	115, 245, 596
EarI	CTCTTC	3 cut(s)	115, 245, 596
EciI	GGCGGA	3 cut(s)	297, 441, 1177
Ecl136II	GAGCTC	1 cut(s)	1241
Eco130I	CCWWGG	1 cut(s)	686
Eco24I	GRGCYC	1 cut(s)	1243
Eco47I	GGWCC	4 cut(s)	4, 31, 272, 1515
Eco53kI	GAGCTC	1 cut(s)	1241
Eco57I	CTGAAG	1 cut(s)	138
Eco91I	GGTNACC	1 cut(s)	679
EcoICRI	GAGCTC	1 cut(s)	1241
EcoNI	CCTNNNNNAGG	1 cut(s)	1136
EcoO109I	RGGNCCY	3 cut(s)	31, 272, 1515
EcoO65I	GGTNACC	1 cut(s)	679
EcoRI	GAATTC	2 cut(s)	103, 313
EcoRII	CCWGG	4 cut(s)	228, 760, 1018, 1131
EcoT14I	CCWWGG	1 cut(s)	686
EcoT38I	GRGCYC	1 cut(s)	1243
ErhI	CCWWGG	1 cut(s)	686
Esp3I	CGTCTC	1 cut(s)	265
FaeI	CATG	5 cut(s)	464, 575, 1195, 1312, 1679
FalI	AAGNNNNNCTT	2 cut(s)	1523, 1555
FaqI	GGGAC	4 cut(s)	17, 285, 905, 1501
FatI	CATG	5 cut(s)	460, 571, 1191, 1308, 1675
FauI	CCCGC	3 cut(s)	283, 330, 386
FbaI	TGATCA	1 cut(s)	1305
FblI	GTMKAC	1 cut(s)	1147
Fnu4HI	GCNGC	6 cut(s)	391, 534, 783, 917, 1667, 1670
FokI	GGATG	3 cut(s)	449, 542, 577
FriOI	GRGCYC	1 cut(s)	1243
Fsp4HI	GCNGC	6 cut(s)	391, 534, 783, 917, 1667, 1670
FspBI	CTAG	5 cut(s)	687, 834, 984, 1263, 1440
GlaI	GCGC	2 cut(s)	1103, 1257
GluI	GCNGC	6 cut(s)	391, 534, 783, 917, 1667, 1670
GsuI	CTGGAG	2 cut(s)	29, 251
HaeIII	GGCC	4 cut(s)	640, 1388, 1538, 1571
HapII	CCGG	5 cut(s)	170, 264, 279, 512, 586
HgaI	GACGC	1 cut(s)	29
HhaI	GCGC	2 cut(s)	1104, 1258
Hin1I	GRCGYC	1 cut(s)	21
Hin1II	CATG	5 cut(s)	464, 575, 1195, 1312, 1679
Hin6I	GCGC	2 cut(s)	1102, 1256
HinP1I	GCGC	2 cut(s)	1102, 1256
HincII	GTYRAC	1 cut(s)	1148
HindII	GTYRAC	1 cut(s)	1148
HpaII	CCGG	5 cut(s)	170, 264, 279, 512, 586
HphI	GGTGA	5 cut(s)	526, 691, 988, 1153, 1417
Hpy166II	GTNNAC	2 cut(s)	1148, 1229
Hpy188III	TCNNGA	6 cut(s)	13, 34, 46, 62, 137, 527
Hpy8I	GTNNAC	2 cut(s)	1148, 1229
Hpy99I	CGWCG	2 cut(s)	23, 1109
HpyAV	CCTTC	6 cut(s)	427, 943, 1287, 1456, 1505, 1561
HpyCH4III	ACNGT	4 cut(s)	88, 214, 1027, 1059
HpyCH4V	TGCA	3 cut(s)	307, 782, 919
HpyF10VI	GCNNNNNNNGC	3 cut(s)	530, 1013, 1091
Hsp92I	GRCGYC	1 cut(s)	21
Hsp92II	CATG	5 cut(s)	464, 575, 1195, 1312, 1679
HspAI	GCGC	2 cut(s)	1102, 1256
KflI	GGGWCCC	2 cut(s)	272, 1515
KroI	GCCGGC	1 cut(s)	278
KroNI	GCCGGC	1 cut(s)	280
Ksp22I	TGATCA	1 cut(s)	1305
KspI	CCGCGG	1 cut(s)	1237
Kzo9I	GATC	9 cut(s)	133, 178, 428, 441, 628, 814, 1305, 1348, 1453
LguI	GCTCTTC	1 cut(s)	245
LmnI	GCTCC	6 cut(s)	98, 232, 763, 790, 1021, 1238
Lsp1109I	GCAGC	4 cut(s)	520, 794, 903, 1678
LweI	GCATC	4 cut(s)	520, 603, 928, 1488
MaeI	CTAG	5 cut(s)	687, 834, 984, 1263, 1440
MaeIII	GTNAC	5 cut(s)	679, 976, 1065, 1405, 1430
MalI	GATC	9 cut(s)	135, 180, 430, 443, 630, 816, 1307, 1350, 1455
MbiI	CCGCTC	2 cut(s)	93, 221
MboI	GATC	9 cut(s)	133, 178, 428, 441, 628, 814, 1305, 1348, 1453
MfeI	CAATTG	2 cut(s)	503, 872
MflI	RGATCY	1 cut(s)	1453
MhlI	GDGCHC	2 cut(s)	831, 1243
MlyI	GAGTC	5 cut(s)	34, 173, 344, 1152, 1153
MmeI	TCCRAC	2 cut(s)	1326, 1488
MreI	CGCCGGCG	1 cut(s)	278
MroNI	GCCGGC	1 cut(s)	278
MroXI	GAANNNNTTC	1 cut(s)	254
MseI	TTAA	3 cut(s)	408, 1029, 1359
MspA1I	CMGCKG	2 cut(s)	1236, 1594
MspI	CCGG	5 cut(s)	170, 264, 279, 512, 586
MspR9I	CCNGG	5 cut(s)	230, 587, 762, 1020, 1133
MunI	CAATTG	2 cut(s)	503, 872
Mva1269I	GAATGC	1 cut(s)	1003
MvaI	CCWGG	4 cut(s)	230, 762, 1020, 1133
MvnI	CGCG	3 cut(s)	1104, 1236, 1256
MwoI	GCNNNNNNNGC	3 cut(s)	530, 1013, 1091
NaeI	GCCGGC	1 cut(s)	280
NciI	CCSGG	1 cut(s)	587
NdeII	GATC	9 cut(s)	133, 178, 428, 441, 628, 814, 1305, 1348, 1453
NgoMIV	GCCGGC	1 cut(s)	278
NlaIII	CATG	5 cut(s)	464, 575, 1195, 1312, 1679
NlaIV	GGNNCC	9 cut(s)	33, 273, 274, 510, 641, 759, 1467, 1516, 1517
NmuCI	GTSAC	3 cut(s)	679, 976, 1405
NspI	RCATGY	2 cut(s)	575, 1679
PciI	ACATGT	1 cut(s)	1675
PciSI	GCTCTTC	1 cut(s)	245
PctI	GAATGC	1 cut(s)	1003
PdiI	GCCGGC	1 cut(s)	280
PdmI	GAANNNNTTC	1 cut(s)	254
PfeI	GAWTC	7 cut(s)	65, 98, 140, 158, 397, 659, 1597
PfoI	TCCNGGA	1 cut(s)	1018
PkrI	GCNGC	6 cut(s)	392, 535, 784, 918, 1668, 1671
PleI	GAGTC	5 cut(s)	34, 172, 344, 1152, 1152
PpsI	GAGTC	5 cut(s)	34, 172, 344, 1152, 1152
PpuMI	RGGWCCY	3 cut(s)	31, 272, 1515
PscI	ACATGT	1 cut(s)	1675
Psp124BI	GAGCTC	1 cut(s)	1243
Psp5II	RGGWCCY	3 cut(s)	31, 272, 1515
Psp6I	CCWGG	4 cut(s)	228, 760, 1018, 1131
PspEI	GGTNACC	1 cut(s)	679
PspGI	CCWGG	4 cut(s)	228, 760, 1018, 1131
PspN4I	GGNNCC	9 cut(s)	33, 273, 274, 510, 641, 759, 1467, 1516, 1517
PspPI	GGNCC	5 cut(s)	4, 31, 272, 639, 1515
PspPPI	RGGWCCY	3 cut(s)	31, 272, 1515
PsuI	RGATCY	1 cut(s)	1453
PvuII	CAGCTG	1 cut(s)	1594
RsaI	GTAC	3 cut(s)	422, 869, 1417
RsaNI	GTAC	3 cut(s)	421, 868, 1416
SacI	GAGCTC	1 cut(s)	1243
SacII	CCGCGG	1 cut(s)	1237
SalI	GTCGAC	1 cut(s)	1146
SapI	GCTCTTC	1 cut(s)	245
SaqAI	TTAA	3 cut(s)	408, 1029, 1359
SatI	GCNGC	6 cut(s)	391, 534, 783, 917, 1667, 1670
Sau3AI	GATC	9 cut(s)	133, 178, 428, 441, 628, 814, 1305, 1348, 1453
Sau96I	GGNCC	5 cut(s)	4, 31, 272, 639, 1515
ScaI	AGTACT	1 cut(s)	1417
SchI	GAGTC	5 cut(s)	34, 173, 344, 1152, 1153
ScrFI	CCNGG	5 cut(s)	230, 587, 762, 1020, 1133
SduI	GDGCHC	2 cut(s)	831, 1243
SfaNI	GCATC	4 cut(s)	520, 603, 928, 1488
SfcI	CTRYAG	1 cut(s)	1086
Sfr303I	CCGCGG	1 cut(s)	1237
SgrAI	CRCCGGYG	1 cut(s)	278
SgrBI	CCGCGG	1 cut(s)	1237
SinI	GGWCC	4 cut(s)	4, 31, 272, 1515
SmlI	CTYRAG	1 cut(s)	60
SmoI	CTYRAG	1 cut(s)	60
SspI	AATATT	1 cut(s)	406
SspMI	CTAG	5 cut(s)	687, 834, 984, 1263, 1440
SstI	GAGCTC	1 cut(s)	1243
StyD4I	CCNGG	5 cut(s)	228, 585, 760, 1018, 1131
StyI	CCWWGG	1 cut(s)	686
TaaI	ACNGT	4 cut(s)	88, 214, 1027, 1059
TaqI	TCGA	9 cut(s)	101, 126, 132, 317, 348, 431, 647, 1147, 1351
TaqII	GACCGA	1 cut(s)	32
TatI	WGTACW	1 cut(s)	1415
TauI	GCSGC	1 cut(s)	393
TfiI	GAWTC	7 cut(s)	65, 98, 140, 158, 397, 659, 1597
Tru1I	TTAA	3 cut(s)	408, 1029, 1359
Tru9I	TTAA	3 cut(s)	408, 1029, 1359
TscAI	CASTG	2 cut(s)	202, 1441
TseFI	GTSAC	3 cut(s)	679, 976, 1405
TseI	GCWGC	5 cut(s)	533, 782, 916, 1666, 1669
Tsp45I	GTSAC	3 cut(s)	679, 976, 1405
TspDTI	ATGAA	9 cut(s)	449, 495, 570, 731, 983, 1061, 1208, 1217, 1301
TspGWI	ACGGA	2 cut(s)	171, 383
TspRI	CASTG	2 cut(s)	202, 1441
VpaK11BI	GGWCC	4 cut(s)	4, 31, 272, 1515
XagI	CCTNNNNNAGG	1 cut(s)	1136
XapI	RAATTY	6 cut(s)	103, 313, 518, 633, 1355, 1471
XceI	RCATGY	2 cut(s)	575, 1679
XmaJI	CCTAGG	1 cut(s)	686
XmiI	GTMKAC	1 cut(s)	1147
XmnI	GAANNNNTTC	1 cut(s)	254
XspI	CTAG	5 cut(s)	687, 834, 984, 1263, 1440
ZrmI	AGTACT	1 cut(s)	1417

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.