Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0001903

Physical Location & Seq

Genomic Coordinates Reverse (-)

22192847 .. 22197072

Gene Structure 4226 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0215300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1104 bp

ATGTCTCTGAGGAAATCCTTCCTCTCTCGGAAATTCTCCAAATCCTTCCGAGAATTCAACGGCAGCCAGGCCGGCGGCGGCGACCGGCGAGTCGTGCACGACTCGGCCGAGTTGGACCGGGTCTCGGATAGTGTGGAGTCGACGGCGTCGTCGTGGTCGACTTTGCTGCCGGAGCTCCTGGGCGAGATCATACAGCGAGTGGAGGACAGCGAGGACAAGTGGCCGCACCGCCAAAACGTCGTCGCCTGCGCCTGTGTCTGCAAGCGGTGGAGGGATATTACCAAGGAGATCGTGAGAACGCCTTCCGCCAATGGCAGAATTACCTTCCCTTCTTGCCTTAAGCAGCCAGGACCATCTGATTTCCCGCATCAATGTCTAATAAAACGAAACAAGAAGACCTCAACGTTTTACCTTTATCTTGCTCTTACCCCATCATTCACGGATAAGGGAAAGTTTCTGTTAGCAGCACGGAGATACAGGCGTGGGTCACACACTGAGTACATAATATCACTTGATGCTGAAGACATCTCTCAAGGAAGCAATGCCTATGTGGGAAAATTAAGCTCGGATTTTCTGGGTACGAATTTTACAATTTATGATAGTCAGCCACCACATAGTGGTGCAAAGCCTGCAAGCAGAAGGTCCAGCCGCCGTTTTGCAAGCAAGCAAATAAGCCCCCAAGTTCCAGCAGGCAACTTTGAAGTTGGACAGGTGTCTTACAGATTCAACCTTCTAAAATCTAGAGGTCCAAGGAGGATGATTTGCCCGCTAAATTGCCCAGCCTCAGGTGGAAGTGGAAACTCTGAGATGAAGAAACCAGATTATGGCAGTGGTCATAACACAGTCTTGAGGAATAAAGCTCCAAGATGGCATGATCAGTTACAGTGCTGGTGTTTGAATTTCCATGGTCGGGTCACAGTAGCATCAGTGAAGAACTTTCAGTTGGTTGTAGCATTGGATCCGAAAGGAGATGACGAAACGGTTCTCCAGTTTGGCAAAGTGGGTGATGATACATTTACCATGGATTTTAGGCACCCCTTGTCAGCTTTTCAGGCTTTTGCTATCTGCCTTACTAGCTTTGGCACGAAACTGGCGTGTGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000470 GO:0003674 GO:0003676 GO:0003723 GO:0003735 GO:0005198 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005840 GO:0005844 GO:0005886 GO:0005911 GO:0006139 GO:0006364 GO:0006396 GO:0006412 GO:0006518 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009506 GO:0009987 GO:0010467 GO:0015934 GO:0016020 GO:0016070 GO:0016072 GO:0019538 GO:0022613 GO:0022625 GO:0022626 GO:0030054 GO:0032991 GO:0034470 GO:0034641 GO:0034645 GO:0034660 GO:0042254 GO:0042273 GO:0042788 GO:0043043 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043603 GO:0043604 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044391 GO:0044422 GO:0044424 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0046483 GO:0055044 GO:0071704 GO:0071840 GO:0071944 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03010 map03010

Pfam Domains

Protein Families

Ribosomal_L1

Protein Analysis

367

Amino Acids

40.99

Weight (kDa)

9.51

Isoelectric Point (pI)

54.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Tub	PF01167	113 - 362	6.3e-94	Tub family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001903)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G08360 AT2G27530 AT2G27530 AT5G22440 AT5G22440
fragaria_vesca	FvH4_3g24900 FvH4_3g24900 FvH4_6g18680
malus_domestica	MD03G1143900.v1.1 MD05G1199000.v1.1 MD12G1036100.v1.1 MD14G1002800.v1.1 MD14G1022900.v1.1
prunus_persica	Prupe.6G129700_v2.0.a1 Prupe.6G129700_v2.0.a1 Prupe.7G110300_v2.0.a1
pyrus_communis	pycom03g09940 pycom12g02380 pycom14g02180
rosa_chinensis	RchiOBHm_Chr3g0473651 RchiOBHm_Chr5g0044551 RchiOBHm_Chr5g0044561
rosa_laevigata	RLG00000023997 RLG00000034282 RLG00000034283
rosa_multiflora	Rmu_sc0003069.1_g000006 Rmu_sc0005978.1_g000001 Rmu_sc0006609.1_g000006
rosa_roxburghii	Rroxscaffold_1G00036410 Rroxscaffold_6G00407980
rosa_rugosa	Rorug03G0133500 Rorug03G0133600 Rorug05G0215200 Rorug05G0215300
rosa_samantha	Rh3AG185200 Rh3BG213200 Rh3CG209900 Rh3DG209000 Rh5AG299300 Rh5BG306800 Rh5CG333500 Rh5CG333600 Rh5DG316200
rosa_wichuraiana	Rw0G008910 Rw0G009840 Rw5G027700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	89, 148
AccB1I	GGYRCC	1 cut(s)	1032
AccB7I	CCANNNNNTGG	2 cut(s)	617, 824
AccI	GTMKAC	2 cut(s)	140, 158
AciI	CCGC	9 cut(s)	75, 78, 224, 229, 265, 306, 365, 649, 767
AclI	AACGTT	1 cut(s)	404
AclWI	GGATC	2 cut(s)	953, 966
AcoI	YGGCCR	2 cut(s)	105, 221
AcsI	RAATTY	4 cut(s)	32, 53, 583, 898
AcuI	CTGAAG	1 cut(s)	540
AcyI	GRCGYC	1 cut(s)	146
AdeI	CACNNNGTG	1 cut(s)	617
AfaI	GTAC	2 cut(s)	500, 580
AfiI	CCNNNNNNNGG	5 cut(s)	124, 617, 785, 824, 910
AflII	CTTAAG	1 cut(s)	338
AgsI	TTSAA	4 cut(s)	58, 701, 727, 898
AjnI	CCWGG	3 cut(s)	66, 177, 346
AjuI	GAANNNNNNNTTGG	2 cut(s)	926, 958
AluBI	AGCT	5 cut(s)	175, 564, 860, 1046, 1077
AluI	AGCT	5 cut(s)	175, 564, 860, 1046, 1077
Alw21I	GWGCWC	2 cut(s)	99, 177
Alw26I	GTCTC	2 cut(s)	9, 127
Alw44I	GTGCAC	1 cut(s)	95
AlwI	GGATC	2 cut(s)	953, 966
AoxI	GGCC	3 cut(s)	69, 105, 221
ApaLI	GTGCAC	1 cut(s)	95
ApeKI	GCWGC	4 cut(s)	63, 166, 343, 464
ApoI	RAATTY	4 cut(s)	32, 53, 583, 898
Asp700I	GAANNNNTTC	3 cut(s)	17, 301, 981
AspLEI	GCGC	1 cut(s)	251
AspS9I	GGNCC	4 cut(s)	115, 350, 642, 746
AsuC2I	CCSGG	1 cut(s)	119
AsuHPI	GGTGA	1 cut(s)	1016
AvaII	GGWCC	4 cut(s)	115, 350, 642, 746
AxyI	CCTNAGG	1 cut(s)	784
BaeGI	GKGCMC	1 cut(s)	99
BaeI	ACNNNNGTAYC	2 cut(s)	466, 499
BamHI	GGATCC	1 cut(s)	958
BanI	GGYRCC	1 cut(s)	1032
BanII	GRGCYC	1 cut(s)	177
BbsI	GAAGAC	2 cut(s)	401, 528
Bbv12I	GWGCWC	2 cut(s)	99, 177
BbvI	GCAGC	4 cut(s)	75, 153, 355, 476
BccI	CCATC	3 cut(s)	361, 439, 861
BceAI	ACGGC	3 cut(s)	76, 159, 636
BcgI	CGANNNNNNTGC	2 cut(s)	148, 182
BciT130I	CCWGG	3 cut(s)	68, 179, 348
BclI	TGATCA	1 cut(s)	874
BcnI	CCSGG	1 cut(s)	119
BcoDI	GTCTC	2 cut(s)	9, 127
BfaI	CTAG	2 cut(s)	741, 1074
BfrI	CTTAAG	1 cut(s)	338
BglI	GCCNNNNNGGC	1 cut(s)	72
BisI	GCNGC	8 cut(s)	64, 76, 79, 167, 224, 344, 465, 649
BlsI	GCNGC	8 cut(s)	65, 77, 80, 168, 225, 345, 466, 650
Bme1390I	CCNGG	4 cut(s)	68, 119, 179, 348
Bme18I	GGWCC	4 cut(s)	115, 350, 642, 746
BmgT120I	GGNCC	4 cut(s)	115, 350, 642, 746
BmiI	GGNNCC	2 cut(s)	960, 1034
BmrFI	CCNGG	4 cut(s)	68, 119, 179, 348
BmsI	GCATC	3 cut(s)	376, 505, 932
BoxI	GACNNNNGTC	1 cut(s)	712
BpiI	GAAGAC	2 cut(s)	401, 528
BpmI	CTGGAG	1 cut(s)	971
BpuEI	CTTGAG	2 cut(s)	516, 868
BpuMI	CCSGG	1 cut(s)	119
BsaHI	GRCGYC	1 cut(s)	146
BsaI	GGTCTC	1 cut(s)	127
BsaJI	CCNNGG	5 cut(s)	178, 282, 749, 904, 1020
Bsc4I	CCNNNNNNNGG	5 cut(s)	124, 617, 785, 824, 910
Bse118I	RCCGGY	2 cut(s)	71, 84
Bse1I	ACTGG	2 cut(s)	988, 1095
Bse21I	CCTNAGG	1 cut(s)	784
Bse3DI	GCAATG	1 cut(s)	547
BseBI	CCWGG	3 cut(s)	68, 179, 348
BseDI	CCNNGG	5 cut(s)	178, 282, 749, 904, 1020
BseGI	GGATG	1 cut(s)	762
BseLI	CCNNNNNNNGG	5 cut(s)	124, 617, 785, 824, 910
BseMI	GCAATG	1 cut(s)	547
BseMII	CTCAG	3 cut(s)	486, 795, 798
BseNI	ACTGG	2 cut(s)	988, 1095
BseSI	GKGCMC	1 cut(s)	99
BseX3I	CGGCCG	1 cut(s)	105
BseXI	GCAGC	4 cut(s)	75, 153, 355, 476
BseYI	CCCAGC	1 cut(s)	778
Bsh1285I	CGRYCG	2 cut(s)	85, 108
BshFI	GGCC	3 cut(s)	71, 107, 223
BshNI	GGYRCC	1 cut(s)	1032
BsiEI	CGRYCG	2 cut(s)	85, 108
BsiHKAI	GWGCWC	2 cut(s)	99, 177
BsiSI	CCGG	4 cut(s)	72, 85, 118, 170
BslI	CCNNNNNNNGG	5 cut(s)	124, 617, 785, 824, 910
BsmAI	GTCTC	2 cut(s)	9, 127
BsnI	GGCC	3 cut(s)	71, 107, 223
Bso31I	GGTCTC	1 cut(s)	127
Bsp1286I	GDGCHC	2 cut(s)	99, 177
Bsp143I	GATC	4 cut(s)	186, 288, 874, 958
Bsp19I	CCATGG	2 cut(s)	904, 1020
BspACI	CCGC	9 cut(s)	75, 78, 224, 229, 265, 306, 365, 649, 767
BspANI	GGCC	3 cut(s)	71, 107, 223
BspCNI	CTCAG	3 cut(s)	487, 796, 797
BspLI	GGNNCC	2 cut(s)	960, 1034
BspPI	GGATC	2 cut(s)	953, 966
BspT107I	GGYRCC	1 cut(s)	1032
BspTI	CTTAAG	1 cut(s)	338
BspTNI	GGTCTC	1 cut(s)	127
BsrDI	GCAATG	1 cut(s)	547
BsrFI	RCCGGY	2 cut(s)	71, 84
BsrI	ACTGG	2 cut(s)	988, 1095
BssAI	RCCGGY	2 cut(s)	71, 84
BssECI	CCNNGG	5 cut(s)	178, 282, 749, 904, 1020
BssMI	GATC	4 cut(s)	186, 288, 874, 958
BssNI	GRCGYC	1 cut(s)	146
BssT1I	CCWWGG	4 cut(s)	282, 749, 904, 1020
Bst2UI	CCWGG	3 cut(s)	68, 179, 348
Bst4CI	ACNGT	4 cut(s)	844, 885, 919, 982
BstACI	GRCGYC	1 cut(s)	146
BstAFI	CTTAAG	1 cut(s)	338
BstAPI	GCANNNNNTGC	1 cut(s)	629
BstC8I	GCNNGC	9 cut(s)	73, 247, 263, 630, 634, 661, 665, 691, 767
BstDEI	CTNAG	4 cut(s)	8, 495, 784, 804
BstDSI	CCRYGG	2 cut(s)	904, 1020
BstF5I	GGATG	1 cut(s)	762
BstHHI	GCGC	1 cut(s)	251
BstKTI	GATC	4 cut(s)	189, 291, 877, 961
BstMAI	GTCTC	2 cut(s)	9, 127
BstMBI	GATC	4 cut(s)	186, 288, 874, 958
BstMCI	CGRYCG	2 cut(s)	85, 108
BstMWI	GCNNNNNNNGC	6 cut(s)	72, 94, 172, 629, 1052, 1074
BstNI	CCWGG	3 cut(s)	68, 179, 348
BstPAI	GACNNNNGTC	1 cut(s)	712
BstSCI	CCNGG	4 cut(s)	66, 117, 177, 346
BstSLI	GKGCMC	1 cut(s)	99
BstV1I	GCAGC	4 cut(s)	75, 153, 355, 476
BstV2I	GAAGAC	2 cut(s)	401, 528
BstX2I	RGATCY	1 cut(s)	958
BstYI	RGATCY	1 cut(s)	958
BstZI	CGGCCG	1 cut(s)	105
Bsu36I	CCTNAGG	1 cut(s)	784
BsuRI	GGCC	3 cut(s)	71, 107, 223
BtgI	CCRYGG	2 cut(s)	904, 1020
BtsCI	GGATG	1 cut(s)	762
BtsI	GCAGTG	1 cut(s)	835
BtsIMutI	CAGTG	4 cut(s)	492, 835, 890, 933
Cac8I	GCNNGC	9 cut(s)	73, 247, 263, 630, 634, 661, 665, 691, 767
CfoI	GCGC	1 cut(s)	251
Cfr10I	RCCGGY	2 cut(s)	71, 84
Cfr13I	GGNCC	4 cut(s)	115, 350, 642, 746
CseI	GACGC	1 cut(s)	135
Csp6I	GTAC	2 cut(s)	499, 579
CviAII	CATG	3 cut(s)	872, 905, 1021
CviQI	GTAC	2 cut(s)	499, 579
DdeI	CTNAG	4 cut(s)	8, 495, 784, 804
DpnI	GATC	4 cut(s)	188, 290, 876, 960
DpnII	GATC	4 cut(s)	186, 288, 874, 958
DraIII	CACNNNGTG	1 cut(s)	617
DrdI	GACNNNNNNGTC	2 cut(s)	89, 148
DseDI	GACNNNNNNGTC	2 cut(s)	89, 148
EaeI	YGGCCR	2 cut(s)	105, 221
EagI	CGGCCG	1 cut(s)	105
EciI	GGCGGA	1 cut(s)	295
Ecl136II	GAGCTC	1 cut(s)	175
EclXI	CGGCCG	1 cut(s)	105
Eco130I	CCWWGG	4 cut(s)	282, 749, 904, 1020
Eco24I	GRGCYC	1 cut(s)	177
Eco31I	GGTCTC	1 cut(s)	127
Eco47I	GGWCC	4 cut(s)	115, 350, 642, 746
Eco52I	CGGCCG	1 cut(s)	105
Eco53kI	GAGCTC	1 cut(s)	175
Eco57I	CTGAAG	1 cut(s)	540
Eco81I	CCTNAGG	1 cut(s)	784
EcoICRI	GAGCTC	1 cut(s)	175
EcoRI	GAATTC	1 cut(s)	53
EcoRII	CCWGG	3 cut(s)	66, 177, 346
EcoT14I	CCWWGG	4 cut(s)	282, 749, 904, 1020
EcoT38I	GRGCYC	1 cut(s)	177
ErhI	CCWWGG	4 cut(s)	282, 749, 904, 1020
FaeI	CATG	3 cut(s)	875, 908, 1024
FatI	CATG	3 cut(s)	871, 904, 1020
FauI	CCCGC	2 cut(s)	372, 774
FbaI	TGATCA	1 cut(s)	874
FblI	GTMKAC	2 cut(s)	140, 158
Fnu4HI	GCNGC	8 cut(s)	64, 76, 79, 167, 224, 344, 465, 649
FokI	GGATG	1 cut(s)	769
FriOI	GRGCYC	1 cut(s)	177
Fsp4HI	GCNGC	8 cut(s)	64, 76, 79, 167, 224, 344, 465, 649
FspBI	CTAG	2 cut(s)	741, 1074
GlaI	GCGC	1 cut(s)	250
GluI	GCNGC	8 cut(s)	64, 76, 79, 167, 224, 344, 465, 649
GsaI	CCCAGC	1 cut(s)	782
GsuI	CTGGAG	1 cut(s)	971
HaeIII	GGCC	3 cut(s)	71, 107, 223
HapII	CCGG	4 cut(s)	72, 85, 118, 170
HgaI	GACGC	1 cut(s)	135
HhaI	GCGC	1 cut(s)	251
Hin1I	GRCGYC	1 cut(s)	146
Hin1II	CATG	3 cut(s)	875, 908, 1024
Hin6I	GCGC	1 cut(s)	249
HinP1I	GCGC	1 cut(s)	249
HincII	GTYRAC	2 cut(s)	141, 159
HindII	GTYRAC	2 cut(s)	141, 159
HinfI	GANTC	4 cut(s)	90, 101, 137, 723
HpaII	CCGG	4 cut(s)	72, 85, 118, 170
HphI	GGTGA	1 cut(s)	1016
Hpy166II	GTNNAC	3 cut(s)	97, 141, 159
Hpy188I	TCNGA	8 cut(s)	9, 30, 50, 127, 358, 568, 805, 963
Hpy188III	TCNNGA	3 cut(s)	292, 741, 847
Hpy8I	GTNNAC	3 cut(s)	97, 141, 159
Hpy99I	CGWCG	5 cut(s)	145, 151, 154, 242, 245
HpyAV	CCTTC	7 cut(s)	28, 55, 312, 334, 339, 633, 740
HpyCH4III	ACNGT	4 cut(s)	844, 885, 919, 982
HpyCH4IV	ACGT	2 cut(s)	237, 404
HpyCH4V	TGCA	5 cut(s)	97, 261, 623, 632, 659
HpyF10VI	GCNNNNNNNGC	6 cut(s)	72, 94, 172, 629, 1052, 1074
HpyF3I	CTNAG	4 cut(s)	8, 495, 784, 804
HpySE526I	ACGT	2 cut(s)	237, 404
Hsp92I	GRCGYC	1 cut(s)	146
Hsp92II	CATG	3 cut(s)	875, 908, 1024
HspAI	GCGC	1 cut(s)	249
KroI	GCCGGC	1 cut(s)	71
KroNI	GCCGGC	1 cut(s)	73
Ksp22I	TGATCA	1 cut(s)	874
Kzo9I	GATC	4 cut(s)	186, 288, 874, 958
LmnI	GCTCC	3 cut(s)	172, 180, 865
Lsp1109I	GCAGC	4 cut(s)	75, 153, 355, 476
LweI	GCATC	3 cut(s)	376, 505, 932
MaeI	CTAG	2 cut(s)	741, 1074
MaeII	ACGT	2 cut(s)	237, 404
MaeIII	GTNAC	3 cut(s)	486, 879, 913
MalI	GATC	4 cut(s)	188, 290, 876, 960
MboI	GATC	4 cut(s)	186, 288, 874, 958
MboII	GAAGA	4 cut(s)	406, 533, 823, 943
MflI	RGATCY	1 cut(s)	958
MhlI	GDGCHC	2 cut(s)	99, 177
MluCI	AATT	8 cut(s)	32, 53, 318, 557, 583, 591, 772, 898
MlyI	GAGTC	3 cut(s)	95, 99, 146
MmeI	TCCRAC	2 cut(s)	93, 685
MroNI	GCCGGC	1 cut(s)	71
MroXI	GAANNNNTTC	3 cut(s)	17, 301, 981
MseI	TTAA	2 cut(s)	339, 560
MslI	CAYNNNNRTG	1 cut(s)	618
MspCI	CTTAAG	1 cut(s)	338
MspI	CCGG	4 cut(s)	72, 85, 118, 170
MspR9I	CCNGG	4 cut(s)	68, 119, 179, 348
MvaI	CCWGG	3 cut(s)	68, 179, 348
MwoI	GCNNNNNNNGC	6 cut(s)	72, 94, 172, 629, 1052, 1074
NaeI	GCCGGC	1 cut(s)	73
NciI	CCSGG	1 cut(s)	119
NcoI	CCATGG	2 cut(s)	904, 1020
NdeII	GATC	4 cut(s)	186, 288, 874, 958
NgoMIV	GCCGGC	1 cut(s)	71
NlaIII	CATG	3 cut(s)	875, 908, 1024
NlaIV	GGNNCC	2 cut(s)	960, 1034
NmeAIII	GCCGAG	2 cut(s)	83, 133
NmuCI	GTSAC	2 cut(s)	486, 913
PcsI	WCGNNNNNNNCGW	5 cut(s)	105, 146, 149, 155, 1091
PdiI	GCCGGC	1 cut(s)	73
PdmI	GAANNNNTTC	3 cut(s)	17, 301, 981
PfeI	GAWTC	1 cut(s)	723
PflFI	GACNNNGTC	2 cut(s)	119, 145
PflMI	CCANNNNNTGG	2 cut(s)	617, 824
PkrI	GCNGC	8 cut(s)	65, 77, 80, 168, 225, 345, 466, 650
PleI	GAGTC	3 cut(s)	95, 98, 145
PpsI	GAGTC	3 cut(s)	95, 98, 145
PshAI	GACNNNNGTC	1 cut(s)	712
Psp124BI	GAGCTC	1 cut(s)	177
Psp1406I	AACGTT	1 cut(s)	404
Psp6I	CCWGG	3 cut(s)	66, 177, 346
PspFI	CCCAGC	1 cut(s)	778
PspGI	CCWGG	3 cut(s)	66, 177, 346
PspN4I	GGNNCC	2 cut(s)	960, 1034
PspPI	GGNCC	4 cut(s)	115, 350, 642, 746
PsuI	RGATCY	1 cut(s)	958
PsyI	GACNNNGTC	2 cut(s)	119, 145
RsaI	GTAC	2 cut(s)	500, 580
RsaNI	GTAC	2 cut(s)	499, 579
RseI	CAYNNNNRTG	1 cut(s)	618
SacI	GAGCTC	1 cut(s)	177
SalI	GTCGAC	2 cut(s)	139, 157
SaqAI	TTAA	2 cut(s)	339, 560
SatI	GCNGC	8 cut(s)	64, 76, 79, 167, 224, 344, 465, 649
Sau3AI	GATC	4 cut(s)	186, 288, 874, 958
Sau96I	GGNCC	4 cut(s)	115, 350, 642, 746
SchI	GAGTC	3 cut(s)	95, 99, 146
ScrFI	CCNGG	4 cut(s)	68, 119, 179, 348
SduI	GDGCHC	2 cut(s)	99, 177
SfaNI	GCATC	3 cut(s)	376, 505, 932
SinI	GGWCC	4 cut(s)	115, 350, 642, 746
SmiMI	CAYNNNNRTG	1 cut(s)	618
SmlI	CTYRAG	3 cut(s)	338, 531, 847
SmoI	CTYRAG	3 cut(s)	338, 531, 847
Sse9I	AATT	8 cut(s)	32, 53, 318, 557, 583, 591, 772, 898
SsiI	CCGC	9 cut(s)	75, 78, 224, 229, 265, 306, 365, 649, 767
SspMI	CTAG	2 cut(s)	741, 1074
SstI	GAGCTC	1 cut(s)	177
StyD4I	CCNGG	4 cut(s)	66, 117, 177, 346
StyI	CCWWGG	4 cut(s)	282, 749, 904, 1020
TaaI	ACNGT	4 cut(s)	844, 885, 919, 982
TaiI	ACGT	2 cut(s)	240, 407
TaqI	TCGA	2 cut(s)	140, 158
TasI	AATT	8 cut(s)	32, 53, 318, 557, 583, 591, 772, 898
TatI	WGTACW	1 cut(s)	498
TauI	GCSGC	4 cut(s)	78, 81, 226, 651
TfiI	GAWTC	1 cut(s)	723
Tru1I	TTAA	2 cut(s)	339, 560
Tru9I	TTAA	2 cut(s)	339, 560
TscAI	CASTG	4 cut(s)	499, 835, 890, 933
TseFI	GTSAC	2 cut(s)	486, 913
TseI	GCWGC	4 cut(s)	63, 166, 343, 464
Tsp45I	GTSAC	2 cut(s)	486, 913
TspDTI	ATGAA	1 cut(s)	824
TspGWI	ACGGA	2 cut(s)	455, 484
TspRI	CASTG	4 cut(s)	499, 835, 890, 933
Tth111I	GACNNNGTC	2 cut(s)	119, 145
Van91I	CCANNNNNTGG	2 cut(s)	617, 824
Vha464I	CTTAAG	1 cut(s)	338
VneI	GTGCAC	1 cut(s)	95
VpaK11BI	GGWCC	4 cut(s)	115, 350, 642, 746
XapI	RAATTY	4 cut(s)	32, 53, 583, 898
XbaI	TCTAGA	1 cut(s)	740
XmiI	GTMKAC	2 cut(s)	140, 158
XmnI	GAANNNNTTC	3 cut(s)	17, 301, 981
XspI	CTAG	2 cut(s)	741, 1074

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.