Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0003022

Physical Location & Seq

Genomic Coordinates Reverse (-)

16472721 .. 16475121

Gene Structure 2401 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0120200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1512 bp

ATGGCTATAACCACCTTTCCAACCATCGACAAATGCTCATCGAACGGGCGAGAAAACCATACGGTGGTTGCGGACATGGACGGGACCTTGCTAAGAGGTCGCATCTCTTTTCCTTACTTTGCTCTCATTGCTTTTGAGGTCGGTGGGATTTTAAGGCTCCTGTTCTTGCTCTTGGTCTCCCCATTAGCTGGACTCCTCTATTACTTCGTATCTGAATCGGCTGGAATCCAAGTTCAGATCTTCGCAACATTTGCCGGTGTGAGGGTGTCTGAGATCGAGTCGGTGGCGCGTGCCGTGCTGCCTAAGTTTTACTCGACTGACATTCACCCAGAGTCGTGGCGCGTGCTCTCTGCCTGCGAGAAGCGGTGTATTCTTACTGCCAACCCTAGGATTATGGTGGAAGCGTTTTGTAAGGATTTCCTTGGATTTGATACGGTTTTGGGCACTGAAATTGCAACCTACAAAGGTAAAGCCACTGGCTTTGTTTCTCCACCTGGTGTGCTTGTCGCAGAGAAGAAGGCTGATGCTCTTAAGAAGGCTTTTGGAGATGTACAGCCAGAGATTGGGCTTGGCGATAGGCACACTGATATTCCTTTCATGGCACTTTGCAAGGAGGGTTATATGGTTCCGCCCAACCCTAAAGTAGAAGCAGTGACCAGAGATAAGCTCCCTAAGCCCATAGTCTTCCACGACGGCCGCCTAGTCCAAAAGCCAACACCTCTAATGGCCCTCCTCACCATCCTCTGGCTCCCCATCGGCTTCTTCCTTGCCTGCCTTCGAATCGCCGTTGGCTTCCTCCTCCCCATGCCAGTCGTTTACTACGCCCTCTGGGCCCTCGGTGTTCGTGTCACCGTTAAGGGCTCCCCACCCCCTCCAGCCAAAAAATCCACCGGCCAGTCTGGCGTCCTCTTCATCTGCTCCCACCACACCCTCCTCGACCCCGTCTTCCTCTCCATCGCCCTCGGTCGCCCCATCCCCACCGTCACCTACTCCGTCTCTCGCCTCACAGAGTTCCTCTCCCCCATCAAGACCGTCCGCCTCAACCGCGACCGCGCCAAAGACGCTGCCATGATCAAGAAGCTACTAGATGAAGGTGACCTTGCAATCTGCCCCGAGGGGACCACCTGCCGGGAGCCATTTCTGTTGAGGGTCTCAGCGCTTTTTGCTGAGCTAACCGATGAGCTCGTTCCGGTGGCCATGGTGAACAAGATGAGCATGTTCCAGGGCACGACGGCGCGTGGGTGGAAGGGGATGGACCCTTTTTACTTCTTCCTGAACCCTCGCCCAGAATACGAGGTTACATTTTTAAACAAGCTGCCGGCGGAGTTGACTTGCGGGGCAGGCAAGTCGAGCCATGAGGTGGCGAATTATATACAGAGGGCTATGGCGGCCAGCCTTTCGTATGATATCACCAGTTTTATGAGGAAAGACAAGTATAGGGCTCTGGCTGGGAACGATGGCTCTGTGGTTGAGAAACCTGTGCTGCAACCGAACAAAGTCATGGGGTGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SecE

Protein Analysis

503

Amino Acids

55.29

Weight (kDa)

8.96

Isoelectric Point (pI)

40.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HAD_RAM2_N	PF23270	21 - 209	2.1e-59	Glycerol-3-phosphate acyltransferase RAM2-like, HAD-like domain
HAD	PF12710	22 - 200	1.2e-23	haloacid dehalogenase-like hydrolase
Acyltransferase	PF01553	293 - 391	8.8e-06	Acyltransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003022)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G38490
fragaria_vesca	FvH4_2g15660 FvH4_2g15660 FvH4_2g15660 FvH4_2g15660 FvH4_2g15660 FvH4_2g15660 FvH4_2g15660 FvH4_2g15660 FvH4_2g15660
malus_domestica	MD10G1127900.v1.1 MD10G1128000.v1.1
prunus_persica	Prupe.8G169100_v2.0.a1 Prupe.8G169100_v2.0.a1 Prupe.8G169100_v2.0.a1 Prupe.8G169100_v2.0.a1
pyrus_communis	pycom10g10960
rosa_chinensis	RchiOBHm_Chr6g0278901 RchiOBHm_Chr6g0278921 RchiOBHm_Chr6g0278961
rosa_multiflora	Rmu_sc0000309.1_g000056 Rmu_sc0009618.1_g000001 Rmu_sc0009618.1_g000014
rosa_roxburghii	Rroxscaffold_7G00189310 Rroxscaffold_7G00189390 Rroxscaffold_7G00189530
rosa_rugosa	Rorug06G0120200 Rorug06G0120400 Rorug06G0120500 Rorug06G0120500
rosa_samantha	Rh6AG229100 Rh6BG234300 Rh6CG236500 Rh6DG227800 Rh6DG228100
rosa_wichuraiana	Rw6G020050 Rw6G020060 Rw6G020170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1133
Acc36I	ACCTGC	1 cut(s)	1133
AccB7I	CCANNNNNTGG	5 cut(s)	64, 188, 563, 744, 1360
AccII	CGCG	5 cut(s)	289, 342, 1047, 1053, 1237
AcoI	YGGCCR	4 cut(s)	694, 892, 1194, 1389
AcyI	GRCGYC	1 cut(s)	903
AdeI	CACNNNGTG	1 cut(s)	497
AfaI	GTAC	1 cut(s)	552
AfeI	AGCGCT	1 cut(s)	1158
AfiI	CCNNNNNNNGG	8 cut(s)	64, 188, 261, 387, 563, 744, 1128, 1360
AflII	CTTAAG	1 cut(s)	530
AjnI	CCWGG	2 cut(s)	493, 1221
AloI	GAACNNNNNNTCC	2 cut(s)	216, 248
AluBI	AGCT	6 cut(s)	188, 667, 1081, 1171, 1183, 1315
AluI	AGCT	6 cut(s)	188, 667, 1081, 1171, 1183, 1315
Alw21I	GWGCWC	2 cut(s)	348, 1185
Alw26I	GTCTC	3 cut(s)	181, 1000, 1156
Ama87I	CYCGRG	1 cut(s)	1112
Aor51HI	AGCGCT	1 cut(s)	1158
AoxI	GGCC	6 cut(s)	694, 726, 831, 892, 1194, 1389
ApaI	GGGCCC	1 cut(s)	835
ApeKI	GCWGC	4 cut(s)	298, 1064, 1315, 1483
AspA2I	CCTAGG	1 cut(s)	386
AspLEI	GCGC	5 cut(s)	289, 342, 1055, 1159, 1237
AspS9I	GGNCC	6 cut(s)	84, 727, 831, 832, 1119, 1255
AsuC2I	CCSGG	1 cut(s)	1130
AsuHPI	GGTGA	7 cut(s)	317, 727, 841, 976, 1106, 1213, 1402
AsuII	TTCGAA	1 cut(s)	778
AvaI	CYCGRG	1 cut(s)	1112
AvaII	GGWCC	3 cut(s)	84, 1119, 1255
AvrII	CCTAGG	1 cut(s)	386
BaeGI	GKGCMC	3 cut(s)	446, 835, 1229
BalI	TGGCCA	1 cut(s)	1196
BanII	GRGCYC	4 cut(s)	835, 863, 1185, 1444
BbsI	GAAGAC	2 cut(s)	676, 937
Bbv12I	GWGCWC	2 cut(s)	348, 1185
BbvI	GCAGC	4 cut(s)	285, 1051, 1302, 1470
BccI	CCATC	8 cut(s)	32, 746, 761, 962, 980, 1031, 1246, 1451
BceAI	ACGGC	4 cut(s)	278, 709, 770, 1248
BcgI	CGANNNNNNTGC	2 cut(s)	1329, 1363
BciT130I	CCWGG	2 cut(s)	495, 1223
BclI	TGATCA	1 cut(s)	1071
BcnI	CCSGG	1 cut(s)	1130
BcoDI	GTCTC	3 cut(s)	181, 1000, 1156
BfaI	CTAG	3 cut(s)	387, 701, 1085
BfoI	RGCGCY	1 cut(s)	1160
BfrI	CTTAAG	1 cut(s)	530
BfuAI	ACCTGC	1 cut(s)	1133
BglI	GCCNNNNNGGC	2 cut(s)	830, 900
BglII	AGATCT	1 cut(s)	237
BisI	GCNGC	6 cut(s)	299, 697, 1065, 1316, 1389, 1484
BlnI	CCTAGG	1 cut(s)	386
BlpI	GCTNAGC	1 cut(s)	1167
BlsI	GCNGC	6 cut(s)	300, 698, 1066, 1317, 1390, 1485
Bme1390I	CCNGG	3 cut(s)	495, 1130, 1223
Bme18I	GGWCC	3 cut(s)	84, 1119, 1255
BmeT110I	CYCGRG	1 cut(s)	1112
BmgT120I	GGNCC	6 cut(s)	84, 727, 831, 832, 1119, 1255
BmiI	GGNNCC	9 cut(s)	85, 158, 627, 749, 833, 862, 1120, 1134, 1257
BmrFI	CCNGG	3 cut(s)	495, 1130, 1223
BmsI	GCATC	2 cut(s)	111, 514
BpiI	GAAGAC	2 cut(s)	676, 937
BplI	GAGNNNNNCTC	4 cut(s)	651, 683, 1001, 1033
BpmI	CTGGAG	1 cut(s)	858
Bpu10I	CCTNAGC	1 cut(s)	672
Bpu1102I	GCTNAGC	1 cut(s)	1167
Bpu14I	TTCGAA	1 cut(s)	778
BpuMI	CCSGG	1 cut(s)	1130
BsaHI	GRCGYC	1 cut(s)	903
BsaI	GGTCTC	2 cut(s)	181, 1156
BsaJI	CCNNGG	7 cut(s)	386, 421, 835, 961, 1113, 1197, 1222
BsaWI	WCCGGW	1 cut(s)	1189
Bsc4I	CCNNNNNNNGG	8 cut(s)	64, 188, 261, 387, 563, 744, 1128, 1360
Bse118I	RCCGGY	3 cut(s)	254, 890, 1318
Bse1I	ACTGG	4 cut(s)	481, 809, 895, 1413
Bse3DI	GCAATG	1 cut(s)	126
BseBI	CCWGG	2 cut(s)	495, 1223
BseDI	CCNNGG	7 cut(s)	386, 421, 835, 961, 1113, 1197, 1222
BseGI	GGATG	3 cut(s)	738, 972, 1257
BseLI	CCNNNNNNNGG	8 cut(s)	64, 188, 261, 387, 563, 744, 1128, 1360
BseMI	GCAATG	1 cut(s)	126
BseMII	CTCAG	3 cut(s)	261, 1158, 1167
BseNI	ACTGG	4 cut(s)	481, 809, 895, 1413
BseRI	GAGGAG	4 cut(s)	185, 722, 788, 923
BseSI	GKGCMC	3 cut(s)	446, 835, 1229
BseX3I	CGGCCG	1 cut(s)	694
BseXI	GCAGC	4 cut(s)	285, 1051, 1302, 1470
BseYI	CCCAGC	1 cut(s)	1448
Bsh1236I	CGCG	5 cut(s)	289, 342, 1047, 1053, 1237
Bsh1285I	CGRYCG	3 cut(s)	697, 967, 1051
BshFI	GGCC	6 cut(s)	696, 728, 833, 894, 1196, 1391
BsiEI	CGRYCG	3 cut(s)	697, 967, 1051
BsiHKAI	GWGCWC	2 cut(s)	348, 1185
BsiHKCI	CYCGRG	1 cut(s)	1112
BsiSI	CCGG	5 cut(s)	255, 891, 1129, 1190, 1319
BslFI	GGGAC	2 cut(s)	97, 1132
BslI	CCNNNNNNNGG	8 cut(s)	64, 188, 261, 387, 563, 744, 1128, 1360
BsmAI	GTCTC	3 cut(s)	181, 1000, 1156
BsmBI	CGTCTC	1 cut(s)	1000
BsmFI	GGGAC	2 cut(s)	97, 1132
BsnI	GGCC	6 cut(s)	696, 728, 833, 894, 1196, 1391
Bso31I	GGTCTC	2 cut(s)	181, 1156
BsoBI	CYCGRG	1 cut(s)	1112
Bsp119I	TTCGAA	1 cut(s)	778
Bsp120I	GGGCCC	1 cut(s)	831
Bsp1286I	GDGCHC	7 cut(s)	348, 446, 835, 863, 1185, 1229, 1444
Bsp1407I	TGTACA	1 cut(s)	550
Bsp143I	GATC	3 cut(s)	237, 273, 1071
Bsp1720I	GCTNAGC	1 cut(s)	1167
Bsp19I	CCATGG	1 cut(s)	1197
BspANI	GGCC	6 cut(s)	696, 728, 833, 894, 1196, 1391
BspCNI	CTCAG	3 cut(s)	262, 1159, 1166
BspFNI	CGCG	5 cut(s)	289, 342, 1047, 1053, 1237
BspLI	GGNNCC	9 cut(s)	85, 158, 627, 749, 833, 862, 1120, 1134, 1257
BspMI	ACCTGC	1 cut(s)	1133
BspT104I	TTCGAA	1 cut(s)	778
BspTI	CTTAAG	1 cut(s)	530
BspTNI	GGTCTC	2 cut(s)	181, 1156
BsrDI	GCAATG	1 cut(s)	126
BsrFI	RCCGGY	3 cut(s)	254, 890, 1318
BsrGI	TGTACA	1 cut(s)	550
BsrI	ACTGG	4 cut(s)	481, 809, 895, 1413
BssAI	RCCGGY	3 cut(s)	254, 890, 1318
BssECI	CCNNGG	7 cut(s)	386, 421, 835, 961, 1113, 1197, 1222
BssMI	GATC	3 cut(s)	237, 273, 1071
BssNI	GRCGYC	1 cut(s)	903
BssT1I	CCWWGG	3 cut(s)	386, 421, 1197
Bst2UI	CCWGG	2 cut(s)	495, 1223
Bst4CI	ACNGT	5 cut(s)	64, 436, 853, 982, 1033
Bst6I	CTCTTC	1 cut(s)	914
BstACI	GRCGYC	1 cut(s)	903
BstAFI	CTTAAG	1 cut(s)	530
BstAPI	GCANNNNNTGC	1 cut(s)	251
BstAUI	TGTACA	1 cut(s)	550
BstBI	TTCGAA	1 cut(s)	778
BstC8I	GCNNGC	7 cut(s)	291, 344, 355, 772, 1320, 1342, 1393
BstDEI	CTNAG	6 cut(s)	92, 270, 303, 672, 1153, 1167
BstDSI	CCRYGG	1 cut(s)	1197
BstEII	GGTNACC	1 cut(s)	1094
BstF5I	GGATG	3 cut(s)	738, 972, 1257
BstFNI	CGCG	5 cut(s)	289, 342, 1047, 1053, 1237
BstH2I	RGCGCY	1 cut(s)	1160
BstHHI	GCGC	5 cut(s)	289, 342, 1055, 1159, 1237
BstKTI	GATC	3 cut(s)	240, 276, 1074
BstMAI	GTCTC	3 cut(s)	181, 1000, 1156
BstMBI	GATC	3 cut(s)	237, 273, 1071
BstMCI	CGRYCG	3 cut(s)	697, 967, 1051
BstNI	CCWGG	2 cut(s)	495, 1223
BstNSI	RCATGY	1 cut(s)	1219
BstPI	GGTNACC	1 cut(s)	1094
BstSCI	CCNGG	3 cut(s)	493, 1128, 1221
BstSLI	GKGCMC	3 cut(s)	446, 835, 1229
BstUI	CGCG	5 cut(s)	289, 342, 1047, 1053, 1237
BstV1I	GCAGC	4 cut(s)	285, 1051, 1302, 1470
BstV2I	GAAGAC	2 cut(s)	676, 937
BstX2I	RGATCY	1 cut(s)	237
BstXI	CCANNNNNNTGG	1 cut(s)	336
BstYI	RGATCY	1 cut(s)	237
BstZI	CGGCCG	1 cut(s)	694
BsuRI	GGCC	6 cut(s)	696, 728, 833, 894, 1196, 1391
BtgI	CCRYGG	1 cut(s)	1197
BtgZI	GCGATG	1 cut(s)	940
BtsCI	GGATG	3 cut(s)	738, 972, 1257
BtsI	GCAGTG	1 cut(s)	657
BtsIMutI	CAGTG	4 cut(s)	444, 474, 582, 657
BveI	ACCTGC	1 cut(s)	1133
Cac8I	GCNNGC	7 cut(s)	291, 344, 355, 772, 1320, 1342, 1393
CfoI	GCGC	5 cut(s)	289, 342, 1055, 1159, 1237
Cfr10I	RCCGGY	3 cut(s)	254, 890, 1318
Cfr13I	GGNCC	6 cut(s)	84, 727, 831, 832, 1119, 1255
CseI	GACGC	2 cut(s)	892, 1070
CsiI	ACCWGGT	1 cut(s)	493
Csp6I	GTAC	1 cut(s)	551
CspCI	CAANNNNNGTGG	2 cut(s)	463, 498
CviAII	CATG	8 cut(s)	76, 598, 805, 1069, 1198, 1216, 1355, 1501
CviQI	GTAC	1 cut(s)	551
DdeI	CTNAG	6 cut(s)	92, 270, 303, 672, 1153, 1167
DpnI	GATC	3 cut(s)	239, 275, 1073
DpnII	GATC	3 cut(s)	237, 273, 1071
DraI	TTTAAA	1 cut(s)	1308
DraIII	CACNNNGTG	1 cut(s)	497
EaeI	YGGCCR	4 cut(s)	694, 892, 1194, 1389
EagI	CGGCCG	1 cut(s)	694
Eam1104I	CTCTTC	1 cut(s)	914
EarI	CTCTTC	1 cut(s)	914
EciI	GGCGGA	3 cut(s)	618, 1025, 1337
Ecl136II	GAGCTC	1 cut(s)	1183
EclXI	CGGCCG	1 cut(s)	694
Eco130I	CCWWGG	3 cut(s)	386, 421, 1197
Eco24I	GRGCYC	4 cut(s)	835, 863, 1185, 1444
Eco31I	GGTCTC	2 cut(s)	181, 1156
Eco32I	GATATC	1 cut(s)	1408
Eco47I	GGWCC	3 cut(s)	84, 1119, 1255
Eco47III	AGCGCT	1 cut(s)	1158
Eco52I	CGGCCG	1 cut(s)	694
Eco53kI	GAGCTC	1 cut(s)	1183
Eco88I	CYCGRG	1 cut(s)	1112
Eco91I	GGTNACC	1 cut(s)	1094
EcoICRI	GAGCTC	1 cut(s)	1183
EcoO109I	RGGNCCY	2 cut(s)	84, 832
EcoO65I	GGTNACC	1 cut(s)	1094
EcoRII	CCWGG	2 cut(s)	493, 1221
EcoRV	GATATC	1 cut(s)	1408
EcoT14I	CCWWGG	3 cut(s)	386, 421, 1197
EcoT38I	GRGCYC	4 cut(s)	835, 863, 1185, 1444
ErhI	CCWWGG	3 cut(s)	386, 421, 1197
Esp3I	CGTCTC	1 cut(s)	1000
FaeI	CATG	8 cut(s)	79, 601, 808, 1072, 1201, 1219, 1358, 1504
FalI	AAGNNNNNCTT	2 cut(s)	1083, 1115
FaqI	GGGAC	2 cut(s)	97, 1132
FatI	CATG	8 cut(s)	75, 597, 804, 1068, 1197, 1215, 1354, 1500
FauI	CCCGC	1 cut(s)	1328
FbaI	TGATCA	1 cut(s)	1071
Fnu4HI	GCNGC	6 cut(s)	299, 697, 1065, 1316, 1389, 1484
FokI	GGATG	3 cut(s)	725, 959, 1264
FriOI	GRGCYC	4 cut(s)	835, 863, 1185, 1444
Fsp4HI	GCNGC	6 cut(s)	299, 697, 1065, 1316, 1389, 1484
FspBI	CTAG	3 cut(s)	387, 701, 1085
GlaI	GCGC	5 cut(s)	288, 341, 1054, 1158, 1236
GluI	GCNGC	6 cut(s)	299, 697, 1065, 1316, 1389, 1484
GsaI	CCCAGC	1 cut(s)	1452
GsuI	CTGGAG	1 cut(s)	858
HaeII	RGCGCY	1 cut(s)	1160
HaeIII	GGCC	6 cut(s)	696, 728, 833, 894, 1196, 1391
HapII	CCGG	5 cut(s)	255, 891, 1129, 1190, 1319
HgaI	GACGC	2 cut(s)	892, 1070
HhaI	GCGC	5 cut(s)	289, 342, 1055, 1159, 1237
Hin1I	GRCGYC	1 cut(s)	903
Hin1II	CATG	8 cut(s)	79, 601, 808, 1072, 1201, 1219, 1358, 1504
Hin6I	GCGC	5 cut(s)	287, 340, 1053, 1157, 1235
HinP1I	GCGC	5 cut(s)	287, 340, 1053, 1157, 1235
HincII	GTYRAC	1 cut(s)	1329
HindII	GTYRAC	1 cut(s)	1329
HinfI	GANTC	6 cut(s)	192, 215, 225, 278, 332, 780
HpaII	CCGG	5 cut(s)	255, 891, 1129, 1190, 1319
HphI	GGTGA	7 cut(s)	317, 727, 841, 976, 1106, 1213, 1402
Hpy166II	GTNNAC	3 cut(s)	817, 1204, 1329
Hpy188I	TCNGA	3 cut(s)	214, 237, 271
Hpy188III	TCNNGA	3 cut(s)	1027, 1075, 1273
Hpy8I	GTNNAC	3 cut(s)	817, 1204, 1329
Hpy99I	CGWCG	2 cut(s)	695, 1234
HpyAV	CCTTC	5 cut(s)	511, 529, 785, 1085, 1240
HpyCH4III	ACNGT	5 cut(s)	64, 436, 853, 982, 1033
HpyCH4V	TGCA	4 cut(s)	455, 609, 1103, 1486
HpyF3I	CTNAG	6 cut(s)	92, 270, 303, 672, 1153, 1167
Hsp92I	GRCGYC	1 cut(s)	903
Hsp92II	CATG	8 cut(s)	79, 601, 808, 1072, 1201, 1219, 1358, 1504
HspAI	GCGC	5 cut(s)	287, 340, 1053, 1157, 1235
KroI	GCCGGC	1 cut(s)	1318
KroNI	GCCGGC	1 cut(s)	1320
Ksp22I	TGATCA	1 cut(s)	1071
Kzo9I	GATC	3 cut(s)	237, 273, 1071
LmnI	GCTCC	6 cut(s)	162, 672, 753, 866, 923, 1132
Lsp1109I	GCAGC	4 cut(s)	285, 1051, 1302, 1470
LweI	GCATC	2 cut(s)	111, 514
MabI	ACCWGGT	1 cut(s)	493
MaeI	CTAG	3 cut(s)	387, 701, 1085
MaeIII	GTNAC	5 cut(s)	652, 847, 982, 1094, 1297
MalI	GATC	3 cut(s)	239, 275, 1073
MboI	GATC	3 cut(s)	237, 273, 1071
MboII	GAAGA	7 cut(s)	232, 526, 676, 754, 901, 937, 1261
MflI	RGATCY	1 cut(s)	237
MhlI	GDGCHC	7 cut(s)	348, 446, 835, 863, 1185, 1229, 1444
MlsI	TGGCCA	1 cut(s)	1196
MluCI	AATT	2 cut(s)	450, 1366
MluNI	TGGCCA	1 cut(s)	1196
MlyI	GAGTC	3 cut(s)	186, 287, 341
MmeI	TCCRAC	1 cut(s)	44
Mox20I	TGGCCA	1 cut(s)	1196
MroNI	GCCGGC	1 cut(s)	1318
MscI	TGGCCA	1 cut(s)	1196
MseI	TTAA	4 cut(s)	152, 531, 855, 1307
Msp20I	TGGCCA	1 cut(s)	1196
MspCI	CTTAAG	1 cut(s)	530
MspI	CCGG	5 cut(s)	255, 891, 1129, 1190, 1319
MspR9I	CCNGG	3 cut(s)	495, 1130, 1223
MvaI	CCWGG	2 cut(s)	495, 1223
MvnI	CGCG	5 cut(s)	289, 342, 1047, 1053, 1237
NaeI	GCCGGC	1 cut(s)	1320
NciI	CCSGG	1 cut(s)	1130
NcoI	CCATGG	1 cut(s)	1197
NdeII	GATC	3 cut(s)	237, 273, 1071
NgoMIV	GCCGGC	1 cut(s)	1318
NlaIII	CATG	8 cut(s)	79, 601, 808, 1072, 1201, 1219, 1358, 1504
NlaIV	GGNNCC	9 cut(s)	85, 158, 627, 749, 833, 862, 1120, 1134, 1257
NmuCI	GTSAC	4 cut(s)	652, 847, 982, 1094
NspI	RCATGY	1 cut(s)	1219
NspV	TTCGAA	1 cut(s)	778
PaqCI	CACCTGC	1 cut(s)	1133
PdiI	GCCGGC	1 cut(s)	1320
PfeI	GAWTC	3 cut(s)	215, 225, 780
PflFI	GACNNNGTC	1 cut(s)	941
PflMI	CCANNNNNTGG	5 cut(s)	64, 188, 563, 744, 1360
PkrI	GCNGC	6 cut(s)	300, 698, 1066, 1317, 1390, 1485
PleI	GAGTC	3 cut(s)	186, 286, 340
PpsI	GAGTC	3 cut(s)	186, 286, 340
PpuMI	RGGWCCY	1 cut(s)	84
Psp124BI	GAGCTC	1 cut(s)	1185
Psp5II	RGGWCCY	1 cut(s)	84
Psp6I	CCWGG	2 cut(s)	493, 1221
PspEI	GGTNACC	1 cut(s)	1094
PspFI	CCCAGC	1 cut(s)	1448
PspGI	CCWGG	2 cut(s)	493, 1221
PspN4I	GGNNCC	9 cut(s)	85, 158, 627, 749, 833, 862, 1120, 1134, 1257
PspOMI	GGGCCC	1 cut(s)	831
PspPI	GGNCC	6 cut(s)	84, 727, 831, 832, 1119, 1255
PspPPI	RGGWCCY	1 cut(s)	84
PsuI	RGATCY	1 cut(s)	237
PsyI	GACNNNGTC	1 cut(s)	941
RsaI	GTAC	1 cut(s)	552
RsaNI	GTAC	1 cut(s)	551
SacI	GAGCTC	1 cut(s)	1185
SaqAI	TTAA	4 cut(s)	152, 531, 855, 1307
SatI	GCNGC	6 cut(s)	299, 697, 1065, 1316, 1389, 1484
Sau3AI	GATC	3 cut(s)	237, 273, 1071
Sau96I	GGNCC	6 cut(s)	84, 727, 831, 832, 1119, 1255
SchI	GAGTC	3 cut(s)	186, 287, 341
ScrFI	CCNGG	3 cut(s)	495, 1130, 1223
SduI	GDGCHC	7 cut(s)	348, 446, 835, 863, 1185, 1229, 1444
SexAI	ACCWGGT	1 cut(s)	493
SfaNI	GCATC	2 cut(s)	111, 514
SfuI	TTCGAA	1 cut(s)	778
SinI	GGWCC	3 cut(s)	84, 1119, 1255
SmlI	CTYRAG	1 cut(s)	530
SmoI	CTYRAG	1 cut(s)	530
Sse9I	AATT	2 cut(s)	450, 1366
SspMI	CTAG	3 cut(s)	387, 701, 1085
SstI	GAGCTC	1 cut(s)	1185
StyD4I	CCNGG	3 cut(s)	493, 1128, 1221
StyI	CCWWGG	3 cut(s)	386, 421, 1197
TaaI	ACNGT	5 cut(s)	64, 436, 853, 982, 1033
TaqI	TCGA	7 cut(s)	27, 41, 276, 314, 778, 936, 1349
TaqII	GACCGA	1 cut(s)	953
TasI	AATT	2 cut(s)	450, 1366
TatI	WGTACW	1 cut(s)	550
TauI	GCSGC	2 cut(s)	699, 1391
TfiI	GAWTC	3 cut(s)	215, 225, 780
Tru1I	TTAA	4 cut(s)	152, 531, 855, 1307
Tru9I	TTAA	4 cut(s)	152, 531, 855, 1307
TscAI	CASTG	4 cut(s)	451, 481, 589, 657
TseFI	GTSAC	4 cut(s)	652, 847, 982, 1094
TseI	GCWGC	4 cut(s)	298, 1064, 1315, 1483
Tsp45I	GTSAC	4 cut(s)	652, 847, 982, 1094
TspDTI	ATGAA	3 cut(s)	586, 901, 1104
TspGWI	ACGGA	1 cut(s)	982
TspRI	CASTG	4 cut(s)	451, 481, 589, 657
Tth111I	GACNNNGTC	1 cut(s)	941
Van91I	CCANNNNNTGG	5 cut(s)	64, 188, 563, 744, 1360
Vha464I	CTTAAG	1 cut(s)	530
VpaK11BI	GGWCC	3 cut(s)	84, 1119, 1255
XceI	RCATGY	1 cut(s)	1219
XmaJI	CCTAGG	1 cut(s)	386
XspI	CTAG	3 cut(s)	387, 701, 1085

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.