Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0001278

Physical Location & Seq

Genomic Coordinates Reverse (-)

47978402 .. 47984245

Gene Structure 5844 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0327100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2055 bp

ATGACACACAACAAGATGAAGAGGCTCCTCCTACCAAGCCTCGAATGGATTGCCAACAACCAACTCGAAGATGGTTCTTGGGGCTACGAGGACATCTACTCCGCCCACGATCGGATCATCAGCACCCTCGCCTGCGTCGTCGCTTTGAAGTCGTGGAATCTCCACCCCGACAAATGCGACAAAGGAATGAAGTTTTTCAAGGAAAACCTAAACAAGCTGGAAGAAGAGAATATCGAACACATGCCTATTGGGTTCGAAGTTGCGTTTCCCTCTGTTCTGGAAATAGCTCGGAGCTTAAACCTTGAAGTGCCTGATGACTCACCTGTGTTGCATAAGATCTATGCCTGCAGAAACTTAAAACTAACCAAGATACCCAAGGACATACTGCACAAAGTGGCCACAACGCTTCTTCATAGCGTGGAAGGGATGGCAGGTCTCGACTGGGAAAAGCTTCTGAAACTCCAGTCCCAAGACGGCTCGTTTTTGTTCTCTCCGGCGTCCACTGCCTACGCGGCTCAGCAGACCAAGGACGGAAAATGCATGTCGTATCTGTCCAGAGCAGTCCGCAAGTTCAATGGAGGAGTCCCTAATGTTTACCCAGTCGACTTGTTCGAACACATGTGGGCTGTGGATCGGTTGCAGAGGTTAGGATTGTGCAGATACTTCGAGCCGGAGATTAAGGAGTGTATGAAGTACTGGACTGAGAAAGGGATTTGCTGGGCGAGAAACTCAGAGGTTCAAGACATCGATGACACAGCGATGGGGTTCAGACTGCTCCGGTTGCATGGGCACAAAGTGTCAGCTGATGTGTTTAAGCATTTTAAGAAAGGGGACGAGTTTTTCTGCTTTGCGGGACAATCGAACCAGGCTGTGACCGGAATGTACAACTTGTATAGGGCAAGTCAGGTGGCGTTACCGGGAGAGAAGATCCTCTATGAAGCCAAGGAGTTCTCGACAAAGTTCCTTAGGGAGAAGCAAGCTTCAAACGAGCTTCTAGACAAGTGGATCATAATGAAGGACTTGCCCGGAGAGGTGGGATATGCCCTTGATGTTCCATGGTATGCCAGCTTACCTCGACTAGAGACTAAATTCTATATCGAACAATATGGTGGTGAAGATGACGTATGGATTGGCAAGACTCTCTACAGTATGCCCTACGTTAACAATAATGTGTATCTTGAGCTGGCAAAGCTAGACTTCAACAATTGCCAAGCACTACATCTCAGTGAATGGGACAACCTTCAAAAGTGGTACGGAGAATGGAAAATTGGAGACTATGGACTAAGCAAAAAATGTCTCCTCATGGCTTATTTTGTTGCCGCAGCAAGTATTTTTGAACCTGAAAGAGCAAATGAGCGACTCGCATGGGCTAAGACGGCCTGCTTAGTTGACACGATTGAGGCTTATTTTAAGAGAGAAACTTCTCGTGAAGATAAGAAGGCATTTGTTGATGAGTTCAAAGACCTTTCAAATATGGGAGAGTATGAAGTTGCAAGGAGGTCGAATAGGAACAGGACTGCCGGGCAAGGAATTGTTGGGGCTTTGTTGGCGACGCTAAGCCAACTCTCATTGGGCACAATGGTGCTACATGGCCAAGACATTACCCAATCTCTACGTCAATCTTGGGAGAAGTGGCTACTGAAGTGGCTAGAGATAGGGGGAAGGCACCGAGATGAAGCTGAGCTACTAGTAGAAACGATAAATCAAACCGCTGGCCTTTCACTAACTGATGGGTTGTTGTCCAATAATCCAGAACATGAGCAGCTTTTTAGCCTGACTAACAAAGTTTGCAATCAACTTCGTTTTTGCCAAAACCAAAAGCACAAGATGAACAATAATGGCAGCTGCGGAACAAAAATGAACATGACTGCCAAAGCAATAGAATCAGACATGCAGCAGCTTGTGGAATTGGTGCTAAAATCTTCGGATGACATAGAATCCTTAATCAAGCAAAGCTTTTTCTTAGTAGCAAGGAGCTTTTATTATTCGACCTACTGTGACCCTAAAATTATTAGCCACCACATTGACAAAGTACTCTTCGAGAGAGCAATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko00010 ko00071 ko00190 ko00350 ko00625 ko00626 ko00680 ko00830 ko00980 ko00982 ko01100 ko01110 ko01120 ko01130 ko01200 ko01220 ko04260 ko04714 ko04932 ko05010 ko05012 ko05016 ko05204 map00010 map00071 map00190 map00350 map00625 map00626 map00680 map00830 map00980 map00982 map01100 map01110 map01120 map01130 map01200 map01220 map04260 map04714 map04932 map05010 map05012 map05016 map05204

Pfam Domains

Protein Families

ADH_N ADH_zinc_N

Protein Analysis

684

Amino Acids

78.56

Weight (kDa)

6.26

Isoelectric Point (pI)

41.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Terpene_synth	PF01397	147 - 349	1.7e-46	Terpene synthase, N-terminal domain
Terpene_synth_C	PF03936	429 - 550	1.4e-06	Terpene synthase family, metal binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001278)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G42250
fragaria_vesca	FvH4_2g37710 FvH4_2g37720 FvH4_2g37720 FvH4_2g37720 FvH4_2g37720 FvH4_2g37760 FvH4_2g37760 FvH4_2g37760 FvH4_2g37760 FvH4_2g37760 FvH4_2g37760 FvH4_2g37760 FvH4_2g37760 FvH4_2g37760 FvH4_2g37760
malus_domestica	MD15G1004100.v1.1
prunus_persica	Prupe.1G356700_v2.0.a1 Prupe.1G356700_v2.0.a1 Prupe.1G356700_v2.0.a1 Prupe.1G356700_v2.0.a1 Prupe.1G356700_v2.0.a1 Prupe.1G543900_v2.0.a1 Prupe.1G543900_v2.0.a1 Prupe.1G543900_v2.0.a1 Prupe.1G543900_v2.0.a1
pyrus_communis	pycom15g00290
rosa_chinensis	RchiOBHm_Chr6g0303981 RchiOBHm_Chr6g0303991 RchiOBHm_Chr6g0304011
rosa_laevigata	RLG00000011016 RLG00000011028
rosa_multiflora	Rmu_co8412721.1_g000001 Rmu_sc0003805.1_g000017 Rmu_sc0003805.1_g000019 Rmu_sc0019860.1_g000001
rosa_roxburghii	Rroxscaffold_7G00164180 Rroxscaffold_7G00164210
rosa_rugosa	Rorug06G0326500 Rorug06G0326500 Rorug06G0326500 Rorug06G0326500 Rorug06G0326600 Rorug06G0326700 Rorug06G0326800 Rorug06G0326900 Rorug06G0327000 Rorug06G0327100 Rorug06G0327100 Rorug06G0327100
rosa_samantha	Rh6BG462000 Rh6DG440000 Rh6DG440300
rosa_wichuraiana	Rw6G038180 Rw6G038190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	422
AccB1I	GGYRCC	1 cut(s)	1665
AccI	GTMKAC	1 cut(s)	603
AccII	CGCG	1 cut(s)	512
AciI	CCGC	7 cut(s)	102, 512, 565, 851, 1320, 1710, 1848
AclWI	GGATC	4 cut(s)	122, 639, 922, 1013
AcoI	YGGCCR	2 cut(s)	396, 1591
AcsI	RAATTY	1 cut(s)	1088
AcuI	CTGAAG	1 cut(s)	1661
AcyI	GRCGYC	1 cut(s)	497
AdeI	CACNNNGTG	2 cut(s)	394, 796
AfaI	GTAC	4 cut(s)	695, 884, 1253, 2034
AfiI	CCNNNNNNNGG	1 cut(s)	111
AflIII	ACRYGT	1 cut(s)	618
AhlI	ACTAGT	1 cut(s)	1687
AjnI	CCWGG	1 cut(s)	864
AjuI	GAANNNNNNNTTGG	2 cut(s)	1251, 1283
AleI	CACNNNNGTG	1 cut(s)	1580
Alw26I	GTCTC	4 cut(s)	440, 1076, 1266, 1301
AlwI	GGATC	4 cut(s)	122, 639, 922, 1013
AoxI	GGCC	4 cut(s)	396, 1377, 1591, 1714
ApeKI	GCWGC	6 cut(s)	1322, 1762, 1842, 1845, 1894, 1897
ApoI	RAATTY	1 cut(s)	1088
Asp700I	GAANNNNTTC	2 cut(s)	194, 450
AsuC2I	CCSGG	3 cut(s)	918, 1026, 1522
AsuHPI	GGTGA	2 cut(s)	312, 1124
AsuII	TTCGAA	2 cut(s)	255, 612
AxyI	CCTNAGG	1 cut(s)	965
BaeGI	GKGCMC	2 cut(s)	792, 1577
BalI	TGGCCA	2 cut(s)	398, 1593
BanI	GGYRCC	1 cut(s)	1665
BarI	GAAGNNNNNNTAC	2 cut(s)	1668, 1700
BauI	CACGAG	1 cut(s)	1425
BbvI	GCAGC	6 cut(s)	1334, 1774, 1832, 1854, 1906, 1909
BccI	CCATC	4 cut(s)	65, 421, 754, 1724
BceAI	ACGGC	2 cut(s)	490, 1392
BcgI	CGANNNNNNTGC	6 cut(s)	32, 66, 646, 680, 1482, 1516
BciT130I	CCWGG	1 cut(s)	866
BcnI	CCSGG	3 cut(s)	918, 1026, 1522
BcoDI	GTCTC	4 cut(s)	440, 1076, 1266, 1301
BcuI	ACTAGT	1 cut(s)	1687
BfaI	CTAG	5 cut(s)	995, 1079, 1193, 1649, 1688
BfmI	CTRYAG	2 cut(s)	346, 1144
BfuAI	ACCTGC	1 cut(s)	422
BglI	GCCNNNNNGGC	1 cut(s)	512
BglII	AGATCT	1 cut(s)	336
BisI	GCNGC	8 cut(s)	513, 1320, 1323, 1763, 1843, 1846, 1895, 1898
BlpI	GCTNAGC	3 cut(s)	516, 1556, 1680
BlsI	GCNGC	8 cut(s)	514, 1321, 1324, 1764, 1844, 1847, 1896, 1899
BmcAI	AGTACT	2 cut(s)	695, 2034
Bme1390I	CCNGG	4 cut(s)	866, 918, 1026, 1522
BmiI	GGNNCC	2 cut(s)	26, 1667
BmrFI	CCNGG	4 cut(s)	866, 918, 1026, 1522
BmrI	ACTGGG	2 cut(s)	451, 593
BmuI	ACTGGG	2 cut(s)	451, 593
BpmI	CTGGAG	1 cut(s)	446
Bpu1102I	GCTNAGC	3 cut(s)	516, 1556, 1680
Bpu14I	TTCGAA	2 cut(s)	255, 612
BpuEI	CTTGAG	1 cut(s)	1199
BpuMI	CCSGG	3 cut(s)	918, 1026, 1522
Bsa29I	ATCGAT	1 cut(s)	747
BsaHI	GRCGYC	1 cut(s)	497
BsaI	GGTCTC	1 cut(s)	440
BsaJI	CCNNGG	4 cut(s)	375, 525, 942, 1055
BsaWI	WCCGGW	2 cut(s)	777, 875
BsaXI	ACNNNNNCTCC	2 cut(s)	83, 113
Bsc4I	CCNNNNNNNGG	1 cut(s)	111
Bse1I	ACTGG	4 cut(s)	446, 463, 599, 701
Bse21I	CCTNAGG	1 cut(s)	965
BseBI	CCWGG	1 cut(s)	866
BseCI	ATCGAT	1 cut(s)	747
BseDI	CCNNGG	4 cut(s)	375, 525, 942, 1055
BseGI	GGATG	2 cut(s)	432, 1933
BseLI	CCNNNNNNNGG	1 cut(s)	111
BseMII	CTCAG	5 cut(s)	530, 693, 744, 1237, 1671
BseNI	ACTGG	4 cut(s)	446, 463, 599, 701
BseRI	GAGGAG	3 cut(s)	17, 594, 1289
BseSI	GKGCMC	2 cut(s)	792, 1577
BseXI	GCAGC	6 cut(s)	1334, 1774, 1832, 1854, 1906, 1909
BseYI	CCCAGC	1 cut(s)	717
BsgI	GTGCAG	2 cut(s)	371, 676
Bsh1236I	CGCG	1 cut(s)	512
Bsh1285I	CGRYCG	1 cut(s)	112
BshFI	GGCC	4 cut(s)	398, 1379, 1593, 1716
BshNI	GGYRCC	1 cut(s)	1665
BshVI	ATCGAT	1 cut(s)	747
BsiEI	CGRYCG	1 cut(s)	112
BsiSI	CCGG	7 cut(s)	494, 671, 778, 876, 917, 1026, 1521
BslFI	GGGAC	5 cut(s)	451, 569, 845, 867, 1247
BslI	CCNNNNNNNGG	1 cut(s)	111
BsmAI	GTCTC	4 cut(s)	440, 1076, 1266, 1301
BsmFI	GGGAC	5 cut(s)	451, 569, 845, 867, 1247
BsnI	GGCC	4 cut(s)	398, 1379, 1593, 1716
Bso31I	GGTCTC	1 cut(s)	440
Bsp119I	TTCGAA	2 cut(s)	255, 612
Bsp1286I	GDGCHC	2 cut(s)	792, 1577
Bsp1407I	TGTACA	1 cut(s)	882
Bsp143I	GATC	6 cut(s)	109, 114, 336, 631, 927, 1005
Bsp1720I	GCTNAGC	3 cut(s)	516, 1556, 1680
Bsp19I	CCATGG	1 cut(s)	1055
BspACI	CCGC	7 cut(s)	102, 512, 565, 851, 1320, 1710, 1848
BspANI	GGCC	4 cut(s)	398, 1379, 1593, 1716
BspCNI	CTCAG	5 cut(s)	529, 694, 743, 1236, 1672
BspDI	ATCGAT	1 cut(s)	747
BspFNI	CGCG	1 cut(s)	512
BspLI	GGNNCC	2 cut(s)	26, 1667
BspMAI	CTGCAG	1 cut(s)	350
BspMI	ACCTGC	1 cut(s)	422
BspPI	GGATC	4 cut(s)	122, 639, 922, 1013
BspT104I	TTCGAA	2 cut(s)	255, 612
BspT107I	GGYRCC	1 cut(s)	1665
BspTNI	GGTCTC	1 cut(s)	440
BsrGI	TGTACA	1 cut(s)	882
BsrI	ACTGG	4 cut(s)	446, 463, 599, 701
BssECI	CCNNGG	4 cut(s)	375, 525, 942, 1055
BssMI	GATC	6 cut(s)	109, 114, 336, 631, 927, 1005
BssNI	GRCGYC	1 cut(s)	497
BssSI	CACGAG	1 cut(s)	1425
BssT1I	CCWWGG	4 cut(s)	375, 525, 942, 1055
Bst2BI	CACGAG	1 cut(s)	1425
Bst2UI	CCWGG	1 cut(s)	866
Bst4CI	ACNGT	2 cut(s)	1148, 1997
Bst6I	CTCTTC	3 cut(s)	14, 219, 2042
BstACI	GRCGYC	1 cut(s)	497
BstAUI	TGTACA	1 cut(s)	882
BstBI	TTCGAA	2 cut(s)	255, 612
BstC8I	GCNNGC	7 cut(s)	133, 346, 978, 1066, 1185, 1381, 1714
BstDSI	CCRYGG	1 cut(s)	1055
BstF5I	GGATG	2 cut(s)	432, 1933
BstFNI	CGCG	1 cut(s)	512
BstKTI	GATC	6 cut(s)	112, 117, 339, 634, 930, 1008
BstMAI	GTCTC	4 cut(s)	440, 1076, 1266, 1301
BstMBI	GATC	6 cut(s)	109, 114, 336, 631, 927, 1005
BstMCI	CGRYCG	1 cut(s)	112
BstMWI	GCNNNNNNNGC	6 cut(s)	503, 512, 781, 1189, 1376, 1547
BstNI	CCWGG	1 cut(s)	866
BstNSI	RCATGY	4 cut(s)	244, 544, 622, 1894
BstSCI	CCNGG	4 cut(s)	864, 916, 1024, 1520
BstSFI	CTRYAG	2 cut(s)	346, 1144
BstSLI	GKGCMC	2 cut(s)	792, 1577
BstUI	CGCG	1 cut(s)	512
BstV1I	GCAGC	6 cut(s)	1334, 1774, 1832, 1854, 1906, 1909
BstX2I	RGATCY	2 cut(s)	336, 927
BstYI	RGATCY	2 cut(s)	336, 927
Bsu15I	ATCGAT	1 cut(s)	747
Bsu36I	CCTNAGG	1 cut(s)	965
BsuRI	GGCC	4 cut(s)	398, 1379, 1593, 1716
BsuTUI	ATCGAT	1 cut(s)	747
BtgI	CCRYGG	1 cut(s)	1055
BtgZI	GCGATG	1 cut(s)	773
BtsCI	GGATG	2 cut(s)	432, 1933
BtsI	GCAGTG	1 cut(s)	501
BtsIMutI	CAGTG	2 cut(s)	501, 1231
BveI	ACCTGC	1 cut(s)	422
Cac8I	GCNNGC	7 cut(s)	133, 346, 978, 1066, 1185, 1381, 1714
ClaI	ATCGAT	1 cut(s)	747
CseI	GACGC	3 cut(s)	124, 486, 1561
Csp6I	GTAC	4 cut(s)	694, 883, 1252, 2033
CspCI	CAANNNNNGTGG	2 cut(s)	888, 923
CviQI	GTAC	4 cut(s)	694, 883, 1252, 2033
DpnI	GATC	6 cut(s)	111, 116, 338, 633, 929, 1007
DpnII	GATC	6 cut(s)	109, 114, 336, 631, 927, 1005
DraIII	CACNNNGTG	2 cut(s)	394, 796
EaeI	YGGCCR	2 cut(s)	396, 1591
Eam1104I	CTCTTC	3 cut(s)	14, 219, 2042
EarI	CTCTTC	3 cut(s)	14, 219, 2042
EciI	GGCGGA	1 cut(s)	91
Eco130I	CCWWGG	4 cut(s)	375, 525, 942, 1055
Eco31I	GGTCTC	1 cut(s)	440
Eco57I	CTGAAG	1 cut(s)	1661
Eco81I	CCTNAGG	1 cut(s)	965
EcoRII	CCWGG	1 cut(s)	864
EcoT14I	CCWWGG	4 cut(s)	375, 525, 942, 1055
EcoT22I	ATGCAT	1 cut(s)	542
ErhI	CCWWGG	4 cut(s)	375, 525, 942, 1055
FalI	AAGNNNNNCTT	4 cut(s)	1181, 1213, 1940, 1972
FaqI	GGGAC	5 cut(s)	451, 569, 845, 867, 1247
FauI	CCCGC	1 cut(s)	844
FblI	GTMKAC	1 cut(s)	603
Fnu4HI	GCNGC	8 cut(s)	513, 1320, 1323, 1763, 1843, 1846, 1895, 1898
FokI	GGATG	2 cut(s)	439, 1940
Fsp4HI	GCNGC	8 cut(s)	513, 1320, 1323, 1763, 1843, 1846, 1895, 1898
FspBI	CTAG	5 cut(s)	995, 1079, 1193, 1649, 1688
GluI	GCNGC	8 cut(s)	513, 1320, 1323, 1763, 1843, 1846, 1895, 1898
GsaI	CCCAGC	1 cut(s)	721
GsuI	CTGGAG	1 cut(s)	446
HaeIII	GGCC	4 cut(s)	398, 1379, 1593, 1716
HapII	CCGG	7 cut(s)	494, 671, 778, 876, 917, 1026, 1521
HgaI	GACGC	3 cut(s)	124, 486, 1561
Hin1I	GRCGYC	1 cut(s)	497
HincII	GTYRAC	3 cut(s)	604, 1162, 1390
HindII	GTYRAC	3 cut(s)	604, 1162, 1390
HindIII	AAGCTT	3 cut(s)	449, 978, 1954
HinfI	GANTC	7 cut(s)	157, 317, 582, 1138, 1359, 1883, 1937
HpaI	GTTAAC	1 cut(s)	1162
HpaII	CCGG	7 cut(s)	494, 671, 778, 876, 917, 1026, 1521
HphI	GGTGA	2 cut(s)	312, 1124
Hpy166II	GTNNAC	5 cut(s)	501, 595, 604, 1162, 1390
Hpy188I	TCNGA	7 cut(s)	114, 291, 456, 733, 770, 1888, 1927
Hpy8I	GTNNAC	5 cut(s)	501, 595, 604, 1162, 1390
Hpy99I	CGWCG	3 cut(s)	140, 143, 1555
HpyAV	CCTTC	5 cut(s)	416, 1009, 1250, 1432, 1656
HpyCH4III	ACNGT	2 cut(s)	1148, 1997
HpyCH4IV	ACGT	3 cut(s)	1122, 1158, 1615
HpyF10VI	GCNNNNNNNGC	6 cut(s)	503, 512, 781, 1189, 1376, 1547
HpySE526I	ACGT	3 cut(s)	1122, 1158, 1615
Hsp92I	GRCGYC	1 cut(s)	497
KspAI	GTTAAC	1 cut(s)	1162
Kzo9I	GATC	6 cut(s)	109, 114, 336, 631, 927, 1005
LmnI	GCTCC	4 cut(s)	30, 291, 780, 1974
Lsp1109I	GCAGC	6 cut(s)	1334, 1774, 1832, 1854, 1906, 1909
MaeI	CTAG	5 cut(s)	995, 1079, 1193, 1649, 1688
MaeII	ACGT	3 cut(s)	1122, 1158, 1615
MaeIII	GTNAC	3 cut(s)	871, 912, 1997
MalI	GATC	6 cut(s)	111, 116, 338, 633, 929, 1007
MboI	GATC	6 cut(s)	109, 114, 336, 631, 927, 1005
MfeI	CAATTG	1 cut(s)	1204
MflI	RGATCY	2 cut(s)	336, 927
MhlI	GDGCHC	2 cut(s)	792, 1577
MlsI	TGGCCA	2 cut(s)	398, 1593
MluCI	AATT	7 cut(s)	1088, 1204, 1266, 1530, 1907, 2007, 2049
MluNI	TGGCCA	2 cut(s)	398, 1593
MlyI	GAGTC	4 cut(s)	311, 591, 1132, 1353
Mox20I	TGGCCA	2 cut(s)	398, 1593
Mph1103I	ATGCAT	1 cut(s)	542
MroXI	GAANNNNTTC	2 cut(s)	194, 450
MscI	TGGCCA	2 cut(s)	398, 1593
MseI	TTAA	8 cut(s)	296, 356, 678, 813, 822, 1161, 1410, 1943
MslI	CAYNNNNRTG	4 cut(s)	758, 1224, 1580, 1671
Msp20I	TGGCCA	2 cut(s)	398, 1593
MspA1I	CMGCKG	3 cut(s)	803, 1712, 1845
MspI	CCGG	7 cut(s)	494, 671, 778, 876, 917, 1026, 1521
MspR9I	CCNGG	4 cut(s)	866, 918, 1026, 1522
MunI	CAATTG	1 cut(s)	1204
MvaI	CCWGG	1 cut(s)	866
MvnI	CGCG	1 cut(s)	512
MwoI	GCNNNNNNNGC	6 cut(s)	503, 512, 781, 1189, 1376, 1547
NciI	CCSGG	3 cut(s)	918, 1026, 1522
NcoI	CCATGG	1 cut(s)	1055
NdeII	GATC	6 cut(s)	109, 114, 336, 631, 927, 1005
NlaIV	GGNNCC	2 cut(s)	26, 1667
NmuCI	GTSAC	2 cut(s)	871, 1997
NsiI	ATGCAT	1 cut(s)	542
NspI	RCATGY	4 cut(s)	244, 544, 622, 1894
NspV	TTCGAA	2 cut(s)	255, 612
OliI	CACNNNNGTG	1 cut(s)	1580
PciI	ACATGT	1 cut(s)	618
PcsI	WCGNNNNNNNCGW	2 cut(s)	135, 609
PdmI	GAANNNNTTC	2 cut(s)	194, 450
PfeI	GAWTC	3 cut(s)	157, 1883, 1937
PkrI	GCNGC	8 cut(s)	514, 1321, 1324, 1764, 1844, 1847, 1896, 1899
Ple19I	CGATCG	1 cut(s)	112
PleI	GAGTC	4 cut(s)	311, 590, 1132, 1353
PpsI	GAGTC	4 cut(s)	311, 590, 1132, 1353
PscI	ACATGT	1 cut(s)	618
Psp6I	CCWGG	1 cut(s)	864
PspFI	CCCAGC	1 cut(s)	717
PspGI	CCWGG	1 cut(s)	864
PspN4I	GGNNCC	2 cut(s)	26, 1667
PstI	CTGCAG	1 cut(s)	350
PsuI	RGATCY	2 cut(s)	336, 927
PvuI	CGATCG	1 cut(s)	112
PvuII	CAGCTG	2 cut(s)	803, 1845
RsaI	GTAC	4 cut(s)	695, 884, 1253, 2034
RsaNI	GTAC	4 cut(s)	694, 883, 1252, 2033
RseI	CAYNNNNRTG	4 cut(s)	758, 1224, 1580, 1671
SalI	GTCGAC	1 cut(s)	602
SaqAI	TTAA	8 cut(s)	296, 356, 678, 813, 822, 1161, 1410, 1943
SatI	GCNGC	8 cut(s)	513, 1320, 1323, 1763, 1843, 1846, 1895, 1898
Sau3AI	GATC	6 cut(s)	109, 114, 336, 631, 927, 1005
ScaI	AGTACT	2 cut(s)	695, 2034
SchI	GAGTC	4 cut(s)	311, 591, 1132, 1353
ScrFI	CCNGG	4 cut(s)	866, 918, 1026, 1522
SduI	GDGCHC	2 cut(s)	792, 1577
SfcI	CTRYAG	2 cut(s)	346, 1144
SfuI	TTCGAA	2 cut(s)	255, 612
SmiMI	CAYNNNNRTG	4 cut(s)	758, 1224, 1580, 1671
SmlI	CTYRAG	1 cut(s)	1178
SmoI	CTYRAG	1 cut(s)	1178
SpeI	ACTAGT	1 cut(s)	1687
Sse9I	AATT	7 cut(s)	1088, 1204, 1266, 1530, 1907, 2007, 2049
SsiI	CCGC	7 cut(s)	102, 512, 565, 851, 1320, 1710, 1848
SspMI	CTAG	5 cut(s)	995, 1079, 1193, 1649, 1688
StyD4I	CCNGG	4 cut(s)	864, 916, 1024, 1520
StyI	CCWWGG	4 cut(s)	375, 525, 942, 1055
TaaI	ACNGT	2 cut(s)	1148, 1997
TaiI	ACGT	3 cut(s)	1125, 1161, 1618
TasI	AATT	7 cut(s)	1088, 1204, 1266, 1530, 1907, 2007, 2049
TatI	WGTACW	3 cut(s)	693, 882, 2032
TauI	GCSGC	2 cut(s)	515, 1322
TfiI	GAWTC	3 cut(s)	157, 1883, 1937
Tru1I	TTAA	8 cut(s)	296, 356, 678, 813, 822, 1161, 1410, 1943
Tru9I	TTAA	8 cut(s)	296, 356, 678, 813, 822, 1161, 1410, 1943
TscAI	CASTG	2 cut(s)	508, 1231
TseFI	GTSAC	2 cut(s)	871, 1997
TseI	GCWGC	6 cut(s)	1322, 1762, 1842, 1845, 1894, 1897
Tsp45I	GTSAC	2 cut(s)	871, 1997
TspGWI	ACGGA	2 cut(s)	546, 1269
TspRI	CASTG	2 cut(s)	508, 1231
XapI	RAATTY	1 cut(s)	1088
XbaI	TCTAGA	1 cut(s)	994
XceI	RCATGY	4 cut(s)	244, 544, 622, 1894
XcmI	CCANNNNNNNNNTGG	2 cut(s)	42, 68
XmiI	GTMKAC	1 cut(s)	603
XmnI	GAANNNNTTC	2 cut(s)	194, 450
XspI	CTAG	5 cut(s)	995, 1079, 1193, 1649, 1688
ZrmI	AGTACT	2 cut(s)	695, 2034
Zsp2I	ATGCAT	1 cut(s)	542

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.