Rh1AG219000

dual specificity protein phosphatase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
Physical Location & Seq
Forward (+)
41635630 .. 41648632
13003 bp
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UTR
Exon/CDS
Intron
Rh1AG219000.1

Sequence Viewer

Length: 246 bp
ATGTCATCAGGAATAAGCTTCAAGCTAAGTGGTGAGGTGCCTCACTTAAAGGAGGTCGGAGTTCGTGGAGTCATCACACTTAATGAGCCATATGAGACTGGTTCCAACATCTCTTTATCAGTAACCTTTCTCGATACGATGTCGTCTTCTTTACCTTCTCCTACCCCAAACGCTCACATGCTTCTCATTTTCCCGCCAAAACAACTTTCCCAACCTCAAAACGAAAATCCACGAATCGAAGTTTGA

Protein Analysis

81

Amino Acids

8.79

Weight (kDa)

5.5

Isoelectric Point (pI)

54.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 37
AciI CCGC 1 cut(s) 194
AgsI TTSAA 1 cut(s) 22
AjuI GAANNNNNNNTTGG 2 cut(s) 190, 222
AluBI AGCT 2 cut(s) 18, 25
AluI AGCT 2 cut(s) 18, 25
Alw26I GTCTC 1 cut(s) 89
AsuHPI GGTGA 1 cut(s) 44
BanI GGYRCC 1 cut(s) 37
BbsI GAAGAC 1 cut(s) 138
BcoDI GTCTC 1 cut(s) 89
BmiI GGNNCC 2 cut(s) 39, 103
BpiI GAAGAC 1 cut(s) 138
Bse1I ACTGG 1 cut(s) 103
BseNI ACTGG 1 cut(s) 103
BshNI GGYRCC 1 cut(s) 37
BsmAI GTCTC 1 cut(s) 89
BspACI CCGC 1 cut(s) 194
BspLI GGNNCC 2 cut(s) 39, 103
BspT107I GGYRCC 1 cut(s) 37
BsrI ACTGG 1 cut(s) 103
BstDEI CTNAG 1 cut(s) 26
BstMAI GTCTC 1 cut(s) 89
BstNSI RCATGY 1 cut(s) 181
BstV2I GAAGAC 1 cut(s) 138
CspCI CAANNNNNGTGG 2 cut(s) 10, 45
CviAII CATG 1 cut(s) 178
CviJI RGCY 3 cut(s) 18, 25, 88
CviKI_1 RGCY 3 cut(s) 18, 25, 88
DdeI CTNAG 1 cut(s) 26
FaeI CATG 1 cut(s) 181
FaiI YATR 3 cut(s) 91, 93, 179
FatI CATG 1 cut(s) 177
FauI CCCGC 1 cut(s) 201
FauNDI CATATG 1 cut(s) 91
Hin1II CATG 1 cut(s) 181
HindIII AAGCTT 1 cut(s) 16
HinfI GANTC 2 cut(s) 69, 234
HphI GGTGA 1 cut(s) 44
Hpy188I TCNGA 1 cut(s) 59
Hpy188III TCNNGA 2 cut(s) 9, 131
HpyAV CCTTC 1 cut(s) 165
HpyF3I CTNAG 1 cut(s) 26
Hsp92II CATG 1 cut(s) 181
LpnPI CCDG 1 cut(s) 84
MaeIII GTNAC 1 cut(s) 121
MboII GAAGA 1 cut(s) 138
MlyI GAGTC 1 cut(s) 78
MmeI TCCRAC 2 cut(s) 37, 129
MnlI CCTC 4 cut(s) 28, 46, 51, 225
MseI TTAA 2 cut(s) 47, 81
NdeI CATATG 1 cut(s) 91
NlaIII CATG 1 cut(s) 181
NlaIV GGNNCC 2 cut(s) 39, 103
NspI RCATGY 1 cut(s) 181
PfeI GAWTC 1 cut(s) 234
PleI GAGTC 1 cut(s) 77
PpsI GAGTC 1 cut(s) 77
PspN4I GGNNCC 2 cut(s) 39, 103
SaqAI TTAA 2 cut(s) 47, 81
SchI GAGTC 1 cut(s) 78
SetI ASST 7 cut(s) 20, 27, 39, 57, 128, 157, 217
SgeI CNNG 7 cut(s) 21, 34, 77, 111, 143, 190, 205
SsiI CCGC 1 cut(s) 194
TaqI TCGA 2 cut(s) 132, 237
TfiI GAWTC 1 cut(s) 234
Tru1I TTAA 2 cut(s) 47, 81
Tru9I TTAA 2 cut(s) 47, 81
XceI RCATGY 1 cut(s) 181
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.