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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD01G1068900.v1.1 |
| rosa_chinensis | RchiOBHm_Chr1g0328881 RchiOBHm_Chr2g0103941 RchiOBHm_Chr2g0148771 RchiOBHm_Chr5g0081751 RchiOBHm_Chr6g0251601 RchiOBHm_Chr6g0252891 RchiOBHm_Chr6g0261041 |
| rosa_laevigata | RLG00000009276 |
| rosa_multiflora | Rmu_sc0002607.1_g000054 |
| rosa_roxburghii | Rroxscaffold_3G00226620 Rroxscaffold_3G00261660 Rroxscaffold_6G00387930 Rroxscaffold_7G00214780 |
| rosa_rugosa | Rorug01G0154400.1 Rorug02G0266600.1 Rorug03G0008400 Rorug03G0200100 Rorug05G0519500 Rorug06G0005400.1 Rorug06G0320100 Rorug07G0042900 |
| rosa_samantha | Rh1AG156000 Rh1AG219000 Rh1BG044200 Rh1DG160300 Rh2BG398200 Rh2BG403900 Rh2BG460500 Rh2CG000900 Rh2CG307500 Rh2CG547200 Rh2DG469900 Rh4CG118200 Rh4DG178300 Rh5CG178000 Rh5CG304800 Rh5CG363400 Rh5DG164400 Rh6AG114000 Rh6AG247400 Rh6BG059200 Rh6BG107600 Rh6CG031400 Rh6CG104700 Rh6DG029900 Rh6DG095500 Rh7BG290500 |
| rosa_wichuraiana | Rw1G002350 Rw4G023590 Rw5G005770 Rw6G009740 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclI | AACGTT | 1 cut(s) | 417 |
| AclWI | GGATC | 1 cut(s) | 171 |
| AcsI | RAATTY | 3 cut(s) | 28, 139, 439 |
| AcuI | CTGAAG | 2 cut(s) | 21, 399 |
| AdeI | CACNNNGTG | 1 cut(s) | 14 |
| AfaI | GTAC | 1 cut(s) | 178 |
| AgsI | TTSAA | 3 cut(s) | 201, 477, 540 |
| AjnI | CCWGG | 1 cut(s) | 242 |
| AluBI | AGCT | 2 cut(s) | 356, 374 |
| AluI | AGCT | 2 cut(s) | 356, 374 |
| Alw21I | GWGCWC | 1 cut(s) | 286 |
| Alw26I | GTCTC | 1 cut(s) | 250 |
| AlwI | GGATC | 1 cut(s) | 171 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 377 |
| ApeKI | GCWGC | 3 cut(s) | 41, 356, 422 |
| ApoI | RAATTY | 3 cut(s) | 28, 139, 439 |
| AsuHPI | GGTGA | 2 cut(s) | 166, 311 |
| Bbv12I | GWGCWC | 1 cut(s) | 286 |
| BbvCI | CCTCAGC | 1 cut(s) | 102 |
| BbvI | GCAGC | 3 cut(s) | 53, 343, 409 |
| BccI | CCATC | 2 cut(s) | 66, 226 |
| BceAI | ACGGC | 1 cut(s) | 114 |
| BciT130I | CCWGG | 1 cut(s) | 244 |
| BclI | TGATCA | 1 cut(s) | 16 |
| BcoDI | GTCTC | 1 cut(s) | 250 |
| BfaI | CTAG | 1 cut(s) | 306 |
| BfmI | CTRYAG | 1 cut(s) | 496 |
| BisI | GCNGC | 3 cut(s) | 42, 357, 423 |
| BlsI | GCNGC | 3 cut(s) | 43, 358, 424 |
| Bme1390I | CCNGG | 1 cut(s) | 244 |
| BmrFI | CCNGG | 1 cut(s) | 244 |
| BmsI | GCATC | 3 cut(s) | 191, 368, 467 |
| Bpu10I | CCTNAGC | 1 cut(s) | 102 |
| Bsa29I | ATCGAT | 1 cut(s) | 468 |
| BsaBI | GATNNNNATC | 1 cut(s) | 21 |
| Bse8I | GATNNNNATC | 1 cut(s) | 21 |
| BseBI | CCWGG | 1 cut(s) | 244 |
| BseCI | ATCGAT | 1 cut(s) | 468 |
| BseGI | GGATG | 1 cut(s) | 218 |
| BseJI | GATNNNNATC | 1 cut(s) | 21 |
| BseMII | CTCAG | 2 cut(s) | 93, 377 |
| BseXI | GCAGC | 3 cut(s) | 53, 343, 409 |
| BsgI | GTGCAG | 1 cut(s) | 408 |
| BshVI | ATCGAT | 1 cut(s) | 468 |
| BsiHKAI | GWGCWC | 1 cut(s) | 286 |
| BslFI | GGGAC | 1 cut(s) | 466 |
| BsmAI | GTCTC | 1 cut(s) | 250 |
| BsmFI | GGGAC | 1 cut(s) | 466 |
| Bsp1286I | GDGCHC | 1 cut(s) | 286 |
| Bsp143I | GATC | 3 cut(s) | 16, 163, 265 |
| BspCNI | CTCAG | 2 cut(s) | 94, 376 |
| BspDI | ATCGAT | 1 cut(s) | 468 |
| BspHI | TCATGA | 1 cut(s) | 406 |
| BspPI | GGATC | 1 cut(s) | 171 |
| BssMI | GATC | 3 cut(s) | 16, 163, 265 |
| Bst2UI | CCWGG | 1 cut(s) | 244 |
| Bst4CI | ACNGT | 3 cut(s) | 12, 82, 517 |
| BstDEI | CTNAG | 2 cut(s) | 102, 363 |
| BstF5I | GGATG | 1 cut(s) | 218 |
| BstKTI | GATC | 3 cut(s) | 19, 166, 268 |
| BstMAI | GTCTC | 1 cut(s) | 250 |
| BstMBI | GATC | 3 cut(s) | 16, 163, 265 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 41, 380 |
| BstNI | CCWGG | 1 cut(s) | 244 |
| BstSCI | CCNGG | 1 cut(s) | 242 |
| BstSFI | CTRYAG | 1 cut(s) | 496 |
| BstV1I | GCAGC | 3 cut(s) | 53, 343, 409 |
| BstX2I | RGATCY | 1 cut(s) | 163 |
| BstYI | RGATCY | 1 cut(s) | 163 |
| Bsu15I | ATCGAT | 1 cut(s) | 468 |
| BsuTUI | ATCGAT | 1 cut(s) | 468 |
| BtgZI | GCGATG | 1 cut(s) | 324 |
| BtsCI | GGATG | 1 cut(s) | 218 |
| BtsIMutI | CAGTG | 3 cut(s) | 17, 87, 270 |
| CaiI | CAGNNNCTG | 1 cut(s) | 377 |
| CciI | TCATGA | 1 cut(s) | 406 |
| ClaI | ATCGAT | 1 cut(s) | 468 |
| Csp6I | GTAC | 1 cut(s) | 177 |
| CviAII | CATG | 1 cut(s) | 407 |
| CviJI | RGCY | 4 cut(s) | 101, 107, 356, 374 |
| CviKI_1 | RGCY | 4 cut(s) | 101, 107, 356, 374 |
| CviQI | GTAC | 1 cut(s) | 177 |
| DdeI | CTNAG | 2 cut(s) | 102, 363 |
| DpnI | GATC | 3 cut(s) | 18, 165, 267 |
| DpnII | GATC | 3 cut(s) | 16, 163, 265 |
| DraIII | CACNNNGTG | 1 cut(s) | 14 |
| Eco57I | CTGAAG | 2 cut(s) | 21, 399 |
| EcoRI | GAATTC | 1 cut(s) | 28 |
| EcoRII | CCWGG | 1 cut(s) | 242 |
| FaeI | CATG | 1 cut(s) | 410 |
| FaqI | GGGAC | 1 cut(s) | 466 |
| FatI | CATG | 1 cut(s) | 406 |
| FbaI | TGATCA | 1 cut(s) | 16 |
| Fnu4HI | GCNGC | 3 cut(s) | 42, 357, 423 |
| FokI | GGATG | 1 cut(s) | 205 |
| Fsp4HI | GCNGC | 3 cut(s) | 42, 357, 423 |
| FspBI | CTAG | 1 cut(s) | 306 |
| GluI | GCNGC | 3 cut(s) | 42, 357, 423 |
| Hin1II | CATG | 1 cut(s) | 410 |
| HincII | GTYRAC | 1 cut(s) | 6 |
| HindII | GTYRAC | 1 cut(s) | 6 |
| HinfI | GANTC | 1 cut(s) | 314 |
| HphI | GGTGA | 2 cut(s) | 166, 311 |
| Hpy166II | GTNNAC | 3 cut(s) | 6, 89, 157 |
| Hpy188I | TCNGA | 1 cut(s) | 27 |
| Hpy188III | TCNNGA | 4 cut(s) | 57, 234, 399, 407 |
| Hpy8I | GTNNAC | 3 cut(s) | 6, 89, 157 |
| HpyAV | CCTTC | 1 cut(s) | 479 |
| HpyCH4III | ACNGT | 3 cut(s) | 12, 82, 517 |
| HpyCH4IV | ACGT | 1 cut(s) | 417 |
| HpyCH4V | TGCA | 2 cut(s) | 359, 425 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 41, 380 |
| HpyF3I | CTNAG | 2 cut(s) | 102, 363 |
| HpySE526I | ACGT | 1 cut(s) | 417 |
| Hsp92II | CATG | 1 cut(s) | 410 |
| Ksp22I | TGATCA | 1 cut(s) | 16 |
| Kzo9I | GATC | 3 cut(s) | 16, 163, 265 |
| LmnI | GCTCC | 1 cut(s) | 289 |
| LpnPI | CCDG | 4 cut(s) | 229, 256, 384, 384 |
| Lsp1109I | GCAGC | 3 cut(s) | 53, 343, 409 |
| LweI | GCATC | 3 cut(s) | 191, 368, 467 |
| MaeI | CTAG | 1 cut(s) | 306 |
| MaeII | ACGT | 1 cut(s) | 417 |
| MalI | GATC | 3 cut(s) | 18, 165, 267 |
| MboI | GATC | 3 cut(s) | 16, 163, 265 |
| MboII | GAAGA | 1 cut(s) | 249 |
| MflI | RGATCY | 1 cut(s) | 163 |
| MhlI | GDGCHC | 1 cut(s) | 286 |
| MluCI | AATT | 8 cut(s) | 28, 139, 196, 201, 277, 439, 534, 556 |
| MmeI | TCCRAC | 1 cut(s) | 311 |
| MnlI | CCTC | 3 cut(s) | 97, 154, 339 |
| MseI | TTAA | 2 cut(s) | 506, 533 |
| MspR9I | CCNGG | 1 cut(s) | 244 |
| MvaI | CCWGG | 1 cut(s) | 244 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 41, 380 |
| NdeII | GATC | 3 cut(s) | 16, 163, 265 |
| NlaIII | CATG | 1 cut(s) | 410 |
| PagI | TCATGA | 1 cut(s) | 406 |
| PfeI | GAWTC | 1 cut(s) | 314 |
| PkrI | GCNGC | 3 cut(s) | 43, 358, 424 |
| Psp1406I | AACGTT | 1 cut(s) | 417 |
| Psp6I | CCWGG | 1 cut(s) | 242 |
| PspGI | CCWGG | 1 cut(s) | 242 |
| PstNI | CAGNNNCTG | 1 cut(s) | 377 |
| PsuI | RGATCY | 1 cut(s) | 163 |
| RsaI | GTAC | 1 cut(s) | 178 |
| RsaNI | GTAC | 1 cut(s) | 177 |
| SaqAI | TTAA | 2 cut(s) | 506, 533 |
| SatI | GCNGC | 3 cut(s) | 42, 357, 423 |
| Sau3AI | GATC | 3 cut(s) | 16, 163, 265 |
| ScrFI | CCNGG | 1 cut(s) | 244 |
| SduI | GDGCHC | 1 cut(s) | 286 |
| SetI | ASST | 5 cut(s) | 350, 358, 376, 420, 430 |
| SfaNI | GCATC | 3 cut(s) | 191, 368, 467 |
| SfcI | CTRYAG | 1 cut(s) | 496 |
| Sse9I | AATT | 8 cut(s) | 28, 139, 196, 201, 277, 439, 534, 556 |
| SspMI | CTAG | 1 cut(s) | 306 |
| StyD4I | CCNGG | 1 cut(s) | 242 |
| TaaI | ACNGT | 3 cut(s) | 12, 82, 517 |
| TaiI | ACGT | 1 cut(s) | 420 |
| TaqI | TCGA | 2 cut(s) | 65, 468 |
| TasI | AATT | 8 cut(s) | 28, 139, 196, 201, 277, 439, 534, 556 |
| TfiI | GAWTC | 1 cut(s) | 314 |
| Tru1I | TTAA | 2 cut(s) | 506, 533 |
| Tru9I | TTAA | 2 cut(s) | 506, 533 |
| TscAI | CASTG | 3 cut(s) | 17, 87, 277 |
| TseI | GCWGC | 3 cut(s) | 41, 356, 422 |
| TspDTI | ATGAA | 2 cut(s) | 327, 423 |
| TspGWI | ACGGA | 1 cut(s) | 349 |
| TspRI | CASTG | 3 cut(s) | 17, 87, 277 |
| XapI | RAATTY | 3 cut(s) | 28, 139, 439 |
| XspI | CTAG | 1 cut(s) | 306 |