Belongs to the glycosyl hydrolase 28 family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD01G1068900.v1.1 |
| rosa_chinensis | RchiOBHm_Chr1g0328881 RchiOBHm_Chr2g0103941 RchiOBHm_Chr2g0148771 RchiOBHm_Chr5g0081751 RchiOBHm_Chr6g0251601 RchiOBHm_Chr6g0252891 RchiOBHm_Chr6g0261041 |
| rosa_laevigata | RLG00000009276 |
| rosa_multiflora | Rmu_sc0002607.1_g000054 |
| rosa_roxburghii | Rroxscaffold_3G00226620 Rroxscaffold_3G00261660 Rroxscaffold_6G00387930 Rroxscaffold_7G00214780 |
| rosa_rugosa | Rorug01G0154400.1 Rorug02G0266600.1 Rorug03G0008400 Rorug03G0200100 Rorug05G0519500 Rorug06G0005400.1 Rorug06G0320100 Rorug07G0042900 |
| rosa_samantha | Rh1AG156000 Rh1AG219000 Rh1BG044200 Rh1DG160300 Rh2BG398200 Rh2BG403900 Rh2BG460500 Rh2CG000900 Rh2CG307500 Rh2CG547200 Rh2DG469900 Rh4CG118200 Rh4DG178300 Rh5CG178000 Rh5CG304800 Rh5CG363400 Rh5DG164400 Rh6AG114000 Rh6AG247400 Rh6BG059200 Rh6BG107600 Rh6CG031400 Rh6CG104700 Rh6DG029900 Rh6DG095500 Rh7BG290500 |
| rosa_wichuraiana | Rw1G002350 Rw4G023590 Rw5G005770 Rw6G009740 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 119 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 119 |
| AgsI | TTSAA | 1 cut(s) | 85 |
| AluBI | AGCT | 2 cut(s) | 16, 143 |
| AluI | AGCT | 2 cut(s) | 16, 143 |
| Alw26I | GTCTC | 2 cut(s) | 164, 195 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 143 |
| AoxI | GGCC | 1 cut(s) | 92 |
| ApeKI | GCWGC | 2 cut(s) | 137, 140 |
| AsuHPI | GGTGA | 1 cut(s) | 17 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 142, 175 |
| BbvI | GCAGC | 2 cut(s) | 149, 152 |
| BccI | CCATC | 1 cut(s) | 121 |
| BcoDI | GTCTC | 2 cut(s) | 164, 195 |
| BisI | GCNGC | 2 cut(s) | 138, 141 |
| BlsI | GCNGC | 2 cut(s) | 139, 142 |
| BmsI | GCATC | 2 cut(s) | 46, 124 |
| BpmI | CTGGAG | 1 cut(s) | 139 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 119 |
| Bse1I | ACTGG | 2 cut(s) | 28, 156 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 119 |
| BseMII | CTCAG | 1 cut(s) | 89 |
| BseNI | ACTGG | 2 cut(s) | 28, 156 |
| BseXI | GCAGC | 2 cut(s) | 149, 152 |
| BshFI | GGCC | 1 cut(s) | 94 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 119 |
| BsmAI | GTCTC | 2 cut(s) | 164, 195 |
| BsnI | GGCC | 1 cut(s) | 94 |
| BspANI | GGCC | 1 cut(s) | 94 |
| BspCNI | CTCAG | 1 cut(s) | 88 |
| BsrI | ACTGG | 2 cut(s) | 28, 156 |
| Bst6I | CTCTTC | 1 cut(s) | 124 |
| BstDEI | CTNAG | 1 cut(s) | 75 |
| BstMAI | GTCTC | 2 cut(s) | 164, 195 |
| BstV1I | GCAGC | 2 cut(s) | 149, 152 |
| BsuRI | GGCC | 1 cut(s) | 94 |
| CaiI | CAGNNNCTG | 1 cut(s) | 143 |
| CviAII | CATG | 1 cut(s) | 185 |
| CviJI | RGCY | 5 cut(s) | 16, 22, 94, 107, 143 |
| CviKI_1 | RGCY | 5 cut(s) | 16, 22, 94, 107, 143 |
| DdeI | CTNAG | 1 cut(s) | 75 |
| Eam1104I | CTCTTC | 1 cut(s) | 124 |
| EarI | CTCTTC | 1 cut(s) | 124 |
| FaeI | CATG | 1 cut(s) | 188 |
| FaiI | YATR | 4 cut(s) | 98, 120, 164, 186 |
| FatI | CATG | 1 cut(s) | 184 |
| Fnu4HI | GCNGC | 2 cut(s) | 138, 141 |
| Fsp4HI | GCNGC | 2 cut(s) | 138, 141 |
| GluI | GCNGC | 2 cut(s) | 138, 141 |
| GsuI | CTGGAG | 1 cut(s) | 139 |
| HaeIII | GGCC | 1 cut(s) | 94 |
| Hin1II | CATG | 1 cut(s) | 188 |
| HincII | GTYRAC | 1 cut(s) | 7 |
| HindII | GTYRAC | 1 cut(s) | 7 |
| HindIII | AAGCTT | 1 cut(s) | 14 |
| HphI | GGTGA | 1 cut(s) | 17 |
| Hpy166II | GTNNAC | 1 cut(s) | 7 |
| Hpy188III | TCNNGA | 1 cut(s) | 77 |
| Hpy8I | GTNNAC | 1 cut(s) | 7 |
| HpyAV | CCTTC | 1 cut(s) | 119 |
| HpyCH4V | TGCA | 1 cut(s) | 137 |
| HpyF3I | CTNAG | 1 cut(s) | 75 |
| Hsp92II | CATG | 1 cut(s) | 188 |
| LpnPI | CCDG | 5 cut(s) | 41, 62, 129, 169, 183 |
| Lsp1109I | GCAGC | 2 cut(s) | 149, 152 |
| LweI | GCATC | 2 cut(s) | 46, 124 |
| MaeIII | GTNAC | 1 cut(s) | 193 |
| MboII | GAAGA | 4 cut(s) | 39, 56, 141, 159 |
| MluCI | AATT | 1 cut(s) | 214 |
| MnlI | CCTC | 2 cut(s) | 33, 119 |
| MseI | TTAA | 1 cut(s) | 102 |
| MspA1I | CMGCKG | 1 cut(s) | 143 |
| NlaIII | CATG | 1 cut(s) | 188 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 119 |
| PkrI | GCNGC | 2 cut(s) | 139, 142 |
| PstNI | CAGNNNCTG | 1 cut(s) | 143 |
| PvuII | CAGCTG | 1 cut(s) | 143 |
| SaqAI | TTAA | 1 cut(s) | 102 |
| SatI | GCNGC | 2 cut(s) | 138, 141 |
| SetI | ASST | 2 cut(s) | 18, 145 |
| SfaNI | GCATC | 2 cut(s) | 46, 124 |
| Sse9I | AATT | 1 cut(s) | 214 |
| TasI | AATT | 1 cut(s) | 214 |
| Tru1I | TTAA | 1 cut(s) | 102 |
| Tru9I | TTAA | 1 cut(s) | 102 |
| TseI | GCWGC | 2 cut(s) | 137, 140 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 119 |