Rh2DG645600

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
Physical Location & Seq
Reverse (-)
87232201 .. 87233146
946 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG645600.1

Sequence Viewer

Length: 315 bp
ATGGCTTTTAGAACTCTGCTCTTTCTGTTTGTTGCCATTCTCTTAGTTAGTACAATGATTTCAGCTTATGAATTTGAAGACGAAAAAGTCAAGCAGCCGAAGGTACCAACTTCTGGCGATGTGCAAATTCCACCACTTCCAGAACATGAGGTTCACGAAGACGGGACACATTTCAAAGATTGGCATGAATCATCGGATGATGCTGGCTCGTTTGTTGGGAATGGGCTTGGGAGGAAGTATATGTACCACTCGAATTATGAGGAAGGTGCCAGCGAAGGCGTCTCCGATATATTTCATGACGAACCATTATCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

104

Amino Acids

11.7

Weight (kDa)

4.62

Isoelectric Point (pI)

36.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 86
Acc65I GGTACC 1 cut(s) 103
AccB1I GGYRCC 2 cut(s) 103, 266
AccB7I CCANNNNNTGG 1 cut(s) 113
AcsI RAATTY 2 cut(s) 71, 126
AcyI GRCGYC 1 cut(s) 279
AfaI GTAC 3 cut(s) 52, 105, 245
AfiI CCNNNNNNNGG 1 cut(s) 113
AgsI TTSAA 2 cut(s) 77, 175
AluBI AGCT 1 cut(s) 65
AluI AGCT 1 cut(s) 65
Alw26I GTCTC 1 cut(s) 286
ApeKI GCWGC 1 cut(s) 94
ApoI RAATTY 2 cut(s) 71, 126
Asp718I GGTACC 1 cut(s) 103
BanI GGYRCC 2 cut(s) 103, 266
BarI GAAGNNNNNNTAC 2 cut(s) 227, 259
BbsI GAAGAC 2 cut(s) 84, 165
BbvI GCAGC 1 cut(s) 106
BcoDI GTCTC 1 cut(s) 286
BisI GCNGC 1 cut(s) 95
BlsI GCNGC 1 cut(s) 96
BmiI GGNNCC 2 cut(s) 105, 268
BmsI GCATC 1 cut(s) 190
BpiI GAAGAC 2 cut(s) 84, 165
BsaHI GRCGYC 1 cut(s) 279
Bsc4I CCNNNNNNNGG 1 cut(s) 113
BseGI GGATG 1 cut(s) 202
BseLI CCNNNNNNNGG 1 cut(s) 113
BseXI GCAGC 1 cut(s) 106
BshNI GGYRCC 2 cut(s) 103, 266
BslFI GGGAC 1 cut(s) 178
BslI CCNNNNNNNGG 1 cut(s) 113
BsmAI GTCTC 1 cut(s) 286
BsmBI CGTCTC 1 cut(s) 286
BsmFI GGGAC 1 cut(s) 178
BspHI TCATGA 1 cut(s) 295
BspLI GGNNCC 2 cut(s) 105, 268
BspT107I GGYRCC 2 cut(s) 103, 266
BssNI GRCGYC 1 cut(s) 279
BstACI GRCGYC 1 cut(s) 279
BstC8I GCNNGC 2 cut(s) 205, 271
BstDEI CTNAG 1 cut(s) 43
BstF5I GGATG 1 cut(s) 202
BstMAI GTCTC 1 cut(s) 286
BstV1I GCAGC 1 cut(s) 106
BstV2I GAAGAC 2 cut(s) 84, 165
BtgZI GCGATG 1 cut(s) 132
BtsCI GGATG 1 cut(s) 202
Cac8I GCNNGC 2 cut(s) 205, 271
CciI TCATGA 1 cut(s) 295
CseI GACGC 1 cut(s) 268
Csp6I GTAC 3 cut(s) 51, 104, 244
CviAII CATG 3 cut(s) 146, 185, 296
CviJI RGCY 5 cut(s) 5, 65, 97, 207, 226
CviKI_1 RGCY 5 cut(s) 5, 65, 97, 207, 226
CviQI GTAC 3 cut(s) 51, 104, 244
DdeI CTNAG 1 cut(s) 43
DrdI GACNNNNNNGTC 1 cut(s) 86
DseDI GACNNNNNNGTC 1 cut(s) 86
Esp3I CGTCTC 1 cut(s) 286
FaeI CATG 3 cut(s) 149, 188, 299
FaiI YATR 8 cut(s) 69, 147, 186, 240, 242, 258, 290, 297
FaqI GGGAC 1 cut(s) 178
FatI CATG 3 cut(s) 145, 184, 295
Fnu4HI GCNGC 1 cut(s) 95
FokI GGATG 1 cut(s) 209
Fsp4HI GCNGC 1 cut(s) 95
GluI GCNGC 1 cut(s) 95
HgaI GACGC 1 cut(s) 268
Hin1I GRCGYC 1 cut(s) 279
Hin1II CATG 3 cut(s) 149, 188, 299
HinfI GANTC 1 cut(s) 188
Hpy166II GTNNAC 1 cut(s) 154
Hpy188I TCNGA 2 cut(s) 196, 286
Hpy188III TCNNGA 3 cut(s) 140, 155, 296
Hpy8I GTNNAC 1 cut(s) 154
HpyAV CCTTC 3 cut(s) 94, 257, 269
HpyCH4V TGCA 1 cut(s) 124
HpyF3I CTNAG 1 cut(s) 43
Hsp92I GRCGYC 1 cut(s) 279
Hsp92II CATG 3 cut(s) 149, 188, 299
KpnI GGTACC 1 cut(s) 107
LpnPI CCDG 4 cut(s) 99, 153, 189, 283
Lsp1109I GCAGC 1 cut(s) 106
LweI GCATC 1 cut(s) 190
MboII GAAGA 2 cut(s) 89, 170
MluCI AATT 3 cut(s) 71, 126, 253
MnlI CCTC 3 cut(s) 142, 225, 253
MseI TTAA 1 cut(s) 313
NlaIII CATG 3 cut(s) 149, 188, 299
NlaIV GGNNCC 2 cut(s) 105, 268
PagI TCATGA 1 cut(s) 295
PfeI GAWTC 1 cut(s) 188
PflMI CCANNNNNTGG 1 cut(s) 113
PkrI GCNGC 1 cut(s) 96
PspN4I GGNNCC 2 cut(s) 105, 268
RsaI GTAC 3 cut(s) 52, 105, 245
RsaNI GTAC 3 cut(s) 51, 104, 244
SaqAI TTAA 1 cut(s) 313
SatI GCNGC 1 cut(s) 95
SetI ASST 4 cut(s) 67, 105, 153, 268
SfaNI GCATC 1 cut(s) 190
Sse9I AATT 3 cut(s) 71, 126, 253
TaqI TCGA 1 cut(s) 251
TasI AATT 3 cut(s) 71, 126, 253
TatI WGTACW 1 cut(s) 50
TfiI GAWTC 1 cut(s) 188
Tru1I TTAA 1 cut(s) 313
Tru9I TTAA 1 cut(s) 313
TseI GCWGC 1 cut(s) 94
TspDTI ATGAA 3 cut(s) 84, 201, 284
Van91I CCANNNNNTGG 1 cut(s) 113
XapI RAATTY 2 cut(s) 71, 126
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.