Rh3BG026700

COBW domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
Physical Location & Seq
Forward (+)
1757803 .. 1758003
201 bp
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UTR
Exon/CDS
Intron
Rh3BG026700.1

Sequence Viewer

Length: 201 bp
ATGGTCTTTGCTTCAGGCTACAATCTCGACGAGAATCTGACCTTGGGTATCGAAACCAGTGTTCCGGCGACCATTATCACCGGCTTTCTCGATTCCGGAAAGGTGGGTTTCGATTTCTCTGCTTTTCATTGTGTTTATTCAATCTGGGTTTTGATCACTGAGAAAGGGAAGAGCAGCAGCGAAAAATGCCAAGTCCATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

66

Amino Acids

7.19

Weight (kDa)

5.01

Isoelectric Point (pI)

21.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 95
AgsI TTSAA 1 cut(s) 141
AjuI GAANNNNNNNTTGG 2 cut(s) 26, 58
Aor13HI TCCGGA 1 cut(s) 95
ApeKI GCWGC 2 cut(s) 174, 177
AsuHPI GGTGA 1 cut(s) 70
BbvI GCAGC 2 cut(s) 186, 189
BcgI CGANNNNNNTGC 2 cut(s) 101, 135
BclI TGATCA 1 cut(s) 153
BisI GCNGC 2 cut(s) 175, 178
BlsI GCNGC 2 cut(s) 176, 179
BsaJI CCNNGG 1 cut(s) 42
BsaWI WCCGGW 1 cut(s) 95
Bse118I RCCGGY 1 cut(s) 80
Bse1I ACTGG 1 cut(s) 57
BseAI TCCGGA 1 cut(s) 95
BseDI CCNNGG 1 cut(s) 42
BseMII CTCAG 1 cut(s) 150
BseNI ACTGG 1 cut(s) 57
BseXI GCAGC 2 cut(s) 186, 189
BsiSI CCGG 3 cut(s) 65, 81, 96
Bsp13I TCCGGA 1 cut(s) 95
Bsp143I GATC 1 cut(s) 153
BspCNI CTCAG 1 cut(s) 151
BspEI TCCGGA 1 cut(s) 95
BspQI GCTCTTC 1 cut(s) 164
BsrFI RCCGGY 1 cut(s) 80
BsrI ACTGG 1 cut(s) 57
BssAI RCCGGY 1 cut(s) 80
BssECI CCNNGG 1 cut(s) 42
BssMI GATC 1 cut(s) 153
BssT1I CCWWGG 1 cut(s) 42
Bst6I CTCTTC 1 cut(s) 164
BstDEI CTNAG 1 cut(s) 159
BstKTI GATC 1 cut(s) 156
BstMBI GATC 1 cut(s) 153
BstMWI GCNNNNNNNGC 1 cut(s) 186
BstV1I GCAGC 2 cut(s) 186, 189
BtsIMutI CAGTG 2 cut(s) 64, 156
Cfr10I RCCGGY 1 cut(s) 80
CviJI RGCY 2 cut(s) 18, 84
CviKI_1 RGCY 2 cut(s) 18, 84
DdeI CTNAG 1 cut(s) 159
DpnI GATC 1 cut(s) 155
DpnII GATC 1 cut(s) 153
Eam1104I CTCTTC 1 cut(s) 164
EarI CTCTTC 1 cut(s) 164
Eco130I CCWWGG 1 cut(s) 42
EcoT14I CCWWGG 1 cut(s) 42
ErhI CCWWGG 1 cut(s) 42
FbaI TGATCA 1 cut(s) 153
Fnu4HI GCNGC 2 cut(s) 175, 178
Fsp4HI GCNGC 2 cut(s) 175, 178
GluI GCNGC 2 cut(s) 175, 178
HapII CCGG 3 cut(s) 65, 81, 96
HinfI GANTC 2 cut(s) 34, 92
HpaII CCGG 3 cut(s) 65, 81, 96
HphI GGTGA 1 cut(s) 70
Hpy188I TCNGA 1 cut(s) 39
Hpy188III TCNNGA 3 cut(s) 26, 89, 96
Hpy99I CGWCG 1 cut(s) 32
HpyF10VI GCNNNNNNNGC 1 cut(s) 186
HpyF3I CTNAG 1 cut(s) 159
Kpn2I TCCGGA 1 cut(s) 95
Ksp22I TGATCA 1 cut(s) 153
Kzo9I GATC 1 cut(s) 153
LguI GCTCTTC 1 cut(s) 164
LpnPI CCDG 5 cut(s) 70, 78, 94, 109, 130
Lsp1109I GCAGC 2 cut(s) 186, 189
MalI GATC 1 cut(s) 155
MboI GATC 1 cut(s) 153
MboII GAAGA 1 cut(s) 181
MroI TCCGGA 1 cut(s) 95
MspI CCGG 3 cut(s) 65, 81, 96
MwoI GCNNNNNNNGC 1 cut(s) 186
NdeII GATC 1 cut(s) 153
PciSI GCTCTTC 1 cut(s) 164
PfeI GAWTC 2 cut(s) 34, 92
PkrI GCNGC 2 cut(s) 176, 179
SapI GCTCTTC 1 cut(s) 164
SatI GCNGC 2 cut(s) 175, 178
Sau3AI GATC 1 cut(s) 153
SetI ASST 2 cut(s) 44, 105
StyI CCWWGG 1 cut(s) 42
TaqI TCGA 4 cut(s) 27, 51, 90, 111
TfiI GAWTC 2 cut(s) 34, 92
TscAI CASTG 2 cut(s) 64, 163
TseI GCWGC 2 cut(s) 174, 177
TspDTI ATGAA 1 cut(s) 116
TspRI CASTG 2 cut(s) 64, 163
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.