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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g21121 |
| prunus_persica | Prupe.4G191700_v2.0.a1 |
| pyrus_communis | pycom11g20700 |
| rosa_chinensis | RchiOBHm_Chr5g0036141 RchiOBHm_Chr5g0036171 |
| rosa_laevigata | RLG00000007383 |
| rosa_roxburghii | Rroxscaffold_2G00108780 Rroxscaffold_5G00381270 |
| rosa_rugosa | Rorug04G0455500 Rorug05G0152700 Rorug05G0153300 Rorug05G0262000 Rorug05G0547000 |
| rosa_samantha | Rh1AG184900 Rh1BG274500 Rh2BG110900 Rh2CG113000 Rh2CG408500 Rh4BG024500 Rh4BG176900 Rh4BG190400 Rh4CG169700 Rh5AG247400 Rh5BG394000 Rh5CG278800 Rh5CG279300 Rh5CG281300 Rh5CG472600 Rh5DG256200 Rh5DG256400 Rh5DG463700 Rh5DG491800 Rh7AG097300 Rh7BG099100 Rh7CG120700 Rh7CG270600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 93 |
| AciI | CCGC | 5 cut(s) | 41, 84, 91, 93, 140 |
| AfaI | GTAC | 1 cut(s) | 149 |
| AhlI | ACTAGT | 1 cut(s) | 53 |
| AjnI | CCWGG | 1 cut(s) | 177 |
| AluBI | AGCT | 1 cut(s) | 125 |
| AluI | AGCT | 1 cut(s) | 125 |
| Ama87I | CYCGRG | 1 cut(s) | 152 |
| AoxI | GGCC | 2 cut(s) | 94, 163 |
| AspS9I | GGNCC | 1 cut(s) | 163 |
| AsuHPI | GGTGA | 1 cut(s) | 62 |
| AvaI | CYCGRG | 1 cut(s) | 152 |
| BciT130I | CCWGG | 1 cut(s) | 179 |
| BclI | TGATCA | 1 cut(s) | 67 |
| BcuI | ACTAGT | 1 cut(s) | 53 |
| BfaI | CTAG | 1 cut(s) | 54 |
| BisI | GCNGC | 3 cut(s) | 42, 85, 94 |
| BlsI | GCNGC | 3 cut(s) | 43, 86, 95 |
| Bme1390I | CCNGG | 1 cut(s) | 179 |
| BmeT110I | CYCGRG | 1 cut(s) | 152 |
| BmgT120I | GGNCC | 1 cut(s) | 163 |
| BmrFI | CCNGG | 1 cut(s) | 179 |
| BmrI | ACTGGG | 1 cut(s) | 170 |
| BmuI | ACTGGG | 1 cut(s) | 170 |
| BplI | GAGNNNNNCTC | 1 cut(s) | 38 |
| BsaJI | CCNNGG | 1 cut(s) | 91 |
| Bse1I | ACTGG | 1 cut(s) | 165 |
| BseBI | CCWGG | 1 cut(s) | 179 |
| BseDI | CCNNGG | 1 cut(s) | 91 |
| BseMII | CTCAG | 1 cut(s) | 119 |
| BseNI | ACTGG | 1 cut(s) | 165 |
| BseYI | CCCAGC | 1 cut(s) | 134 |
| Bsh1236I | CGCG | 1 cut(s) | 93 |
| BshFI | GGCC | 2 cut(s) | 96, 165 |
| BsiHKCI | CYCGRG | 1 cut(s) | 152 |
| BsnI | GGCC | 2 cut(s) | 96, 165 |
| BsoBI | CYCGRG | 1 cut(s) | 152 |
| Bsp143I | GATC | 2 cut(s) | 67, 108 |
| BspACI | CCGC | 5 cut(s) | 41, 84, 91, 93, 140 |
| BspANI | GGCC | 2 cut(s) | 96, 165 |
| BspCNI | CTCAG | 1 cut(s) | 118 |
| BspFNI | CGCG | 1 cut(s) | 93 |
| BsrI | ACTGG | 1 cut(s) | 165 |
| BssECI | CCNNGG | 1 cut(s) | 91 |
| BssMI | GATC | 2 cut(s) | 67, 108 |
| Bst2UI | CCWGG | 1 cut(s) | 179 |
| Bst6I | CTCTTC | 1 cut(s) | 104 |
| BstC8I | GCNNGC | 1 cut(s) | 167 |
| BstDEI | CTNAG | 1 cut(s) | 105 |
| BstDSI | CCRYGG | 1 cut(s) | 91 |
| BstEII | GGTNACC | 1 cut(s) | 115 |
| BstFNI | CGCG | 1 cut(s) | 93 |
| BstKTI | GATC | 2 cut(s) | 70, 111 |
| BstMBI | GATC | 2 cut(s) | 67, 108 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 90, 93, 131 |
| BstNI | CCWGG | 1 cut(s) | 179 |
| BstPI | GGTNACC | 1 cut(s) | 115 |
| BstSCI | CCNGG | 1 cut(s) | 177 |
| BstUI | CGCG | 1 cut(s) | 93 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 185 |
| BsuRI | GGCC | 2 cut(s) | 96, 165 |
| BtgI | CCRYGG | 1 cut(s) | 91 |
| Cac8I | GCNNGC | 1 cut(s) | 167 |
| Cfr13I | GGNCC | 1 cut(s) | 163 |
| Cfr42I | CCGCGG | 1 cut(s) | 94 |
| Csp6I | GTAC | 1 cut(s) | 148 |
| CviJI | RGCY | 5 cut(s) | 87, 96, 125, 165, 169 |
| CviKI_1 | RGCY | 5 cut(s) | 87, 96, 125, 165, 169 |
| CviQI | GTAC | 1 cut(s) | 148 |
| DdeI | CTNAG | 1 cut(s) | 105 |
| DpnI | GATC | 2 cut(s) | 69, 110 |
| DpnII | GATC | 2 cut(s) | 67, 108 |
| Eam1104I | CTCTTC | 1 cut(s) | 104 |
| EarI | CTCTTC | 1 cut(s) | 104 |
| Eco88I | CYCGRG | 1 cut(s) | 152 |
| Eco91I | GGTNACC | 1 cut(s) | 115 |
| EcoO65I | GGTNACC | 1 cut(s) | 115 |
| EcoRII | CCWGG | 1 cut(s) | 177 |
| FbaI | TGATCA | 1 cut(s) | 67 |
| Fnu4HI | GCNGC | 3 cut(s) | 42, 85, 94 |
| Fsp4HI | GCNGC | 3 cut(s) | 42, 85, 94 |
| FspBI | CTAG | 1 cut(s) | 54 |
| GluI | GCNGC | 3 cut(s) | 42, 85, 94 |
| GsaI | CCCAGC | 1 cut(s) | 138 |
| HaeIII | GGCC | 2 cut(s) | 96, 165 |
| HincII | GTYRAC | 1 cut(s) | 59 |
| HindII | GTYRAC | 1 cut(s) | 59 |
| HindIII | AAGCTT | 1 cut(s) | 123 |
| HinfI | GANTC | 2 cut(s) | 5, 35 |
| HphI | GGTGA | 1 cut(s) | 62 |
| Hpy166II | GTNNAC | 1 cut(s) | 59 |
| Hpy188I | TCNGA | 1 cut(s) | 108 |
| Hpy8I | GTNNAC | 1 cut(s) | 59 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 90, 93, 131 |
| HpyF3I | CTNAG | 1 cut(s) | 105 |
| Ksp22I | TGATCA | 1 cut(s) | 67 |
| KspI | CCGCGG | 1 cut(s) | 94 |
| Kzo9I | GATC | 2 cut(s) | 67, 108 |
| LpnPI | CCDG | 8 cut(s) | 25, 66, 120, 146, 164, 179, 183, 191 |
| MaeI | CTAG | 1 cut(s) | 54 |
| MaeIII | GTNAC | 2 cut(s) | 115, 194 |
| MalI | GATC | 2 cut(s) | 69, 110 |
| MboI | GATC | 2 cut(s) | 67, 108 |
| MboII | GAAGA | 1 cut(s) | 91 |
| MnlI | CCTC | 4 cut(s) | 8, 83, 106, 107 |
| MspA1I | CMGCKG | 1 cut(s) | 93 |
| MspR9I | CCNGG | 1 cut(s) | 179 |
| MvaI | CCWGG | 1 cut(s) | 179 |
| MvnI | CGCG | 1 cut(s) | 93 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 90, 93, 131 |
| NdeII | GATC | 2 cut(s) | 67, 108 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 117 |
| PfeI | GAWTC | 2 cut(s) | 5, 35 |
| PkrI | GCNGC | 3 cut(s) | 43, 86, 95 |
| Psp6I | CCWGG | 1 cut(s) | 177 |
| PspEI | GGTNACC | 1 cut(s) | 115 |
| PspFI | CCCAGC | 1 cut(s) | 134 |
| PspGI | CCWGG | 1 cut(s) | 177 |
| PspPI | GGNCC | 1 cut(s) | 163 |
| RsaI | GTAC | 1 cut(s) | 149 |
| RsaNI | GTAC | 1 cut(s) | 148 |
| SacII | CCGCGG | 1 cut(s) | 94 |
| SatI | GCNGC | 3 cut(s) | 42, 85, 94 |
| Sau3AI | GATC | 2 cut(s) | 67, 108 |
| Sau96I | GGNCC | 1 cut(s) | 163 |
| ScrFI | CCNGG | 1 cut(s) | 179 |
| SetI | ASST | 4 cut(s) | 75, 117, 127, 183 |
| Sfr303I | CCGCGG | 1 cut(s) | 94 |
| SgrBI | CCGCGG | 1 cut(s) | 94 |
| SpeI | ACTAGT | 1 cut(s) | 53 |
| SsiI | CCGC | 5 cut(s) | 41, 84, 91, 93, 140 |
| SspMI | CTAG | 1 cut(s) | 54 |
| StyD4I | CCNGG | 1 cut(s) | 177 |
| TaqI | TCGA | 1 cut(s) | 111 |
| TauI | GCSGC | 3 cut(s) | 44, 87, 96 |
| TfiI | GAWTC | 2 cut(s) | 5, 35 |
| XspI | CTAG | 1 cut(s) | 54 |