No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g21121 |
| prunus_persica | Prupe.4G191700_v2.0.a1 |
| pyrus_communis | pycom11g20700 |
| rosa_chinensis | RchiOBHm_Chr5g0036141 RchiOBHm_Chr5g0036171 |
| rosa_laevigata | RLG00000007383 |
| rosa_roxburghii | Rroxscaffold_2G00108780 Rroxscaffold_5G00381270 |
| rosa_rugosa | Rorug04G0455500 Rorug05G0152700 Rorug05G0153300 Rorug05G0262000 Rorug05G0547000 |
| rosa_samantha | Rh1AG184900 Rh1BG274500 Rh2BG110900 Rh2CG113000 Rh2CG408500 Rh4BG024500 Rh4BG176900 Rh4BG190400 Rh4CG169700 Rh5AG247400 Rh5BG394000 Rh5CG278800 Rh5CG279300 Rh5CG281300 Rh5CG472600 Rh5DG256200 Rh5DG256400 Rh5DG463700 Rh5DG491800 Rh7AG097300 Rh7BG099100 Rh7CG120700 Rh7CG270600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 23, 45 |
| AgsI | TTSAA | 1 cut(s) | 10 |
| Alw21I | GWGCWC | 1 cut(s) | 192 |
| Alw44I | GTGCAC | 1 cut(s) | 188 |
| AoxI | GGCC | 1 cut(s) | 84 |
| ApaLI | GTGCAC | 1 cut(s) | 188 |
| ApeKI | GCWGC | 1 cut(s) | 47 |
| AspS9I | GGNCC | 1 cut(s) | 206 |
| AsuHPI | GGTGA | 1 cut(s) | 116 |
| AvaII | GGWCC | 1 cut(s) | 206 |
| BaeGI | GKGCMC | 1 cut(s) | 192 |
| Bbv12I | GWGCWC | 1 cut(s) | 192 |
| BbvI | GCAGC | 1 cut(s) | 59 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 36, 39, 70, 73 |
| BisI | GCNGC | 3 cut(s) | 23, 45, 48 |
| BlsI | GCNGC | 3 cut(s) | 24, 46, 49 |
| Bme18I | GGWCC | 1 cut(s) | 206 |
| BmgT120I | GGNCC | 1 cut(s) | 206 |
| BmiI | GGNNCC | 1 cut(s) | 207 |
| BmsI | GCATC | 1 cut(s) | 9 |
| Bse1I | ACTGG | 1 cut(s) | 76 |
| BseNI | ACTGG | 1 cut(s) | 76 |
| BseSI | GKGCMC | 1 cut(s) | 192 |
| BseXI | GCAGC | 1 cut(s) | 59 |
| BseYI | CCCAGC | 1 cut(s) | 201 |
| BshFI | GGCC | 1 cut(s) | 86 |
| BsiHKAI | GWGCWC | 1 cut(s) | 192 |
| BsnI | GGCC | 1 cut(s) | 86 |
| Bsp1286I | GDGCHC | 1 cut(s) | 192 |
| BspACI | CCGC | 2 cut(s) | 23, 45 |
| BspANI | GGCC | 1 cut(s) | 86 |
| BspLI | GGNNCC | 1 cut(s) | 207 |
| BsrI | ACTGG | 1 cut(s) | 76 |
| Bst4CI | ACNGT | 1 cut(s) | 145 |
| BstSLI | GKGCMC | 1 cut(s) | 192 |
| BstV1I | GCAGC | 1 cut(s) | 59 |
| BsuRI | GGCC | 1 cut(s) | 86 |
| Cfr13I | GGNCC | 1 cut(s) | 206 |
| CviJI | RGCY | 3 cut(s) | 86, 130, 176 |
| CviKI_1 | RGCY | 3 cut(s) | 86, 130, 176 |
| Eco47I | GGWCC | 1 cut(s) | 206 |
| FaiI | YATR | 1 cut(s) | 104 |
| Fnu4HI | GCNGC | 3 cut(s) | 23, 45, 48 |
| Fsp4HI | GCNGC | 3 cut(s) | 23, 45, 48 |
| GluI | GCNGC | 3 cut(s) | 23, 45, 48 |
| GsaI | CCCAGC | 1 cut(s) | 205 |
| HaeIII | GGCC | 1 cut(s) | 86 |
| HinfI | GANTC | 2 cut(s) | 53, 121 |
| HphI | GGTGA | 1 cut(s) | 116 |
| Hpy166II | GTNNAC | 1 cut(s) | 190 |
| Hpy188I | TCNGA | 1 cut(s) | 67 |
| Hpy8I | GTNNAC | 1 cut(s) | 190 |
| Hpy99I | CGWCG | 1 cut(s) | 61 |
| HpyAV | CCTTC | 1 cut(s) | 166 |
| HpyCH4III | ACNGT | 1 cut(s) | 145 |
| HpyCH4V | TGCA | 1 cut(s) | 190 |
| LpnPI | CCDG | 5 cut(s) | 57, 68, 140, 170, 187 |
| Lsp1109I | GCAGC | 1 cut(s) | 59 |
| LweI | GCATC | 1 cut(s) | 9 |
| MboII | GAAGA | 2 cut(s) | 171, 174 |
| MhlI | GDGCHC | 1 cut(s) | 192 |
| MluCI | AATT | 2 cut(s) | 5, 211 |
| MlyI | GAGTC | 1 cut(s) | 62 |
| MseI | TTAA | 1 cut(s) | 214 |
| NlaIV | GGNNCC | 1 cut(s) | 207 |
| PfeI | GAWTC | 1 cut(s) | 121 |
| PkrI | GCNGC | 3 cut(s) | 24, 46, 49 |
| PleI | GAGTC | 1 cut(s) | 61 |
| PpsI | GAGTC | 1 cut(s) | 61 |
| PspFI | CCCAGC | 1 cut(s) | 201 |
| PspN4I | GGNNCC | 1 cut(s) | 207 |
| PspPI | GGNCC | 1 cut(s) | 206 |
| SaqAI | TTAA | 1 cut(s) | 214 |
| SatI | GCNGC | 3 cut(s) | 23, 45, 48 |
| Sau96I | GGNCC | 1 cut(s) | 206 |
| SchI | GAGTC | 1 cut(s) | 62 |
| SduI | GDGCHC | 1 cut(s) | 192 |
| SfaNI | GCATC | 1 cut(s) | 9 |
| SgeI | CNNG | 5 cut(s) | 84, 95, 139, 197, 205 |
| SinI | GGWCC | 1 cut(s) | 206 |
| Sse9I | AATT | 2 cut(s) | 5, 211 |
| SsiI | CCGC | 2 cut(s) | 23, 45 |
| TaaI | ACNGT | 1 cut(s) | 145 |
| TaqI | TCGA | 1 cut(s) | 14 |
| TasI | AATT | 2 cut(s) | 5, 211 |
| TauI | GCSGC | 2 cut(s) | 25, 47 |
| TfiI | GAWTC | 1 cut(s) | 121 |
| Tru1I | TTAA | 1 cut(s) | 214 |
| Tru9I | TTAA | 1 cut(s) | 214 |
| TseI | GCWGC | 1 cut(s) | 47 |
| TspDTI | ATGAA | 1 cut(s) | 47 |
| VneI | GTGCAC | 1 cut(s) | 188 |
| VpaK11BI | GGWCC | 1 cut(s) | 206 |