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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g21121 |
| prunus_persica | Prupe.4G191700_v2.0.a1 |
| pyrus_communis | pycom11g20700 |
| rosa_chinensis | RchiOBHm_Chr5g0036141 RchiOBHm_Chr5g0036171 |
| rosa_laevigata | RLG00000007383 |
| rosa_roxburghii | Rroxscaffold_2G00108780 Rroxscaffold_5G00381270 |
| rosa_rugosa | Rorug04G0455500 Rorug05G0152700 Rorug05G0153300 Rorug05G0262000 Rorug05G0547000 |
| rosa_samantha | Rh1AG184900 Rh1BG274500 Rh2BG110900 Rh2CG113000 Rh2CG408500 Rh4BG024500 Rh4BG176900 Rh4BG190400 Rh4CG169700 Rh5AG247400 Rh5BG394000 Rh5CG278800 Rh5CG279300 Rh5CG281300 Rh5CG472600 Rh5DG256200 Rh5DG256400 Rh5DG463700 Rh5DG491800 Rh7AG097300 Rh7BG099100 Rh7CG120700 Rh7CG270600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 140 |
| AcuI | CTGAAG | 1 cut(s) | 53 |
| AfaI | GTAC | 1 cut(s) | 149 |
| AjnI | CCWGG | 1 cut(s) | 177 |
| AluBI | AGCT | 2 cut(s) | 125, 134 |
| AluI | AGCT | 2 cut(s) | 125, 134 |
| Alw21I | GWGCWC | 1 cut(s) | 127 |
| Ama87I | CYCGRG | 1 cut(s) | 152 |
| AoxI | GGCC | 1 cut(s) | 163 |
| AspS9I | GGNCC | 1 cut(s) | 163 |
| AvaI | CYCGRG | 1 cut(s) | 152 |
| BanII | GRGCYC | 1 cut(s) | 127 |
| BbsI | GAAGAC | 3 cut(s) | 14, 23, 32 |
| Bbv12I | GWGCWC | 1 cut(s) | 127 |
| BceAI | ACGGC | 1 cut(s) | 72 |
| BciT130I | CCWGG | 1 cut(s) | 179 |
| Bme1390I | CCNGG | 1 cut(s) | 179 |
| BmeT110I | CYCGRG | 1 cut(s) | 152 |
| BmgT120I | GGNCC | 1 cut(s) | 163 |
| BmrFI | CCNGG | 1 cut(s) | 179 |
| BmrI | ACTGGG | 1 cut(s) | 170 |
| BmuI | ACTGGG | 1 cut(s) | 170 |
| BpiI | GAAGAC | 3 cut(s) | 14, 23, 32 |
| BsaWI | WCCGGW | 1 cut(s) | 119 |
| Bse1I | ACTGG | 1 cut(s) | 165 |
| BseBI | CCWGG | 1 cut(s) | 179 |
| BseGI | GGATG | 1 cut(s) | 96 |
| BseMII | CTCAG | 2 cut(s) | 119, 125 |
| BseNI | ACTGG | 1 cut(s) | 165 |
| BseYI | CCCAGC | 1 cut(s) | 134 |
| BshFI | GGCC | 1 cut(s) | 165 |
| BsiHKAI | GWGCWC | 1 cut(s) | 127 |
| BsiHKCI | CYCGRG | 1 cut(s) | 152 |
| BsiSI | CCGG | 1 cut(s) | 120 |
| BsnI | GGCC | 1 cut(s) | 165 |
| BsoBI | CYCGRG | 1 cut(s) | 152 |
| Bsp1286I | GDGCHC | 1 cut(s) | 127 |
| BspACI | CCGC | 1 cut(s) | 140 |
| BspANI | GGCC | 1 cut(s) | 165 |
| BspCNI | CTCAG | 2 cut(s) | 120, 124 |
| BsrI | ACTGG | 1 cut(s) | 165 |
| Bst2UI | CCWGG | 1 cut(s) | 179 |
| BstDEI | CTNAG | 2 cut(s) | 111, 128 |
| BstEII | GGTNACC | 1 cut(s) | 115 |
| BstF5I | GGATG | 1 cut(s) | 96 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 131 |
| BstNI | CCWGG | 1 cut(s) | 179 |
| BstPI | GGTNACC | 1 cut(s) | 115 |
| BstSCI | CCNGG | 1 cut(s) | 177 |
| BstV2I | GAAGAC | 3 cut(s) | 14, 23, 32 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 185 |
| BsuRI | GGCC | 1 cut(s) | 165 |
| BtgZI | GCGATG | 1 cut(s) | 56 |
| BtsCI | GGATG | 1 cut(s) | 96 |
| Cfr13I | GGNCC | 1 cut(s) | 163 |
| CseI | GACGC | 1 cut(s) | 37 |
| Csp6I | GTAC | 1 cut(s) | 148 |
| CviJI | RGCY | 3 cut(s) | 125, 134, 165 |
| CviKI_1 | RGCY | 3 cut(s) | 125, 134, 165 |
| CviQI | GTAC | 1 cut(s) | 148 |
| DdeI | CTNAG | 2 cut(s) | 111, 128 |
| Ecl136II | GAGCTC | 1 cut(s) | 125 |
| Eco24I | GRGCYC | 1 cut(s) | 127 |
| Eco53kI | GAGCTC | 1 cut(s) | 125 |
| Eco57I | CTGAAG | 1 cut(s) | 53 |
| Eco88I | CYCGRG | 1 cut(s) | 152 |
| Eco91I | GGTNACC | 1 cut(s) | 115 |
| EcoICRI | GAGCTC | 1 cut(s) | 125 |
| EcoO65I | GGTNACC | 1 cut(s) | 115 |
| EcoRII | CCWGG | 1 cut(s) | 177 |
| EcoT38I | GRGCYC | 1 cut(s) | 127 |
| FokI | GGATG | 1 cut(s) | 103 |
| FriOI | GRGCYC | 1 cut(s) | 127 |
| GsaI | CCCAGC | 1 cut(s) | 138 |
| HaeIII | GGCC | 1 cut(s) | 165 |
| HapII | CCGG | 1 cut(s) | 120 |
| HgaI | GACGC | 1 cut(s) | 37 |
| HinfI | GANTC | 1 cut(s) | 94 |
| HpaII | CCGG | 1 cut(s) | 120 |
| Hpy188I | TCNGA | 2 cut(s) | 99, 129 |
| Hpy99I | CGWCG | 2 cut(s) | 55, 58 |
| HpyAV | CCTTC | 1 cut(s) | 28 |
| HpyCH4IV | ACGT | 1 cut(s) | 105 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 131 |
| HpyF3I | CTNAG | 2 cut(s) | 111, 128 |
| HpySE526I | ACGT | 1 cut(s) | 105 |
| LmnI | GCTCC | 1 cut(s) | 122 |
| LpnPI | CCDG | 7 cut(s) | 98, 120, 133, 146, 164, 183, 191 |
| MaeII | ACGT | 1 cut(s) | 105 |
| MaeIII | GTNAC | 2 cut(s) | 115, 194 |
| MboII | GAAGA | 3 cut(s) | 19, 28, 37 |
| MhlI | GDGCHC | 1 cut(s) | 127 |
| MlyI | GAGTC | 1 cut(s) | 103 |
| MmeI | TCCRAC | 1 cut(s) | 77 |
| MnlI | CCTC | 4 cut(s) | 15, 31, 69, 81 |
| MspI | CCGG | 1 cut(s) | 120 |
| MspR9I | CCNGG | 1 cut(s) | 179 |
| MvaI | CCWGG | 1 cut(s) | 179 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 131 |
| PleI | GAGTC | 1 cut(s) | 102 |
| PpsI | GAGTC | 1 cut(s) | 102 |
| Psp124BI | GAGCTC | 1 cut(s) | 127 |
| Psp6I | CCWGG | 1 cut(s) | 177 |
| PspEI | GGTNACC | 1 cut(s) | 115 |
| PspFI | CCCAGC | 1 cut(s) | 134 |
| PspGI | CCWGG | 1 cut(s) | 177 |
| PspPI | GGNCC | 1 cut(s) | 163 |
| RsaI | GTAC | 1 cut(s) | 149 |
| RsaNI | GTAC | 1 cut(s) | 148 |
| SacI | GAGCTC | 1 cut(s) | 127 |
| Sau96I | GGNCC | 1 cut(s) | 163 |
| SchI | GAGTC | 1 cut(s) | 103 |
| ScrFI | CCNGG | 1 cut(s) | 179 |
| SduI | GDGCHC | 1 cut(s) | 127 |
| SetI | ASST | 6 cut(s) | 108, 117, 127, 136, 172, 183 |
| SsiI | CCGC | 1 cut(s) | 140 |
| SstI | GAGCTC | 1 cut(s) | 127 |
| StyD4I | CCNGG | 1 cut(s) | 177 |
| TaiI | ACGT | 1 cut(s) | 108 |