Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0001754

Physical Location & Seq

Genomic Coordinates Reverse (-)

68405727 .. 68409080

Gene Structure 3354 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG395200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1728 bp

ATGGAAAACAGAGTCATTAGCCTCCTGGTCATTGCGCTCATTATGTGCTATGGATTGTCAACGGCCGTTGGATTTTATCGAGATGAAAACTGGGGGAAGCAGAGAGAAGACCCCGATCAAGAGCAGGAAGAGCAAGAGCAAGAAGCGATGATGGGAGACGAGGATTGGTTCTTGTTGCAGAACTCAAAGCAGGTGGTGAAAACTCGAGCTGGTGAAATGAGAGTGGTGAAAAGCGTAGGTGGGAGGATTGTTGATAAGCCAATGCATATTGGGTTTATTACAATGGAGCCCAAGTCCCTCTTTGTACCTCAGTACATGGACTCCAGCTTGATCCTCTTCGTCCATTCTGGGGAAGCAAAGGTAGGGCTGATATACAGAGATGAACTGGGAGAGAGGAGATTGAGGGCTGGGGATGTGTACAGAATTCCAGCTGGTTCGCCGTTTTATTTGGTGAATACAGGGGAGGGTCAGAGACTTCACATCATCTGTAGCGTTGATACATCTGAGAGTTTGGGAATGGGTACTTTGCAGTCTTTCTACATTGGTGGAGGATATAACCCAGCATCTGTACTTGCTGGATTTGACCAGGAAATACTCGAAAGTGCATTCAATGTTACATCATCAGAACTAAGTGATTTCTTGTCAAGGCAACAAGATGGTCCAATTGTATATGTGACTGATTCACCTCATCCACCAAGCCTTTGGTCAAGATTCCTAGAGCTGAAAGAGCATGACAGACTCCAAAATATGAAGAGAATGGTGGGATTCACAAAAGAACCTGATCACCAAGAAGAAGACCAATCATTAGCATGGTCATGGAGGAAGCTTCTCAACTCTGTGTTCGGATCAAATGACAAGAGAAGAGACGATCCCGATGCTTACAAGGGAAAAGGAAAATCTCATGATGCTTACAACCTCTTCAAGAGATCTGCAGATTTCAAAAACGACTATGGCTGGAGCAAGGCACTTGACGAATCTGATTACTCGCCACTAAAAGACTCTGGCGTTGGTGTCTACCTTGTCAACCTTTCTGCAGGGTCAATGATGGCACCACATGTGAACCCAATAGCAACAGAGTATGGGATTGTATTGAGAGGTTCTGGCACAATACAGATTGTATTTCCAAACGGAACCTCGGCAATGAATACTAAAGTTCAAGAAGGAGATGTGTTTTGGGTCCCAAGGTACTTCCCATTCTGTCAAATTGCATCAAGAACTGGTCCTCTTGAGTTCTTTGGATTCACCACCTCGGCACGCAAGAACAGGCCACAGTTCTTGGTTGGTGCTAGCTCTGTTCTTAGGGAGCTCAGAGGACCTGAGCTTGCAGCTGCTTTTGGTGTGAATGAGGATCGGTTGAGTCGCATTGTTCATGCTCAGCGTGAGTCTGTGATCTTGCCTTCGGTGCAAGCAGCTCCTCCTTACAAGGGGGAGGAGAGAGAGTCAACCCCGGAGGAGGAGACAGGGAAGCAAACCCCATACAAGGAGGACGAGAGGAGGCAGGAAGACAGGAGGAGGCGGGAAGATAAGAAGAGGCGGGAAGACGAGAGGGAGCAATCAGCTGAGGAAGATGAGAGAAGGCAACCCCCATTCAAGGAAGATGAGAGGCAGCAGTCGTCACAGGAGAAGCAGAGGAGGCAACCTCCATACGGGGAAGGGGATGTGATGTTTCAGAGGCTCCCAAAGGTGATCAAGAGTTTCGGGAATGAGATGGTTATGGGTTTTGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005911 GO:0006950 GO:0006952 GO:0008150 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0030054 GO:0043207 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0098542

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cupin_1

Protein Analysis

575

Amino Acids

65.49

Weight (kDa)

5.41

Isoelectric Point (pI)

55.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cupin_1	PF00190	91 - 209	4.1e-09	Cupin
Cupin_1	PF00190	304 - 449	1e-32	Cupin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001754)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G28490
fragaria_vesca	FvH4_3g33180 FvH4_3g33190 FvH4_3g33240
malus_domestica	MD03G1105100.v1.1 MD11G1130400.v1.1
prunus_persica	Prupe.6G095000_v2.0.a1
pyrus_communis	pycom11g10790 pycom11g10800
rosa_chinensis	RchiOBHm_Chr5g0060491 RchiOBHm_Chr5g0060501 RchiOBHm_Chr5g0060531 RchiOBHm_Chr5g0060591
rosa_laevigata	RLG00000035368 RLG00000035369 RLG00000035372 RLG00000035373
rosa_multiflora	Rmu_co8403353.1_g000001 Rmu_sc0001650.1_g000002 Rmu_sc0001650.1_g000006 Rmu_sc0001650.1_g000014 Rmu_sc0001650.1_g000017 Rmu_sc0007864.1_g000004 Rmu_sc0007864.1_g000006 Rmu_sc0034083.1_g000001
rosa_roxburghii	Rroxscaffold_1G00020220 Rroxscaffold_1G00020240 Rroxscaffold_1G00020280 Rroxscaffold_1G00020290
rosa_rugosa	Rorug05G0330900 Rorug05G0330900 Rorug05G0331000
rosa_samantha	Rh5AG395200 Rh5AG395300 Rh5AG395400 Rh5BG407600 Rh5BG407700 Rh5CG431300 Rh5CG431400 Rh5CG431700 Rh5CG432100 Rh5DG422400 Rh5DG422500 Rh5DG422600
rosa_wichuraiana	Rw5G037170 Rw5G037180 Rw5G037190 Rw5G037200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	181
Acc36I	ACCTGC	1 cut(s)	181
AccB1I	GGYRCC	1 cut(s)	1048
AccI	GTMKAC	1 cut(s)	1014
AciI	CCGC	2 cut(s)	1516, 1534
AclWI	GGATC	4 cut(s)	325, 853, 863, 1356
AcoI	YGGCCR	1 cut(s)	63
AcsI	RAATTY	1 cut(s)	423
AfaI	GTAC	6 cut(s)	306, 314, 419, 523, 570, 1187
AfiI	CCNNNNNNNGG	6 cut(s)	349, 1424, 1453, 1480, 1591, 1646
AflIII	ACRYGT	1 cut(s)	1054
AgsI	TTSAA	5 cut(s)	610, 922, 940, 1157, 1591
AjnI	CCWGG	2 cut(s)	24, 585
Alw21I	GWGCWC	1 cut(s)	1308
Alw26I	GTCTC	4 cut(s)	150, 466, 858, 1451
AlwI	GGATC	4 cut(s)	325, 853, 863, 1356
AlwNI	CAGNNNCTG	1 cut(s)	566
Ama87I	CYCGRG	1 cut(s)	204
AoxI	GGCC	2 cut(s)	63, 1265
ApeKI	GCWGC	4 cut(s)	1325, 1328, 1409, 1606
ApoI	RAATTY	1 cut(s)	423
AspLEI	GCGC	1 cut(s)	37
AspS9I	GGNCC	4 cut(s)	659, 1177, 1220, 1313
AsuC2I	CCSGG	1 cut(s)	1448
AsuHPI	GGTGA	8 cut(s)	208, 224, 238, 463, 675, 776, 1234, 1696
AsuNHI	GCTAGC	1 cut(s)	1286
AvaI	CYCGRG	1 cut(s)	204
AvaII	GGWCC	4 cut(s)	659, 1177, 1220, 1313
BanI	GGYRCC	1 cut(s)	1048
BanII	GRGCYC	2 cut(s)	291, 1308
BbsI	GAAGAC	4 cut(s)	114, 801, 1509, 1545
Bbv12I	GWGCWC	1 cut(s)	1308
BbvCI	CCTCAGC	1 cut(s)	1560
BbvI	GCAGC	4 cut(s)	1315, 1337, 1421, 1618
BccI	CCATC	4 cut(s)	145, 650, 1039, 1702
BceAI	ACGGC	3 cut(s)	50, 78, 424
BcgI	CGANNNNNNTGC	2 cut(s)	857, 891
BciT130I	CCWGG	2 cut(s)	26, 587
BclI	TGATCA	2 cut(s)	781, 1686
BcnI	CCSGG	1 cut(s)	1448
BcoDI	GTCTC	4 cut(s)	150, 466, 858, 1451
BfaI	CTAG	2 cut(s)	716, 1287
BfmI	CTRYAG	3 cut(s)	487, 930, 1032
BfuAI	ACCTGC	1 cut(s)	181
BglII	AGATCT	1 cut(s)	926
BisI	GCNGC	4 cut(s)	1326, 1329, 1410, 1607
BlpI	GCTNAGC	1 cut(s)	1374
BlsI	GCNGC	4 cut(s)	1327, 1330, 1411, 1608
Bme1390I	CCNGG	3 cut(s)	26, 587, 1448
Bme18I	GGWCC	4 cut(s)	659, 1177, 1220, 1313
BmeT110I	CYCGRG	1 cut(s)	204
BmgT120I	GGNCC	4 cut(s)	659, 1177, 1220, 1313
BmiI	GGNNCC	6 cut(s)	288, 1050, 1132, 1178, 1179, 1676
BmrFI	CCNGG	3 cut(s)	26, 587, 1448
BmrI	ACTGGG	2 cut(s)	100, 395
BmsI	GCATC	4 cut(s)	572, 865, 895, 1217
BmtI	GCTAGC	1 cut(s)	1290
BmuI	ACTGGG	2 cut(s)	100, 395
BpiI	GAAGAC	4 cut(s)	114, 801, 1509, 1545
BplI	GAGNNNNNCTC	2 cut(s)	1624, 1656
BpmI	CTGGAG	2 cut(s)	307, 976
Bpu10I	CCTNAGC	2 cut(s)	1317, 1560
Bpu1102I	GCTNAGC	1 cut(s)	1374
BpuEI	CTTGAG	1 cut(s)	1247
BpuMI	CCSGG	1 cut(s)	1448
BsaJI	CCNNGG	4 cut(s)	1134, 1181, 1248, 1446
BsaXI	ACNNNNNCTCC	6 cut(s)	278, 305, 308, 335, 1424, 1454
Bsc4I	CCNNNNNNNGG	6 cut(s)	349, 1424, 1453, 1480, 1591, 1646
Bse1I	ACTGG	3 cut(s)	95, 390, 1222
Bse3DI	GCAATG	2 cut(s)	30, 1146
BseBI	CCWGG	2 cut(s)	26, 587
BseDI	CCNNGG	4 cut(s)	1134, 1181, 1248, 1446
BseGI	GGATG	3 cut(s)	418, 688, 1663
BseLI	CCNNNNNNNGG	6 cut(s)	349, 1424, 1453, 1480, 1591, 1646
BseMI	GCAATG	2 cut(s)	30, 1146
BseMII	CTCAG	6 cut(s)	323, 495, 1308, 1321, 1388, 1551
BseNI	ACTGG	3 cut(s)	95, 390, 1222
BseRI	GAGGAG	8 cut(s)	409, 1404, 1445, 1466, 1469, 1507, 1525, 1645
BseX3I	CGGCCG	1 cut(s)	63
BseXI	GCAGC	4 cut(s)	1315, 1337, 1421, 1618
BseYI	CCCAGC	2 cut(s)	407, 559
Bsh1285I	CGRYCG	1 cut(s)	66
BshFI	GGCC	2 cut(s)	65, 1267
BshNI	GGYRCC	1 cut(s)	1048
BsiEI	CGRYCG	1 cut(s)	66
BsiHKAI	GWGCWC	1 cut(s)	1308
BsiHKCI	CYCGRG	1 cut(s)	204
BsiSI	CCGG	1 cut(s)	1448
BslFI	GGGAC	2 cut(s)	280, 1163
BslI	CCNNNNNNNGG	6 cut(s)	349, 1424, 1453, 1480, 1591, 1646
BsmAI	GTCTC	4 cut(s)	150, 466, 858, 1451
BsmBI	CGTCTC	2 cut(s)	150, 858
BsmFI	GGGAC	2 cut(s)	280, 1163
BsmI	GAATGC	1 cut(s)	605
BsnI	GGCC	2 cut(s)	65, 1267
BsoBI	CYCGRG	1 cut(s)	204
Bsp1286I	GDGCHC	2 cut(s)	291, 1308
Bsp1407I	TGTACA	1 cut(s)	417
Bsp143I	GATC	9 cut(s)	115, 330, 781, 845, 868, 926, 1348, 1389, 1686
Bsp1720I	GCTNAGC	1 cut(s)	1374
BspACI	CCGC	2 cut(s)	1516, 1534
BspANI	GGCC	2 cut(s)	65, 1267
BspCNI	CTCAG	6 cut(s)	322, 496, 1309, 1320, 1387, 1552
BspHI	TCATGA	1 cut(s)	901
BspLI	GGNNCC	6 cut(s)	288, 1050, 1132, 1178, 1179, 1676
BspMAI	CTGCAG	2 cut(s)	934, 1036
BspMI	ACCTGC	1 cut(s)	181
BspOI	GCTAGC	1 cut(s)	1290
BspPI	GGATC	4 cut(s)	325, 853, 863, 1356
BspQI	GCTCTTC	1 cut(s)	123
BspT107I	GGYRCC	1 cut(s)	1048
BsrDI	GCAATG	2 cut(s)	30, 1146
BsrGI	TGTACA	1 cut(s)	417
BsrI	ACTGG	3 cut(s)	95, 390, 1222
BssECI	CCNNGG	4 cut(s)	1134, 1181, 1248, 1446
BssMI	GATC	9 cut(s)	115, 330, 781, 845, 868, 926, 1348, 1389, 1686
BssT1I	CCWWGG	1 cut(s)	1181
Bst2UI	CCWGG	2 cut(s)	26, 587
Bst4CI	ACNGT	1 cut(s)	1272
Bst6I	CTCTTC	6 cut(s)	123, 341, 746, 856, 923, 1523
BstAUI	TGTACA	1 cut(s)	417
BstC8I	GCNNGC	4 cut(s)	1255, 1288, 1323, 1407
BstDEI	CTNAG	8 cut(s)	309, 504, 629, 1298, 1307, 1317, 1374, 1560
BstF5I	GGATG	3 cut(s)	418, 688, 1663
BstHHI	GCGC	1 cut(s)	37
BstKTI	GATC	9 cut(s)	118, 333, 784, 848, 871, 929, 1351, 1392, 1689
BstMAI	GTCTC	4 cut(s)	150, 466, 858, 1451
BstMBI	GATC	9 cut(s)	115, 330, 781, 845, 868, 926, 1348, 1389, 1686
BstMCI	CGRYCG	1 cut(s)	66
BstMWI	GCNNNNNNNGC	4 cut(s)	130, 727, 1402, 1633
BstNI	CCWGG	2 cut(s)	26, 587
BstNSI	RCATGY	1 cut(s)	1058
BstSCI	CCNGG	3 cut(s)	24, 585, 1446
BstSFI	CTRYAG	3 cut(s)	487, 930, 1032
BstV1I	GCAGC	4 cut(s)	1315, 1337, 1421, 1618
BstV2I	GAAGAC	4 cut(s)	114, 801, 1509, 1545
BstX2I	RGATCY	1 cut(s)	926
BstXI	CCANNNNNNTGG	1 cut(s)	702
BstYI	RGATCY	1 cut(s)	926
BstZI	CGGCCG	1 cut(s)	63
BsuRI	GGCC	2 cut(s)	65, 1267
BtgZI	GCGATG	1 cut(s)	161
BtsCI	GGATG	3 cut(s)	418, 688, 1663
BveI	ACCTGC	1 cut(s)	181
Cac8I	GCNNGC	4 cut(s)	1255, 1288, 1323, 1407
CaiI	CAGNNNCTG	1 cut(s)	566
CciI	TCATGA	1 cut(s)	901
CfoI	GCGC	1 cut(s)	37
Cfr13I	GGNCC	4 cut(s)	659, 1177, 1220, 1313
Csp6I	GTAC	6 cut(s)	305, 313, 418, 522, 569, 1186
CspCI	CAANNNNNGTGG	4 cut(s)	174, 209, 1257, 1292
CviAII	CATG	7 cut(s)	316, 731, 810, 816, 902, 1055, 1370
CviQI	GTAC	6 cut(s)	305, 313, 418, 522, 569, 1186
DdeI	CTNAG	8 cut(s)	309, 504, 629, 1298, 1307, 1317, 1374, 1560
DpnI	GATC	9 cut(s)	117, 332, 783, 847, 870, 928, 1350, 1391, 1688
DpnII	GATC	9 cut(s)	115, 330, 781, 845, 868, 926, 1348, 1389, 1686
EaeI	YGGCCR	1 cut(s)	63
EagI	CGGCCG	1 cut(s)	63
Eam1104I	CTCTTC	6 cut(s)	123, 341, 746, 856, 923, 1523
EarI	CTCTTC	6 cut(s)	123, 341, 746, 856, 923, 1523
Ecl136II	GAGCTC	1 cut(s)	1306
EclXI	CGGCCG	1 cut(s)	63
Eco130I	CCWWGG	1 cut(s)	1181
Eco24I	GRGCYC	2 cut(s)	291, 1308
Eco47I	GGWCC	4 cut(s)	659, 1177, 1220, 1313
Eco52I	CGGCCG	1 cut(s)	63
Eco53kI	GAGCTC	1 cut(s)	1306
Eco88I	CYCGRG	1 cut(s)	204
EcoICRI	GAGCTC	1 cut(s)	1306
EcoO109I	RGGNCCY	2 cut(s)	1177, 1313
EcoRI	GAATTC	1 cut(s)	423
EcoRII	CCWGG	2 cut(s)	24, 585
EcoT14I	CCWWGG	1 cut(s)	1181
EcoT22I	ATGCAT	1 cut(s)	267
EcoT38I	GRGCYC	2 cut(s)	291, 1308
ErhI	CCWWGG	1 cut(s)	1181
Esp3I	CGTCTC	2 cut(s)	150, 858
FaeI	CATG	7 cut(s)	319, 734, 813, 819, 905, 1058, 1373
FalI	AAGNNNNNCTT	2 cut(s)	284, 316
FaqI	GGGAC	2 cut(s)	280, 1163
FatI	CATG	7 cut(s)	315, 730, 809, 815, 901, 1054, 1369
FauI	CCCGC	2 cut(s)	1509, 1527
FbaI	TGATCA	2 cut(s)	781, 1686
FblI	GTMKAC	1 cut(s)	1014
Fnu4HI	GCNGC	4 cut(s)	1326, 1329, 1410, 1607
FokI	GGATG	3 cut(s)	425, 675, 1670
FriOI	GRGCYC	2 cut(s)	291, 1308
Fsp4HI	GCNGC	4 cut(s)	1326, 1329, 1410, 1607
FspBI	CTAG	2 cut(s)	716, 1287
GlaI	GCGC	1 cut(s)	36
GluI	GCNGC	4 cut(s)	1326, 1329, 1410, 1607
GsaI	CCCAGC	2 cut(s)	411, 563
GsuI	CTGGAG	2 cut(s)	307, 976
HaeIII	GGCC	2 cut(s)	65, 1267
HapII	CCGG	1 cut(s)	1448
HhaI	GCGC	1 cut(s)	37
Hin1II	CATG	7 cut(s)	319, 734, 813, 819, 905, 1058, 1373
Hin6I	GCGC	1 cut(s)	35
HinP1I	GCGC	1 cut(s)	35
HincII	GTYRAC	3 cut(s)	60, 1024, 1443
HindII	GTYRAC	3 cut(s)	60, 1024, 1443
HindIII	AAGCTT	1 cut(s)	824
HpaII	CCGG	1 cut(s)	1448
HphI	GGTGA	8 cut(s)	208, 224, 238, 463, 675, 776, 1234, 1696
Hpy166II	GTNNAC	6 cut(s)	60, 418, 1015, 1024, 1060, 1443
Hpy188I	TCNGA	7 cut(s)	471, 505, 625, 845, 979, 1310, 1671
Hpy8I	GTNNAC	6 cut(s)	60, 418, 1015, 1024, 1060, 1443
HpyAV	CCTTC	4 cut(s)	1154, 1407, 1569, 1646
HpyCH4III	ACNGT	1 cut(s)	1272
HpyCH4V	TGCA	9 cut(s)	178, 265, 529, 605, 932, 1034, 1208, 1325, 1405
HpyF10VI	GCNNNNNNNGC	4 cut(s)	130, 727, 1402, 1633
HpyF3I	CTNAG	8 cut(s)	309, 504, 629, 1298, 1307, 1317, 1374, 1560
Hsp92II	CATG	7 cut(s)	319, 734, 813, 819, 905, 1058, 1373
HspAI	GCGC	1 cut(s)	35
KflI	GGGWCCC	1 cut(s)	1177
Ksp22I	TGATCA	2 cut(s)	781, 1686
Kzo9I	GATC	9 cut(s)	115, 330, 781, 845, 868, 926, 1348, 1389, 1686
LguI	GCTCTTC	1 cut(s)	123
LmnI	GCTCC	6 cut(s)	286, 957, 1303, 1417, 1549, 1680
Lsp1109I	GCAGC	4 cut(s)	1315, 1337, 1421, 1618
LweI	GCATC	4 cut(s)	572, 865, 895, 1217
MaeI	CTAG	2 cut(s)	716, 1287
MaeIII	GTNAC	3 cut(s)	613, 673, 1614
MalI	GATC	9 cut(s)	117, 332, 783, 847, 870, 928, 1350, 1391, 1688
MboI	GATC	9 cut(s)	115, 330, 781, 845, 868, 926, 1348, 1389, 1686
MfeI	CAATTG	1 cut(s)	663
MflI	RGATCY	1 cut(s)	926
MhlI	GDGCHC	2 cut(s)	291, 1308
MluCI	AATT	3 cut(s)	423, 663, 1203
MlyI	GAGTC	7 cut(s)	21, 314, 732, 992, 1366, 1391, 1448
MmeI	TCCRAC	1 cut(s)	49
Mph1103I	ATGCAT	1 cut(s)	267
MslI	CAYNNNNRTG	2 cut(s)	808, 814
MspA1I	CMGCKG	3 cut(s)	431, 1328, 1559
MspI	CCGG	1 cut(s)	1448
MspR9I	CCNGG	3 cut(s)	26, 587, 1448
MunI	CAATTG	1 cut(s)	663
Mva1269I	GAATGC	1 cut(s)	605
MvaI	CCWGG	2 cut(s)	26, 587
MwoI	GCNNNNNNNGC	4 cut(s)	130, 727, 1402, 1633
NciI	CCSGG	1 cut(s)	1448
NdeII	GATC	9 cut(s)	115, 330, 781, 845, 868, 926, 1348, 1389, 1686
NheI	GCTAGC	1 cut(s)	1286
NlaIII	CATG	7 cut(s)	319, 734, 813, 819, 905, 1058, 1373
NlaIV	GGNNCC	6 cut(s)	288, 1050, 1132, 1178, 1179, 1676
NmeAIII	GCCGAG	2 cut(s)	1115, 1229
NmuCI	GTSAC	2 cut(s)	673, 1614
NsiI	ATGCAT	1 cut(s)	267
NspI	RCATGY	1 cut(s)	1058
PaeR7I	CTCGAG	1 cut(s)	204
PagI	TCATGA	1 cut(s)	901
PaqCI	CACCTGC	1 cut(s)	181
PciI	ACATGT	1 cut(s)	1054
PciSI	GCTCTTC	1 cut(s)	123
PctI	GAATGC	1 cut(s)	605
PfeI	GAWTC	5 cut(s)	680, 711, 765, 974, 1239
PkrI	GCNGC	4 cut(s)	1327, 1330, 1411, 1608
PleI	GAGTC	7 cut(s)	20, 314, 732, 992, 1365, 1390, 1447
PpsI	GAGTC	7 cut(s)	20, 314, 732, 992, 1365, 1390, 1447
PpuMI	RGGWCCY	2 cut(s)	1177, 1313
PscI	ACATGT	1 cut(s)	1054
Psp124BI	GAGCTC	1 cut(s)	1308
Psp5II	RGGWCCY	2 cut(s)	1177, 1313
Psp6I	CCWGG	2 cut(s)	24, 585
PspFI	CCCAGC	2 cut(s)	407, 559
PspGI	CCWGG	2 cut(s)	24, 585
PspN4I	GGNNCC	6 cut(s)	288, 1050, 1132, 1178, 1179, 1676
PspPI	GGNCC	4 cut(s)	659, 1177, 1220, 1313
PspPPI	RGGWCCY	2 cut(s)	1177, 1313
PspXI	VCTCGAGB	1 cut(s)	204
PstI	CTGCAG	2 cut(s)	934, 1036
PstNI	CAGNNNCTG	1 cut(s)	566
PsuI	RGATCY	1 cut(s)	926
PvuII	CAGCTG	3 cut(s)	431, 1328, 1559
RsaI	GTAC	6 cut(s)	306, 314, 419, 523, 570, 1187
RsaNI	GTAC	6 cut(s)	305, 313, 418, 522, 569, 1186
RseI	CAYNNNNRTG	2 cut(s)	808, 814
SacI	GAGCTC	1 cut(s)	1308
SapI	GCTCTTC	1 cut(s)	123
SatI	GCNGC	4 cut(s)	1326, 1329, 1410, 1607
Sau3AI	GATC	9 cut(s)	115, 330, 781, 845, 868, 926, 1348, 1389, 1686
Sau96I	GGNCC	4 cut(s)	659, 1177, 1220, 1313
SchI	GAGTC	7 cut(s)	21, 314, 732, 992, 1366, 1391, 1448
ScrFI	CCNGG	3 cut(s)	26, 587, 1448
SduI	GDGCHC	2 cut(s)	291, 1308
SfaNI	GCATC	4 cut(s)	572, 865, 895, 1217
SfcI	CTRYAG	3 cut(s)	487, 930, 1032
Sfr274I	CTCGAG	1 cut(s)	204
SinI	GGWCC	4 cut(s)	659, 1177, 1220, 1313
SlaI	CTCGAG	1 cut(s)	204
SmiMI	CAYNNNNRTG	2 cut(s)	808, 814
SmlI	CTYRAG	2 cut(s)	204, 1226
SmoI	CTYRAG	2 cut(s)	204, 1226
Sse9I	AATT	3 cut(s)	423, 663, 1203
SsiI	CCGC	2 cut(s)	1516, 1534
SspMI	CTAG	2 cut(s)	716, 1287
SstI	GAGCTC	1 cut(s)	1308
StyD4I	CCNGG	3 cut(s)	24, 585, 1446
StyI	CCWWGG	1 cut(s)	1181
TaaI	ACNGT	1 cut(s)	1272
TaqI	TCGA	3 cut(s)	79, 205, 597
TasI	AATT	3 cut(s)	423, 663, 1203
TatI	WGTACW	3 cut(s)	312, 417, 568
TfiI	GAWTC	5 cut(s)	680, 711, 765, 974, 1239
TseFI	GTSAC	2 cut(s)	673, 1614
TseI	GCWGC	4 cut(s)	1325, 1328, 1409, 1606
Tsp45I	GTSAC	2 cut(s)	673, 1614
TspDTI	ATGAA	5 cut(s)	99, 396, 764, 1157, 1358
TspGWI	ACGGA	1 cut(s)	1143
VpaK11BI	GGWCC	4 cut(s)	659, 1177, 1220, 1313
XapI	RAATTY	1 cut(s)	423
XceI	RCATGY	1 cut(s)	1058
XcmI	CCANNNNNNNNNTGG	1 cut(s)	699
XhoI	CTCGAG	1 cut(s)	204
XmiI	GTMKAC	1 cut(s)	1014
XspI	CTAG	2 cut(s)	716, 1287
Zsp2I	ATGCAT	1 cut(s)	267

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.