Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0001754

Physical Location & Seq

Genomic Coordinates Reverse (-)

59670525 .. 59673548

Gene Structure 3024 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG431300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1710 bp

ATGGAAAACAGAGTCATTAGCCTCCTGGTCATTGCGCTCATTATGTGCTATGGATTGTCAACGGCCGTTGGATTTTATCGAGATGAAGACTGGGGGAAGCAGAGAGAAGACCCCGATCAAGAGCAGGAAGAGCAAGAGCAAGAAGCGATGATGGGAGACGAGGATTGGTTCTTGTTGCAGAACTCAAAGCAGGTGGTGAAAACTCGAGCTGGTGAAATGAGAGTGGTGAAAAGCGTAGGTGGGAGGATTGTTGATAAGCCAATGCATATTGGGTTTATTACAATGGAGCCCAAGTCCCTCTTTGTACCTCAGTACATGGACTCCAGCTTGATCCTCTTCGTCCATTCTGGGGAAGCAAAGGTAGGGCTGATATACAGAGATGAACTGGGAGAGAGGAGATTGAGGGCTGGGGATGTGTACAGAATTCCAGCTGGTTCGCCGTTTTATTTGGTGAATACAGGGGAGGGTCAGAGACTTCACATCATCTGTAGCGTTGATACATCTGAGAGTTTGGGAATGGGTACTTTGCAGTCTTTCTACATTGGTGGAGGATATAACCCAGCATCTGTACTTGCTGGATTTGACCAGGAAATACTCGAAAGTGCATTCAATGTTACATCATCAGAACTAAGTGATTTCTTGTCAAGGCAACAAGATGGTCCGATTGTATATGTGACTGATTCACCTCATCCACCAAGCCTTTGGTCAAGATTCCTAGAGCTGAAAGAGCATGACAGACTCCAAAATATGAAGAGAATGGTGGGCTTCACAAAAGAACCTGATCACCAAGAAGAAGACCAATCATTAGCATGGTCATGGAGGAAGCTTCTCAACTCTGTGTTCGGATCAAATGACAAGAGAAGAGACGATCCCGATGCTTACAAGGGAAAAGGAAAATCTCATGATGCTTACAACCTCTTCAAGAGATCTGCAGATTTCAAAAACGACTATGGCTGGAGCAAGGCACTTGACGAATCTGATTACTCGCCACTAAGAGACTCTGGCGTTGGTGTCTTCCTTGTCAACCTTTCTGCAGGGTCAATGATGGCACCACATGTGAACCCAATAGCAACAGAGTATGGGATTGTATTGAGAGGCTCTGGCACAATACAGATTGTATTTCCAAACGGAACCTCGGCAATGAATACTAAAGTTCAAGAAGGAGATGTGTTTTGGGTCCCAAGGTACTTCCCATTCTGTCAAATTGCATCAAGAACTGGTCCTCTTGAGTTCTTTGGATTCACCACCTCGGCACGCAAGAACAGGCCACAGTTCTTGGTTGGTGCTAGCTCTGTTCTTAGGGAGCTCAGAGGACCTGAGCTTGCAGCTGCTTTTGGTGTGAATGAGGATCGGTTGAGTCGAATTGTTCATGCTCAGCGTGAGTCTGTGATCTTGCCTTCGGTGCAAGCAGCTCCTCCTTACAAGGGGGAGGAGAGAGAGCCAACCCCGGAGGAGGAGACAGGGAAGCAAACCCCATACAAGGAGGACGAGAGGAGGCAGGAAGACAGGAGGAGGCGGGAAGACGAGAGGGAGCAATCAGCTGAGGAAGATGAGAGAAGGCAACCCCCATACAAGGAAGATGAGAGGCAGCAGTCGTCACAGGAGAAGCAGAGGAGGCAACCTCCATACGGGGAAGGGGATGTGATGTTTCAGAGGCTCCCAAAGGTGATCAAGAGTTTCGGGAATGAGATGGTTATGGGTTTTGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005911 GO:0006950 GO:0006952 GO:0008150 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0030054 GO:0043207 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0098542

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cupin_1

Protein Analysis

569

Amino Acids

64.72

Weight (kDa)

5.25

Isoelectric Point (pI)

55.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cupin_1	PF00190	91 - 209	4e-09	Cupin
Cupin_1	PF00190	304 - 449	1.7e-32	Cupin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001754)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G28490
fragaria_vesca	FvH4_3g33180 FvH4_3g33190 FvH4_3g33240
malus_domestica	MD03G1105100.v1.1 MD11G1130400.v1.1
prunus_persica	Prupe.6G095000_v2.0.a1
pyrus_communis	pycom11g10790 pycom11g10800
rosa_chinensis	RchiOBHm_Chr5g0060491 RchiOBHm_Chr5g0060501 RchiOBHm_Chr5g0060531 RchiOBHm_Chr5g0060591
rosa_laevigata	RLG00000035368 RLG00000035369 RLG00000035372 RLG00000035373
rosa_multiflora	Rmu_co8403353.1_g000001 Rmu_sc0001650.1_g000002 Rmu_sc0001650.1_g000006 Rmu_sc0001650.1_g000014 Rmu_sc0001650.1_g000017 Rmu_sc0007864.1_g000004 Rmu_sc0007864.1_g000006 Rmu_sc0034083.1_g000001
rosa_roxburghii	Rroxscaffold_1G00020220 Rroxscaffold_1G00020240 Rroxscaffold_1G00020280 Rroxscaffold_1G00020290
rosa_rugosa	Rorug05G0330900 Rorug05G0330900 Rorug05G0331000
rosa_samantha	Rh5AG395200 Rh5AG395300 Rh5AG395400 Rh5BG407600 Rh5BG407700 Rh5CG431300 Rh5CG431400 Rh5CG431700 Rh5CG432100 Rh5DG422400 Rh5DG422500 Rh5DG422600
rosa_wichuraiana	Rw5G037170 Rw5G037180 Rw5G037190 Rw5G037200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	181
Acc36I	ACCTGC	1 cut(s)	181
AccB1I	GGYRCC	1 cut(s)	1048
AciI	CCGC	1 cut(s)	1516
AclWI	GGATC	4 cut(s)	325, 853, 863, 1356
AcoI	YGGCCR	1 cut(s)	63
AcsI	RAATTY	1 cut(s)	423
AfaI	GTAC	6 cut(s)	306, 314, 419, 523, 570, 1187
AfiI	CCNNNNNNNGG	6 cut(s)	349, 1424, 1453, 1480, 1573, 1628
AflIII	ACRYGT	1 cut(s)	1054
AgsI	TTSAA	4 cut(s)	610, 922, 940, 1157
AjnI	CCWGG	2 cut(s)	24, 585
Alw21I	GWGCWC	1 cut(s)	1308
Alw26I	GTCTC	5 cut(s)	150, 466, 858, 990, 1451
AlwI	GGATC	4 cut(s)	325, 853, 863, 1356
AlwNI	CAGNNNCTG	1 cut(s)	566
Ama87I	CYCGRG	1 cut(s)	204
AoxI	GGCC	2 cut(s)	63, 1265
ApeKI	GCWGC	4 cut(s)	1325, 1328, 1409, 1588
ApoI	RAATTY	1 cut(s)	423
AspLEI	GCGC	1 cut(s)	37
AspS9I	GGNCC	4 cut(s)	659, 1177, 1220, 1313
AsuC2I	CCSGG	1 cut(s)	1448
AsuHPI	GGTGA	8 cut(s)	208, 224, 238, 463, 675, 776, 1234, 1678
AsuNHI	GCTAGC	1 cut(s)	1286
AvaI	CYCGRG	1 cut(s)	204
AvaII	GGWCC	4 cut(s)	659, 1177, 1220, 1313
BanI	GGYRCC	1 cut(s)	1048
BanII	GRGCYC	2 cut(s)	291, 1308
BbsI	GAAGAC	6 cut(s)	93, 114, 801, 1006, 1509, 1527
Bbv12I	GWGCWC	1 cut(s)	1308
BbvCI	CCTCAGC	1 cut(s)	1542
BbvI	GCAGC	4 cut(s)	1315, 1337, 1421, 1600
BccI	CCATC	4 cut(s)	145, 650, 1039, 1684
BceAI	ACGGC	3 cut(s)	50, 78, 424
BcgI	CGANNNNNNTGC	2 cut(s)	857, 891
BciT130I	CCWGG	2 cut(s)	26, 587
BclI	TGATCA	2 cut(s)	781, 1668
BcnI	CCSGG	1 cut(s)	1448
BcoDI	GTCTC	5 cut(s)	150, 466, 858, 990, 1451
BfaI	CTAG	2 cut(s)	716, 1287
BfmI	CTRYAG	3 cut(s)	487, 930, 1032
BfuAI	ACCTGC	1 cut(s)	181
BglII	AGATCT	1 cut(s)	926
BisI	GCNGC	4 cut(s)	1326, 1329, 1410, 1589
BlpI	GCTNAGC	1 cut(s)	1374
BlsI	GCNGC	4 cut(s)	1327, 1330, 1411, 1590
Bme1390I	CCNGG	3 cut(s)	26, 587, 1448
Bme18I	GGWCC	4 cut(s)	659, 1177, 1220, 1313
BmeT110I	CYCGRG	1 cut(s)	204
BmgT120I	GGNCC	4 cut(s)	659, 1177, 1220, 1313
BmiI	GGNNCC	6 cut(s)	288, 1050, 1132, 1178, 1179, 1658
BmrFI	CCNGG	3 cut(s)	26, 587, 1448
BmrI	ACTGGG	2 cut(s)	100, 395
BmsI	GCATC	4 cut(s)	572, 865, 895, 1217
BmtI	GCTAGC	1 cut(s)	1290
BmuI	ACTGGG	2 cut(s)	100, 395
BpiI	GAAGAC	6 cut(s)	93, 114, 801, 1006, 1509, 1527
BplI	GAGNNNNNCTC	2 cut(s)	1606, 1638
BpmI	CTGGAG	2 cut(s)	307, 976
Bpu10I	CCTNAGC	2 cut(s)	1317, 1542
Bpu1102I	GCTNAGC	1 cut(s)	1374
BpuEI	CTTGAG	1 cut(s)	1247
BpuMI	CCSGG	1 cut(s)	1448
BsaJI	CCNNGG	4 cut(s)	1134, 1181, 1248, 1446
BsaXI	ACNNNNNCTCC	4 cut(s)	278, 305, 308, 335
Bsc4I	CCNNNNNNNGG	6 cut(s)	349, 1424, 1453, 1480, 1573, 1628
Bse1I	ACTGG	3 cut(s)	95, 390, 1222
Bse3DI	GCAATG	2 cut(s)	30, 1146
BseBI	CCWGG	2 cut(s)	26, 587
BseDI	CCNNGG	4 cut(s)	1134, 1181, 1248, 1446
BseGI	GGATG	3 cut(s)	418, 688, 1645
BseLI	CCNNNNNNNGG	6 cut(s)	349, 1424, 1453, 1480, 1573, 1628
BseMI	GCAATG	2 cut(s)	30, 1146
BseMII	CTCAG	6 cut(s)	323, 495, 1308, 1321, 1388, 1533
BseNI	ACTGG	3 cut(s)	95, 390, 1222
BseRI	GAGGAG	8 cut(s)	409, 1404, 1445, 1466, 1469, 1507, 1525, 1627
BseX3I	CGGCCG	1 cut(s)	63
BseXI	GCAGC	4 cut(s)	1315, 1337, 1421, 1600
BseYI	CCCAGC	2 cut(s)	407, 559
Bsh1285I	CGRYCG	1 cut(s)	66
BshFI	GGCC	2 cut(s)	65, 1267
BshNI	GGYRCC	1 cut(s)	1048
BsiEI	CGRYCG	1 cut(s)	66
BsiHKAI	GWGCWC	1 cut(s)	1308
BsiHKCI	CYCGRG	1 cut(s)	204
BsiSI	CCGG	1 cut(s)	1448
BslFI	GGGAC	2 cut(s)	280, 1163
BslI	CCNNNNNNNGG	6 cut(s)	349, 1424, 1453, 1480, 1573, 1628
BsmAI	GTCTC	5 cut(s)	150, 466, 858, 990, 1451
BsmBI	CGTCTC	2 cut(s)	150, 858
BsmFI	GGGAC	2 cut(s)	280, 1163
BsmI	GAATGC	1 cut(s)	605
BsnI	GGCC	2 cut(s)	65, 1267
BsoBI	CYCGRG	1 cut(s)	204
Bsp1286I	GDGCHC	2 cut(s)	291, 1308
Bsp1407I	TGTACA	1 cut(s)	417
Bsp143I	GATC	9 cut(s)	115, 330, 781, 845, 868, 926, 1348, 1389, 1668
Bsp1720I	GCTNAGC	1 cut(s)	1374
BspACI	CCGC	1 cut(s)	1516
BspANI	GGCC	2 cut(s)	65, 1267
BspCNI	CTCAG	6 cut(s)	322, 496, 1309, 1320, 1387, 1534
BspHI	TCATGA	1 cut(s)	901
BspLI	GGNNCC	6 cut(s)	288, 1050, 1132, 1178, 1179, 1658
BspMAI	CTGCAG	2 cut(s)	934, 1036
BspMI	ACCTGC	1 cut(s)	181
BspOI	GCTAGC	1 cut(s)	1290
BspPI	GGATC	4 cut(s)	325, 853, 863, 1356
BspQI	GCTCTTC	1 cut(s)	123
BspT107I	GGYRCC	1 cut(s)	1048
BsrDI	GCAATG	2 cut(s)	30, 1146
BsrGI	TGTACA	1 cut(s)	417
BsrI	ACTGG	3 cut(s)	95, 390, 1222
BssECI	CCNNGG	4 cut(s)	1134, 1181, 1248, 1446
BssMI	GATC	9 cut(s)	115, 330, 781, 845, 868, 926, 1348, 1389, 1668
BssT1I	CCWWGG	1 cut(s)	1181
Bst2UI	CCWGG	2 cut(s)	26, 587
Bst4CI	ACNGT	1 cut(s)	1272
Bst6I	CTCTTC	5 cut(s)	123, 341, 746, 856, 923
BstAUI	TGTACA	1 cut(s)	417
BstC8I	GCNNGC	4 cut(s)	1255, 1288, 1323, 1407
BstDEI	CTNAG	9 cut(s)	309, 504, 629, 992, 1298, 1307, 1317, 1374, 1542
BstF5I	GGATG	3 cut(s)	418, 688, 1645
BstHHI	GCGC	1 cut(s)	37
BstKTI	GATC	9 cut(s)	118, 333, 784, 848, 871, 929, 1351, 1392, 1671
BstMAI	GTCTC	5 cut(s)	150, 466, 858, 990, 1451
BstMBI	GATC	9 cut(s)	115, 330, 781, 845, 868, 926, 1348, 1389, 1668
BstMCI	CGRYCG	1 cut(s)	66
BstMWI	GCNNNNNNNGC	4 cut(s)	130, 727, 1402, 1615
BstNI	CCWGG	2 cut(s)	26, 587
BstNSI	RCATGY	1 cut(s)	1058
BstSCI	CCNGG	3 cut(s)	24, 585, 1446
BstSFI	CTRYAG	3 cut(s)	487, 930, 1032
BstV1I	GCAGC	4 cut(s)	1315, 1337, 1421, 1600
BstV2I	GAAGAC	6 cut(s)	93, 114, 801, 1006, 1509, 1527
BstX2I	RGATCY	1 cut(s)	926
BstXI	CCANNNNNNTGG	1 cut(s)	702
BstYI	RGATCY	1 cut(s)	926
BstZI	CGGCCG	1 cut(s)	63
BsuRI	GGCC	2 cut(s)	65, 1267
BtgZI	GCGATG	1 cut(s)	161
BtsCI	GGATG	3 cut(s)	418, 688, 1645
BveI	ACCTGC	1 cut(s)	181
Cac8I	GCNNGC	4 cut(s)	1255, 1288, 1323, 1407
CaiI	CAGNNNCTG	1 cut(s)	566
CciI	TCATGA	1 cut(s)	901
CfoI	GCGC	1 cut(s)	37
Cfr13I	GGNCC	4 cut(s)	659, 1177, 1220, 1313
Csp6I	GTAC	6 cut(s)	305, 313, 418, 522, 569, 1186
CspCI	CAANNNNNGTGG	4 cut(s)	174, 209, 1257, 1292
CviAII	CATG	7 cut(s)	316, 731, 810, 816, 902, 1055, 1370
CviQI	GTAC	6 cut(s)	305, 313, 418, 522, 569, 1186
DdeI	CTNAG	9 cut(s)	309, 504, 629, 992, 1298, 1307, 1317, 1374, 1542
DpnI	GATC	9 cut(s)	117, 332, 783, 847, 870, 928, 1350, 1391, 1670
DpnII	GATC	9 cut(s)	115, 330, 781, 845, 868, 926, 1348, 1389, 1668
EaeI	YGGCCR	1 cut(s)	63
EagI	CGGCCG	1 cut(s)	63
Eam1104I	CTCTTC	5 cut(s)	123, 341, 746, 856, 923
EarI	CTCTTC	5 cut(s)	123, 341, 746, 856, 923
Ecl136II	GAGCTC	1 cut(s)	1306
EclXI	CGGCCG	1 cut(s)	63
Eco130I	CCWWGG	1 cut(s)	1181
Eco24I	GRGCYC	2 cut(s)	291, 1308
Eco47I	GGWCC	4 cut(s)	659, 1177, 1220, 1313
Eco52I	CGGCCG	1 cut(s)	63
Eco53kI	GAGCTC	1 cut(s)	1306
Eco88I	CYCGRG	1 cut(s)	204
EcoICRI	GAGCTC	1 cut(s)	1306
EcoO109I	RGGNCCY	2 cut(s)	1177, 1313
EcoRI	GAATTC	1 cut(s)	423
EcoRII	CCWGG	2 cut(s)	24, 585
EcoT14I	CCWWGG	1 cut(s)	1181
EcoT22I	ATGCAT	1 cut(s)	267
EcoT38I	GRGCYC	2 cut(s)	291, 1308
ErhI	CCWWGG	1 cut(s)	1181
Esp3I	CGTCTC	2 cut(s)	150, 858
FaeI	CATG	7 cut(s)	319, 734, 813, 819, 905, 1058, 1373
FalI	AAGNNNNNCTT	2 cut(s)	284, 316
FaqI	GGGAC	2 cut(s)	280, 1163
FatI	CATG	7 cut(s)	315, 730, 809, 815, 901, 1054, 1369
FauI	CCCGC	1 cut(s)	1509
FbaI	TGATCA	2 cut(s)	781, 1668
Fnu4HI	GCNGC	4 cut(s)	1326, 1329, 1410, 1589
FokI	GGATG	3 cut(s)	425, 675, 1652
FriOI	GRGCYC	2 cut(s)	291, 1308
Fsp4HI	GCNGC	4 cut(s)	1326, 1329, 1410, 1589
FspBI	CTAG	2 cut(s)	716, 1287
GlaI	GCGC	1 cut(s)	36
GluI	GCNGC	4 cut(s)	1326, 1329, 1410, 1589
GsaI	CCCAGC	2 cut(s)	411, 563
GsuI	CTGGAG	2 cut(s)	307, 976
HaeIII	GGCC	2 cut(s)	65, 1267
HapII	CCGG	1 cut(s)	1448
HhaI	GCGC	1 cut(s)	37
Hin1II	CATG	7 cut(s)	319, 734, 813, 819, 905, 1058, 1373
Hin6I	GCGC	1 cut(s)	35
HinP1I	GCGC	1 cut(s)	35
HincII	GTYRAC	2 cut(s)	60, 1024
HindII	GTYRAC	2 cut(s)	60, 1024
HindIII	AAGCTT	1 cut(s)	824
HpaII	CCGG	1 cut(s)	1448
HphI	GGTGA	8 cut(s)	208, 224, 238, 463, 675, 776, 1234, 1678
Hpy166II	GTNNAC	4 cut(s)	60, 418, 1024, 1060
Hpy188I	TCNGA	8 cut(s)	471, 505, 625, 663, 845, 979, 1310, 1653
Hpy8I	GTNNAC	4 cut(s)	60, 418, 1024, 1060
HpyAV	CCTTC	4 cut(s)	1154, 1407, 1551, 1628
HpyCH4III	ACNGT	1 cut(s)	1272
HpyCH4V	TGCA	9 cut(s)	178, 265, 529, 605, 932, 1034, 1208, 1325, 1405
HpyF10VI	GCNNNNNNNGC	4 cut(s)	130, 727, 1402, 1615
HpyF3I	CTNAG	9 cut(s)	309, 504, 629, 992, 1298, 1307, 1317, 1374, 1542
Hsp92II	CATG	7 cut(s)	319, 734, 813, 819, 905, 1058, 1373
HspAI	GCGC	1 cut(s)	35
KflI	GGGWCCC	1 cut(s)	1177
Ksp22I	TGATCA	2 cut(s)	781, 1668
Kzo9I	GATC	9 cut(s)	115, 330, 781, 845, 868, 926, 1348, 1389, 1668
LguI	GCTCTTC	1 cut(s)	123
LmnI	GCTCC	6 cut(s)	286, 957, 1303, 1417, 1531, 1662
Lsp1109I	GCAGC	4 cut(s)	1315, 1337, 1421, 1600
LweI	GCATC	4 cut(s)	572, 865, 895, 1217
MaeI	CTAG	2 cut(s)	716, 1287
MaeIII	GTNAC	3 cut(s)	613, 673, 1596
MalI	GATC	9 cut(s)	117, 332, 783, 847, 870, 928, 1350, 1391, 1670
MboI	GATC	9 cut(s)	115, 330, 781, 845, 868, 926, 1348, 1389, 1668
MflI	RGATCY	1 cut(s)	926
MhlI	GDGCHC	2 cut(s)	291, 1308
MluCI	AATT	3 cut(s)	423, 1203, 1362
MlyI	GAGTC	6 cut(s)	21, 314, 732, 992, 1366, 1391
MmeI	TCCRAC	1 cut(s)	49
Mph1103I	ATGCAT	1 cut(s)	267
MslI	CAYNNNNRTG	2 cut(s)	808, 814
MspA1I	CMGCKG	3 cut(s)	431, 1328, 1541
MspI	CCGG	1 cut(s)	1448
MspR9I	CCNGG	3 cut(s)	26, 587, 1448
Mva1269I	GAATGC	1 cut(s)	605
MvaI	CCWGG	2 cut(s)	26, 587
MwoI	GCNNNNNNNGC	4 cut(s)	130, 727, 1402, 1615
NciI	CCSGG	1 cut(s)	1448
NdeII	GATC	9 cut(s)	115, 330, 781, 845, 868, 926, 1348, 1389, 1668
NheI	GCTAGC	1 cut(s)	1286
NlaIII	CATG	7 cut(s)	319, 734, 813, 819, 905, 1058, 1373
NlaIV	GGNNCC	6 cut(s)	288, 1050, 1132, 1178, 1179, 1658
NmeAIII	GCCGAG	2 cut(s)	1115, 1229
NmuCI	GTSAC	2 cut(s)	673, 1596
NsiI	ATGCAT	1 cut(s)	267
NspI	RCATGY	1 cut(s)	1058
PaeR7I	CTCGAG	1 cut(s)	204
PagI	TCATGA	1 cut(s)	901
PaqCI	CACCTGC	1 cut(s)	181
PciI	ACATGT	1 cut(s)	1054
PciSI	GCTCTTC	1 cut(s)	123
PcsI	WCGNNNNNNNCGW	1 cut(s)	1357
PctI	GAATGC	1 cut(s)	605
PfeI	GAWTC	4 cut(s)	680, 711, 974, 1239
PkrI	GCNGC	4 cut(s)	1327, 1330, 1411, 1590
PleI	GAGTC	6 cut(s)	20, 314, 732, 992, 1365, 1390
PpsI	GAGTC	6 cut(s)	20, 314, 732, 992, 1365, 1390
PpuMI	RGGWCCY	2 cut(s)	1177, 1313
PscI	ACATGT	1 cut(s)	1054
Psp124BI	GAGCTC	1 cut(s)	1308
Psp5II	RGGWCCY	2 cut(s)	1177, 1313
Psp6I	CCWGG	2 cut(s)	24, 585
PspFI	CCCAGC	2 cut(s)	407, 559
PspGI	CCWGG	2 cut(s)	24, 585
PspN4I	GGNNCC	6 cut(s)	288, 1050, 1132, 1178, 1179, 1658
PspPI	GGNCC	4 cut(s)	659, 1177, 1220, 1313
PspPPI	RGGWCCY	2 cut(s)	1177, 1313
PspXI	VCTCGAGB	1 cut(s)	204
PstI	CTGCAG	2 cut(s)	934, 1036
PstNI	CAGNNNCTG	1 cut(s)	566
PsuI	RGATCY	1 cut(s)	926
PvuII	CAGCTG	3 cut(s)	431, 1328, 1541
RsaI	GTAC	6 cut(s)	306, 314, 419, 523, 570, 1187
RsaNI	GTAC	6 cut(s)	305, 313, 418, 522, 569, 1186
RseI	CAYNNNNRTG	2 cut(s)	808, 814
SacI	GAGCTC	1 cut(s)	1308
SapI	GCTCTTC	1 cut(s)	123
SatI	GCNGC	4 cut(s)	1326, 1329, 1410, 1589
Sau3AI	GATC	9 cut(s)	115, 330, 781, 845, 868, 926, 1348, 1389, 1668
Sau96I	GGNCC	4 cut(s)	659, 1177, 1220, 1313
SchI	GAGTC	6 cut(s)	21, 314, 732, 992, 1366, 1391
ScrFI	CCNGG	3 cut(s)	26, 587, 1448
SduI	GDGCHC	2 cut(s)	291, 1308
SfaNI	GCATC	4 cut(s)	572, 865, 895, 1217
SfcI	CTRYAG	3 cut(s)	487, 930, 1032
Sfr274I	CTCGAG	1 cut(s)	204
SinI	GGWCC	4 cut(s)	659, 1177, 1220, 1313
SlaI	CTCGAG	1 cut(s)	204
SmiMI	CAYNNNNRTG	2 cut(s)	808, 814
SmlI	CTYRAG	2 cut(s)	204, 1226
SmoI	CTYRAG	2 cut(s)	204, 1226
Sse9I	AATT	3 cut(s)	423, 1203, 1362
SsiI	CCGC	1 cut(s)	1516
SspMI	CTAG	2 cut(s)	716, 1287
SstI	GAGCTC	1 cut(s)	1308
StyD4I	CCNGG	3 cut(s)	24, 585, 1446
StyI	CCWWGG	1 cut(s)	1181
TaaI	ACNGT	1 cut(s)	1272
TaqI	TCGA	4 cut(s)	79, 205, 597, 1360
TasI	AATT	3 cut(s)	423, 1203, 1362
TatI	WGTACW	3 cut(s)	312, 417, 568
TfiI	GAWTC	4 cut(s)	680, 711, 974, 1239
TseFI	GTSAC	2 cut(s)	673, 1596
TseI	GCWGC	4 cut(s)	1325, 1328, 1409, 1588
Tsp45I	GTSAC	2 cut(s)	673, 1596
TspDTI	ATGAA	5 cut(s)	99, 396, 764, 1157, 1358
TspGWI	ACGGA	1 cut(s)	1143
VpaK11BI	GGWCC	4 cut(s)	659, 1177, 1220, 1313
XapI	RAATTY	1 cut(s)	423
XceI	RCATGY	1 cut(s)	1058
XcmI	CCANNNNNNNNNTGG	1 cut(s)	699
XhoI	CTCGAG	1 cut(s)	204
XspI	CTAG	2 cut(s)	716, 1287
Zsp2I	ATGCAT	1 cut(s)	267

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.