No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G67620 |
| fragaria_vesca | FvH4_4g24330 FvH4_4g24330 FvH4_4g24330 FvH4_4g24330 FvH4_4g24330 FvH4_4g24330 |
| malus_domestica | MD13G1112100.v1.1 MD16G1111700.v1.1 |
| prunus_persica | Prupe.1G233300_v2.0.a1 |
| pyrus_communis | pycom13g09750 pycom16g09470 |
| rosa_chinensis | RchiOBHm_Chr1g0343341 RchiOBHm_Chr1g0366581 RchiOBHm_Chr3g0456071 RchiOBHm_Chr4g0431131 RchiOBHm_Chr7g0183971 RchiOBHm_Chr7g0198741 |
| rosa_laevigata | RLG00000006921 |
| rosa_multiflora | Rmu_sc0005258.1_g000002 Rmu_sc0014629.1_g000007 Rmu_sc0023228.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00015160 Rroxscaffold_5G00372730 Rroxscaffold_7G00210320 |
| rosa_rugosa | Rorug04G0248600 |
| rosa_samantha | Rh1CG146700 Rh1CG169800 Rh3AG217500 Rh3DG326500 Rh4AG304900 Rh4BG312100 Rh4CG328400 Rh4DG308700 Rh5AG537300 Rh6BG131200 Rh6DG116800 |
| rosa_wichuraiana | Rw1G009740 Rw4G026500 Rw5G039480 Rw6G009530 Rw6G012160 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 52 |
| AfaI | GTAC | 1 cut(s) | 138 |
| AjnI | CCWGG | 1 cut(s) | 62 |
| AluBI | AGCT | 1 cut(s) | 156 |
| AluI | AGCT | 1 cut(s) | 156 |
| ApeKI | GCWGC | 2 cut(s) | 18, 127 |
| AsuC2I | CCSGG | 1 cut(s) | 110 |
| AsuHPI | GGTGA | 1 cut(s) | 124 |
| BanI | GGYRCC | 1 cut(s) | 52 |
| BbvI | GCAGC | 2 cut(s) | 5, 139 |
| BciT130I | CCWGG | 1 cut(s) | 64 |
| BcnI | CCSGG | 1 cut(s) | 110 |
| BisI | GCNGC | 2 cut(s) | 19, 128 |
| BlsI | GCNGC | 2 cut(s) | 20, 129 |
| Bme1390I | CCNGG | 2 cut(s) | 64, 110 |
| BmiI | GGNNCC | 1 cut(s) | 54 |
| BmrFI | CCNGG | 2 cut(s) | 64, 110 |
| BmsI | GCATC | 1 cut(s) | 163 |
| BpuMI | CCSGG | 1 cut(s) | 110 |
| BsaAI | YACGTR | 1 cut(s) | 140 |
| Bse3DI | GCAATG | 1 cut(s) | 28 |
| BseBI | CCWGG | 1 cut(s) | 64 |
| BseMI | GCAATG | 1 cut(s) | 28 |
| BseXI | GCAGC | 2 cut(s) | 5, 139 |
| BshNI | GGYRCC | 1 cut(s) | 52 |
| BsiSI | CCGG | 1 cut(s) | 110 |
| BsiWI | CGTACG | 1 cut(s) | 136 |
| BspHI | TCATGA | 1 cut(s) | 179 |
| BspLI | GGNNCC | 1 cut(s) | 54 |
| BspT107I | GGYRCC | 1 cut(s) | 52 |
| BsrDI | GCAATG | 1 cut(s) | 28 |
| Bst2UI | CCWGG | 1 cut(s) | 64 |
| Bst4CI | ACNGT | 1 cut(s) | 71 |
| BstBAI | YACGTR | 1 cut(s) | 140 |
| BstNI | CCWGG | 1 cut(s) | 64 |
| BstSCI | CCNGG | 2 cut(s) | 62, 108 |
| BstV1I | GCAGC | 2 cut(s) | 5, 139 |
| BtsIMutI | CAGTG | 1 cut(s) | 76 |
| CciI | TCATGA | 1 cut(s) | 179 |
| Csp6I | GTAC | 1 cut(s) | 137 |
| CviAII | CATG | 2 cut(s) | 162, 180 |
| CviJI | RGCY | 2 cut(s) | 38, 156 |
| CviKI_1 | RGCY | 2 cut(s) | 38, 156 |
| CviQI | GTAC | 1 cut(s) | 137 |
| EcoRII | CCWGG | 1 cut(s) | 62 |
| FaeI | CATG | 2 cut(s) | 165, 183 |
| FaiI | YATR | 5 cut(s) | 96, 132, 163, 168, 181 |
| FatI | CATG | 2 cut(s) | 161, 179 |
| Fnu4HI | GCNGC | 2 cut(s) | 19, 128 |
| Fsp4HI | GCNGC | 2 cut(s) | 19, 128 |
| GluI | GCNGC | 2 cut(s) | 19, 128 |
| HapII | CCGG | 1 cut(s) | 110 |
| Hin1II | CATG | 2 cut(s) | 165, 183 |
| HpaII | CCGG | 1 cut(s) | 110 |
| HphI | GGTGA | 1 cut(s) | 124 |
| Hpy166II | GTNNAC | 1 cut(s) | 143 |
| Hpy188III | TCNNGA | 1 cut(s) | 180 |
| Hpy8I | GTNNAC | 1 cut(s) | 143 |
| HpyCH4III | ACNGT | 1 cut(s) | 71 |
| HpyCH4IV | ACGT | 1 cut(s) | 139 |
| HpyCH4V | TGCA | 2 cut(s) | 21, 170 |
| HpySE526I | ACGT | 1 cut(s) | 139 |
| Hsp92II | CATG | 2 cut(s) | 165, 183 |
| LpnPI | CCDG | 4 cut(s) | 27, 49, 76, 123 |
| Lsp1109I | GCAGC | 2 cut(s) | 5, 139 |
| LweI | GCATC | 1 cut(s) | 163 |
| MaeII | ACGT | 1 cut(s) | 139 |
| MspI | CCGG | 1 cut(s) | 110 |
| MspR9I | CCNGG | 2 cut(s) | 64, 110 |
| MvaI | CCWGG | 1 cut(s) | 64 |
| NciI | CCSGG | 1 cut(s) | 110 |
| NlaIII | CATG | 2 cut(s) | 165, 183 |
| NlaIV | GGNNCC | 1 cut(s) | 54 |
| PagI | TCATGA | 1 cut(s) | 179 |
| Pfl23II | CGTACG | 1 cut(s) | 136 |
| PfoI | TCCNGGA | 1 cut(s) | 62 |
| PkrI | GCNGC | 2 cut(s) | 20, 129 |
| Ppu21I | YACGTR | 1 cut(s) | 140 |
| Psp6I | CCWGG | 1 cut(s) | 62 |
| PspGI | CCWGG | 1 cut(s) | 62 |
| PspLI | CGTACG | 1 cut(s) | 136 |
| PspN4I | GGNNCC | 1 cut(s) | 54 |
| RsaI | GTAC | 1 cut(s) | 138 |
| RsaNI | GTAC | 1 cut(s) | 137 |
| SatI | GCNGC | 2 cut(s) | 19, 128 |
| ScrFI | CCNGG | 2 cut(s) | 64, 110 |
| SetI | ASST | 2 cut(s) | 142, 158 |
| SfaNI | GCATC | 1 cut(s) | 163 |
| SgeI | CNNG | 9 cut(s) | 54, 75, 76, 98, 115, 121, 122, 152, 174 |
| StyD4I | CCNGG | 2 cut(s) | 62, 108 |
| TaaI | ACNGT | 1 cut(s) | 71 |
| TaiI | ACGT | 1 cut(s) | 142 |
| TscAI | CASTG | 1 cut(s) | 76 |
| TseI | GCWGC | 2 cut(s) | 18, 127 |
| TspDTI | ATGAA | 1 cut(s) | 168 |
| TspRI | CASTG | 1 cut(s) | 76 |