Late embryogenesis abundant protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G01080 |
| fragaria_vesca | FvH4_5g29780 |
| malus_domestica | MD08G1227400.v1.1 MD15G1282800.v1.1 MD15G1419800.v1.1 |
| prunus_persica | Prupe.1G564500_v2.0.a1 Prupe.1G564500_v2.0.a1 |
| pyrus_communis | pycom08g19840 pycom15g37260 |
| rosa_chinensis | RchiOBHm_Chr7g0223311 |
| rosa_laevigata | RLG00000001988 RLG00000005097 |
| rosa_multiflora | Rmu_sc0002048.1_g000033 Rmu_sc0005124.1_g000019 |
| rosa_roxburghii | Rroxscaffold_3G00235920 |
| rosa_rugosa | Rorug03G0301200 Rorug07G0216000 |
| rosa_samantha | Rh1CG073700 Rh2AG559200 Rh2CG344100 Rh4DG006000 Rh5BG144700 Rh5DG181500 Rh6BG510000 Rh7AG359700 Rh7BG349600 Rh7CG378100 Rh7DG355000 |
| rosa_wichuraiana | Rw1G025100 Rw7G030570 Rw7G038840 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 51 |
| AcoI | YGGCCR | 1 cut(s) | 87 |
| AluBI | AGCT | 1 cut(s) | 181 |
| AluI | AGCT | 1 cut(s) | 181 |
| AoxI | GGCC | 1 cut(s) | 87 |
| AsuHPI | GGTGA | 2 cut(s) | 6, 41 |
| BanII | GRGCYC | 1 cut(s) | 41 |
| BfaI | CTAG | 1 cut(s) | 23 |
| BmsI | GCATC | 1 cut(s) | 15 |
| BseX3I | CGGCCG | 1 cut(s) | 87 |
| BseYI | CCCAGC | 1 cut(s) | 181 |
| Bsh1285I | CGRYCG | 1 cut(s) | 90 |
| BshFI | GGCC | 1 cut(s) | 89 |
| BsiEI | CGRYCG | 1 cut(s) | 90 |
| BsnI | GGCC | 1 cut(s) | 89 |
| Bsp1286I | GDGCHC | 1 cut(s) | 41 |
| BspACI | CCGC | 1 cut(s) | 51 |
| BspANI | GGCC | 1 cut(s) | 89 |
| BspQI | GCTCTTC | 1 cut(s) | 86 |
| Bst4CI | ACNGT | 1 cut(s) | 29 |
| Bst6I | CTCTTC | 1 cut(s) | 86 |
| BstC8I | GCNNGC | 2 cut(s) | 77, 179 |
| BstDEI | CTNAG | 1 cut(s) | 120 |
| BstMCI | CGRYCG | 1 cut(s) | 90 |
| BstNSI | RCATGY | 1 cut(s) | 79 |
| BstZI | CGGCCG | 1 cut(s) | 87 |
| BsuRI | GGCC | 1 cut(s) | 89 |
| Cac8I | GCNNGC | 2 cut(s) | 77, 179 |
| CviAII | CATG | 1 cut(s) | 76 |
| CviJI | RGCY | 3 cut(s) | 39, 89, 181 |
| CviKI_1 | RGCY | 3 cut(s) | 39, 89, 181 |
| DdeI | CTNAG | 1 cut(s) | 120 |
| EaeI | YGGCCR | 1 cut(s) | 87 |
| EagI | CGGCCG | 1 cut(s) | 87 |
| Eam1104I | CTCTTC | 1 cut(s) | 86 |
| EarI | CTCTTC | 1 cut(s) | 86 |
| EciI | GGCGGA | 1 cut(s) | 40 |
| EclXI | CGGCCG | 1 cut(s) | 87 |
| Eco24I | GRGCYC | 1 cut(s) | 41 |
| Eco52I | CGGCCG | 1 cut(s) | 87 |
| EcoT38I | GRGCYC | 1 cut(s) | 41 |
| FaeI | CATG | 1 cut(s) | 79 |
| FaiI | YATR | 1 cut(s) | 77 |
| FatI | CATG | 1 cut(s) | 75 |
| FriOI | GRGCYC | 1 cut(s) | 41 |
| FspBI | CTAG | 1 cut(s) | 23 |
| GsaI | CCCAGC | 1 cut(s) | 185 |
| HaeIII | GGCC | 1 cut(s) | 89 |
| Hin1II | CATG | 1 cut(s) | 79 |
| HinfI | GANTC | 1 cut(s) | 32 |
| HphI | GGTGA | 2 cut(s) | 6, 41 |
| Hpy188I | TCNGA | 1 cut(s) | 169 |
| Hpy188III | TCNNGA | 2 cut(s) | 23, 135 |
| HpyAV | CCTTC | 1 cut(s) | 103 |
| HpyCH4III | ACNGT | 1 cut(s) | 29 |
| HpyF3I | CTNAG | 1 cut(s) | 120 |
| Hsp92II | CATG | 1 cut(s) | 79 |
| LguI | GCTCTTC | 1 cut(s) | 86 |
| LpnPI | CCDG | 1 cut(s) | 167 |
| LweI | GCATC | 1 cut(s) | 15 |
| MaeI | CTAG | 1 cut(s) | 23 |
| MboII | GAAGA | 2 cut(s) | 73, 137 |
| MhlI | GDGCHC | 1 cut(s) | 41 |
| MnlI | CCTC | 2 cut(s) | 64, 74 |
| MseI | TTAA | 1 cut(s) | 144 |
| MslI | CAYNNNNRTG | 1 cut(s) | 74 |
| NlaIII | CATG | 1 cut(s) | 79 |
| NmeAIII | GCCGAG | 2 cut(s) | 65, 115 |
| NspI | RCATGY | 1 cut(s) | 79 |
| PaeI | GCATGC | 1 cut(s) | 79 |
| PciSI | GCTCTTC | 1 cut(s) | 86 |
| PfeI | GAWTC | 1 cut(s) | 32 |
| PspFI | CCCAGC | 1 cut(s) | 181 |
| RseI | CAYNNNNRTG | 1 cut(s) | 74 |
| SapI | GCTCTTC | 1 cut(s) | 86 |
| SaqAI | TTAA | 1 cut(s) | 144 |
| SduI | GDGCHC | 1 cut(s) | 41 |
| SetI | ASST | 1 cut(s) | 183 |
| SfaNI | GCATC | 1 cut(s) | 15 |
| SgeI | CNNG | 9 cut(s) | 35, 48, 52, 88, 97, 103, 115, 147, 171 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 74 |
| SphI | GCATGC | 1 cut(s) | 79 |
| SsiI | CCGC | 1 cut(s) | 51 |
| SspMI | CTAG | 1 cut(s) | 23 |
| TaaI | ACNGT | 1 cut(s) | 29 |
| TaqI | TCGA | 1 cut(s) | 35 |
| TfiI | GAWTC | 1 cut(s) | 32 |
| Tru1I | TTAA | 1 cut(s) | 144 |
| Tru9I | TTAA | 1 cut(s) | 144 |
| XbaI | TCTAGA | 1 cut(s) | 22 |
| XceI | RCATGY | 1 cut(s) | 79 |
| XspI | CTAG | 1 cut(s) | 23 |