DNA replication ATP-dependent helicase nuclease
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G08840 AT1G08840 AT1G08840 AT1G08840 AT1G08840 |
| fragaria_vesca | FvH4_7g08480 FvH4_7g08480 FvH4_7g08480 FvH4_7g08480 FvH4_7g08480 FvH4_7g08480 FvH4_7g08480 FvH4_7g08480 FvH4_7g08480 |
| malus_domestica | MD02G1227500.v1.1 MD07G1085900.v1.1 |
| prunus_persica | Prupe.2G112200_v2.0.a1 |
| pyrus_communis | pycom02g19640 pycom07g06880 |
| rosa_chinensis | RchiOBHm_Chr1g0343241 RchiOBHm_Chr2g0122951 RchiOBHm_Chr2g0122961 RchiOBHm_Chr2g0122971 |
| rosa_laevigata | RLG00000001782 RLG00000001791 RLG00000018727 RLG00000028987 |
| rosa_multiflora | Rmu_sc0004431.1_g000010 Rmu_sc0006993.1_g000005 |
| rosa_roxburghii | Rroxscaffold_4G00310940 |
| rosa_rugosa | Rorug01G0165900 Rorug01G0165900 |
| rosa_samantha | Rh1AG181600 Rh1BG149800 Rh1CG168400 Rh1DG181700 Rh2AG302300 Rh2BG309700 Rh2BG309800 Rh2DG326400 Rh6BG105000 Rh7BG295700 |
| rosa_wichuraiana | Rw1G015060 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 288 |
| AcuI | CTGAAG | 1 cut(s) | 102 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 238, 252, 253 |
| AjnI | CCWGG | 1 cut(s) | 430 |
| AluBI | AGCT | 4 cut(s) | 182, 205, 335, 391 |
| AluI | AGCT | 4 cut(s) | 182, 205, 335, 391 |
| AlwI | GGATC | 1 cut(s) | 288 |
| ApeKI | GCWGC | 1 cut(s) | 442 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 144, 177 |
| BbvI | GCAGC | 1 cut(s) | 454 |
| BccI | CCATC | 1 cut(s) | 407 |
| BciT130I | CCWGG | 1 cut(s) | 432 |
| BciVI | GTATCC | 1 cut(s) | 145 |
| BfuI | GTATCC | 1 cut(s) | 145 |
| BisI | GCNGC | 1 cut(s) | 443 |
| BlsI | GCNGC | 1 cut(s) | 444 |
| Bme1390I | CCNGG | 1 cut(s) | 432 |
| BmrFI | CCNGG | 1 cut(s) | 432 |
| Bpu10I | CCTNAGC | 1 cut(s) | 461 |
| BsaJI | CCNNGG | 1 cut(s) | 431 |
| BsaWI | WCCGGW | 1 cut(s) | 277 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 54, 84 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 238, 252, 253 |
| BseBI | CCWGG | 1 cut(s) | 432 |
| BseDI | CCNNGG | 1 cut(s) | 431 |
| BseGI | GGATG | 3 cut(s) | 16, 175, 292 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 238, 252, 253 |
| BseXI | GCAGC | 1 cut(s) | 454 |
| BsiSI | CCGG | 1 cut(s) | 278 |
| BslFI | GGGAC | 1 cut(s) | 229 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 238, 252, 253 |
| BsmFI | GGGAC | 1 cut(s) | 229 |
| Bsp143I | GATC | 1 cut(s) | 280 |
| BspHI | TCATGA | 1 cut(s) | 382 |
| BspPI | GGATC | 1 cut(s) | 288 |
| BspQI | GCTCTTC | 1 cut(s) | 189 |
| BssECI | CCNNGG | 1 cut(s) | 431 |
| BssMI | GATC | 1 cut(s) | 280 |
| Bst2UI | CCWGG | 1 cut(s) | 432 |
| Bst4CI | ACNGT | 2 cut(s) | 23, 380 |
| Bst6I | CTCTTC | 2 cut(s) | 189, 260 |
| BstC8I | GCNNGC | 1 cut(s) | 393 |
| BstDEI | CTNAG | 2 cut(s) | 192, 461 |
| BstF5I | GGATG | 3 cut(s) | 16, 175, 292 |
| BstKTI | GATC | 1 cut(s) | 283 |
| BstMBI | GATC | 1 cut(s) | 280 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 188 |
| BstNI | CCWGG | 1 cut(s) | 432 |
| BstSCI | CCNGG | 1 cut(s) | 430 |
| BstV1I | GCAGC | 1 cut(s) | 454 |
| BsuI | GTATCC | 1 cut(s) | 145 |
| BtsCI | GGATG | 3 cut(s) | 16, 175, 292 |
| Cac8I | GCNNGC | 1 cut(s) | 393 |
| CciI | TCATGA | 1 cut(s) | 382 |
| CviAII | CATG | 5 cut(s) | 110, 383, 408, 474, 480 |
| CviJI | RGCY | 5 cut(s) | 182, 205, 335, 391, 430 |
| CviKI_1 | RGCY | 5 cut(s) | 182, 205, 335, 391, 430 |
| DdeI | CTNAG | 2 cut(s) | 192, 461 |
| DpnI | GATC | 1 cut(s) | 282 |
| DpnII | GATC | 1 cut(s) | 280 |
| DraI | TTTAAA | 1 cut(s) | 39 |
| Eam1104I | CTCTTC | 2 cut(s) | 189, 260 |
| EarI | CTCTTC | 2 cut(s) | 189, 260 |
| Eco57I | CTGAAG | 1 cut(s) | 102 |
| EcoRII | CCWGG | 1 cut(s) | 430 |
| FaeI | CATG | 5 cut(s) | 113, 386, 411, 477, 483 |
| FaiI | YATR | 9 cut(s) | 45, 57, 111, 297, 376, 384, 409, 475, 481 |
| FaqI | GGGAC | 1 cut(s) | 229 |
| FatI | CATG | 5 cut(s) | 109, 382, 407, 473, 479 |
| Fnu4HI | GCNGC | 1 cut(s) | 443 |
| FokI | GGATG | 3 cut(s) | 23, 162, 299 |
| Fsp4HI | GCNGC | 1 cut(s) | 443 |
| GluI | GCNGC | 1 cut(s) | 443 |
| HapII | CCGG | 1 cut(s) | 278 |
| Hin1II | CATG | 5 cut(s) | 113, 386, 411, 477, 483 |
| HindIII | AAGCTT | 2 cut(s) | 203, 389 |
| HinfI | GANTC | 2 cut(s) | 172, 346 |
| HpaII | CCGG | 1 cut(s) | 278 |
| Hpy166II | GTNNAC | 1 cut(s) | 26 |
| Hpy188I | TCNGA | 6 cut(s) | 52, 142, 328, 345, 356, 424 |
| Hpy188III | TCNNGA | 2 cut(s) | 284, 383 |
| Hpy8I | GTNNAC | 1 cut(s) | 26 |
| HpyAV | CCTTC | 1 cut(s) | 375 |
| HpyCH4III | ACNGT | 2 cut(s) | 23, 380 |
| HpyCH4V | TGCA | 1 cut(s) | 95 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 188 |
| HpyF3I | CTNAG | 2 cut(s) | 192, 461 |
| Hsp92II | CATG | 5 cut(s) | 113, 386, 411, 477, 483 |
| Kzo9I | GATC | 1 cut(s) | 280 |
| LguI | GCTCTTC | 1 cut(s) | 189 |
| Lsp1109I | GCAGC | 1 cut(s) | 454 |
| MalI | GATC | 1 cut(s) | 282 |
| MboI | GATC | 1 cut(s) | 280 |
| MboII | GAAGA | 4 cut(s) | 17, 95, 176, 277 |
| MluCI | AATT | 2 cut(s) | 30, 133 |
| MlyI | GAGTC | 1 cut(s) | 355 |
| MnlI | CCTC | 4 cut(s) | 94, 148, 261, 432 |
| MseI | TTAA | 3 cut(s) | 38, 207, 273 |
| MslI | CAYNNNNRTG | 2 cut(s) | 114, 478 |
| MspI | CCGG | 1 cut(s) | 278 |
| MspR9I | CCNGG | 1 cut(s) | 432 |
| MvaI | CCWGG | 1 cut(s) | 432 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 188 |
| NdeII | GATC | 1 cut(s) | 280 |
| NlaIII | CATG | 5 cut(s) | 113, 386, 411, 477, 483 |
| PagI | TCATGA | 1 cut(s) | 382 |
| PciSI | GCTCTTC | 1 cut(s) | 189 |
| PfeI | GAWTC | 1 cut(s) | 172 |
| PkrI | GCNGC | 1 cut(s) | 444 |
| PleI | GAGTC | 1 cut(s) | 354 |
| PpsI | GAGTC | 1 cut(s) | 354 |
| Psp6I | CCWGG | 1 cut(s) | 430 |
| PspGI | CCWGG | 1 cut(s) | 430 |
| RseI | CAYNNNNRTG | 2 cut(s) | 114, 478 |
| SapI | GCTCTTC | 1 cut(s) | 189 |
| SaqAI | TTAA | 3 cut(s) | 38, 207, 273 |
| SatI | GCNGC | 1 cut(s) | 443 |
| Sau3AI | GATC | 1 cut(s) | 280 |
| SchI | GAGTC | 1 cut(s) | 355 |
| ScrFI | CCNGG | 1 cut(s) | 432 |
| SetI | ASST | 7 cut(s) | 91, 184, 207, 222, 337, 367, 393 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 114, 478 |
| Sse9I | AATT | 2 cut(s) | 30, 133 |
| StyD4I | CCNGG | 1 cut(s) | 430 |
| TaaI | ACNGT | 2 cut(s) | 23, 380 |
| TaqI | TCGA | 1 cut(s) | 312 |
| TasI | AATT | 2 cut(s) | 30, 133 |
| TfiI | GAWTC | 1 cut(s) | 172 |
| Tru1I | TTAA | 3 cut(s) | 38, 207, 273 |
| Tru9I | TTAA | 3 cut(s) | 38, 207, 273 |
| TseI | GCWGC | 1 cut(s) | 442 |
| TspDTI | ATGAA | 1 cut(s) | 396 |