Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0002244

Physical Location & Seq

Genomic Coordinates Reverse (-)

27865355 .. 27871109

Gene Structure 5755 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG295700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1971 bp

ATGGCTCCTAGAAAGAAACCCAATTCTTCTTCTTCTACTACCGCTTCGTCTCGGAAATCGAACTCGAAAGCTCAGCCTCAGCCTTCCAAGTTCAGCATCCAACATTTCTTTGAGCGCCACACCCAGAACTCTCAAAACCCCCAAACCACCACCTCGTCCACTCCTCACAACCCTAGGCCCCCAATCCCCGACTCTTCCACCGCCATTGTTCCGCAGAAATCGATTCCGGAGATCCAAAACCCTGCCCCGACTGCGAATCACGCCGATTCTGGAAATCCCGAGAATCGGCGTGATTCGCAGTCGAGTAATAAGAACAGTACGCAGGAGACACCAACTGAGAATTTGGTGGCGGTGAGGTTTATGGATGCGGAGCCGAATGTGGATGAGGAGGTCTCACCGGAGGTTTCGAAGTCTAAGTCTGTCAAGCGATTCAAGTTCTCCCCTGGAATGAATGCTGCTTCTTCACCCTCAAAATATGCAGATTGCACACTAAGATGTGGTGACCATGTGATAATTAGCAGTGAATCTGGTCATCTAGCTGTTGCAAGGGGGGTTATAACAGATATAAGTCACTCCCATGTTTCTGTTTCTTTTTCTAAGAAGTTACGACTTCCTGGGGGCAATCCTTCTTCAGAGGCAAGTGATCTTGATCGGGAGGTCTGGCGGGTTGACAAAGATGAATTTATGACATCATTTGCCACAATGAGGTTCAACCTTCTTCAACTTTTTCTTCCGGGTGCCCAAACTGCTCATCTGAGAAAAATGATCGTTGACCTAGAGGCTCCTAGGTTTGACAGTGGATGTATTACGTTCAGCCAGGATCCAGCAATATCCTATGTTTGGTCCCAAAGAAATTTAAATGATGATCAGCGTCGTGCCATTCTAAAGATACTTACAGCGAAGGACTACGCTCTTATTCTAGGAATGCCTGGAACAGGCAAGACATCTACTATGGTGCATGCTGTGAAAGCCTTGTTGATGCGAGGTGCATCAAATTTGCTTACCTCCTACACAAATTCTGCTGTTGATAATCTACGTATCAAATTAAAAGCTCAGAATATAGACTTTGTGCGCATTGGAAGACAGGAAGTTGTGCATGAAGAAGTTCGAGGGCATTGCCTTTCAGCAATGAACATACAAAGTGTGGAAGACATTAAGTCAAGATTGGACCAAGTCAAGGTGGTTGCTGTTACATGCTTGGGGATCACTAGTCCCTTGCTTGCCAACAAGAAATTTGACGTATGCATCATGGATGAAGCTGGACAGACCACCCTTCCAGTATCTCTCGGGCCTTTGATGTTTGCTTCAATATTTGTCCTGGTTGGTGATCATTATCAATTGCCTCCTCTGGTGAAGAGTACAGAGGCCCGAGAAAATGGAATGGGGGTAAGCTTGTTTTGCAGGCTCTCAGAAGCGCATCCTCAGGCAATTTCAGCATTGCAAAGCCAGTACCGTATGTGTCAAGGCATTATGGAACTGTCAAATGCCTTGATATATGGTGACAGATTGCGTTGTGGATCTCCTGAAATAGCCAATGCCAAACTCAACTTTTCAAGTTCGAAGTCTCATTCATTGTGGATAAAGGAGGTTTTAAATCCAAGCAAACCAGTTATATTTATTAATACAGATGCTTTACCTGCTTTCGAGGCAAAGGACCACAAGATTGTGAATAACCCGATGGAAGCTCACATAGTTGTAGAGGTCGTGGAGGAATTAGTTAACAGTGGAATTGAAGGGGATGATATTGGCATCATTACCCCGTATAACTCCCAGGCAGAGATCATTCGGCTTGCCATCAACCTTACTTCGGTGGAGATACATACCATTGACAAATACCAGGGAAGAGATAAAGATTGCATACTAGTCTCCTTTGTTAGGTCAACTGCAAATCCACGAAACTGCTCGTCCTCTCTGCTCGGAGACTGGCATAGGATTAATGTGGCTCTAACTCGTGCCAAGGTAAGACTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03030 map03030

Pfam Domains

Protein Families

AAA_11 AAA_12 Cas_Cas4 Dna2

Protein Analysis

656

Amino Acids

72.16

Weight (kDa)

8.62

Isoelectric Point (pI)

44.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA_11	PF13086	285 - 377	1.5e-15	AAA domain
AAA_30	PF13604	286 - 449	3.4e-09	AAA domain
AAA_19	PF13245	290 - 449	2.9e-07	AAA domain
AAA_11	PF13086	386 - 453	2.7e-16	AAA domain
AAA_12	PF13087	462 - 655	3e-50	AAA domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002244)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G08840 AT1G08840 AT1G08840 AT1G08840 AT1G08840
fragaria_vesca	FvH4_7g08480 FvH4_7g08480 FvH4_7g08480 FvH4_7g08480 FvH4_7g08480 FvH4_7g08480 FvH4_7g08480 FvH4_7g08480 FvH4_7g08480
malus_domestica	MD02G1227500.v1.1 MD07G1085900.v1.1
prunus_persica	Prupe.2G112200_v2.0.a1
pyrus_communis	pycom02g19640 pycom07g06880
rosa_chinensis	RchiOBHm_Chr1g0343241 RchiOBHm_Chr2g0122951 RchiOBHm_Chr2g0122961 RchiOBHm_Chr2g0122971
rosa_laevigata	RLG00000001782 RLG00000001791 RLG00000018727 RLG00000028987
rosa_multiflora	Rmu_sc0004431.1_g000010 Rmu_sc0006993.1_g000005
rosa_roxburghii	Rroxscaffold_4G00310940
rosa_rugosa	Rorug01G0165900 Rorug01G0165900
rosa_samantha	Rh1AG181600 Rh1BG149800 Rh1CG168400 Rh1DG181700 Rh2AG302300 Rh2BG309700 Rh2BG309800 Rh2DG326400 Rh6BG105000 Rh7BG295700
rosa_wichuraiana	Rw1G015060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	557
Acc16I	TGCGCA	1 cut(s)	1073
Acc36I	ACCTGC	1 cut(s)	1645
AccB1I	GGYRCC	1 cut(s)	737
AccIII	TCCGGA	1 cut(s)	226
AciI	CCGC	6 cut(s)	42, 201, 212, 350, 368, 664
AclWI	GGATC	5 cut(s)	226, 815, 828, 1211, 1525
AcsI	RAATTY	6 cut(s)	340, 680, 853, 994, 1015, 1232
AcuI	CTGAAG	1 cut(s)	615
AfaI	GTAC	3 cut(s)	319, 1360, 1451
AfiI	CCNNNNNNNGG	7 cut(s)	285, 705, 840, 935, 1177, 1807, 1875
AgsI	TTSAA	6 cut(s)	433, 712, 722, 1308, 1554, 1733
AhdI	GACNNNNNGTC	1 cut(s)	1156
AhlI	ACTAGT	2 cut(s)	1208, 1861
AjnI	CCWGG	7 cut(s)	442, 613, 816, 928, 1317, 1770, 1836
AluBI	AGCT	6 cut(s)	71, 539, 1052, 1259, 1392, 1685
AluI	AGCT	6 cut(s)	71, 539, 1052, 1259, 1392, 1685
Alw26I	GTCTC	6 cut(s)	54, 320, 397, 1569, 1870, 1914
AlwI	GGATC	5 cut(s)	226, 815, 828, 1211, 1525
Ama87I	CYCGRG	3 cut(s)	278, 1286, 1368
Aor13HI	TCCGGA	1 cut(s)	226
AoxI	GGCC	3 cut(s)	176, 1289, 1365
ApeKI	GCWGC	1 cut(s)	455
ApoI	RAATTY	6 cut(s)	340, 680, 853, 994, 1015, 1232
ArsI	GACNNNNNNTTYG	2 cut(s)	401, 433
AseI	ATTAAT	2 cut(s)	1620, 1935
Asp700I	GAANNNNTTC	1 cut(s)	1104
AspA2I	CCTAGG	2 cut(s)	173, 785
AspLEI	GCGC	3 cut(s)	117, 1074, 1417
AspS9I	GGNCC	6 cut(s)	177, 843, 1168, 1289, 1366, 1654
AsuC2I	CCSGG	1 cut(s)	735
AsuHPI	GGTGA	7 cut(s)	364, 387, 456, 512, 1337, 1363, 1511
AsuII	TTCGAA	2 cut(s)	407, 1559
AvaI	CYCGRG	3 cut(s)	278, 1286, 1368
AvaII	GGWCC	3 cut(s)	843, 1168, 1654
AvrII	CCTAGG	2 cut(s)	173, 785
AxyI	CCTNAGG	1 cut(s)	1422
BaeGI	GKGCMC	1 cut(s)	742
BamHI	GGATCC	1 cut(s)	820
BanI	GGYRCC	1 cut(s)	737
BauI	CACGAG	1 cut(s)	1950
BbsI	GAAGAC	2 cut(s)	1087, 1155
BbvCI	CCTCAGC	1 cut(s)	78
BbvI	GCAGC	1 cut(s)	442
BccI	CCATC	2 cut(s)	1672, 1802
BcgI	CGANNNNNNTGC	2 cut(s)	1098, 1132
BciT130I	CCWGG	7 cut(s)	444, 615, 818, 930, 1319, 1772, 1838
BclI	TGATCA	2 cut(s)	865, 1327
BcnI	CCSGG	1 cut(s)	735
BcoDI	GTCTC	6 cut(s)	54, 320, 397, 1569, 1870, 1914
BcuI	ACTAGT	2 cut(s)	1208, 1861
BfaI	CTAG	8 cut(s)	9, 174, 536, 776, 786, 920, 1209, 1862
BfoI	RGCGCY	1 cut(s)	118
BfuAI	ACCTGC	1 cut(s)	1645
BisI	GCNGC	1 cut(s)	456
BlnI	CCTAGG	2 cut(s)	173, 785
BlpI	GCTNAGC	1 cut(s)	72
BlsI	GCNGC	1 cut(s)	457
Bme1390I	CCNGG	8 cut(s)	444, 615, 735, 818, 930, 1319, 1772, 1838
Bme18I	GGWCC	3 cut(s)	843, 1168, 1654
BmeRI	GACNNNNNGTC	1 cut(s)	1156
BmeT110I	CYCGRG	3 cut(s)	278, 1286, 1368
BmgT120I	GGNCC	6 cut(s)	177, 843, 1168, 1289, 1366, 1654
BmiI	GGNNCC	7 cut(s)	6, 179, 372, 739, 783, 822, 845
BmrFI	CCNGG	8 cut(s)	444, 615, 735, 818, 930, 1319, 1772, 1838
BmsI	GCATC	8 cut(s)	105, 355, 969, 998, 1254, 1426, 1618, 1758
BpiI	GAAGAC	2 cut(s)	1087, 1155
BplI	GAGNNNNNCTC	2 cut(s)	377, 409
Bpu10I	CCTNAGC	1 cut(s)	78
Bpu1102I	GCTNAGC	1 cut(s)	72
Bpu14I	TTCGAA	2 cut(s)	407, 1559
BpuMI	CCSGG	1 cut(s)	735
Bsa29I	ATCGAT	1 cut(s)	221
BsaAI	YACGTR	1 cut(s)	1037
BsaBI	GATNNNNATC	2 cut(s)	648, 1332
BsaI	GGTCTC	1 cut(s)	397
BsaJI	CCNNGG	7 cut(s)	173, 442, 614, 785, 1770, 1837, 1956
BsaWI	WCCGGW	2 cut(s)	226, 397
Bsc4I	CCNNNNNNNGG	7 cut(s)	285, 705, 840, 935, 1177, 1807, 1875
Bse1I	ACTGG	4 cut(s)	1277, 1447, 1607, 1928
Bse21I	CCTNAGG	1 cut(s)	1422
Bse3DI	GCAATG	3 cut(s)	1114, 1134, 1436
Bse8I	GATNNNNATC	2 cut(s)	648, 1332
BseAI	TCCGGA	1 cut(s)	226
BseBI	CCWGG	7 cut(s)	444, 615, 818, 930, 1319, 1772, 1838
BseCI	ATCGAT	1 cut(s)	221
BseDI	CCNNGG	7 cut(s)	173, 442, 614, 785, 1770, 1837, 1956
BseGI	GGATG	7 cut(s)	96, 370, 388, 806, 1258, 1417, 1744
BseJI	GATNNNNATC	2 cut(s)	648, 1332
BseLI	CCNNNNNNNGG	7 cut(s)	285, 705, 840, 935, 1177, 1807, 1875
BseMI	GCAATG	3 cut(s)	1114, 1134, 1436
BseMII	CTCAG	7 cut(s)	86, 92, 327, 746, 1067, 1422, 1436
BseNI	ACTGG	4 cut(s)	1277, 1447, 1607, 1928
BseRI	GAGGAG	3 cut(s)	153, 401, 1335
BseSI	GKGCMC	1 cut(s)	742
BseXI	GCAGC	1 cut(s)	442
BshFI	GGCC	3 cut(s)	178, 1291, 1367
BshNI	GGYRCC	1 cut(s)	737
BshVI	ATCGAT	1 cut(s)	221
BsiHKCI	CYCGRG	3 cut(s)	278, 1286, 1368
BsiSI	CCGG	3 cut(s)	227, 398, 734
BslFI	GGGAC	2 cut(s)	829, 1197
BslI	CCNNNNNNNGG	7 cut(s)	285, 705, 840, 935, 1177, 1807, 1875
BsmAI	GTCTC	6 cut(s)	54, 320, 397, 1569, 1870, 1914
BsmBI	CGTCTC	1 cut(s)	54
BsmFI	GGGAC	2 cut(s)	829, 1197
BsmI	GAATGC	2 cut(s)	457, 930
BsnI	GGCC	3 cut(s)	178, 1291, 1367
Bso31I	GGTCTC	1 cut(s)	397
BsoBI	CYCGRG	3 cut(s)	278, 1286, 1368
Bsp119I	TTCGAA	2 cut(s)	407, 1559
Bsp1286I	GDGCHC	1 cut(s)	742
Bsp13I	TCCGGA	1 cut(s)	226
Bsp1720I	GCTNAGC	1 cut(s)	72
BspACI	CCGC	6 cut(s)	42, 201, 212, 350, 368, 664
BspANI	GGCC	3 cut(s)	178, 1291, 1367
BspCNI	CTCAG	7 cut(s)	85, 91, 328, 747, 1066, 1421, 1435
BspDI	ATCGAT	1 cut(s)	221
BspEI	TCCGGA	1 cut(s)	226
BspLI	GGNNCC	7 cut(s)	6, 179, 372, 739, 783, 822, 845
BspMI	ACCTGC	1 cut(s)	1645
BspPI	GGATC	5 cut(s)	226, 815, 828, 1211, 1525
BspT104I	TTCGAA	2 cut(s)	407, 1559
BspT107I	GGYRCC	1 cut(s)	737
BspTNI	GGTCTC	1 cut(s)	397
BsrDI	GCAATG	3 cut(s)	1114, 1134, 1436
BsrI	ACTGG	4 cut(s)	1277, 1447, 1607, 1928
BssECI	CCNNGG	7 cut(s)	173, 442, 614, 785, 1770, 1837, 1956
BssSI	CACGAG	1 cut(s)	1950
BssT1I	CCWWGG	3 cut(s)	173, 785, 1956
Bst2BI	CACGAG	1 cut(s)	1950
Bst2UI	CCWGG	7 cut(s)	444, 615, 818, 930, 1319, 1772, 1838
Bst4CI	ACNGT	5 cut(s)	317, 797, 1454, 1479, 1724
Bst6I	CTCTTC	3 cut(s)	199, 1349, 1837
BstBAI	YACGTR	1 cut(s)	1037
BstBI	TTCGAA	2 cut(s)	407, 1559
BstC8I	GCNNGC	4 cut(s)	960, 1221, 1403, 1791
BstEII	GGTNACC	1 cut(s)	500
BstENI	CCTNNNNNAGG	2 cut(s)	933, 1873
BstF5I	GGATG	7 cut(s)	96, 370, 388, 806, 1258, 1417, 1744
BstH2I	RGCGCY	1 cut(s)	118
BstHHI	GCGC	3 cut(s)	117, 1074, 1417
BstMAI	GTCTC	6 cut(s)	54, 320, 397, 1569, 1870, 1914
BstMWI	GCNNNNNNNGC	9 cut(s)	251, 260, 295, 746, 968, 1398, 1433, 1637, 1646
BstNI	CCWGG	7 cut(s)	444, 615, 818, 930, 1319, 1772, 1838
BstNSI	RCATGY	2 cut(s)	962, 1197
BstPI	GGTNACC	1 cut(s)	500
BstSCI	CCNGG	8 cut(s)	442, 613, 733, 816, 928, 1317, 1770, 1836
BstSLI	GKGCMC	1 cut(s)	742
BstSNI	TACGTA	1 cut(s)	1037
BstV1I	GCAGC	1 cut(s)	442
BstV2I	GAAGAC	2 cut(s)	1087, 1155
BstX2I	RGATCY	3 cut(s)	231, 820, 1517
BstYI	RGATCY	3 cut(s)	231, 820, 1517
Bsu15I	ATCGAT	1 cut(s)	221
Bsu36I	CCTNAGG	1 cut(s)	1422
BsuRI	GGCC	3 cut(s)	178, 1291, 1367
BsuTUI	ATCGAT	1 cut(s)	221
BtsCI	GGATG	7 cut(s)	96, 370, 388, 806, 1258, 1417, 1744
BtsI	GCAGTG	1 cut(s)	526
BtsIMutI	CAGTG	3 cut(s)	526, 802, 1729
BveI	ACCTGC	1 cut(s)	1645
Cac8I	GCNNGC	4 cut(s)	960, 1221, 1403, 1791
CfoI	GCGC	3 cut(s)	117, 1074, 1417
Cfr13I	GGNCC	6 cut(s)	177, 843, 1168, 1289, 1366, 1654
ClaI	ATCGAT	1 cut(s)	221
CseI	GACGC	1 cut(s)	860
Csp6I	GTAC	3 cut(s)	318, 1359, 1450
CspCI	CAANNNNNGTGG	2 cut(s)	187, 222
CviAII	CATG	6 cut(s)	506, 578, 959, 1097, 1194, 1249
CviQI	GTAC	3 cut(s)	318, 1359, 1450
DraI	TTTAAA	2 cut(s)	858, 1593
DriI	GACNNNNNGTC	1 cut(s)	1156
Eam1104I	CTCTTC	3 cut(s)	199, 1349, 1837
Eam1105I	GACNNNNNGTC	1 cut(s)	1156
EarI	CTCTTC	3 cut(s)	199, 1349, 1837
Eco105I	TACGTA	1 cut(s)	1037
Eco130I	CCWWGG	3 cut(s)	173, 785, 1956
Eco31I	GGTCTC	1 cut(s)	397
Eco47I	GGWCC	3 cut(s)	843, 1168, 1654
Eco57I	CTGAAG	1 cut(s)	615
Eco81I	CCTNAGG	1 cut(s)	1422
Eco88I	CYCGRG	3 cut(s)	278, 1286, 1368
Eco91I	GGTNACC	1 cut(s)	500
EcoNI	CCTNNNNNAGG	2 cut(s)	933, 1873
EcoO109I	RGGNCCY	1 cut(s)	177
EcoO65I	GGTNACC	1 cut(s)	500
EcoRII	CCWGG	7 cut(s)	442, 613, 816, 928, 1317, 1770, 1836
EcoT14I	CCWWGG	3 cut(s)	173, 785, 1956
EcoT22I	ATGCAT	1 cut(s)	1247
ErhI	CCWWGG	3 cut(s)	173, 785, 1956
Esp3I	CGTCTC	1 cut(s)	54
FaeI	CATG	6 cut(s)	509, 581, 962, 1100, 1197, 1252
FaqI	GGGAC	2 cut(s)	829, 1197
FatI	CATG	6 cut(s)	505, 577, 958, 1096, 1193, 1248
FauI	CCCGC	1 cut(s)	657
FbaI	TGATCA	2 cut(s)	865, 1327
Fnu4HI	GCNGC	1 cut(s)	456
FokI	GGATG	7 cut(s)	83, 377, 395, 813, 1265, 1404, 1751
Fsp4HI	GCNGC	1 cut(s)	456
FspAI	RTGCGCAY	1 cut(s)	1073
FspBI	CTAG	8 cut(s)	9, 174, 536, 776, 786, 920, 1209, 1862
FspI	TGCGCA	1 cut(s)	1073
GlaI	GCGC	3 cut(s)	116, 1073, 1416
GluI	GCNGC	1 cut(s)	456
HaeII	RGCGCY	1 cut(s)	118
HaeIII	GGCC	3 cut(s)	178, 1291, 1367
HapII	CCGG	3 cut(s)	227, 398, 734
HgaI	GACGC	1 cut(s)	860
HhaI	GCGC	3 cut(s)	117, 1074, 1417
Hin1II	CATG	6 cut(s)	509, 581, 962, 1100, 1197, 1252
Hin6I	GCGC	3 cut(s)	115, 1072, 1415
HinP1I	GCGC	3 cut(s)	115, 1072, 1415
HincII	GTYRAC	4 cut(s)	670, 772, 1720, 1881
HindII	GTYRAC	4 cut(s)	670, 772, 1720, 1881
HindIII	AAGCTT	1 cut(s)	1390
HinfI	GANTC	8 cut(s)	191, 223, 256, 266, 283, 293, 429, 524
HpaI	GTTAAC	1 cut(s)	1720
HpaII	CCGG	3 cut(s)	227, 398, 734
HphI	GGTGA	7 cut(s)	364, 387, 456, 512, 1337, 1363, 1511
Hpy166II	GTNNAC	5 cut(s)	159, 670, 772, 1720, 1881
Hpy188I	TCNGA	6 cut(s)	54, 634, 756, 1056, 1411, 1919
Hpy188III	TCNNGA	7 cut(s)	227, 270, 278, 647, 653, 1161, 1523
Hpy8I	GTNNAC	5 cut(s)	159, 670, 772, 1720, 1881
Hpy99I	CGWCG	1 cut(s)	876
HpyAV	CCTTC	6 cut(s)	93, 636, 725, 895, 1283, 1727
HpyCH4III	ACNGT	5 cut(s)	317, 797, 1454, 1479, 1724
HpyCH4IV	ACGT	3 cut(s)	809, 1036, 1239
HpyF10VI	GCNNNNNNNGC	9 cut(s)	251, 260, 295, 746, 968, 1398, 1433, 1637, 1646
HpySE526I	ACGT	3 cut(s)	809, 1036, 1239
Hsp92II	CATG	6 cut(s)	509, 581, 962, 1100, 1197, 1252
HspAI	GCGC	3 cut(s)	115, 1072, 1415
Kpn2I	TCCGGA	1 cut(s)	226
Ksp22I	TGATCA	2 cut(s)	865, 1327
KspAI	GTTAAC	1 cut(s)	1720
LmnI	GCTCC	3 cut(s)	10, 370, 787
Lsp1109I	GCAGC	1 cut(s)	442
LweI	GCATC	8 cut(s)	105, 355, 969, 998, 1254, 1426, 1618, 1758
MaeI	CTAG	8 cut(s)	9, 174, 536, 776, 786, 920, 1209, 1862
MaeII	ACGT	3 cut(s)	809, 1036, 1239
MaeIII	GTNAC	5 cut(s)	500, 569, 603, 1189, 1499
MfeI	CAATTG	1 cut(s)	1337
MflI	RGATCY	3 cut(s)	231, 820, 1517
MhlI	GDGCHC	1 cut(s)	742
MlyI	GAGTC	1 cut(s)	185
MmeI	TCCRAC	1 cut(s)	124
Mph1103I	ATGCAT	1 cut(s)	1247
MroI	TCCGGA	1 cut(s)	226
MroXI	GAANNNNTTC	1 cut(s)	1104
MseI	TTAA	7 cut(s)	857, 1046, 1155, 1592, 1620, 1719, 1935
MslI	CAYNNNNRTG	2 cut(s)	493, 576
MspI	CCGG	3 cut(s)	227, 398, 734
MspR9I	CCNGG	8 cut(s)	444, 615, 735, 818, 930, 1319, 1772, 1838
MunI	CAATTG	1 cut(s)	1337
Mva1269I	GAATGC	2 cut(s)	457, 930
MvaI	CCWGG	7 cut(s)	444, 615, 818, 930, 1319, 1772, 1838
MwoI	GCNNNNNNNGC	9 cut(s)	251, 260, 295, 746, 968, 1398, 1433, 1637, 1646
NciI	CCSGG	1 cut(s)	735
NlaIII	CATG	6 cut(s)	509, 581, 962, 1100, 1197, 1252
NlaIV	GGNNCC	7 cut(s)	6, 179, 372, 739, 783, 822, 845
NmuCI	GTSAC	3 cut(s)	500, 569, 1499
NsbI	TGCGCA	1 cut(s)	1073
NsiI	ATGCAT	1 cut(s)	1247
NspI	RCATGY	2 cut(s)	962, 1197
NspV	TTCGAA	2 cut(s)	407, 1559
PaeI	GCATGC	1 cut(s)	962
PctI	GAATGC	2 cut(s)	457, 930
PdmI	GAANNNNTTC	1 cut(s)	1104
PfeI	GAWTC	7 cut(s)	223, 256, 266, 283, 293, 429, 524
PflFI	GACNNNGTC	1 cut(s)	1172
PkrI	GCNGC	1 cut(s)	457
PleI	GAGTC	1 cut(s)	185
PpsI	GAGTC	1 cut(s)	185
Ppu21I	YACGTR	1 cut(s)	1037
PshBI	ATTAAT	2 cut(s)	1620, 1935
PsiI	TTATAA	1 cut(s)	557
Psp6I	CCWGG	7 cut(s)	442, 613, 816, 928, 1317, 1770, 1836
PspEI	GGTNACC	1 cut(s)	500
PspGI	CCWGG	7 cut(s)	442, 613, 816, 928, 1317, 1770, 1836
PspN4I	GGNNCC	7 cut(s)	6, 179, 372, 739, 783, 822, 845
PspPI	GGNCC	6 cut(s)	177, 843, 1168, 1289, 1366, 1654
PsuI	RGATCY	3 cut(s)	231, 820, 1517
PsyI	GACNNNGTC	1 cut(s)	1172
RsaI	GTAC	3 cut(s)	319, 1360, 1451
RsaNI	GTAC	3 cut(s)	318, 1359, 1450
RseI	CAYNNNNRTG	2 cut(s)	493, 576
SaqAI	TTAA	7 cut(s)	857, 1046, 1155, 1592, 1620, 1719, 1935
SatI	GCNGC	1 cut(s)	456
Sau96I	GGNCC	6 cut(s)	177, 843, 1168, 1289, 1366, 1654
SchI	GAGTC	1 cut(s)	185
ScrFI	CCNGG	8 cut(s)	444, 615, 735, 818, 930, 1319, 1772, 1838
SduI	GDGCHC	1 cut(s)	742
SfaNI	GCATC	8 cut(s)	105, 355, 969, 998, 1254, 1426, 1618, 1758
SfuI	TTCGAA	2 cut(s)	407, 1559
SinI	GGWCC	3 cut(s)	843, 1168, 1654
SmiI	ATTTAAAT	1 cut(s)	858
SmiMI	CAYNNNNRTG	2 cut(s)	493, 576
SnaBI	TACGTA	1 cut(s)	1037
SpeI	ACTAGT	2 cut(s)	1208, 1861
SphI	GCATGC	1 cut(s)	962
SsiI	CCGC	6 cut(s)	42, 201, 212, 350, 368, 664
SspI	AATATT	1 cut(s)	1311
SspMI	CTAG	8 cut(s)	9, 174, 536, 776, 786, 920, 1209, 1862
StyD4I	CCNGG	8 cut(s)	442, 613, 733, 816, 928, 1317, 1770, 1836
StyI	CCWWGG	3 cut(s)	173, 785, 1956
SwaI	ATTTAAAT	1 cut(s)	858
TaaI	ACNGT	5 cut(s)	317, 797, 1454, 1479, 1724
TaiI	ACGT	3 cut(s)	812, 1039, 1242
TaqI	TCGA	8 cut(s)	59, 65, 221, 302, 407, 1108, 1559, 1644
TatI	WGTACW	1 cut(s)	1358
TfiI	GAWTC	7 cut(s)	223, 256, 266, 283, 293, 429, 524
Tru1I	TTAA	7 cut(s)	857, 1046, 1155, 1592, 1620, 1719, 1935
Tru9I	TTAA	7 cut(s)	857, 1046, 1155, 1592, 1620, 1719, 1935
TscAI	CASTG	3 cut(s)	526, 802, 1729
TseFI	GTSAC	3 cut(s)	500, 569, 1499
TseI	GCWGC	1 cut(s)	455
Tsp45I	GTSAC	3 cut(s)	500, 569, 1499
TspDTI	ATGAA	6 cut(s)	464, 693, 1113, 1145, 1269, 1560
TspRI	CASTG	3 cut(s)	526, 802, 1729
Tth111I	GACNNNGTC	1 cut(s)	1172
VpaK11BI	GGWCC	3 cut(s)	843, 1168, 1654
VspI	ATTAAT	2 cut(s)	1620, 1935
XagI	CCTNNNNNAGG	2 cut(s)	933, 1873
XapI	RAATTY	6 cut(s)	340, 680, 853, 994, 1015, 1232
XceI	RCATGY	2 cut(s)	962, 1197
XmaJI	CCTAGG	2 cut(s)	173, 785
XmnI	GAANNNNTTC	1 cut(s)	1104
XspI	CTAG	8 cut(s)	9, 174, 536, 776, 786, 920, 1209, 1862
Zsp2I	ATGCAT	1 cut(s)	1247

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.