Rh6BG199000

Tryptophan aminotransferase-related protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
Physical Location & Seq
Forward (+)
37508673 .. 37516872
8200 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG199000.1

Sequence Viewer

Length: 1317 bp
ATGGCTAAGCTACAACAAAGCTCCTACGTTGTGTGCCTGGCATTTTCTATAGTTCTAAATCTGTCATTGATATTCAAGCTCTATGGACATGGAGGTCAGTGGGAGCTCAGTTGGAGCAGAAGGGCAGCAGAAGAAGCCGAGTACGTCGCTGCCGTCCCTTGCTCGGGGCATGGCAGAACCTACTTGGATGGCTTGGTTCTTGATGGCAAGCAACCCGCTTGTGAGTGCAATTCTTGCTATGGAGGCTCAGATTGTTCTCAGTTCTTAACTGATTGTGAATCAAATGCTGACGGTGGGGATCCATATTTCTTAGAGCCCTTTTGGATGCAGCATGCTTCTGAAAGTGCAATTCTAGTAGCAGGGTGGCATCGAATGGGCTATACTTTCTCTGATCATGCTTACATCTCACAAGAGCTTGAGAGGCTCATCCGGAAAGTACACGACATTGCTGGTAATGCAGTCACTGAAGGAAGGTACATTGTAATTGGTGCCGGCTCAACCCATCTCATCAATGCCGCAGTTAAAGCGCTCTCTTCCTCATCGACCAATAGTTTCAACCCATCATCATCCTCACCCGCTAGTATTGTTGTTTCAATTCCTTATTACGCGCTTTATGAAGCGCAAACGGAATACTTCCGATCAGTGGATTACAAGTTTGAAGGGGATGGTTCGTTGCTGCAGAACATCACAGATGGAACTAAGAGGGTTATTGAGTTTGTAACCGCACCAAACAATCCTGATGGGAAGCTAAATAAAGCAAATTTTCAAGGACCAAATTCCGAAGCAATCTATGATCGTGTTTATTATTGGCCACATTTCACACCAATTCCAACTCCAGCAAATGACAATGTCATGGTGTTTTCAATCTCCAAGCTCACAGGCCATGCTGGTACAAGATTAGGGTGGGCAGTGATAAAGGATGAGGAAGTGTACCAAAGAATGTTGCAGTATACTCTGACAAGTAACTTGGGTATTTCTCGCGATGCTCAGCTAAGAGCTTTGAAGCTTTTGAAAGTAGTCGTAGAAGGTGGGGGAAAAGAAATTTTCCAATTCGGATACACCACTATGAGGAAACGTTGGGAAAATTTGAGTAACGCCCTGTCTGTGTCAAACCGCTTTTCTCTGCAGAAAGTTGAACCTCAGTACTGCACTTTTTTTCAGAAAATTAGAGGACCATCTCCTGCCTTTGCGTGGGTGAAGTGCGAGAGGGAAGAGGATAAAGATGCTACACAGTCCTCAAAGAAGAAGCTAATGTTTACGGCCGAAGTGGAAGTGTCTTTGGTGCTGAAGATCGATATGTACGTCTCGCCCTCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

438

Amino Acids

48.8

Weight (kDa)

6.17

Isoelectric Point (pI)

41.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EGF_alliinase PF04863 37 - 92 1.1e-28 Alliinase EGF-like domain
Alliinase_C PF04864 95 - 420 1.6e-124 Allinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 93
AccB1I GGYRCC 1 cut(s) 488
AccI GTMKAC 1 cut(s) 950
AccII CGCG 2 cut(s) 608, 981
AccIII TCCGGA 1 cut(s) 429
AciI CCGC 5 cut(s) 216, 516, 576, 723, 1114
AclI AACGTT 1 cut(s) 1075
AclWI GGATC 2 cut(s) 293, 306
AcoI YGGCCR 2 cut(s) 809, 1260
AcsI RAATTY 4 cut(s) 760, 775, 1041, 1084
AcuI CTGAAG 2 cut(s) 486, 1307
AfaI GTAC 7 cut(s) 143, 438, 476, 892, 932, 1145, 1301
AfeI AGCGCT 1 cut(s) 528
AfiI CCNNNNNNNGG 5 cut(s) 163, 164, 643, 1068, 1191
AgsI TTSAA 9 cut(s) 76, 556, 594, 659, 767, 864, 1003, 1012, 1136
AjnI CCWGG 1 cut(s) 36
Alw21I GWGCWC 1 cut(s) 108
Alw26I GTCTC 1 cut(s) 1309
AlwI GGATC 2 cut(s) 293, 306
AlwNI CAGNNNCTG 1 cut(s) 464
Ama87I CYCGRG 1 cut(s) 163
Aor13HI TCCGGA 1 cut(s) 429
Aor51HI AGCGCT 1 cut(s) 528
AoxI GGCC 3 cut(s) 809, 880, 1260
ApeKI GCWGC 4 cut(s) 125, 149, 328, 676
ApoI RAATTY 4 cut(s) 760, 775, 1041, 1084
AspLEI GCGC 3 cut(s) 529, 610, 622
AspS9I GGNCC 2 cut(s) 770, 1172
AsuHPI GGTGA 2 cut(s) 564, 1207
AvaI CYCGRG 1 cut(s) 163
AvaII GGWCC 2 cut(s) 770, 1172
BalI TGGCCA 1 cut(s) 811
BamHI GGATCC 1 cut(s) 298
BanI GGYRCC 1 cut(s) 488
BanII GRGCYC 2 cut(s) 108, 318
Bbv12I GWGCWC 1 cut(s) 108
BbvI GCAGC 4 cut(s) 136, 137, 340, 663
BccI CCATC 8 cut(s) 182, 197, 510, 568, 659, 686, 734, 1183
BceAI ACGGC 2 cut(s) 137, 1275
BciT130I CCWGG 1 cut(s) 38
BciVI GTATCC 1 cut(s) 1049
BclI TGATCA 1 cut(s) 391
BcoDI GTCTC 1 cut(s) 1309
BfaI CTAG 2 cut(s) 353, 579
BfmI CTRYAG 3 cut(s) 48, 677, 1124
BfoI RGCGCY 1 cut(s) 530
BfuI GTATCC 1 cut(s) 1049
BisI GCNGC 5 cut(s) 126, 150, 329, 516, 677
BlpI GCTNAGC 2 cut(s) 6, 987
BlsI GCNGC 5 cut(s) 127, 151, 330, 517, 678
BmcAI AGTACT 1 cut(s) 1145
Bme1390I CCNGG 1 cut(s) 38
Bme18I GGWCC 2 cut(s) 770, 1172
BmeT110I CYCGRG 1 cut(s) 163
BmgT120I GGNCC 2 cut(s) 770, 1172
BmiI GGNNCC 2 cut(s) 300, 490
BmrFI CCNGG 1 cut(s) 38
BmsI GCATC 4 cut(s) 315, 376, 973, 1213
BpmI CTGGAG 1 cut(s) 819
Bpu1102I GCTNAGC 2 cut(s) 6, 987
BpuEI CTTGAG 1 cut(s) 437
Bsa29I ATCGAT 1 cut(s) 1293
BsaWI WCCGGW 1 cut(s) 429
Bsc4I CCNNNNNNNGG 5 cut(s) 163, 164, 643, 1068, 1191
Bse118I RCCGGY 1 cut(s) 491
Bse3DI GCAATG 1 cut(s) 444
BseAI TCCGGA 1 cut(s) 429
BseBI CCWGG 1 cut(s) 38
BseCI ATCGAT 1 cut(s) 1293
BseGI GGATG 6 cut(s) 193, 330, 426, 566, 670, 925
BseLI CCNNNNNNNGG 5 cut(s) 163, 164, 643, 1068, 1191
BseMI GCAATG 1 cut(s) 444
BseMII CTCAG 5 cut(s) 121, 261, 272, 1001, 1154
BseX3I CGGCCG 1 cut(s) 1260
BseXI GCAGC 4 cut(s) 136, 137, 340, 663
BsgI GTGCAG 1 cut(s) 1132
Bsh1236I CGCG 2 cut(s) 608, 981
Bsh1285I CGRYCG 1 cut(s) 1263
BshFI GGCC 3 cut(s) 811, 882, 1262
BshNI GGYRCC 1 cut(s) 488
BshVI ATCGAT 1 cut(s) 1293
BsiEI CGRYCG 1 cut(s) 1263
BsiHKAI GWGCWC 1 cut(s) 108
BsiHKCI CYCGRG 1 cut(s) 163
BsiSI CCGG 2 cut(s) 430, 492
BslFI GGGAC 1 cut(s) 140
BslI CCNNNNNNNGG 5 cut(s) 163, 164, 643, 1068, 1191
BsmAI GTCTC 1 cut(s) 1309
BsmBI CGTCTC 1 cut(s) 1309
BsmFI GGGAC 1 cut(s) 140
BsnI GGCC 3 cut(s) 811, 882, 1262
BsoBI CYCGRG 1 cut(s) 163
Bsp1286I GDGCHC 2 cut(s) 108, 318
Bsp13I TCCGGA 1 cut(s) 429
Bsp143I GATC 5 cut(s) 298, 391, 638, 793, 1290
Bsp1720I GCTNAGC 2 cut(s) 6, 987
Bsp68I TCGCGA 1 cut(s) 981
BspACI CCGC 5 cut(s) 216, 516, 576, 723, 1114
BspANI GGCC 3 cut(s) 811, 882, 1262
BspCNI CTCAG 5 cut(s) 120, 260, 271, 1000, 1153
BspDI ATCGAT 1 cut(s) 1293
BspEI TCCGGA 1 cut(s) 429
BspFNI CGCG 2 cut(s) 608, 981
BspLI GGNNCC 2 cut(s) 300, 490
BspMAI CTGCAG 2 cut(s) 681, 1128
BspPI GGATC 2 cut(s) 293, 306
BspT107I GGYRCC 1 cut(s) 488
BsrDI GCAATG 1 cut(s) 444
BsrFI RCCGGY 1 cut(s) 491
BssAI RCCGGY 1 cut(s) 491
BssMI GATC 5 cut(s) 298, 391, 638, 793, 1290
BssNAI GTATAC 1 cut(s) 951
Bst1107I GTATAC 1 cut(s) 951
Bst2UI CCWGG 1 cut(s) 38
Bst4CI ACNGT 2 cut(s) 293, 1233
Bst6I CTCTTC 2 cut(s) 538, 1206
BstAPI GCANNNNNTGC 1 cut(s) 234
BstC8I GCNNGC 3 cut(s) 209, 333, 493
BstDEI CTNAG 9 cut(s) 6, 107, 247, 258, 310, 699, 987, 992, 1140
BstF5I GGATG 6 cut(s) 193, 330, 426, 566, 670, 925
BstFNI CGCG 2 cut(s) 608, 981
BstH2I RGCGCY 1 cut(s) 530
BstHHI GCGC 3 cut(s) 529, 610, 622
BstKTI GATC 5 cut(s) 301, 394, 641, 796, 1293
BstMAI GTCTC 1 cut(s) 1309
BstMBI GATC 5 cut(s) 298, 391, 638, 793, 1290
BstMCI CGRYCG 1 cut(s) 1263
BstMWI GCNNNNNNNGC 6 cut(s) 134, 234, 243, 421, 455, 524
BstNI CCWGG 1 cut(s) 38
BstNSI RCATGY 1 cut(s) 335
BstSCI CCNGG 1 cut(s) 36
BstSFI CTRYAG 3 cut(s) 48, 677, 1124
BstUI CGCG 2 cut(s) 608, 981
BstV1I GCAGC 4 cut(s) 136, 137, 340, 663
BstX2I RGATCY 1 cut(s) 298
BstYI RGATCY 1 cut(s) 298
BstZ17I GTATAC 1 cut(s) 951
BstZI CGGCCG 1 cut(s) 1260
Bsu15I ATCGAT 1 cut(s) 1293
BsuI GTATCC 1 cut(s) 1049
BsuRI GGCC 3 cut(s) 811, 882, 1262
BsuTUI ATCGAT 1 cut(s) 1293
BtgZI GCGATG 1 cut(s) 996
BtsCI GGATG 6 cut(s) 193, 330, 426, 566, 670, 925
BtsI GCAGTG 1 cut(s) 915
BtsIMutI CAGTG 4 cut(s) 104, 462, 648, 915
BtuMI TCGCGA 1 cut(s) 981
Cac8I GCNNGC 3 cut(s) 209, 333, 493
CaiI CAGNNNCTG 1 cut(s) 464
CfoI GCGC 3 cut(s) 529, 610, 622
Cfr10I RCCGGY 1 cut(s) 491
Cfr13I GGNCC 2 cut(s) 770, 1172
ClaI ATCGAT 1 cut(s) 1293
Csp6I GTAC 7 cut(s) 142, 437, 475, 891, 931, 1144, 1300
CviAII CATG 6 cut(s) 89, 170, 332, 395, 853, 884
CviQI GTAC 7 cut(s) 142, 437, 475, 891, 931, 1144, 1300
DdeI CTNAG 9 cut(s) 6, 107, 247, 258, 310, 699, 987, 992, 1140
DpnI GATC 5 cut(s) 300, 393, 640, 795, 1292
DpnII GATC 5 cut(s) 298, 391, 638, 793, 1290
DrdI GACNNNNNNGTC 1 cut(s) 93
DseDI GACNNNNNNGTC 1 cut(s) 93
EaeI YGGCCR 2 cut(s) 809, 1260
EagI CGGCCG 1 cut(s) 1260
Eam1104I CTCTTC 2 cut(s) 538, 1206
EarI CTCTTC 2 cut(s) 538, 1206
Ecl136II GAGCTC 1 cut(s) 106
EclXI CGGCCG 1 cut(s) 1260
Eco24I GRGCYC 2 cut(s) 108, 318
Eco47I GGWCC 2 cut(s) 770, 1172
Eco47III AGCGCT 1 cut(s) 528
Eco52I CGGCCG 1 cut(s) 1260
Eco53kI GAGCTC 1 cut(s) 106
Eco57I CTGAAG 2 cut(s) 486, 1307
Eco88I CYCGRG 1 cut(s) 163
EcoICRI GAGCTC 1 cut(s) 106
EcoRII CCWGG 1 cut(s) 36
EcoT38I GRGCYC 2 cut(s) 108, 318
Esp3I CGTCTC 1 cut(s) 1309
FaeI CATG 6 cut(s) 92, 173, 335, 398, 856, 887
FaqI GGGAC 1 cut(s) 140
FatI CATG 6 cut(s) 88, 169, 331, 394, 852, 883
FauI CCCGC 2 cut(s) 223, 583
FbaI TGATCA 1 cut(s) 391
FblI GTMKAC 1 cut(s) 950
Fnu4HI GCNGC 5 cut(s) 126, 150, 329, 516, 677
FokI GGATG 6 cut(s) 200, 337, 413, 553, 677, 932
FriOI GRGCYC 2 cut(s) 108, 318
Fsp4HI GCNGC 5 cut(s) 126, 150, 329, 516, 677
FspBI CTAG 2 cut(s) 353, 579
GlaI GCGC 3 cut(s) 528, 609, 621
GluI GCNGC 5 cut(s) 126, 150, 329, 516, 677
GsuI CTGGAG 1 cut(s) 819
HaeII RGCGCY 1 cut(s) 530
HaeIII GGCC 3 cut(s) 811, 882, 1262
HapII CCGG 2 cut(s) 430, 492
HhaI GCGC 3 cut(s) 529, 610, 622
Hin1II CATG 6 cut(s) 92, 173, 335, 398, 856, 887
Hin6I GCGC 3 cut(s) 527, 608, 620
HinP1I GCGC 3 cut(s) 527, 608, 620
HindIII AAGCTT 1 cut(s) 1004
HinfI GANTC 1 cut(s) 278
HpaII CCGG 2 cut(s) 430, 492
HphI GGTGA 2 cut(s) 564, 1207
Hpy166II GTNNAC 4 cut(s) 439, 931, 951, 1257
Hpy188I TCNGA 8 cut(s) 250, 340, 391, 638, 781, 957, 1055, 1161
Hpy188III TCNNGA 4 cut(s) 200, 430, 737, 980
Hpy8I GTNNAC 4 cut(s) 439, 931, 951, 1257
Hpy99I CGWCG 1 cut(s) 149
HpyAV CCTTC 5 cut(s) 114, 461, 465, 653, 1019
HpyCH4III ACNGT 2 cut(s) 293, 1233
HpyCH4IV ACGT 4 cut(s) 27, 144, 1075, 1302
HpyCH4V TGCA 8 cut(s) 228, 328, 347, 458, 679, 946, 1126, 1149
HpyF10VI GCNNNNNNNGC 6 cut(s) 134, 234, 243, 421, 455, 524
HpyF3I CTNAG 9 cut(s) 6, 107, 247, 258, 310, 699, 987, 992, 1140
HpySE526I ACGT 4 cut(s) 27, 144, 1075, 1302
Hsp92II CATG 6 cut(s) 92, 173, 335, 398, 856, 887
HspAI GCGC 3 cut(s) 527, 608, 620
Kpn2I TCCGGA 1 cut(s) 429
KroI GCCGGC 1 cut(s) 491
KroNI GCCGGC 1 cut(s) 493
Ksp22I TGATCA 1 cut(s) 391
Kzo9I GATC 5 cut(s) 298, 391, 638, 793, 1290
LmnI GCTCC 3 cut(s) 26, 103, 114
Lsp1109I GCAGC 4 cut(s) 136, 137, 340, 663
LweI GCATC 4 cut(s) 315, 376, 973, 1213
MaeI CTAG 2 cut(s) 353, 579
MaeII ACGT 4 cut(s) 27, 144, 1075, 1302
MaeIII GTNAC 4 cut(s) 460, 718, 962, 1091
MalI GATC 5 cut(s) 300, 393, 640, 795, 1292
MboI GATC 5 cut(s) 298, 391, 638, 793, 1290
MboII GAAGA 5 cut(s) 143, 525, 1223, 1255, 1300
MflI RGATCY 1 cut(s) 298
MhlI GDGCHC 2 cut(s) 108, 318
MlsI TGGCCA 1 cut(s) 811
MluNI TGGCCA 1 cut(s) 811
MmeI TCCRAC 2 cut(s) 92, 854
Mox20I TGGCCA 1 cut(s) 811
MroI TCCGGA 1 cut(s) 429
MroNI GCCGGC 1 cut(s) 491
MscI TGGCCA 1 cut(s) 811
MseI TTAA 2 cut(s) 266, 522
MslI CAYNNNNRTG 1 cut(s) 1064
Msp20I TGGCCA 1 cut(s) 811
MspI CCGG 2 cut(s) 430, 492
MspR9I CCNGG 1 cut(s) 38
MvaI CCWGG 1 cut(s) 38
MvnI CGCG 2 cut(s) 608, 981
MwoI GCNNNNNNNGC 6 cut(s) 134, 234, 243, 421, 455, 524
NaeI GCCGGC 1 cut(s) 493
NdeII GATC 5 cut(s) 298, 391, 638, 793, 1290
NgoMIV GCCGGC 1 cut(s) 491
NlaIII CATG 6 cut(s) 92, 173, 335, 398, 856, 887
NlaIV GGNNCC 2 cut(s) 300, 490
NmeAIII GCCGAG 1 cut(s) 163
NmuCI GTSAC 1 cut(s) 460
NruI TCGCGA 1 cut(s) 981
NspI RCATGY 1 cut(s) 335
PaeI GCATGC 1 cut(s) 335
PcsI WCGNNNNNNNCGW 2 cut(s) 150, 1299
PdiI GCCGGC 1 cut(s) 493
PfeI GAWTC 1 cut(s) 278
PflFI GACNNNGTC 1 cut(s) 848
PkrI GCNGC 5 cut(s) 127, 151, 330, 517, 678
Psp124BI GAGCTC 1 cut(s) 108
Psp1406I AACGTT 1 cut(s) 1075
Psp6I CCWGG 1 cut(s) 36
PspGI CCWGG 1 cut(s) 36
PspN4I GGNNCC 2 cut(s) 300, 490
PspPI GGNCC 2 cut(s) 770, 1172
PstI CTGCAG 2 cut(s) 681, 1128
PstNI CAGNNNCTG 1 cut(s) 464
PsuI RGATCY 1 cut(s) 298
PsyI GACNNNGTC 1 cut(s) 848
RruI TCGCGA 1 cut(s) 981
RsaI GTAC 7 cut(s) 143, 438, 476, 892, 932, 1145, 1301
RsaNI GTAC 7 cut(s) 142, 437, 475, 891, 931, 1144, 1300
RseI CAYNNNNRTG 1 cut(s) 1064
SacI GAGCTC 1 cut(s) 108
SaqAI TTAA 2 cut(s) 266, 522
SatI GCNGC 5 cut(s) 126, 150, 329, 516, 677
Sau3AI GATC 5 cut(s) 298, 391, 638, 793, 1290
Sau96I GGNCC 2 cut(s) 770, 1172
ScaI AGTACT 1 cut(s) 1145
ScrFI CCNGG 1 cut(s) 38
SduI GDGCHC 2 cut(s) 108, 318
SfaNI GCATC 4 cut(s) 315, 376, 973, 1213
SfcI CTRYAG 3 cut(s) 48, 677, 1124
SinI GGWCC 2 cut(s) 770, 1172
SmiMI CAYNNNNRTG 1 cut(s) 1064
SmlI CTYRAG 1 cut(s) 416
SmoI CTYRAG 1 cut(s) 416
SphI GCATGC 1 cut(s) 335
SsiI CCGC 5 cut(s) 216, 516, 576, 723, 1114
SspMI CTAG 2 cut(s) 353, 579
SstI GAGCTC 1 cut(s) 108
StyD4I CCNGG 1 cut(s) 36
TaaI ACNGT 2 cut(s) 293, 1233
TaiI ACGT 4 cut(s) 30, 147, 1078, 1305
TaqI TCGA 3 cut(s) 370, 542, 1293
TatI WGTACW 2 cut(s) 436, 1143
TauI GCSGC 1 cut(s) 518
TfiI GAWTC 1 cut(s) 278
Tru1I TTAA 2 cut(s) 266, 522
Tru9I TTAA 2 cut(s) 266, 522
TscAI CASTG 4 cut(s) 104, 469, 648, 915
TseFI GTSAC 1 cut(s) 460
TseI GCWGC 4 cut(s) 125, 149, 328, 676
Tsp45I GTSAC 1 cut(s) 460
TspDTI ATGAA 1 cut(s) 630
TspGWI ACGGA 1 cut(s) 641
TspRI CASTG 4 cut(s) 104, 469, 648, 915
Tth111I GACNNNGTC 1 cut(s) 848
VpaK11BI GGWCC 2 cut(s) 770, 1172
XapI RAATTY 4 cut(s) 760, 775, 1041, 1084
XceI RCATGY 1 cut(s) 335
XmiI GTMKAC 1 cut(s) 950
XspI CTAG 2 cut(s) 353, 579
ZrmI AGTACT 1 cut(s) 1145
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.