Rh6BG199200

Tryptophan aminotransferase-related protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
Physical Location & Seq
Forward (+)
37537039 .. 37540555
3517 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG199200.1

Sequence Viewer

Length: 1401 bp
ATGGCTAAGCTACAACAAAGCTTCTACGTCGTGTGCCTGGCATTTTCTGTAGTTCTAAATCTGTCGTTGATCTTCAAGCTCTACGGACATGGAGGTCAGTGGGAGCTCAGTTGGAGCAGAAGGGCAGCAGAAGAAGCCGAGGGCGTCGCTGCCATCCCTTGCTCGGGGCATGGCAGAGCCTTCTTGGATGGCTTGGTTCTTGATGGCAAGCAACCTGGTTGTGAGTGCAATTCTTGCTATGGAGGCTCAGATTGCTCTCAGTTCTTTACTGATTGTGAAGCAAATGCTGACAGTGGAGATCCATATTTCTTAGAGCCCTTTTGGATGCAACATGCTTCTGAAAGTGCAATTCTAGTAGCAGGGTGGCATCGAATGGGCTATACTTTCCCTGATCAGGCTTACATCTCACAAGAGCTTGAGAGGCTCATCCGCAAAGTACACGACATTGCTGGTAATGCAGTCACTCAAGGACGGTACATTGTAATTGGTGCTGGCTCAACCCATCTCCTCAACGCTGCAGTTAAAGCGCTCTCTTTCTCATCAACCAGTAGTTTCAACTCATCATCATCCTCACCTGCTAGTGTTGTTGTTTCAATTCCTTTTTACGCGCTTTATGAAACGCAAACGGAATACTTCCGATCATTGGATTACAAGTTCGAAGGGGATGGTTCGTTGCTGCCTAACATCACAGATGGAACTAAGAGGGTTATTGAGTTTGTAACCGCACCAAACAATCCTGATGGGAAGCTAAACAAAGCAAATTTTCAAGGACCAAATTCCGTAGCAATCTATGATCGTGTTTATTATTGGCCACATTTCACACCAATTCCAACTCCAGCAAATGACGATGTCATGGTGTTTTCAATTTCCAAGCTCACTGGCCATGCTGGTACAAGATTAGGGTGGGCAGTGATAAAGGATGAGGCAGTGTACCAAAGAATGTTGAATCACACTGTGATAAGTAACTTGGGTATTTCTCGCGATACTCAGCTAAGAGCTTTCAAGCTTTTGAATGCAGTCGTAGAAGGTGGAGGGAAAGAAATTTTCGAATTCGGATACACCACAATGAGGAAACGTTGGGAAACTTTGAGTAACGCCCTGTCTGTATCAAACCGCTTTTCTCTGCAGAAAGTTGAACCTCTCTACTGCACTTTTTTCAAAAAAATTAGAAGACCATCTCCAGCCTATGCCTGGGTGAAGTGCGAGAGGGAAGAGGATAAAGATTGCTACGCAGTCCTCAAAGACGAAGCTAATGTTAATGGCCGTAGAGGAAGTGTCTTTGGTTCTGAAGATCGATATGTACGTCTCAGCCTCATAAGAAGCCAAGATGATTTCGATATATTGCTTCACCGACTGAAACAGTTAGTCTCCAAGGAAATGCACAGCCCCATATTTATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

466

Amino Acids

52.13

Weight (kDa)

6.61

Isoelectric Point (pI)

42.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EGF_alliinase PF04863 37 - 92 2.1e-28 Alliinase EGF-like domain
Alliinase_C PF04864 94 - 456 1.5e-139 Allinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 583
AasI GACNNNNNNGTC 1 cut(s) 93
Acc36I ACCTGC 1 cut(s) 583
AccII CGCG 2 cut(s) 608, 981
AciI CCGC 3 cut(s) 430, 723, 1114
AclI AACGTT 1 cut(s) 1075
AclWI GGATC 1 cut(s) 293
AcoI YGGCCR 3 cut(s) 809, 880, 1261
AcsI RAATTY 4 cut(s) 760, 775, 1041, 1049
AcuI CTGAAG 1 cut(s) 1308
AcyI GRCGYC 1 cut(s) 144
AdeI CACNNNGTG 1 cut(s) 955
AfaI GTAC 5 cut(s) 438, 476, 892, 932, 1302
AfeI AGCGCT 1 cut(s) 528
AfiI CCNNNNNNNGG 6 cut(s) 163, 164, 394, 643, 1068, 1191
AjnI CCWGG 3 cut(s) 36, 214, 1190
AloI GAACNNNNNNTCC 2 cut(s) 638, 670
Alw21I GWGCWC 1 cut(s) 108
Alw26I GTCTC 2 cut(s) 1310, 1372
AlwI GGATC 1 cut(s) 293
Ama87I CYCGRG 1 cut(s) 163
Aor51HI AGCGCT 1 cut(s) 528
AoxI GGCC 3 cut(s) 809, 880, 1261
ApeKI GCWGC 4 cut(s) 125, 149, 515, 676
ApoI RAATTY 4 cut(s) 760, 775, 1041, 1049
AspLEI GCGC 2 cut(s) 529, 610
AspS9I GGNCC 1 cut(s) 770
AsuHPI GGTGA 3 cut(s) 564, 1207, 1340
AsuII TTCGAA 2 cut(s) 657, 1047
AvaI CYCGRG 1 cut(s) 163
AvaII GGWCC 1 cut(s) 770
BalI TGGCCA 2 cut(s) 811, 882
BanII GRGCYC 2 cut(s) 108, 318
BbsI GAAGAC 1 cut(s) 1177
Bbv12I GWGCWC 1 cut(s) 108
BbvI GCAGC 4 cut(s) 136, 137, 502, 663
BccI CCATC 8 cut(s) 161, 182, 197, 510, 659, 686, 734, 1183
BceAI ACGGC 1 cut(s) 1248
BciT130I CCWGG 3 cut(s) 38, 216, 1192
BciVI GTATCC 1 cut(s) 1049
BclI TGATCA 1 cut(s) 391
BcoDI GTCTC 2 cut(s) 1310, 1372
BfaI CTAG 2 cut(s) 353, 579
BfmI CTRYAG 3 cut(s) 48, 516, 1124
BfoI RGCGCY 1 cut(s) 530
BfuAI ACCTGC 1 cut(s) 583
BfuI GTATCC 1 cut(s) 1049
BisI GCNGC 4 cut(s) 126, 150, 516, 677
BlpI GCTNAGC 1 cut(s) 6
BlsI GCNGC 4 cut(s) 127, 151, 517, 678
Bme1390I CCNGG 3 cut(s) 38, 216, 1192
Bme18I GGWCC 1 cut(s) 770
BmeT110I CYCGRG 1 cut(s) 163
BmgT120I GGNCC 1 cut(s) 770
BmrFI CCNGG 3 cut(s) 38, 216, 1192
BmsI GCATC 2 cut(s) 315, 376
BpiI GAAGAC 1 cut(s) 1177
BpmI CTGGAG 2 cut(s) 819, 1164
Bpu1102I GCTNAGC 1 cut(s) 6
Bpu14I TTCGAA 2 cut(s) 657, 1047
BpuEI CTTGAG 2 cut(s) 437, 450
Bsa29I ATCGAT 1 cut(s) 1294
BsaHI GRCGYC 1 cut(s) 144
BsaJI CCNNGG 3 cut(s) 138, 1191, 1371
Bsc4I CCNNNNNNNGG 6 cut(s) 163, 164, 394, 643, 1068, 1191
Bse1I ACTGG 2 cut(s) 546, 883
Bse3DI GCAATG 1 cut(s) 444
BseBI CCWGG 3 cut(s) 38, 216, 1192
BseCI ATCGAT 1 cut(s) 1294
BseDI CCNNGG 3 cut(s) 138, 1191, 1371
BseGI GGATG 7 cut(s) 153, 193, 330, 426, 566, 670, 925
BseLI CCNNNNNNNGG 6 cut(s) 163, 164, 394, 643, 1068, 1191
BseMI GCAATG 1 cut(s) 444
BseMII CTCAG 5 cut(s) 121, 261, 272, 1001, 1321
BseNI ACTGG 2 cut(s) 546, 883
BseRI GAGGAG 1 cut(s) 497
BseXI GCAGC 4 cut(s) 136, 137, 502, 663
BsgI GTGCAG 1 cut(s) 1132
Bsh1236I CGCG 2 cut(s) 608, 981
BshFI GGCC 3 cut(s) 811, 882, 1263
BshVI ATCGAT 1 cut(s) 1294
BsiHKAI GWGCWC 1 cut(s) 108
BsiHKCI CYCGRG 1 cut(s) 163
BslI CCNNNNNNNGG 6 cut(s) 163, 164, 394, 643, 1068, 1191
BsmAI GTCTC 2 cut(s) 1310, 1372
BsmBI CGTCTC 1 cut(s) 1310
BsmI GAATGC 1 cut(s) 1018
BsnI GGCC 3 cut(s) 811, 882, 1263
BsoBI CYCGRG 1 cut(s) 163
Bsp119I TTCGAA 2 cut(s) 657, 1047
Bsp1286I GDGCHC 2 cut(s) 108, 318
Bsp143I GATC 6 cut(s) 69, 298, 391, 638, 793, 1291
Bsp1720I GCTNAGC 1 cut(s) 6
Bsp68I TCGCGA 1 cut(s) 981
BspACI CCGC 3 cut(s) 430, 723, 1114
BspANI GGCC 3 cut(s) 811, 882, 1263
BspCNI CTCAG 5 cut(s) 120, 260, 271, 1000, 1320
BspDI ATCGAT 1 cut(s) 1294
BspFNI CGCG 2 cut(s) 608, 981
BspMAI CTGCAG 2 cut(s) 520, 1128
BspMI ACCTGC 1 cut(s) 583
BspPI GGATC 1 cut(s) 293
BspT104I TTCGAA 2 cut(s) 657, 1047
BsrDI GCAATG 1 cut(s) 444
BsrI ACTGG 2 cut(s) 546, 883
BssECI CCNNGG 3 cut(s) 138, 1191, 1371
BssMI GATC 6 cut(s) 69, 298, 391, 638, 793, 1291
BssNI GRCGYC 1 cut(s) 144
BssT1I CCWWGG 1 cut(s) 1371
Bst2UI CCWGG 3 cut(s) 38, 216, 1192
Bst4CI ACNGT 4 cut(s) 293, 474, 955, 1362
Bst6I CTCTTC 1 cut(s) 1206
BstACI GRCGYC 1 cut(s) 144
BstAPI GCANNNNNTGC 1 cut(s) 234
BstBI TTCGAA 2 cut(s) 657, 1047
BstC8I GCNNGC 2 cut(s) 209, 493
BstDEI CTNAG 9 cut(s) 6, 107, 247, 258, 310, 699, 987, 992, 1307
BstF5I GGATG 7 cut(s) 153, 193, 330, 426, 566, 670, 925
BstFNI CGCG 2 cut(s) 608, 981
BstH2I RGCGCY 1 cut(s) 530
BstHHI GCGC 2 cut(s) 529, 610
BstKTI GATC 6 cut(s) 72, 301, 394, 641, 796, 1294
BstMAI GTCTC 2 cut(s) 1310, 1372
BstMBI GATC 6 cut(s) 69, 298, 391, 638, 793, 1291
BstMWI GCNNNNNNNGC 7 cut(s) 134, 234, 243, 252, 421, 455, 524
BstNI CCWGG 3 cut(s) 38, 216, 1192
BstNSI RCATGY 1 cut(s) 335
BstSCI CCNGG 3 cut(s) 36, 214, 1190
BstSFI CTRYAG 3 cut(s) 48, 516, 1124
BstUI CGCG 2 cut(s) 608, 981
BstV1I GCAGC 4 cut(s) 136, 137, 502, 663
BstV2I GAAGAC 1 cut(s) 1177
BstX2I RGATCY 1 cut(s) 298
BstYI RGATCY 1 cut(s) 298
Bsu15I ATCGAT 1 cut(s) 1294
BsuI GTATCC 1 cut(s) 1049
BsuRI GGCC 3 cut(s) 811, 882, 1263
BsuTUI ATCGAT 1 cut(s) 1294
BtsCI GGATG 7 cut(s) 153, 193, 330, 426, 566, 670, 925
BtsI GCAGTG 2 cut(s) 915, 933
BtsIMutI CAGTG 6 cut(s) 104, 298, 876, 915, 933, 951
BtuMI TCGCGA 1 cut(s) 981
BveI ACCTGC 1 cut(s) 583
Cac8I GCNNGC 2 cut(s) 209, 493
CfoI GCGC 2 cut(s) 529, 610
Cfr13I GGNCC 1 cut(s) 770
ClaI ATCGAT 1 cut(s) 1294
CseI GACGC 1 cut(s) 133
CsiI ACCWGGT 1 cut(s) 214
Csp6I GTAC 5 cut(s) 437, 475, 891, 931, 1301
CviAII CATG 5 cut(s) 89, 170, 332, 853, 884
CviQI GTAC 5 cut(s) 437, 475, 891, 931, 1301
DdeI CTNAG 9 cut(s) 6, 107, 247, 258, 310, 699, 987, 992, 1307
DpnI GATC 6 cut(s) 71, 300, 393, 640, 795, 1293
DpnII GATC 6 cut(s) 69, 298, 391, 638, 793, 1291
DraIII CACNNNGTG 1 cut(s) 955
DrdI GACNNNNNNGTC 1 cut(s) 93
DseDI GACNNNNNNGTC 1 cut(s) 93
EaeI YGGCCR 3 cut(s) 809, 880, 1261
Eam1104I CTCTTC 1 cut(s) 1206
EarI CTCTTC 1 cut(s) 1206
Ecl136II GAGCTC 1 cut(s) 106
Eco130I CCWWGG 1 cut(s) 1371
Eco24I GRGCYC 2 cut(s) 108, 318
Eco47I GGWCC 1 cut(s) 770
Eco47III AGCGCT 1 cut(s) 528
Eco53kI GAGCTC 1 cut(s) 106
Eco57I CTGAAG 1 cut(s) 1308
Eco88I CYCGRG 1 cut(s) 163
EcoICRI GAGCTC 1 cut(s) 106
EcoRI GAATTC 1 cut(s) 1049
EcoRII CCWGG 3 cut(s) 36, 214, 1190
EcoT14I CCWWGG 1 cut(s) 1371
EcoT38I GRGCYC 2 cut(s) 108, 318
ErhI CCWWGG 1 cut(s) 1371
Esp3I CGTCTC 1 cut(s) 1310
FaeI CATG 5 cut(s) 92, 173, 335, 856, 887
FatI CATG 5 cut(s) 88, 169, 331, 852, 883
FbaI TGATCA 1 cut(s) 391
Fnu4HI GCNGC 4 cut(s) 126, 150, 516, 677
FokI GGATG 7 cut(s) 140, 200, 337, 413, 553, 677, 932
FriOI GRGCYC 2 cut(s) 108, 318
Fsp4HI GCNGC 4 cut(s) 126, 150, 516, 677
FspBI CTAG 2 cut(s) 353, 579
GlaI GCGC 2 cut(s) 528, 609
GluI GCNGC 4 cut(s) 126, 150, 516, 677
GsuI CTGGAG 2 cut(s) 819, 1164
HaeII RGCGCY 1 cut(s) 530
HaeIII GGCC 3 cut(s) 811, 882, 1263
HgaI GACGC 1 cut(s) 133
HhaI GCGC 2 cut(s) 529, 610
Hin1I GRCGYC 1 cut(s) 144
Hin1II CATG 5 cut(s) 92, 173, 335, 856, 887
Hin6I GCGC 2 cut(s) 527, 608
HinP1I GCGC 2 cut(s) 527, 608
HindIII AAGCTT 2 cut(s) 19, 1004
HinfI GANTC 1 cut(s) 946
HphI GGTGA 3 cut(s) 564, 1207, 1340
Hpy166II GTNNAC 2 cut(s) 439, 931
Hpy188I TCNGA 5 cut(s) 250, 340, 638, 1055, 1288
Hpy188III TCNNGA 3 cut(s) 200, 737, 980
Hpy8I GTNNAC 2 cut(s) 439, 931
Hpy99I CGWCG 2 cut(s) 32, 149
HpyAV CCTTC 4 cut(s) 114, 190, 653, 1019
HpyCH4III ACNGT 4 cut(s) 293, 474, 955, 1362
HpyCH4IV ACGT 3 cut(s) 27, 1075, 1303
HpyCH4V TGCA 9 cut(s) 228, 328, 347, 458, 518, 1016, 1126, 1149, 1381
HpyF10VI GCNNNNNNNGC 7 cut(s) 134, 234, 243, 252, 421, 455, 524
HpyF3I CTNAG 9 cut(s) 6, 107, 247, 258, 310, 699, 987, 992, 1307
HpySE526I ACGT 3 cut(s) 27, 1075, 1303
Hsp92I GRCGYC 1 cut(s) 144
Hsp92II CATG 5 cut(s) 92, 173, 335, 856, 887
HspAI GCGC 2 cut(s) 527, 608
Ksp22I TGATCA 1 cut(s) 391
Kzo9I GATC 6 cut(s) 69, 298, 391, 638, 793, 1291
LmnI GCTCC 2 cut(s) 103, 114
Lsp1109I GCAGC 4 cut(s) 136, 137, 502, 663
LweI GCATC 2 cut(s) 315, 376
MabI ACCWGGT 1 cut(s) 214
MaeI CTAG 2 cut(s) 353, 579
MaeII ACGT 3 cut(s) 27, 1075, 1303
MaeIII GTNAC 4 cut(s) 460, 718, 962, 1091
MalI GATC 6 cut(s) 71, 300, 393, 640, 795, 1293
MboI GATC 6 cut(s) 69, 298, 391, 638, 793, 1291
MboII GAAGA 5 cut(s) 64, 143, 1182, 1223, 1301
MflI RGATCY 1 cut(s) 298
MhlI GDGCHC 2 cut(s) 108, 318
MlsI TGGCCA 2 cut(s) 811, 882
MluNI TGGCCA 2 cut(s) 811, 882
MmeI TCCRAC 2 cut(s) 92, 854
Mox20I TGGCCA 2 cut(s) 811, 882
MscI TGGCCA 2 cut(s) 811, 882
MseI TTAA 2 cut(s) 522, 1257
MslI CAYNNNNRTG 1 cut(s) 1064
Msp20I TGGCCA 2 cut(s) 811, 882
MspR9I CCNGG 3 cut(s) 38, 216, 1192
Mva1269I GAATGC 1 cut(s) 1018
MvaI CCWGG 3 cut(s) 38, 216, 1192
MvnI CGCG 2 cut(s) 608, 981
MwoI GCNNNNNNNGC 7 cut(s) 134, 234, 243, 252, 421, 455, 524
NdeII GATC 6 cut(s) 69, 298, 391, 638, 793, 1291
NlaIII CATG 5 cut(s) 92, 173, 335, 856, 887
NmeAIII GCCGAG 1 cut(s) 163
NmuCI GTSAC 1 cut(s) 460
NruI TCGCGA 1 cut(s) 981
NspI RCATGY 1 cut(s) 335
NspV TTCGAA 2 cut(s) 657, 1047
PaqCI CACCTGC 1 cut(s) 583
PcsI WCGNNNNNNNCGW 1 cut(s) 1300
PctI GAATGC 1 cut(s) 1018
PfeI GAWTC 1 cut(s) 946
PflFI GACNNNGTC 1 cut(s) 848
PkrI GCNGC 4 cut(s) 127, 151, 517, 678
Psp124BI GAGCTC 1 cut(s) 108
Psp1406I AACGTT 1 cut(s) 1075
Psp6I CCWGG 3 cut(s) 36, 214, 1190
PspGI CCWGG 3 cut(s) 36, 214, 1190
PspPI GGNCC 1 cut(s) 770
PstI CTGCAG 2 cut(s) 520, 1128
PsuI RGATCY 1 cut(s) 298
PsyI GACNNNGTC 1 cut(s) 848
RruI TCGCGA 1 cut(s) 981
RsaI GTAC 5 cut(s) 438, 476, 892, 932, 1302
RsaNI GTAC 5 cut(s) 437, 475, 891, 931, 1301
RseI CAYNNNNRTG 1 cut(s) 1064
SacI GAGCTC 1 cut(s) 108
SaqAI TTAA 2 cut(s) 522, 1257
SatI GCNGC 4 cut(s) 126, 150, 516, 677
Sau3AI GATC 6 cut(s) 69, 298, 391, 638, 793, 1291
Sau96I GGNCC 1 cut(s) 770
ScrFI CCNGG 3 cut(s) 38, 216, 1192
SduI GDGCHC 2 cut(s) 108, 318
SexAI ACCWGGT 1 cut(s) 214
SfaNI GCATC 2 cut(s) 315, 376
SfcI CTRYAG 3 cut(s) 48, 516, 1124
SfuI TTCGAA 2 cut(s) 657, 1047
SinI GGWCC 1 cut(s) 770
SmiMI CAYNNNNRTG 1 cut(s) 1064
SmlI CTYRAG 2 cut(s) 416, 465
SmoI CTYRAG 2 cut(s) 416, 465
SsiI CCGC 3 cut(s) 430, 723, 1114
SspMI CTAG 2 cut(s) 353, 579
SstI GAGCTC 1 cut(s) 108
StyD4I CCNGG 3 cut(s) 36, 214, 1190
StyI CCWWGG 1 cut(s) 1371
TaaI ACNGT 4 cut(s) 293, 474, 955, 1362
TaiI ACGT 3 cut(s) 30, 1078, 1306
TaqI TCGA 5 cut(s) 370, 657, 1047, 1294, 1335
TatI WGTACW 1 cut(s) 436
TfiI GAWTC 1 cut(s) 946
Tru1I TTAA 2 cut(s) 522, 1257
Tru9I TTAA 2 cut(s) 522, 1257
TscAI CASTG 6 cut(s) 104, 298, 883, 915, 933, 958
TseFI GTSAC 1 cut(s) 460
TseI GCWGC 4 cut(s) 125, 149, 515, 676
Tsp45I GTSAC 1 cut(s) 460
TspDTI ATGAA 1 cut(s) 630
TspGWI ACGGA 3 cut(s) 99, 641, 769
TspRI CASTG 6 cut(s) 104, 298, 883, 915, 933, 958
Tth111I GACNNNGTC 1 cut(s) 848
VpaK11BI GGWCC 1 cut(s) 770
XapI RAATTY 4 cut(s) 760, 775, 1041, 1049
XceI RCATGY 1 cut(s) 335
XcmI CCANNNNNNNNNTGG 1 cut(s) 1188
XspI CTAG 2 cut(s) 353, 579
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.