Rh6BG356400

Belongs to the glycosyltransferase 8 family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
Physical Location & Seq
Reverse (-)
58659322 .. 58659759
438 bp
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UTR
Exon/CDS
Intron
Rh6BG356400.1

Sequence Viewer

Length: 204 bp
ATGGGAAACCGCATTAACGAGTTGGAACGTAGCATCGGTGACCTAAGAACAGAGATGGGAATCGAAGGCTCTCCATCTCCCGCCCCCCAGTCCAAGTCTGATGAAGATGGAGGGAAGCAAGATGAAGCTACTGGCCCTCTTTTGAGCCCGACTTATAAAAATATTCTGCTCAAGTGTTTAACAATTCACTGTTGTGTAGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

67

Amino Acids

7.22

Weight (kDa)

4.91

Isoelectric Point (pI)

84.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 156
AciI CCGC 2 cut(s) 10, 81
AleI CACNNNNGTG 1 cut(s) 192
AluBI AGCT 1 cut(s) 128
AluI AGCT 1 cut(s) 128
AoxI GGCC 1 cut(s) 133
AspS9I GGNCC 1 cut(s) 134
AsuHPI GGTGA 1 cut(s) 50
BanII GRGCYC 1 cut(s) 149
BccI CCATC 3 cut(s) 49, 82, 101
BmgT120I GGNCC 1 cut(s) 134
BmrI ACTGGG 1 cut(s) 82
BmsI GCATC 1 cut(s) 42
BmuI ACTGGG 1 cut(s) 82
BpuEI CTTGAG 1 cut(s) 155
BsaBI GATNNNNATC 1 cut(s) 59
Bse1I ACTGG 2 cut(s) 88, 136
Bse8I GATNNNNATC 1 cut(s) 59
BseJI GATNNNNATC 1 cut(s) 59
BseNI ACTGG 2 cut(s) 88, 136
BshFI GGCC 1 cut(s) 135
BsnI GGCC 1 cut(s) 135
Bsp1286I GDGCHC 1 cut(s) 149
BspACI CCGC 2 cut(s) 10, 81
BspANI GGCC 1 cut(s) 135
BsrI ACTGG 2 cut(s) 88, 136
Bst4CI ACNGT 1 cut(s) 191
BstDEI CTNAG 1 cut(s) 44
BstEII GGTNACC 1 cut(s) 38
BstPI GGTNACC 1 cut(s) 38
BsuRI GGCC 1 cut(s) 135
BtsIMutI CAGTG 1 cut(s) 187
Cfr13I GGNCC 1 cut(s) 134
CviJI RGCY 4 cut(s) 69, 128, 135, 147
CviKI_1 RGCY 4 cut(s) 69, 128, 135, 147
DdeI CTNAG 1 cut(s) 44
Eco24I GRGCYC 1 cut(s) 149
Eco91I GGTNACC 1 cut(s) 38
EcoO65I GGTNACC 1 cut(s) 38
EcoT38I GRGCYC 1 cut(s) 149
FaiI YATR 1 cut(s) 156
FauI CCCGC 1 cut(s) 88
FriOI GRGCYC 1 cut(s) 149
HaeIII GGCC 1 cut(s) 135
HinfI GANTC 1 cut(s) 60
HphI GGTGA 1 cut(s) 50
Hpy188I TCNGA 1 cut(s) 100
HpyAV CCTTC 1 cut(s) 59
HpyCH4III ACNGT 1 cut(s) 191
HpyCH4IV ACGT 1 cut(s) 28
HpyF3I CTNAG 1 cut(s) 44
HpySE526I ACGT 1 cut(s) 28
LpnPI CCDG 2 cut(s) 101, 117
LweI GCATC 1 cut(s) 42
MaeII ACGT 1 cut(s) 28
MaeIII GTNAC 1 cut(s) 38
MboII GAAGA 1 cut(s) 116
MhlI GDGCHC 1 cut(s) 149
MluCI AATT 1 cut(s) 183
MnlI CCTC 2 cut(s) 104, 147
MseI TTAA 2 cut(s) 15, 179
MslI CAYNNNNRTG 1 cut(s) 192
NmuCI GTSAC 1 cut(s) 38
OliI CACNNNNGTG 1 cut(s) 192
PfeI GAWTC 1 cut(s) 60
PsiI TTATAA 1 cut(s) 156
PspEI GGTNACC 1 cut(s) 38
PspPI GGNCC 1 cut(s) 134
RseI CAYNNNNRTG 1 cut(s) 192
SaqAI TTAA 2 cut(s) 15, 179
Sau96I GGNCC 1 cut(s) 134
SduI GDGCHC 1 cut(s) 149
SetI ASST 3 cut(s) 31, 45, 130
SfaNI GCATC 1 cut(s) 42
SgeI CNNG 8 cut(s) 31, 92, 100, 106, 131, 144, 160, 184
SmiMI CAYNNNNRTG 1 cut(s) 192
SmlI CTYRAG 1 cut(s) 170
SmoI CTYRAG 1 cut(s) 170
Sse9I AATT 1 cut(s) 183
SsiI CCGC 2 cut(s) 10, 81
SspI AATATT 1 cut(s) 163
TaaI ACNGT 1 cut(s) 191
TaiI ACGT 1 cut(s) 31
TaqI TCGA 1 cut(s) 63
TasI AATT 1 cut(s) 183
TfiI GAWTC 1 cut(s) 60
Tru1I TTAA 2 cut(s) 15, 179
Tru9I TTAA 2 cut(s) 15, 179
TscAI CASTG 1 cut(s) 194
TseFI GTSAC 1 cut(s) 38
Tsp45I GTSAC 1 cut(s) 38
TspDTI ATGAA 2 cut(s) 117, 138
TspRI CASTG 1 cut(s) 194
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.