Rh7AG322200

f-box protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Forward (+)
36520175 .. 36522027
1853 bp
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UTR
Exon/CDS
Intron
Rh7AG322200.1

Sequence Viewer

Length: 345 bp
ATGGTGACAAGAAGCAAGAGTTCAGGCCTATTAAAGTTAGTGGAGGAGAGGTTATTGAAGAGGAAAACAGAGGAAGAGAAAAAGCAAGCACAAATTTCATATATCCCGAAGGACTGTATCTCAAACATCCTTGCACGACTTCCTGCTGACTCTCTTCAAAGGTCGAGTTTAAGAATCAAGGGAGATATTATTTTCCGTAGAAACAAAGACGGCTCTTTCTATGCTTACGACTTCCAACAGCAACAGATGACAGAGATTGGGAAGATTAATGGACTACCAAGGTGCCTGCCTCATGTCAATAGCCTTGTTACTTGGATGCAAGCGAGTGAGGACATGTTTGACTGA

Protein Analysis

114

Amino Acids

13.19

Weight (kDa)

9.39

Isoelectric Point (pI)

74.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 282
AcsI RAATTY 1 cut(s) 93
AflIII ACRYGT 1 cut(s) 333
AgsI TTSAA 2 cut(s) 58, 158
AoxI GGCC 1 cut(s) 25
ApoI RAATTY 1 cut(s) 93
AseI ATTAAT 1 cut(s) 267
AsuHPI GGTGA 1 cut(s) 16
BanI GGYRCC 1 cut(s) 282
BceAI ACGGC 1 cut(s) 226
BmiI GGNNCC 1 cut(s) 284
BmsI GCATC 1 cut(s) 306
BsaJI CCNNGG 1 cut(s) 278
BsaXI ACNNNNNCTCC 2 cut(s) 35, 65
BseDI CCNNGG 1 cut(s) 278
BseGI GGATG 2 cut(s) 126, 321
BseRI GAGGAG 1 cut(s) 59
BshFI GGCC 1 cut(s) 27
BshNI GGYRCC 1 cut(s) 282
BsnI GGCC 1 cut(s) 27
BspANI GGCC 1 cut(s) 27
BspLI GGNNCC 1 cut(s) 284
BspT107I GGYRCC 1 cut(s) 282
BssECI CCNNGG 1 cut(s) 278
BssT1I CCWWGG 1 cut(s) 278
Bst4CI ACNGT 1 cut(s) 116
Bst6I CTCTTC 3 cut(s) 53, 69, 159
BstC8I GCNNGC 3 cut(s) 87, 287, 321
BstF5I GGATG 2 cut(s) 126, 321
BstNSI RCATGY 1 cut(s) 337
BsuRI GGCC 1 cut(s) 27
BtsCI GGATG 2 cut(s) 126, 321
Cac8I GCNNGC 3 cut(s) 87, 287, 321
CviAII CATG 2 cut(s) 293, 334
CviJI RGCY 3 cut(s) 27, 213, 303
CviKI_1 RGCY 3 cut(s) 27, 213, 303
Eam1104I CTCTTC 3 cut(s) 53, 69, 159
EarI CTCTTC 3 cut(s) 53, 69, 159
Eco130I CCWWGG 1 cut(s) 278
Eco147I AGGCCT 1 cut(s) 27
EcoT14I CCWWGG 1 cut(s) 278
ErhI CCWWGG 1 cut(s) 278
FaeI CATG 2 cut(s) 296, 337
FaiI YATR 5 cut(s) 100, 102, 222, 294, 335
FatI CATG 2 cut(s) 292, 333
FokI GGATG 2 cut(s) 113, 328
HaeIII GGCC 1 cut(s) 27
Hin1II CATG 2 cut(s) 296, 337
HinfI GANTC 2 cut(s) 149, 174
HphI GGTGA 1 cut(s) 16
Hpy188III TCNNGA 1 cut(s) 106
HpyAV CCTTC 1 cut(s) 103
HpyCH4III ACNGT 1 cut(s) 116
HpyCH4V TGCA 2 cut(s) 134, 319
Hsp92II CATG 2 cut(s) 296, 337
LpnPI CCDG 3 cut(s) 9, 156, 299
LweI GCATC 1 cut(s) 306
MaeIII GTNAC 2 cut(s) 4, 307
MboII GAAGA 4 cut(s) 70, 86, 146, 274
MluCI AATT 1 cut(s) 93
MlyI GAGTC 1 cut(s) 143
MmeI TCCRAC 1 cut(s) 259
MnlI CCTC 6 cut(s) 37, 42, 54, 64, 300, 322
MseI TTAA 3 cut(s) 32, 170, 267
NlaIII CATG 2 cut(s) 296, 337
NlaIV GGNNCC 1 cut(s) 284
NmuCI GTSAC 1 cut(s) 4
NspI RCATGY 1 cut(s) 337
PceI AGGCCT 1 cut(s) 27
PciI ACATGT 1 cut(s) 333
PfeI GAWTC 1 cut(s) 174
PleI GAGTC 1 cut(s) 143
PpsI GAGTC 1 cut(s) 143
PscI ACATGT 1 cut(s) 333
PshBI ATTAAT 1 cut(s) 267
PspN4I GGNNCC 1 cut(s) 284
SaqAI TTAA 3 cut(s) 32, 170, 267
SchI GAGTC 1 cut(s) 143
SetI ASST 3 cut(s) 53, 164, 284
SfaNI GCATC 1 cut(s) 306
Sse9I AATT 1 cut(s) 93
SseBI AGGCCT 1 cut(s) 27
StuI AGGCCT 1 cut(s) 27
StyI CCWWGG 1 cut(s) 278
TaaI ACNGT 1 cut(s) 116
TaqI TCGA 1 cut(s) 164
TasI AATT 1 cut(s) 93
TfiI GAWTC 1 cut(s) 174
Tru1I TTAA 3 cut(s) 32, 170, 267
Tru9I TTAA 3 cut(s) 32, 170, 267
TseFI GTSAC 1 cut(s) 4
Tsp45I GTSAC 1 cut(s) 4
TspDTI ATGAA 1 cut(s) 87
TspGWI ACGGA 1 cut(s) 185
VspI ATTAAT 1 cut(s) 267
XapI RAATTY 1 cut(s) 93
XceI RCATGY 1 cut(s) 337
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.