Rh7BG430900

Belongs to the cyclin family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
Physical Location & Seq
Forward (+)
49313390 .. 49316833
3444 bp
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UTR
Exon/CDS
Intron
Rh7BG430900.1

Sequence Viewer

Length: 657 bp
ATGCAATTGTTGGCTGTGGCATGTTTGTCCCTCGCAGCCAAAATGGACGAGATTGATGTCCCACTCTCTCTTGATTTACAGGTGGCCGAGTCAAAATATGTATTTGAGGCTAGAACTATTCAAAGAATGGAGCTACTGGTCTTGAGCACATTGAGATGGAGAATGCAAGCAGTTACTCCAATCTCATTCATAGATTCCTTCCTAGTCAAGCTCAATGAGGACAAAATCCCACTTAAAGCTTCAATCTTTAGAGCAGTTCAACTCATATTGAGCACAACCAAGGGAATTGACTTCTTGGAATTTAAACCATCAGAGGTCGCAGCAGCAGTGGCTATATCTGTAGCAGGAGAAGGCAAAGCATTAGATGACACTGAGAAAGCAATCTCTGTGCTCATCCAACATGTCGACTTAGAAAAGGAGAGAGTGGTAAAGTGTGTAAATTTGATTCAAGATGTTGGATTAATGAGTGGGGCCTTCAAGAATGGTAGTGGTTCAGTGCAGTCTGTGCCACAAAGCCCTATTGGGGTGTTGGATGTTGCATGCTTCAGCTATAAAAGTGATGATCACACCACAGTTGGGTCATGTGCAAATTCTTTTCATAATGGCTCAGACACCAAAAGAAGGAAGCTAAACAGACCCTATGAAGTGGAGTTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

218

Amino Acids

23.87

Weight (kDa)

5.68

Isoelectric Point (pI)

34.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cyclin_N PF00134 1 - 55 3e-12 Cyclin, N-terminal domain
Cyclin_C PF02984 58 - 153 1.4e-09 Cyclin, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 405
AcoI YGGCCR 1 cut(s) 84
AcsI RAATTY 3 cut(s) 299, 439, 589
AcuI CTGAAG 1 cut(s) 529
AfiI CCNNNNNNNGG 3 cut(s) 523, 576, 621
AflIII ACRYGT 1 cut(s) 400
AgsI TTSAA 5 cut(s) 122, 243, 260, 449, 478
AluBI AGCT 5 cut(s) 133, 211, 239, 549, 628
AluI AGCT 5 cut(s) 133, 211, 239, 549, 628
Alw21I GWGCWC 3 cut(s) 149, 275, 393
AoxI GGCC 2 cut(s) 84, 471
ApeKI GCWGC 3 cut(s) 35, 320, 323
ApoI RAATTY 3 cut(s) 299, 439, 589
AseI ATTAAT 1 cut(s) 461
AspS9I GGNCC 1 cut(s) 471
Bbv12I GWGCWC 3 cut(s) 149, 275, 393
BbvI GCAGC 3 cut(s) 47, 332, 335
BccI CCATC 2 cut(s) 150, 316
BclI TGATCA 1 cut(s) 562
BfaI CTAG 2 cut(s) 111, 203
BfmI CTRYAG 1 cut(s) 339
BisI GCNGC 3 cut(s) 36, 321, 324
BlsI GCNGC 3 cut(s) 37, 322, 325
BmgT120I GGNCC 1 cut(s) 471
BmiI GGNNCC 1 cut(s) 472
BpuEI CTTGAG 1 cut(s) 163
BsaJI CCNNGG 1 cut(s) 279
Bsc4I CCNNNNNNNGG 3 cut(s) 523, 576, 621
Bse1I ACTGG 1 cut(s) 141
BseDI CCNNGG 1 cut(s) 279
BseGI GGATG 2 cut(s) 393, 538
BseLI CCNNNNNNNGG 3 cut(s) 523, 576, 621
BseMII CTCAG 2 cut(s) 363, 621
BseNI ACTGG 1 cut(s) 141
BseXI GCAGC 3 cut(s) 47, 332, 335
BsgI GTGCAG 1 cut(s) 518
BshFI GGCC 2 cut(s) 86, 473
BsiHKAI GWGCWC 3 cut(s) 149, 275, 393
BslFI GGGAC 2 cut(s) 13, 44
BslI CCNNNNNNNGG 3 cut(s) 523, 576, 621
BsmFI GGGAC 2 cut(s) 13, 44
BsmI GAATGC 1 cut(s) 168
BsnI GGCC 2 cut(s) 86, 473
Bsp1286I GDGCHC 3 cut(s) 149, 275, 393
Bsp143I GATC 1 cut(s) 562
BspANI GGCC 2 cut(s) 86, 473
BspCNI CTCAG 2 cut(s) 364, 620
BspLI GGNNCC 1 cut(s) 472
BsrI ACTGG 1 cut(s) 141
BssECI CCNNGG 1 cut(s) 279
BssMI GATC 1 cut(s) 562
BssT1I CCWWGG 1 cut(s) 279
Bst4CI ACNGT 1 cut(s) 574
BstAPI GCANNNNNTGC 1 cut(s) 505
BstC8I GCNNGC 2 cut(s) 168, 541
BstDEI CTNAG 3 cut(s) 372, 409, 607
BstF5I GGATG 2 cut(s) 393, 538
BstKTI GATC 1 cut(s) 565
BstMBI GATC 1 cut(s) 562
BstMWI GCNNNNNNNGC 2 cut(s) 329, 505
BstNSI RCATGY 3 cut(s) 24, 404, 543
BstSFI CTRYAG 1 cut(s) 339
BstV1I GCAGC 3 cut(s) 47, 332, 335
BsuRI GGCC 2 cut(s) 86, 473
BtsCI GGATG 2 cut(s) 393, 538
BtsI GCAGTG 1 cut(s) 333
BtsIMutI CAGTG 3 cut(s) 333, 369, 501
Cac8I GCNNGC 2 cut(s) 168, 541
Cfr13I GGNCC 1 cut(s) 471
CviAII CATG 4 cut(s) 21, 401, 540, 582
DdeI CTNAG 3 cut(s) 372, 409, 607
DpnI GATC 1 cut(s) 564
DpnII GATC 1 cut(s) 562
DraI TTTAAA 1 cut(s) 304
EaeI YGGCCR 1 cut(s) 84
Eco130I CCWWGG 1 cut(s) 279
Eco57I CTGAAG 1 cut(s) 529
EcoO109I RGGNCCY 1 cut(s) 471
EcoT14I CCWWGG 1 cut(s) 279
ErhI CCWWGG 1 cut(s) 279
FaeI CATG 4 cut(s) 24, 404, 543, 585
FaqI GGGAC 2 cut(s) 13, 44
FatI CATG 4 cut(s) 20, 400, 539, 581
FbaI TGATCA 1 cut(s) 562
FblI GTMKAC 1 cut(s) 405
Fnu4HI GCNGC 3 cut(s) 36, 321, 324
FokI GGATG 2 cut(s) 380, 545
Fsp4HI GCNGC 3 cut(s) 36, 321, 324
FspBI CTAG 2 cut(s) 111, 203
GluI GCNGC 3 cut(s) 36, 321, 324
HaeIII GGCC 2 cut(s) 86, 473
Hin1II CATG 4 cut(s) 24, 404, 543, 585
HincII GTYRAC 1 cut(s) 406
HindII GTYRAC 1 cut(s) 406
HindIII AAGCTT 1 cut(s) 237
HinfI GANTC 3 cut(s) 89, 194, 445
Hpy166II GTNNAC 1 cut(s) 406
Hpy188I TCNGA 2 cut(s) 313, 610
Hpy188III TCNNGA 4 cut(s) 71, 142, 449, 478
Hpy8I GTNNAC 1 cut(s) 406
HpyAV CCTTC 4 cut(s) 208, 344, 484, 615
HpyCH4III ACNGT 1 cut(s) 574
HpyCH4V TGCA 5 cut(s) 4, 166, 499, 539, 587
HpyF10VI GCNNNNNNNGC 2 cut(s) 329, 505
HpyF3I CTNAG 3 cut(s) 372, 409, 607
Hsp92II CATG 4 cut(s) 24, 404, 543, 585
Ksp22I TGATCA 1 cut(s) 562
Kzo9I GATC 1 cut(s) 562
LmnI GCTCC 1 cut(s) 130
LpnPI CCDG 3 cut(s) 65, 122, 330
Lsp1109I GCAGC 3 cut(s) 47, 332, 335
MaeI CTAG 2 cut(s) 111, 203
MaeIII GTNAC 1 cut(s) 172
MalI GATC 1 cut(s) 564
MboI GATC 1 cut(s) 562
MfeI CAATTG 1 cut(s) 5
MhlI GDGCHC 3 cut(s) 149, 275, 393
MluCI AATT 5 cut(s) 5, 285, 299, 439, 589
MlyI GAGTC 1 cut(s) 98
MmeI TCCRAC 3 cut(s) 421, 436, 510
MnlI CCTC 4 cut(s) 41, 100, 211, 307
MseI TTAA 3 cut(s) 234, 303, 461
MslI CAYNNNNRTG 1 cut(s) 154
MunI CAATTG 1 cut(s) 5
Mva1269I GAATGC 1 cut(s) 168
MwoI GCNNNNNNNGC 2 cut(s) 329, 505
NdeII GATC 1 cut(s) 562
NlaIII CATG 4 cut(s) 24, 404, 543, 585
NlaIV GGNNCC 1 cut(s) 472
NmeAIII GCCGAG 1 cut(s) 112
NspI RCATGY 3 cut(s) 24, 404, 543
PaeI GCATGC 1 cut(s) 543
PciI ACATGT 1 cut(s) 400
PctI GAATGC 1 cut(s) 168
PfeI GAWTC 2 cut(s) 194, 445
PkrI GCNGC 3 cut(s) 37, 322, 325
PleI GAGTC 1 cut(s) 97
PpsI GAGTC 1 cut(s) 97
PscI ACATGT 1 cut(s) 400
PshBI ATTAAT 1 cut(s) 461
PspN4I GGNNCC 1 cut(s) 472
PspPI GGNCC 1 cut(s) 471
RseI CAYNNNNRTG 1 cut(s) 154
SalI GTCGAC 1 cut(s) 404
SaqAI TTAA 3 cut(s) 234, 303, 461
SatI GCNGC 3 cut(s) 36, 321, 324
Sau3AI GATC 1 cut(s) 562
Sau96I GGNCC 1 cut(s) 471
SchI GAGTC 1 cut(s) 98
SduI GDGCHC 3 cut(s) 149, 275, 393
SetI ASST 7 cut(s) 84, 135, 213, 241, 318, 551, 630
SfcI CTRYAG 1 cut(s) 339
SmiMI CAYNNNNRTG 1 cut(s) 154
SmlI CTYRAG 1 cut(s) 142
SmoI CTYRAG 1 cut(s) 142
SphI GCATGC 1 cut(s) 543
Sse9I AATT 5 cut(s) 5, 285, 299, 439, 589
SspMI CTAG 2 cut(s) 111, 203
StyI CCWWGG 1 cut(s) 279
TaaI ACNGT 1 cut(s) 574
TaqI TCGA 1 cut(s) 405
TasI AATT 5 cut(s) 5, 285, 299, 439, 589
TfiI GAWTC 2 cut(s) 194, 445
Tru1I TTAA 3 cut(s) 234, 303, 461
Tru9I TTAA 3 cut(s) 234, 303, 461
TscAI CASTG 3 cut(s) 333, 376, 501
TseI GCWGC 3 cut(s) 35, 320, 323
TspDTI ATGAA 3 cut(s) 178, 587, 657
TspRI CASTG 3 cut(s) 333, 376, 501
VspI ATTAAT 1 cut(s) 461
XapI RAATTY 3 cut(s) 299, 439, 589
XceI RCATGY 3 cut(s) 24, 404, 543
XmiI GTMKAC 1 cut(s) 405
XspI CTAG 2 cut(s) 111, 203
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.