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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD11G1092200.v1.1 MD14G1207400.v1.1 |
| pyrus_communis | pycom04g09480 |
| rosa_laevigata | RLG00000002647 RLG00000003273 RLG00000004832 RLG00000020604 RLG00000023106 RLG00000025072 RLG00000032712 RLG00000036050 |
| rosa_multiflora | Rmu_sc0008535.1_g000001 |
| rosa_rugosa | Rorug03G0293800 |
| rosa_samantha | Rh1AG358000 Rh1AG401600 Rh1BG223000 Rh1DG249900 Rh2CG166900 Rh2CG363400 Rh2DG386200 Rh3AG118400 Rh3BG123400 Rh3CG125100 Rh4BG086300 Rh5CG386900 Rh5CG408800 Rh5DG398800 Rh7BG143300 Rh7BG206700 Rh7CG109800 Rh7DG395600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 104 |
| AciI | CCGC | 1 cut(s) | 180 |
| AcoI | YGGCCR | 1 cut(s) | 12 |
| AcyI | GRCGYC | 1 cut(s) | 99 |
| AfaI | GTAC | 1 cut(s) | 132 |
| AgsI | TTSAA | 1 cut(s) | 56 |
| AjnI | CCWGG | 2 cut(s) | 73, 133 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 48, 80 |
| AleI | CACNNNNGTG | 1 cut(s) | 126 |
| AluBI | AGCT | 3 cut(s) | 167, 188, 222 |
| AluI | AGCT | 3 cut(s) | 167, 188, 222 |
| Alw26I | GTCTC | 1 cut(s) | 139 |
| AoxI | GGCC | 1 cut(s) | 12 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 60 |
| AsuHPI | GGTGA | 2 cut(s) | 80, 100 |
| BalI | TGGCCA | 1 cut(s) | 14 |
| BbsI | GAAGAC | 2 cut(s) | 209, 216 |
| BbvCI | CCTCAGC | 1 cut(s) | 189 |
| BciT130I | CCWGG | 2 cut(s) | 75, 135 |
| BcoDI | GTCTC | 1 cut(s) | 139 |
| BisI | GCNGC | 1 cut(s) | 181 |
| BlsI | GCNGC | 1 cut(s) | 182 |
| Bme1390I | CCNGG | 2 cut(s) | 75, 135 |
| BmrFI | CCNGG | 2 cut(s) | 75, 135 |
| BpiI | GAAGAC | 2 cut(s) | 209, 216 |
| BpmI | CTGGAG | 1 cut(s) | 96 |
| Bpu10I | CCTNAGC | 1 cut(s) | 189 |
| BsaHI | GRCGYC | 1 cut(s) | 99 |
| BsaJI | CCNNGG | 2 cut(s) | 124, 134 |
| Bse3DI | GCAATG | 1 cut(s) | 37 |
| BseBI | CCWGG | 2 cut(s) | 75, 135 |
| BseDI | CCNNGG | 2 cut(s) | 124, 134 |
| BseMI | GCAATG | 1 cut(s) | 37 |
| BseMII | CTCAG | 2 cut(s) | 159, 180 |
| BshFI | GGCC | 1 cut(s) | 14 |
| BsiSI | CCGG | 1 cut(s) | 102 |
| BsmAI | GTCTC | 1 cut(s) | 139 |
| BsmBI | CGTCTC | 1 cut(s) | 139 |
| BsnI | GGCC | 1 cut(s) | 14 |
| BspACI | CCGC | 1 cut(s) | 180 |
| BspANI | GGCC | 1 cut(s) | 14 |
| BspCNI | CTCAG | 2 cut(s) | 160, 181 |
| BsrDI | GCAATG | 1 cut(s) | 37 |
| BssECI | CCNNGG | 2 cut(s) | 124, 134 |
| BssNI | GRCGYC | 1 cut(s) | 99 |
| BssT1I | CCWWGG | 1 cut(s) | 124 |
| Bst2UI | CCWGG | 2 cut(s) | 75, 135 |
| Bst4CI | ACNGT | 1 cut(s) | 52 |
| Bst6I | CTCTTC | 1 cut(s) | 189 |
| BstACI | GRCGYC | 1 cut(s) | 99 |
| BstC8I | GCNNGC | 1 cut(s) | 16 |
| BstDEI | CTNAG | 2 cut(s) | 168, 189 |
| BstMAI | GTCTC | 1 cut(s) | 139 |
| BstNI | CCWGG | 2 cut(s) | 75, 135 |
| BstSCI | CCNGG | 2 cut(s) | 73, 133 |
| BstV2I | GAAGAC | 2 cut(s) | 209, 216 |
| BsuRI | GGCC | 1 cut(s) | 14 |
| Cac8I | GCNNGC | 1 cut(s) | 16 |
| CseI | GACGC | 2 cut(s) | 107, 156 |
| Csp6I | GTAC | 1 cut(s) | 131 |
| CviJI | RGCY | 4 cut(s) | 14, 167, 188, 222 |
| CviKI_1 | RGCY | 4 cut(s) | 14, 167, 188, 222 |
| CviQI | GTAC | 1 cut(s) | 131 |
| DdeI | CTNAG | 2 cut(s) | 168, 189 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 104 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 104 |
| EaeI | YGGCCR | 1 cut(s) | 12 |
| Eam1104I | CTCTTC | 1 cut(s) | 189 |
| EarI | CTCTTC | 1 cut(s) | 189 |
| Eco130I | CCWWGG | 1 cut(s) | 124 |
| EcoRII | CCWGG | 2 cut(s) | 73, 133 |
| EcoT14I | CCWWGG | 1 cut(s) | 124 |
| ErhI | CCWWGG | 1 cut(s) | 124 |
| Esp3I | CGTCTC | 1 cut(s) | 139 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 108, 140 |
| Fnu4HI | GCNGC | 1 cut(s) | 181 |
| Fsp4HI | GCNGC | 1 cut(s) | 181 |
| GluI | GCNGC | 1 cut(s) | 181 |
| GsuI | CTGGAG | 1 cut(s) | 96 |
| HaeIII | GGCC | 1 cut(s) | 14 |
| HapII | CCGG | 1 cut(s) | 102 |
| HgaI | GACGC | 2 cut(s) | 107, 156 |
| Hin1I | GRCGYC | 1 cut(s) | 99 |
| HinfI | GANTC | 2 cut(s) | 45, 105 |
| HpaII | CCGG | 1 cut(s) | 102 |
| HphI | GGTGA | 2 cut(s) | 80, 100 |
| Hpy166II | GTNNAC | 2 cut(s) | 71, 131 |
| Hpy188III | TCNNGA | 1 cut(s) | 116 |
| Hpy8I | GTNNAC | 2 cut(s) | 71, 131 |
| Hpy99I | CGWCG | 1 cut(s) | 101 |
| HpyCH4III | ACNGT | 1 cut(s) | 52 |
| HpyF3I | CTNAG | 2 cut(s) | 168, 189 |
| Hsp92I | GRCGYC | 1 cut(s) | 99 |
| LpnPI | CCDG | 6 cut(s) | 28, 60, 87, 115, 120, 147 |
| MaeIII | GTNAC | 1 cut(s) | 106 |
| MboII | GAAGA | 3 cut(s) | 206, 214, 221 |
| MlsI | TGGCCA | 1 cut(s) | 14 |
| MluNI | TGGCCA | 1 cut(s) | 14 |
| MlyI | GAGTC | 2 cut(s) | 39, 114 |
| MnlI | CCTC | 4 cut(s) | 29, 132, 165, 184 |
| Mox20I | TGGCCA | 1 cut(s) | 14 |
| MroXI | GAANNNNTTC | 1 cut(s) | 60 |
| MscI | TGGCCA | 1 cut(s) | 14 |
| MslI | CAYNNNNRTG | 1 cut(s) | 126 |
| Msp20I | TGGCCA | 1 cut(s) | 14 |
| MspI | CCGG | 1 cut(s) | 102 |
| MspR9I | CCNGG | 2 cut(s) | 75, 135 |
| MvaI | CCWGG | 2 cut(s) | 75, 135 |
| NmuCI | GTSAC | 1 cut(s) | 106 |
| OliI | CACNNNNGTG | 1 cut(s) | 126 |
| PdmI | GAANNNNTTC | 1 cut(s) | 60 |
| PkrI | GCNGC | 1 cut(s) | 182 |
| PleI | GAGTC | 2 cut(s) | 39, 113 |
| PpsI | GAGTC | 2 cut(s) | 39, 113 |
| Psp6I | CCWGG | 2 cut(s) | 73, 133 |
| PspGI | CCWGG | 2 cut(s) | 73, 133 |
| RsaI | GTAC | 1 cut(s) | 132 |
| RsaNI | GTAC | 1 cut(s) | 131 |
| RseI | CAYNNNNRTG | 1 cut(s) | 126 |
| SatI | GCNGC | 1 cut(s) | 181 |
| SchI | GAGTC | 2 cut(s) | 39, 114 |
| ScrFI | CCNGG | 2 cut(s) | 75, 135 |
| SetI | ASST | 6 cut(s) | 76, 126, 136, 169, 190, 224 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 126 |
| SsiI | CCGC | 1 cut(s) | 180 |
| StyD4I | CCNGG | 2 cut(s) | 73, 133 |
| StyI | CCWWGG | 1 cut(s) | 124 |
| TaaI | ACNGT | 1 cut(s) | 52 |
| TaqI | TCGA | 1 cut(s) | 24 |
| TaqII | GACCGA | 2 cut(s) | 20, 169 |
| TauI | GCSGC | 1 cut(s) | 183 |
| TseFI | GTSAC | 1 cut(s) | 106 |
| Tsp45I | GTSAC | 1 cut(s) | 106 |
| XmnI | GAANNNNTTC | 1 cut(s) | 60 |