Rw7G027970

serine threonine-protein phosphatase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0002717
Physical Location & Seq
Reverse (-)
37111060 .. 37114810
3751 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G027970.1

Sequence Viewer

Length: 894 bp
ATGACCATTGTGATTTACTTGATTTCAGGACTAGCTGGTGCCACAGCTGATGTGCACTGTTATGACGTCCTAACAAATAAATGGTCTAGGATCACTCCCTTTGGAGAACCACCAACACCGAGGGCAGCACATGTTGCAACTGCTGTAGGAACTATGGTTGTTATTTGGGTTAGCACAATGGAGGAATTGGTCCTGCTGGTTTGTCTGCTGAAGATCTACATGTTCTTGACCTCACTCAGCAACGGCCTTGATGGCACAGGCCCTGGACCAGGGCCACGCTACGGGCATGTGATGGTATTGGTGGGGCAAAGATATCTCATGGCAATTGATGGGAATGATGGTAAACGGCCTTTAGCTGATGTTTGGGCGCTGGACACAGCTGCCAAGCCATATGAATGGCATAAGTTGGAACCAGAGGCGGAGGGTCCACCACCATGCCTGTATGCAAGTGCAAGTGCAAGGTCGGATGGTCTTCTCCTCCTTTGTAGAGGGAGGGATGCAAACAGTGTGGTGAGACAGCCATTGGCAAGTGCATATGGCCTTGCCAAACATAGGGATGGCCGTTGGGAATGGGCAATTGCTCCTGGCGTCTCCCCTTCTCCCAGATATCAACATGCAGCAGTTTTTGTTAATGCACGCTTGCATGCTTCCGGAGGGGCCCTTGGTGGTGGGCGCATGGTTGAAGATTCATCAAGTGTTGCAGTGTTGGATACTGCAGCCGGGGTTTGGTGCGATACAAAATCTGTTGTCACGAGTCCAAGGACAGGTAGATACAGCGCTGATGCAGCTGGTGGAGATGCTGCAGTTGAATTGACACGGCGTTGCAGGCATGCAGCTGCTGCGGTTGGTGACCTGATAGTTATATACGGTGGTCTACGTGGTGGTAAGTTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Kelch_2 Kelch_4 Metallophos

Protein Analysis

297

Amino Acids

31.41

Weight (kDa)

8.2

Isoelectric Point (pI)

28.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_FBX42 PF13415 5 - 168 1.3e-15 FBX42, beta-propeller domain
Kelch_KLHDC2_KLHL20_DRC7 PF24681 13 - 219 1.6e-22 KLHDC2/KLHL20/DRC7 Kelch-repeats domain
Beta-prop_ATRN-LZTR1 PF24981 77 - 291 6e-06 Attractin/LZTR1 beta-propeller
Beta-prop_FBX42 PF13415 118 - 257 8.4e-10 FBX42, beta-propeller domain
Kelch_2 PF07646 201 - 248 1.1e-06 Kelch motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 892
AatII GACGTC 1 cut(s) 69
AccB1I GGYRCC 1 cut(s) 38
AccI GTMKAC 1 cut(s) 874
AccIII TCCGGA 1 cut(s) 650
AciI CCGC 2 cut(s) 419, 842
AclWI GGATC 1 cut(s) 98
AcoI YGGCCR 1 cut(s) 559
AcuI CTGAAG 1 cut(s) 230
AcyI GRCGYC 2 cut(s) 66, 588
AfeI AGCGCT 1 cut(s) 778
AfiI CCNNNNNNNGG 5 cut(s) 269, 281, 552, 726, 764
AflIII ACRYGT 2 cut(s) 130, 219
AgsI TTSAA 2 cut(s) 683, 809
AjnI CCWGG 3 cut(s) 262, 268, 583
AluBI AGCT 6 cut(s) 35, 47, 356, 380, 788, 836
AluI AGCT 6 cut(s) 35, 47, 356, 380, 788, 836
Alw21I GWGCWC 1 cut(s) 57
Alw26I GTCTC 2 cut(s) 508, 595
Alw44I GTGCAC 1 cut(s) 53
AlwI GGATC 1 cut(s) 98
AlwNI CAGNNNCTG 2 cut(s) 263, 839
Aor13HI TCCGGA 1 cut(s) 650
Aor51HI AGCGCT 1 cut(s) 778
AoxI GGCC 7 cut(s) 244, 259, 272, 347, 538, 559, 657
ApaI GGGCCC 1 cut(s) 661
ApaLI GTGCAC 1 cut(s) 53
ApeKI GCWGC 9 cut(s) 125, 380, 617, 716, 785, 800, 833, 836, 839
ArsI GACNNNNNNTTYG 2 cut(s) 68, 100
AspLEI GCGC 3 cut(s) 370, 675, 779
AspS9I GGNCC 7 cut(s) 190, 260, 266, 272, 425, 657, 658
AsuC2I CCSGG 1 cut(s) 721
AsuHPI GGTGA 2 cut(s) 523, 860
AvaII GGWCC 3 cut(s) 190, 266, 425
BaeGI GKGCMC 2 cut(s) 57, 661
BanI GGYRCC 1 cut(s) 38
BanII GRGCYC 1 cut(s) 661
BauI CACGAG 1 cut(s) 751
BbsI GAAGAC 1 cut(s) 464
Bbv12I GWGCWC 1 cut(s) 57
BbvI GCAGC 9 cut(s) 137, 367, 629, 728, 787, 797, 823, 826, 845
BccI CCATC 6 cut(s) 245, 286, 323, 332, 461, 551
BceAI ACGGC 4 cut(s) 259, 362, 546, 833
BciT130I CCWGG 3 cut(s) 264, 270, 585
BciVI GTATCC 1 cut(s) 703
BcnI CCSGG 1 cut(s) 721
BcoDI GTCTC 2 cut(s) 508, 595
BfaI CTAG 2 cut(s) 32, 87
BfmI CTRYAG 3 cut(s) 144, 714, 801
BfoI RGCGCY 2 cut(s) 371, 780
BfuI GTATCC 1 cut(s) 703
BglI GCCNNNNNGGC 1 cut(s) 252
BglII AGATCT 1 cut(s) 213
BisI GCNGC 9 cut(s) 126, 381, 618, 717, 786, 801, 834, 837, 840
BlsI GCNGC 9 cut(s) 127, 382, 619, 718, 787, 802, 835, 838, 841
Bme1390I CCNGG 4 cut(s) 264, 270, 585, 721
Bme18I GGWCC 3 cut(s) 190, 266, 425
BmgT120I GGNCC 7 cut(s) 190, 260, 266, 272, 425, 657, 658
BmiI GGNNCC 5 cut(s) 40, 411, 426, 658, 659
BmrFI CCNGG 4 cut(s) 264, 270, 585, 721
BmsI GCATC 3 cut(s) 487, 772, 787
BpiI GAAGAC 1 cut(s) 464
BpuMI CCSGG 1 cut(s) 721
BsaAI YACGTR 1 cut(s) 878
BsaHI GRCGYC 2 cut(s) 66, 588
BsaJI CCNNGG 6 cut(s) 119, 262, 269, 661, 720, 758
BsaWI WCCGGW 1 cut(s) 650
Bsc4I CCNNNNNNNGG 5 cut(s) 269, 281, 552, 726, 764
BseAI TCCGGA 1 cut(s) 650
BseBI CCWGG 3 cut(s) 264, 270, 585
BseDI CCNNGG 6 cut(s) 119, 262, 269, 661, 720, 758
BseGI GGATG 3 cut(s) 472, 502, 562
BseLI CCNNNNNNNGG 5 cut(s) 269, 281, 552, 726, 764
BseMII CTCAG 1 cut(s) 250
BseRI GAGGAG 1 cut(s) 467
BseSI GKGCMC 2 cut(s) 57, 661
BseXI GCAGC 9 cut(s) 137, 367, 629, 728, 787, 797, 823, 826, 845
BshFI GGCC 7 cut(s) 246, 261, 274, 349, 540, 561, 659
BshNI GGYRCC 1 cut(s) 38
BsiHKAI GWGCWC 1 cut(s) 57
BsiSI CCGG 2 cut(s) 651, 720
BslI CCNNNNNNNGG 5 cut(s) 269, 281, 552, 726, 764
BsmAI GTCTC 2 cut(s) 508, 595
BsmBI CGTCTC 1 cut(s) 595
BsnI GGCC 7 cut(s) 246, 261, 274, 349, 540, 561, 659
Bsp120I GGGCCC 1 cut(s) 657
Bsp1286I GDGCHC 2 cut(s) 57, 661
Bsp13I TCCGGA 1 cut(s) 650
Bsp143I GATC 2 cut(s) 90, 213
BspACI CCGC 2 cut(s) 419, 842
BspANI GGCC 7 cut(s) 246, 261, 274, 349, 540, 561, 659
BspCNI CTCAG 1 cut(s) 249
BspEI TCCGGA 1 cut(s) 650
BspLI GGNNCC 5 cut(s) 40, 411, 426, 658, 659
BspMAI CTGCAG 2 cut(s) 718, 805
BspPI GGATC 1 cut(s) 98
BspT107I GGYRCC 1 cut(s) 38
BssECI CCNNGG 6 cut(s) 119, 262, 269, 661, 720, 758
BssMI GATC 2 cut(s) 90, 213
BssNI GRCGYC 2 cut(s) 66, 588
BssSI CACGAG 1 cut(s) 751
BssT1I CCWWGG 2 cut(s) 661, 758
Bst2BI CACGAG 1 cut(s) 751
Bst2UI CCWGG 3 cut(s) 264, 270, 585
Bst4CI ACNGT 3 cut(s) 59, 506, 869
BstACI GRCGYC 2 cut(s) 66, 588
BstAPI GCANNNNNTGC 2 cut(s) 134, 839
BstBAI YACGTR 1 cut(s) 878
BstC8I GCNNGC 5 cut(s) 637, 641, 645, 827, 831
BstDEI CTNAG 1 cut(s) 236
BstEII GGTNACC 1 cut(s) 848
BstENI CCTNNNNNAGG 1 cut(s) 267
BstF5I GGATG 3 cut(s) 472, 502, 562
BstH2I RGCGCY 2 cut(s) 371, 780
BstHHI GCGC 3 cut(s) 370, 675, 779
BstKTI GATC 2 cut(s) 93, 216
BstMAI GTCTC 2 cut(s) 508, 595
BstMBI GATC 2 cut(s) 90, 213
BstMWI GCNNNNNNNGC 5 cut(s) 134, 252, 785, 826, 839
BstNI CCWGG 3 cut(s) 264, 270, 585
BstNSI RCATGY 6 cut(s) 134, 223, 290, 617, 647, 833
BstPI GGTNACC 1 cut(s) 848
BstSCI CCNGG 4 cut(s) 262, 268, 583, 719
BstSFI CTRYAG 3 cut(s) 144, 714, 801
BstSLI GKGCMC 2 cut(s) 57, 661
BstV1I GCAGC 9 cut(s) 137, 367, 629, 728, 787, 797, 823, 826, 845
BstV2I GAAGAC 1 cut(s) 464
BstX2I RGATCY 1 cut(s) 213
BstXI CCANNNNNNTGG 1 cut(s) 396
BstYI RGATCY 1 cut(s) 213
BsuI GTATCC 1 cut(s) 703
BsuRI GGCC 7 cut(s) 246, 261, 274, 349, 540, 561, 659
BtsCI GGATG 3 cut(s) 472, 502, 562
BtsI GCAGTG 1 cut(s) 708
BtsIMutI CAGTG 3 cut(s) 55, 511, 708
Cac8I GCNNGC 5 cut(s) 637, 641, 645, 827, 831
CaiI CAGNNNCTG 2 cut(s) 263, 839
CfoI GCGC 3 cut(s) 370, 675, 779
Cfr13I GGNCC 7 cut(s) 190, 260, 266, 272, 425, 657, 658
CseI GACGC 1 cut(s) 577
CspCI CAANNNNNGTGG 2 cut(s) 489, 524
CviAII CATG 9 cut(s) 131, 220, 287, 319, 435, 614, 644, 676, 830
DdeI CTNAG 1 cut(s) 236
DpnI GATC 2 cut(s) 92, 215
DpnII GATC 2 cut(s) 90, 213
EaeI YGGCCR 1 cut(s) 559
EciI GGCGGA 1 cut(s) 434
Eco130I CCWWGG 2 cut(s) 661, 758
Eco24I GRGCYC 1 cut(s) 661
Eco32I GATATC 2 cut(s) 314, 608
Eco47I GGWCC 3 cut(s) 190, 266, 425
Eco47III AGCGCT 1 cut(s) 778
Eco57I CTGAAG 1 cut(s) 230
Eco91I GGTNACC 1 cut(s) 848
EcoNI CCTNNNNNAGG 1 cut(s) 267
EcoO109I RGGNCCY 3 cut(s) 260, 657, 658
EcoO65I GGTNACC 1 cut(s) 848
EcoRII CCWGG 3 cut(s) 262, 268, 583
EcoRV GATATC 2 cut(s) 314, 608
EcoT14I CCWWGG 2 cut(s) 661, 758
EcoT38I GRGCYC 1 cut(s) 661
ErhI CCWWGG 2 cut(s) 661, 758
Esp3I CGTCTC 1 cut(s) 595
FaeI CATG 9 cut(s) 134, 223, 290, 322, 438, 617, 647, 679, 833
FatI CATG 9 cut(s) 130, 219, 286, 318, 434, 613, 643, 675, 829
FauNDI CATATG 2 cut(s) 391, 535
FblI GTMKAC 1 cut(s) 874
Fnu4HI GCNGC 9 cut(s) 126, 381, 618, 717, 786, 801, 834, 837, 840
FokI GGATG 3 cut(s) 479, 509, 569
FriOI GRGCYC 1 cut(s) 661
Fsp4HI GCNGC 9 cut(s) 126, 381, 618, 717, 786, 801, 834, 837, 840
FspBI CTAG 2 cut(s) 32, 87
GlaI GCGC 3 cut(s) 369, 674, 778
GluI GCNGC 9 cut(s) 126, 381, 618, 717, 786, 801, 834, 837, 840
HaeII RGCGCY 2 cut(s) 371, 780
HaeIII GGCC 7 cut(s) 246, 261, 274, 349, 540, 561, 659
HapII CCGG 2 cut(s) 651, 720
HgaI GACGC 1 cut(s) 577
HhaI GCGC 3 cut(s) 370, 675, 779
Hin1I GRCGYC 2 cut(s) 66, 588
Hin1II CATG 9 cut(s) 134, 223, 290, 322, 438, 617, 647, 679, 833
Hin6I GCGC 3 cut(s) 368, 673, 777
HinP1I GCGC 3 cut(s) 368, 673, 777
HinfI GANTC 2 cut(s) 686, 754
HpaII CCGG 2 cut(s) 651, 720
HphI GGTGA 2 cut(s) 523, 860
Hpy166II GTNNAC 4 cut(s) 55, 344, 428, 875
Hpy188I TCNGA 1 cut(s) 466
Hpy188III TCNNGA 4 cut(s) 27, 226, 651, 751
Hpy8I GTNNAC 4 cut(s) 55, 344, 428, 875
HpyAV CCTTC 1 cut(s) 606
HpyCH4III ACNGT 3 cut(s) 59, 506, 869
HpyCH4IV ACGT 2 cut(s) 66, 877
HpyF10VI GCNNNNNNNGC 5 cut(s) 134, 252, 785, 826, 839
HpyF3I CTNAG 1 cut(s) 236
HpySE526I ACGT 2 cut(s) 66, 877
Hsp92I GRCGYC 2 cut(s) 66, 588
Hsp92II CATG 9 cut(s) 134, 223, 290, 322, 438, 617, 647, 679, 833
HspAI GCGC 3 cut(s) 368, 673, 777
Kpn2I TCCGGA 1 cut(s) 650
Kzo9I GATC 2 cut(s) 90, 213
LmnI GCTCC 1 cut(s) 586
Lsp1109I GCAGC 9 cut(s) 137, 367, 629, 728, 787, 797, 823, 826, 845
LweI GCATC 3 cut(s) 487, 772, 787
MaeI CTAG 2 cut(s) 32, 87
MaeII ACGT 2 cut(s) 66, 877
MaeIII GTNAC 2 cut(s) 748, 848
MalI GATC 2 cut(s) 92, 215
MboI GATC 2 cut(s) 90, 213
MboII GAAGA 3 cut(s) 223, 464, 695
MfeI CAATTG 2 cut(s) 324, 576
MflI RGATCY 1 cut(s) 213
MhlI GDGCHC 2 cut(s) 57, 661
MluCI AATT 4 cut(s) 185, 324, 576, 809
MlyI GAGTC 1 cut(s) 763
MmeI TCCRAC 3 cut(s) 387, 444, 687
MnlI CCTC 9 cut(s) 114, 175, 241, 409, 415, 482, 486, 488, 647
MroI TCCGGA 1 cut(s) 650
MseI TTAA 1 cut(s) 630
MslI CAYNNNNRTG 4 cut(s) 60, 394, 433, 555
MspA1I CMGCKG 4 cut(s) 47, 380, 788, 836
MspI CCGG 2 cut(s) 651, 720
MspR9I CCNGG 4 cut(s) 264, 270, 585, 721
MunI CAATTG 2 cut(s) 324, 576
MvaI CCWGG 3 cut(s) 264, 270, 585
MwoI GCNNNNNNNGC 5 cut(s) 134, 252, 785, 826, 839
NciI CCSGG 1 cut(s) 721
NdeI CATATG 2 cut(s) 391, 535
NdeII GATC 2 cut(s) 90, 213
NlaIII CATG 9 cut(s) 134, 223, 290, 322, 438, 617, 647, 679, 833
NlaIV GGNNCC 5 cut(s) 40, 411, 426, 658, 659
NmuCI GTSAC 2 cut(s) 748, 848
NspI RCATGY 6 cut(s) 134, 223, 290, 617, 647, 833
PaeI GCATGC 2 cut(s) 647, 833
PciI ACATGT 2 cut(s) 130, 219
PfeI GAWTC 1 cut(s) 686
PkrI GCNGC 9 cut(s) 127, 382, 619, 718, 787, 802, 835, 838, 841
PleI GAGTC 1 cut(s) 762
PpsI GAGTC 1 cut(s) 762
Ppu21I YACGTR 1 cut(s) 878
PscI ACATGT 2 cut(s) 130, 219
PsiI TTATAA 1 cut(s) 892
Psp6I CCWGG 3 cut(s) 262, 268, 583
PspEI GGTNACC 1 cut(s) 848
PspGI CCWGG 3 cut(s) 262, 268, 583
PspN4I GGNNCC 5 cut(s) 40, 411, 426, 658, 659
PspOMI GGGCCC 1 cut(s) 657
PspPI GGNCC 7 cut(s) 190, 260, 266, 272, 425, 657, 658
PstI CTGCAG 2 cut(s) 718, 805
PstNI CAGNNNCTG 2 cut(s) 263, 839
PsuI RGATCY 1 cut(s) 213
PvuII CAGCTG 4 cut(s) 47, 380, 788, 836
RseI CAYNNNNRTG 4 cut(s) 60, 394, 433, 555
SaqAI TTAA 1 cut(s) 630
SatI GCNGC 9 cut(s) 126, 381, 618, 717, 786, 801, 834, 837, 840
Sau3AI GATC 2 cut(s) 90, 213
Sau96I GGNCC 7 cut(s) 190, 260, 266, 272, 425, 657, 658
SchI GAGTC 1 cut(s) 763
ScrFI CCNGG 4 cut(s) 264, 270, 585, 721
SduI GDGCHC 2 cut(s) 57, 661
SfaNI GCATC 3 cut(s) 487, 772, 787
SfcI CTRYAG 3 cut(s) 144, 714, 801
SinI GGWCC 3 cut(s) 190, 266, 425
SmiMI CAYNNNNRTG 4 cut(s) 60, 394, 433, 555
SphI GCATGC 2 cut(s) 647, 833
Sse9I AATT 4 cut(s) 185, 324, 576, 809
SsiI CCGC 2 cut(s) 419, 842
SspMI CTAG 2 cut(s) 32, 87
StyD4I CCNGG 4 cut(s) 262, 268, 583, 719
StyI CCWWGG 2 cut(s) 661, 758
TaaI ACNGT 3 cut(s) 59, 506, 869
TaiI ACGT 2 cut(s) 69, 880
TasI AATT 4 cut(s) 185, 324, 576, 809
TfiI GAWTC 1 cut(s) 686
Tru1I TTAA 1 cut(s) 630
Tru9I TTAA 1 cut(s) 630
TscAI CASTG 3 cut(s) 62, 511, 708
TseFI GTSAC 2 cut(s) 748, 848
TseI GCWGC 9 cut(s) 125, 380, 617, 716, 785, 800, 833, 836, 839
Tsp45I GTSAC 2 cut(s) 748, 848
TspDTI ATGAA 2 cut(s) 408, 678
TspRI CASTG 3 cut(s) 62, 511, 708
VneI GTGCAC 1 cut(s) 53
VpaK11BI GGWCC 3 cut(s) 190, 266, 425
XagI CCTNNNNNAGG 1 cut(s) 267
XceI RCATGY 6 cut(s) 134, 223, 290, 617, 647, 833
XmiI GTMKAC 1 cut(s) 874
XspI CTAG 2 cut(s) 32, 87
ZraI GACGTC 1 cut(s) 67
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.