AT1G53390

ABC transporter

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
19917994 .. 19923920
5927 bp
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UTR
Exon/CDS
Intron
AT1G53390.1

Sequence Viewer

Length: 3330 bp
ATGAACTTCAATACTTCACTAGTCATAATGCTTTTGAATCTCAAGATGAGTGTGGACCGGCGAAATTGGCTTAAACATGGATGTAATCTCAGATTGGTTATCTTAGTTCTGTGGTTGGTTTGTTATGTTAGTAATGGTCAAACTATTGGGGACACCAGTGACTTCAACAATCCAGCTGTTCTTCCGCTCGTTACTCAGATGGTTTACCGCAGTCTTTCTAATAGCACTGCTGCTCTTAATCGCGAGCTCGGTATCAGAGCAAAGTTTTGCGTCAAAGACCCGGATGCTGATTGGAATAGAGCTTTTAATTTCTCCTCCAACTTGAATTTCTTATCTTCTTGCATTAAGAAAACCCAAGGTAGTATTGGTAAGCGTATCTGTACAGCAGCAGAGATGAAGTTCTATTTTAATGGTTTCTTCAATAAAACGAATAACCCGGGCTACTTGAAACCAAATGTAAACTGCAACTTGACTTCATGGGTCTCTGGTTGTGAACCTGGATGGGGCTGTAGTGTTGATCCAACCGAACAAGTCGATCTGCAAAACTCCAAAGATTTTCCTGAAAGAAGAAGAAACTGTATGCCTTGCTGCGAAGGGTTTTTCTGCCCCCGTGGCCTCACTTGTATGATACCTTGCCCCCTTGGTGCTCATTGCCCCTTAGCTACCCTTAATAAAACTACAAGCTTATGTGAACCGTATACTTATCAATTACCATCAGGACGACCAAACCACACTTGTGGAGGTGCAAATGTATGGGCCGATATCAGATCCAGCGGTGAAGTATTCTGTTCCGCAGGATCATATTGTCCAACCACAACCCAAAAAGTACCTTGTGATAGTGGGCACTACTGCAGGATGGGGTCTACTTCTGAGAAACCCTGCTTTAAGTTGACGTCCTGCAATCCTAACACAGCAAATCAGAACATGCATGCATTTGGGATTATGGTTATCGCTGCAGTGAGTACTATTCTACTCATTATCTACAATTGTTCCGATCAAATCCTAACAACTAGGGAAAGGAGGCAGGCAAAATCAAGGGAAGCAGCGGTGAAGAAAGCGAGAGCTCATCATAGATGGAAAGCTGCTAGAGAGGCTGCTAAAAAGCATGTGAGTGGGATCCGTGCGCAAATAACTCGGACATTTTCAGGTAAAAGAGCCAATCAAGATGGGGATACCAACAAGATGTTGGGTCGTGGGGACTCTTCAGAAATAGATGAAGCTATAGACATGTCCACATGTTCAAGTCCTGCGAGTTCCTCTGCTGCACAATCTAGTTATGAGAATGAGGATCATGCAGCCGCTGGGAGTAATGGAAGAGCAAGTCTTGGCATAGAAGGAAAGAGAGTAAAAGGACAGACTTTGGCCAAAATTAAGAAAACACAAAGCCAAATCTTCAAGTATGCTTATGATCGGATTGAAAAGGAGAAAGCCATGGAGCAAGAGAATAAAAATCTCACATTTTCAGGAATAGTCAAAATGGCTACCAATTCTGAGACGAGAAAGAGGCATCTCATGGAGCTTTCTTTCAAAGATTTAACTCTTACATTGAAATCCAATGGTAAGCAAGTGTTAAGATGTGTCACAGGAAGTATGAAACCAGGTCGGATCACAGCTGTGATGGGTCCATCAGGAGCAGGAAAGACAAGTCTTCTTTCTGCTTTGGCTGGGAAAGCTGTCGGATGCAAATTAAGTGGTTTGATTCTTATAAATGGGAAGCAGGAATCAATCCACTCATATAAAAAAATTATTGGCTTTGTGCCACAAGATGACGTTGTTCATGGAAACTTAACAGTAGAGGAAAATCTTTGGTTCCATGCTAAATGCAGATTACCTGCGGATCTATCCAAAGCAGACAAAGTTCTTGTGGTTGAAAGAATCATTGACTCCTTGGGGCTACAAGCTGTGAGGAGTTCTTTAGTTGGTACTGTAGAGAAGCGGGGAATCTCAGGAGGGCAGAGGAAACGAGTGAATGTGGGTTTAGAGATGGTAATGGAGCCTTCGGTTTTATTCTTGGATGAACCTACTTCTGGCTTGGATAGTGCCTCATCACAGCTTCTTCTTAGAGCACTTCGGCATGAAGCTCTCGAGGGAGTAAATATTTGCATGGTTGTTCACCAACCAAGTTATACTTTGTTCAAAACGTTCAATGATCTAGTACTTCTCGCGAAAGGTGGCCTTACTGTTTACCACGGATCAGTCAACAAAGTTGAGGAATACTTCTCGGGTCTGGGGATACATGTTCCAGACCGTATCAACCCTCCTGACTATTACATCGATGTTCTGGAAGGAGTAGTGATTTCAATGGGAAATTCTGGTATTGGTTACAAAGAGCTTCCTCAAAGGTGGATGCTTCACAAAGGGTACTCGGTTCCATTAGATATGCGGAACAACAGTGCTGCTGGACTTGAAACGAATCCAGACTTAGGTACTAATTCACCAGATAATGCAGAACAAACATTTGCGAGAGAGCTGTGGCGGGATGTGAAGAGTAATTTCAGGTTGCGTCGTGATAAAATACGGCATAACTTCTTAAAGTCTAGAGATTTATCCCACAGAAGAACCCCTAGTACGTGGCTGCAATACAAATATTTCCTTGGAAGGATAGCGAAGCAGCGAATGAGAGAAGCTCAATTACAAGCCACAGACTATTTGATATTGTTGCTTGCTGGAGCTTGTTTAGGATCACTGATTAAAGCAAGTGATGAGAGCTTTGGAGCTCCTGGTTATATTTATACTATTATCGCAGTCTCTCTTCTTTGCAAAATAGCAGCTTTAAGATCATTCTCACTAGACAAGTTACATTACTGGAGAGAAAGTGCTTCAGGGATGAGTAGTTCGGCCTGCTTCCTTGCCAAAGATACAATAGACATTTTCAATATACTTGTCAAGCCATTGGTCTATCTCTCCATGTTCTATTTCTTCACGAACCCAAGATCCACATTTTTCGATAACTATATTGTTTTGGTCTGTCTCGTATATTGTGTGACCGGTATTGCATATGCGTTGGCTATCTTTCTCCAACCGAGCACAGCCCAGCTGTTTTCTGTTCTTCTTCCAGTCGTTTTAACACTTGTTGCAACCCAACCGAAGAATAGTGAACTTATCAGGATCATAGCTGATTTGAGTTATCCAAAGTGGGCTTTGGAAGCATTTGTGATAGGAAATGCTCAAAAGTACTATGGAGTATGGATGATTACTCGATGTGGATCGCTTATGAAGAGTGGCTACGACATTAATAAATGGAGTCTGTGTATAATGATATTGCTTCTCGTAGGTTTGACCACTCGTGGAGTTGCCTTTGTGGGGATGCTCATACTTCAAAAGAAGTGA

Protein Analysis

1109

Amino Acids

122.88

Weight (kDa)

9.31

Isoelectric Point (pI)

39.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_tran PF00005 527 - 676 1.2e-23 ABC transporter
ABC2_membrane_7 PF19055 705 - 1109 3.1e-209 ABC-2 type transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1706
AatII GACGTC 1 cut(s) 896
Acc16I TGCGCA 1 cut(s) 1125
Acc36I ACCTGC 1 cut(s) 1840
AccBSI CCGCTC 1 cut(s) 187
AccI GTMKAC 2 cut(s) 698, 863
AccII CGCG 2 cut(s) 243, 2165
AclI AACGTT 1 cut(s) 2141
AcoI YGGCCR 1 cut(s) 1362
AcsI RAATTY 2 cut(s) 325, 2308
AcuI CTGAAG 2 cut(s) 1188, 2805
AcyI GRCGYC 1 cut(s) 893
AfaI GTAC 9 cut(s) 382, 828, 964, 1924, 2157, 2363, 2428, 2569, 3176
AfiI CCNNNNNNNGG 4 cut(s) 503, 2027, 2423, 3303
AflIII ACRYGT 3 cut(s) 1227, 1235, 2236
AgeI ACCGGT 1 cut(s) 2987
AhlI ACTAGT 1 cut(s) 19
AjnI CCWGG 3 cut(s) 496, 1597, 2719
AjuI GAANNNNNNNTTGG 2 cut(s) 311, 343
AleI CACNNNNGTG 2 cut(s) 735, 1613
AloI GAACNNNNNNTCC 4 cut(s) 2818, 2850, 2918, 2950
Alw21I GWGCWC 6 cut(s) 249, 649, 1066, 2068, 2719, 3029
Alw26I GTCTC 4 cut(s) 487, 1487, 2752, 2975
AlwNI CAGNNNCTG 1 cut(s) 1301
Ama87I CYCGRG 3 cut(s) 436, 2084, 2221
AoxI GGCC 5 cut(s) 613, 756, 1362, 2173, 2838
ApoI RAATTY 2 cut(s) 325, 2308
AseI ATTAAT 1 cut(s) 3234
AsiGI ACCGGT 1 cut(s) 2987
AspLEI GCGC 1 cut(s) 1126
AspS9I GGNCC 3 cut(s) 55, 756, 1622
AsuC2I CCSGG 3 cut(s) 281, 437, 438
AsuHPI GGTGA 4 cut(s) 788, 1060, 2105, 2427
AvaI CYCGRG 3 cut(s) 436, 2084, 2221
AvaII GGWCC 2 cut(s) 55, 1622
BaeGI GKGCMC 1 cut(s) 846
BalI TGGCCA 1 cut(s) 1364
BamHI GGATCC 1 cut(s) 1116
BanII GRGCYC 3 cut(s) 249, 1066, 2719
BarI GAAGNNNNNNTAC 4 cut(s) 2616, 2648, 3209, 3241
BauI CACGAG 1 cut(s) 3285
BbsI GAAGAC 1 cut(s) 1640
Bbv12I GWGCWC 6 cut(s) 249, 649, 1066, 2068, 2719, 3029
BccI CCATC 9 cut(s) 193, 495, 721, 850, 1068, 1160, 1612, 1633, 1978
BceAI ACGGC 1 cut(s) 2534
BcgI CGANNNNNNTGC 2 cut(s) 1115, 1149
BciT130I CCWGG 3 cut(s) 498, 1599, 2721
BciVI GTATCC 2 cut(s) 1165, 2226
BcnI CCSGG 3 cut(s) 281, 437, 438
BcoDI GTCTC 4 cut(s) 487, 1487, 2752, 2975
BcuI ACTAGT 1 cut(s) 19
BfaI CTAG 8 cut(s) 20, 1011, 1086, 1272, 2153, 2538, 2565, 2789
BfmI CTRYAG 5 cut(s) 508, 850, 954, 1221, 1926
BfuAI ACCTGC 1 cut(s) 1840
BfuI GTATCC 2 cut(s) 1165, 2226
BglI GCCNNNNNGGC 1 cut(s) 612
BmcAI AGTACT 3 cut(s) 964, 2157, 3176
Bme1390I CCNGG 6 cut(s) 281, 437, 438, 498, 1599, 2721
Bme18I GGWCC 2 cut(s) 55, 1622
BmeT110I CYCGRG 3 cut(s) 436, 2084, 2221
BmgT120I GGNCC 3 cut(s) 55, 756, 1622
BmiI GGNNCC 5 cut(s) 1118, 1623, 1811, 1995, 2370
BmrFI CCNGG 6 cut(s) 281, 437, 438, 498, 1599, 2721
BmsI GCATC 5 cut(s) 274, 1516, 1670, 2337, 3297
BpiI GAAGAC 1 cut(s) 1640
BplI GAGNNNNNCTC 2 cut(s) 2611, 2643
BpmI CTGGAG 2 cut(s) 2688, 2827
Bpu10I CCTNAGC 1 cut(s) 658
BpuEI CTTGAG 1 cut(s) 26
BpuMI CCSGG 3 cut(s) 281, 437, 438
Bsa29I ATCGAT 1 cut(s) 2274
BsaAI YACGTR 1 cut(s) 2571
BsaBI GATNNNNATC 1 cut(s) 3205
BsaHI GRCGYC 1 cut(s) 893
BsaI GGTCTC 1 cut(s) 487
BsaJI CCNNGG 8 cut(s) 355, 436, 610, 640, 1431, 1887, 2188, 2593
BsaWI WCCGGW 1 cut(s) 2987
BsaXI ACNNNNNCTCC 4 cut(s) 2800, 2830, 3235, 3265
Bsc4I CCNNNNNNNGG 4 cut(s) 503, 2027, 2423, 3303
Bse118I RCCGGY 2 cut(s) 57, 2987
Bse1I ACTGG 3 cut(s) 156, 2810, 3056
Bse3DI GCAATG 1 cut(s) 649
Bse8I GATNNNNATC 1 cut(s) 3205
BseBI CCWGG 3 cut(s) 498, 1599, 2721
BseCI ATCGAT 1 cut(s) 2274
BseDI CCNNGG 8 cut(s) 355, 436, 610, 640, 1431, 1887, 2188, 2593
BseJI GATNNNNATC 1 cut(s) 3205
BseLI CCNNNNNNNGG 4 cut(s) 503, 2027, 2423, 3303
BseMI GCAATG 1 cut(s) 649
BseMII CTCAG 5 cut(s) 103, 209, 861, 1482, 1959
BseNI ACTGG 3 cut(s) 156, 2810, 3056
BseRI GAGGAG 2 cut(s) 304, 1921
BseSI GKGCMC 1 cut(s) 846
BseYI CCCAGC 3 cut(s) 1301, 1664, 3033
BsgI GTGCAG 1 cut(s) 1248
Bsh1236I CGCG 2 cut(s) 243, 2165
BshFI GGCC 5 cut(s) 615, 758, 1364, 2175, 2840
BshTI ACCGGT 1 cut(s) 2987
BshVI ATCGAT 1 cut(s) 2274
BsiHKAI GWGCWC 6 cut(s) 249, 649, 1066, 2068, 2719, 3029
BsiHKCI CYCGRG 3 cut(s) 436, 2084, 2221
BsiSI CCGG 4 cut(s) 58, 281, 437, 2988
BslFI GGGAC 2 cut(s) 164, 1211
BslI CCNNNNNNNGG 4 cut(s) 503, 2027, 2423, 3303
BsmAI GTCTC 4 cut(s) 487, 1487, 2752, 2975
BsmBI CGTCTC 1 cut(s) 1487
BsmFI GGGAC 2 cut(s) 164, 1211
BsnI GGCC 5 cut(s) 615, 758, 1364, 2175, 2840
Bso31I GGTCTC 1 cut(s) 487
BsoBI CYCGRG 3 cut(s) 436, 2084, 2221
Bsp1286I GDGCHC 7 cut(s) 249, 649, 846, 1066, 2068, 2719, 3029
Bsp1407I TGTACA 1 cut(s) 380
Bsp19I CCATGG 1 cut(s) 1431
Bsp68I TCGCGA 2 cut(s) 243, 2165
BspANI GGCC 5 cut(s) 615, 758, 1364, 2175, 2840
BspCNI CTCAG 5 cut(s) 102, 208, 862, 1483, 1958
BspDI ATCGAT 1 cut(s) 2274
BspFNI CGCG 2 cut(s) 243, 2165
BspLI GGNNCC 5 cut(s) 1118, 1623, 1811, 1995, 2370
BspMAI CTGCAG 2 cut(s) 854, 958
BspMI ACCTGC 1 cut(s) 1840
BspQI GCTCTTC 1 cut(s) 1309
BspTNI GGTCTC 1 cut(s) 487
BsrBI CCGCTC 1 cut(s) 187
BsrDI GCAATG 1 cut(s) 649
BsrFI RCCGGY 2 cut(s) 57, 2987
BsrGI TGTACA 1 cut(s) 380
BsrI ACTGG 3 cut(s) 156, 2810, 3056
BssAI RCCGGY 2 cut(s) 57, 2987
BssECI CCNNGG 8 cut(s) 355, 436, 610, 640, 1431, 1887, 2188, 2593
BssNAI GTATAC 1 cut(s) 699
BssNI GRCGYC 1 cut(s) 893
BssSI CACGAG 1 cut(s) 3285
BssT1I CCWWGG 5 cut(s) 355, 640, 1431, 1887, 2593
Bst1107I GTATAC 1 cut(s) 699
Bst2BI CACGAG 1 cut(s) 3285
Bst2UI CCWGG 3 cut(s) 498, 1599, 2721
Bst4CI ACNGT 7 cut(s) 578, 696, 1792, 1927, 2182, 2249, 2393
Bst6I CTCTTC 5 cut(s) 1207, 1309, 2480, 2757, 3212
BstACI GRCGYC 1 cut(s) 893
BstAUI TGTACA 1 cut(s) 380
BstBAI YACGTR 1 cut(s) 2571
BstC8I GCNNGC 5 cut(s) 245, 930, 1026, 2664, 2842
BstDEI CTNAG 9 cut(s) 89, 103, 195, 658, 870, 1491, 1945, 2060, 2422
BstDSI CCRYGG 3 cut(s) 610, 1431, 2188
BstFNI CGCG 2 cut(s) 243, 2165
BstHHI GCGC 1 cut(s) 1126
BstMAI GTCTC 4 cut(s) 487, 1487, 2752, 2975
BstMWI GCNNNNNNNGC 5 cut(s) 67, 612, 1091, 1670, 3146
BstNI CCWGG 3 cut(s) 498, 1599, 2721
BstNSI RCATGY 6 cut(s) 928, 932, 1109, 1231, 1239, 2240
BstSCI CCNGG 6 cut(s) 279, 435, 436, 496, 1597, 2719
BstSFI CTRYAG 5 cut(s) 508, 850, 954, 1221, 1926
BstSLI GKGCMC 1 cut(s) 846
BstUI CGCG 2 cut(s) 243, 2165
BstV2I GAAGAC 1 cut(s) 1640
BstX2I RGATCY 4 cut(s) 767, 1116, 1837, 2933
BstXI CCANNNNNNTGG 1 cut(s) 737
BstYI RGATCY 4 cut(s) 767, 1116, 1837, 2933
BstZ17I GTATAC 1 cut(s) 699
Bsu15I ATCGAT 1 cut(s) 2274
BsuI GTATCC 2 cut(s) 1165, 2226
BsuRI GGCC 5 cut(s) 615, 758, 1364, 2175, 2840
BsuTUI ATCGAT 1 cut(s) 2274
BtgI CCRYGG 3 cut(s) 610, 1431, 2188
BtsI GCAGTG 2 cut(s) 225, 963
BtsIMutI CAGTG 5 cut(s) 163, 225, 963, 2398, 2684
BtuMI TCGCGA 2 cut(s) 243, 2165
BveI ACCTGC 1 cut(s) 1840
Cac8I GCNNGC 5 cut(s) 245, 930, 1026, 2664, 2842
CaiI CAGNNNCTG 1 cut(s) 1301
CfoI GCGC 1 cut(s) 1126
Cfr10I RCCGGY 2 cut(s) 57, 2987
Cfr13I GGNCC 3 cut(s) 55, 756, 1622
Cfr9I CCCGGG 1 cut(s) 436
ClaI ATCGAT 1 cut(s) 2274
CseI GACGC 2 cut(s) 259, 2492
CsiI ACCWGGT 1 cut(s) 1597
Csp6I GTAC 9 cut(s) 381, 827, 963, 1923, 2156, 2362, 2427, 2568, 3175
CspAI ACCGGT 1 cut(s) 2987
CspCI CAANNNNNGTGG 2 cut(s) 1672, 1707
CviQI GTAC 9 cut(s) 381, 827, 963, 1923, 2156, 2362, 2427, 2568, 3175
DdeI CTNAG 9 cut(s) 89, 103, 195, 658, 870, 1491, 1945, 2060, 2422
EaeI YGGCCR 1 cut(s) 1362
Eam1104I CTCTTC 5 cut(s) 1207, 1309, 2480, 2757, 3212
EarI CTCTTC 5 cut(s) 1207, 1309, 2480, 2757, 3212
Ecl136II GAGCTC 3 cut(s) 247, 1064, 2717
Eco130I CCWWGG 5 cut(s) 355, 640, 1431, 1887, 2593
Eco24I GRGCYC 3 cut(s) 249, 1066, 2719
Eco31I GGTCTC 1 cut(s) 487
Eco32I GATATC 1 cut(s) 763
Eco47I GGWCC 2 cut(s) 55, 1622
Eco53kI GAGCTC 3 cut(s) 247, 1064, 2717
Eco57I CTGAAG 2 cut(s) 1188, 2805
Eco88I CYCGRG 3 cut(s) 436, 2084, 2221
EcoICRI GAGCTC 3 cut(s) 247, 1064, 2717
EcoRII CCWGG 3 cut(s) 496, 1597, 2719
EcoRV GATATC 1 cut(s) 763
EcoT14I CCWWGG 5 cut(s) 355, 640, 1431, 1887, 2593
EcoT22I ATGCAT 2 cut(s) 930, 934
EcoT38I GRGCYC 3 cut(s) 249, 1066, 2719
ErhI CCWWGG 5 cut(s) 355, 640, 1431, 1887, 2593
Esp3I CGTCTC 1 cut(s) 1487
FalI AAGNNNNNCTT 4 cut(s) 2113, 2145, 2160, 2192
FaqI GGGAC 2 cut(s) 164, 1211
FauI CCCGC 2 cut(s) 1929, 2469
FauNDI CATATG 1 cut(s) 2998
FblI GTMKAC 2 cut(s) 698, 863
FriOI GRGCYC 3 cut(s) 249, 1066, 2719
FspBI CTAG 8 cut(s) 20, 1011, 1086, 1272, 2153, 2538, 2565, 2789
FspI TGCGCA 1 cut(s) 1125
GlaI GCGC 1 cut(s) 1125
GsaI CCCAGC 3 cut(s) 1305, 1668, 3037
GsuI CTGGAG 2 cut(s) 2688, 2827
HaeIII GGCC 5 cut(s) 615, 758, 1364, 2175, 2840
HapII CCGG 4 cut(s) 58, 281, 437, 2988
HgaI GACGC 2 cut(s) 259, 2492
HhaI GCGC 1 cut(s) 1126
Hin1I GRCGYC 1 cut(s) 893
Hin6I GCGC 1 cut(s) 1124
HinP1I GCGC 1 cut(s) 1124
HincII GTYRAC 2 cut(s) 891, 2200
HindII GTYRAC 2 cut(s) 891, 2200
HindIII AAGCTT 1 cut(s) 682
HinfI GANTC 9 cut(s) 37, 1199, 1699, 1721, 1875, 1883, 1941, 2413, 3244
HpaII CCGG 4 cut(s) 58, 281, 437, 2988
HphI GGTGA 4 cut(s) 788, 1060, 2105, 2427
Hpy99I CGWCG 1 cut(s) 2508
HpyAV CCTTC 5 cut(s) 587, 1328, 2007, 2279, 2592
HpyCH4III ACNGT 7 cut(s) 578, 696, 1792, 1927, 2182, 2249, 2393
HpyCH4IV ACGT 4 cut(s) 893, 1770, 2141, 2570
HpyF10VI GCNNNNNNNGC 5 cut(s) 67, 612, 1091, 1670, 3146
HpyF3I CTNAG 9 cut(s) 89, 103, 195, 658, 870, 1491, 1945, 2060, 2422
HpySE526I ACGT 4 cut(s) 893, 1770, 2141, 2570
Hsp92I GRCGYC 1 cut(s) 893
HspAI GCGC 1 cut(s) 1124
LguI GCTCTTC 1 cut(s) 1309
LmnI GCTCC 7 cut(s) 1435, 1516, 1631, 1993, 2669, 2714, 2722
LweI GCATC 5 cut(s) 274, 1516, 1670, 2337, 3297
MabI ACCWGGT 1 cut(s) 1597
MaeI CTAG 8 cut(s) 20, 1011, 1086, 1272, 2153, 2538, 2565, 2789
MaeII ACGT 4 cut(s) 893, 1770, 2141, 2570
MaeIII GTNAC 6 cut(s) 158, 190, 1579, 2321, 2796, 2983
MbiI CCGCTC 1 cut(s) 187
MfeI CAATTG 1 cut(s) 985
MflI RGATCY 4 cut(s) 767, 1116, 1837, 2933
MhlI GDGCHC 7 cut(s) 249, 649, 846, 1066, 2068, 2719, 3029
MlsI TGGCCA 1 cut(s) 1364
MluNI TGGCCA 1 cut(s) 1364
MlyI GAGTC 3 cut(s) 1193, 1877, 3253
MmeI TCCRAC 6 cut(s) 342, 545, 833, 1583, 1657, 3043
Mox20I TGGCCA 1 cut(s) 1364
Mph1103I ATGCAT 2 cut(s) 930, 934
MscI TGGCCA 1 cut(s) 1364
MslI CAYNNNNRTG 4 cut(s) 623, 735, 1110, 1613
Msp20I TGGCCA 1 cut(s) 1364
MspA1I CMGCKG 6 cut(s) 176, 774, 1046, 1301, 1613, 3037
MspI CCGG 4 cut(s) 58, 281, 437, 2988
MspR9I CCNGG 6 cut(s) 281, 437, 438, 498, 1599, 2721
MunI CAATTG 1 cut(s) 985
MvaI CCWGG 3 cut(s) 498, 1599, 2721
MvnI CGCG 2 cut(s) 243, 2165
MwoI GCNNNNNNNGC 5 cut(s) 67, 612, 1091, 1670, 3146
NciI CCSGG 3 cut(s) 281, 437, 438
NcoI CCATGG 1 cut(s) 1431
NdeI CATATG 1 cut(s) 2998
NlaIV GGNNCC 5 cut(s) 1118, 1623, 1811, 1995, 2370
NmuCI GTSAC 3 cut(s) 158, 1579, 2983
NruI TCGCGA 2 cut(s) 243, 2165
NsbI TGCGCA 1 cut(s) 1125
NsiI ATGCAT 2 cut(s) 930, 934
NspI RCATGY 6 cut(s) 928, 932, 1109, 1231, 1239, 2240
OliI CACNNNNGTG 2 cut(s) 735, 1613
PaeI GCATGC 1 cut(s) 932
PaeR7I CTCGAG 1 cut(s) 2084
PciI ACATGT 3 cut(s) 1227, 1235, 2236
PciSI GCTCTTC 1 cut(s) 1309
PfeI GAWTC 6 cut(s) 37, 1699, 1721, 1875, 1941, 2413
PinAI ACCGGT 1 cut(s) 2987
PleI GAGTC 3 cut(s) 1193, 1877, 3252
PpsI GAGTC 3 cut(s) 1193, 1877, 3252
Ppu21I YACGTR 1 cut(s) 2571
PscI ACATGT 3 cut(s) 1227, 1235, 2236
PshBI ATTAAT 1 cut(s) 3234
PsiI TTATAA 1 cut(s) 1706
Psp124BI GAGCTC 3 cut(s) 249, 1066, 2719
Psp1406I AACGTT 1 cut(s) 2141
Psp6I CCWGG 3 cut(s) 496, 1597, 2719
PspFI CCCAGC 3 cut(s) 1301, 1664, 3033
PspGI CCWGG 3 cut(s) 496, 1597, 2719
PspN4I GGNNCC 5 cut(s) 1118, 1623, 1811, 1995, 2370
PspPI GGNCC 3 cut(s) 55, 756, 1622
PsrI GAACNNNNNNTAC 2 cut(s) 2551, 2583
PstI CTGCAG 2 cut(s) 854, 958
PstNI CAGNNNCTG 1 cut(s) 1301
PsuI RGATCY 4 cut(s) 767, 1116, 1837, 2933
PvuII CAGCTG 3 cut(s) 176, 1613, 3037
RruI TCGCGA 2 cut(s) 243, 2165
RsaI GTAC 9 cut(s) 382, 828, 964, 1924, 2157, 2363, 2428, 2569, 3176
RsaNI GTAC 9 cut(s) 381, 827, 963, 1923, 2156, 2362, 2427, 2568, 3175
RseI CAYNNNNRTG 4 cut(s) 623, 735, 1110, 1613
SacI GAGCTC 3 cut(s) 249, 1066, 2719
SapI GCTCTTC 1 cut(s) 1309
Sau96I GGNCC 3 cut(s) 55, 756, 1622
ScaI AGTACT 3 cut(s) 964, 2157, 3176
SchI GAGTC 3 cut(s) 1193, 1877, 3253
ScrFI CCNGG 6 cut(s) 281, 437, 438, 498, 1599, 2721
SduI GDGCHC 7 cut(s) 249, 649, 846, 1066, 2068, 2719, 3029
SexAI ACCWGGT 1 cut(s) 1597
SfaNI GCATC 5 cut(s) 274, 1516, 1670, 2337, 3297
SfcI CTRYAG 5 cut(s) 508, 850, 954, 1221, 1926
Sfr274I CTCGAG 1 cut(s) 2084
SinI GGWCC 2 cut(s) 55, 1622
SlaI CTCGAG 1 cut(s) 2084
SmaI CCCGGG 1 cut(s) 438
SmiMI CAYNNNNRTG 4 cut(s) 623, 735, 1110, 1613
SmlI CTYRAG 2 cut(s) 41, 2084
SmoI CTYRAG 2 cut(s) 41, 2084
SpeI ACTAGT 1 cut(s) 19
SphI GCATGC 1 cut(s) 932
SspI AATATT 2 cut(s) 2098, 2588
SspMI CTAG 8 cut(s) 20, 1011, 1086, 1272, 2153, 2538, 2565, 2789
SstI GAGCTC 3 cut(s) 249, 1066, 2719
StyD4I CCNGG 6 cut(s) 279, 435, 436, 496, 1597, 2719
StyI CCWWGG 5 cut(s) 355, 640, 1431, 1887, 2593
TaaI ACNGT 7 cut(s) 578, 696, 1792, 1927, 2182, 2249, 2393
TaiI ACGT 4 cut(s) 896, 1773, 2144, 2573
TaqI TCGA 5 cut(s) 534, 2085, 2274, 2946, 3199
TatI WGTACW 4 cut(s) 380, 962, 2155, 3174
TauI GCSGC 1 cut(s) 1301
TfiI GAWTC 6 cut(s) 37, 1699, 1721, 1875, 1941, 2413
TscAI CASTG 5 cut(s) 163, 232, 963, 2398, 2691
TseFI GTSAC 3 cut(s) 158, 1579, 2983
Tsp45I GTSAC 3 cut(s) 158, 1579, 2983
TspDTI ATGAA 9 cut(s) 17, 410, 465, 1230, 1607, 1766, 2031, 2091, 3230
TspGWI ACGGA 2 cut(s) 1109, 2205
TspMI CCCGGG 1 cut(s) 436
TspRI CASTG 5 cut(s) 163, 232, 963, 2398, 2691
VpaK11BI GGWCC 2 cut(s) 55, 1622
VspI ATTAAT 1 cut(s) 3234
XapI RAATTY 2 cut(s) 325, 2308
XbaI TCTAGA 1 cut(s) 2537
XceI RCATGY 6 cut(s) 928, 932, 1109, 1231, 1239, 2240
XcmI CCANNNNNNNNNTGG 2 cut(s) 362, 1183
XhoI CTCGAG 1 cut(s) 2084
XmaI CCCGGG 1 cut(s) 436
XmiI GTMKAC 2 cut(s) 698, 863
XspI CTAG 8 cut(s) 20, 1011, 1086, 1272, 2153, 2538, 2565, 2789
ZraI GACGTC 1 cut(s) 894
ZrmI AGTACT 3 cut(s) 964, 2157, 3176
Zsp2I ATGCAT 2 cut(s) 930, 934
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.