Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0001624

Physical Location & Seq

Genomic Coordinates Forward (+)

15767079 .. 15775013

Gene Structure 7935 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g18960.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3351 bp

ATGAGCTTCTTGAAGCTCAAAGCTTCAAGCTTTATCTCATTGGTTTTACTGGGTTTCTTAGCTTTGAGCTTGGTTCACTTTGTTCACAGCCAAGATGTGGATGACTATGATGGAATTGACAACCCTGCAGTTCTTCCATTGATCACTCAGATTGTGTATGGAAGAATCTCAAATGTTACAGCAGTTCTCAGTGGGGAGATTAGCAATCGTTCAAGCTTCTGTGTGAAAGACCCGGAAGCTGATTGGAACCAGGCATTTAATTTTTCAAACAATTTGGATTTCTTAACTTCATGCATTCAAAAGACTAAAGGAGATATTACGCGGCGATTGTGTACAGCAGCAGAGATGAAATTCTATTTCAACAATTTCTTTGTAAAGGCTGAGAGTGCAAATTACTTGAGACCCAACCAGAACTGTAATTTAACCTCTTGGGTTTCTGGATGTGAGCCAGGATGGGCATGTAGTGTGGGCCAAGATCAGCAGGTTGACCTCAAAAATGCACAGGACATGCCTCCCAGAACTCAGAACTGCCAGCCTTGTTGTGAGGGTTTCTTTTGTCCACATGGTCTCACCTGCATGATACCTTGCCCTTCGGGTTCTTACTGTCCCATGGCAACCCTGAACAGAGCAACCGGTATTTGTGAACCATACATTTACCAGCTACCCCCTGGGCAACCAAACCATACTTGTGGAGGAGCAAATATATGGGCTGATGTTGTTAGTAGTGGAGAATTATTCTGTTCAGCTGGATCATATTGTCCAACCACAGTGAAAAGAATTCCCTGCAGTAGTGGACATTACTGCCGGAAGGGTTCTACAGATGAGAAACGTTGTTTCAAGTTGACTTCCTGTGATGCAAACACTGCAAATCAAAATATTCATGCATATGGGATCATGCTTATTGCAGCTTTGATCACTCTGCTGCTCATTATTTACAATTGTTCTGACCAAGTACTCATCACTAGGGGGAGAAGACTAGCCAAATCTCGGGAGAAAGCAGCCAAAAGTGCAAGGGAAATGGCAAAAGCACGCCAAAGATGGAAAGGTGCAAAAGATGCTGCTAAGAAGCATGCAAGTGGGTTACAAGCTCATTTATCACGCACATTTTCTCGGAAAAAGGACACTCAAGATCCTGAGAAACTTAAGATTTTAAATGAGCCAAAACCAGACATGGATGATGATCTGCCTACTCCTCCACATCAAAGTAGATCAAATGTATCACCATCTACATCTGTGCCACCAAAGGCAAAGAAAAAGGAACCTAGTGAGCTCATGCAGATTATGCGTAAAATTGAAGATGACCCGGAGAATTTTAAAGGTTTCAGCATTGGAGGTGAAGACACAAATGTAGGAAATGTGCCAAAAGGAAAGCAGATACATACTCATACACAAATCTTCAATTATGCTTATGCTCAGATTGAGAAAGAGAAGGCTCAGCAGCAAGATTACAAGGACCTTACCTTCTCTGGGGTGGTTAAAATGGCTACTAACAACGAAGTACGGAAAAGGCCTCTAATTGAGATTTCTTTCAAGGACCTTACACTTACTTTGAAATCGAAAAACAAGCATTTGTTGAGGTGTGTAACTGGTAAAATAAAGCCTGGCCGCATCACTGCAGTCATGGGTCCGTCAGGAGCTGGAAAAACTACTTTTCTTTCTGCCCTGGCTGGAAAAGCGATTGGATGCAATATGACTGGTTTAATTCTTGTAAATGGGAGGAATGTCTCAATCCATTCATATAAGAAAATCATAGGTTTTGTGCCACAAGATGATATTGTGCATGGAAACTTGACTGTGGAAGAGAATCTGTGGTTCAGTGCAAAGTGCAGGTTATCAGCGGACTTATCAAAACCAGATAAAGTTCTGGTGGTTGAAAGAGCTATTGAGTCCCTAGGGCTCCAGACAGTACGTGATTCCTTGGTTGGAACTGTAGAGAAACGAGGGATCTCTGGAGGCCAGAGGAAACGTGTAAATGTTGGTTTGGAAATGGTTATGGAACCTTCACTTTTGATTTTGGATGAACCTACATCTGGTCTGGACAGTGCGTCTTCTCAGCTACTTCTTAGAGCACTTCGACGGGAAGCTCTTGAAGGAGTAAACATCTGCATGGTGGTTCACCAACCTAGCTATGCCTTGTTCAAGATGTTTGATGAGTTAGTACTCCTGGCAAAAGGTGGTTTAACTGTCTATCATGGATCGGCAAAGCAAGTAGAAGAATACTTTTCAAGCATTGGGATCAATGTCCCAGACCGCATTAACCCTCCAGACCACTACATTGATATTTTGGAGGGTATGGTGACAACAGAAAGGAGTTCAGGAGTGATTTATAAAGATCTTCCCCTCAGATGGATGCTTTATAATGGGTACTCGGTACCCCCTGATATGAGGCCGAGTGCTGCTCAACTTTCATTGCCCTCAATGGATGAAAATTTAGTTCATGAAACAAATCCTGCTGATGCTCAGATAGAGGAACAATCTTTTGCTGGAGAGTTATGGCAAGATGTAAAAACTAATGTGGATCTGCATCGTGATAAGATACGTCTTAATTTCTTGAAATCTAAGGATATGTCTAACCGGAGAACTCCAGGTGTATTTCAGCAATACAGATACTTCCTCGGAAGACTTGGTAAGCAGAGACTTAGAGAAGCTCGGATACAAGCAGTTGATTATCTGATTTTATTACTTGCTGGAGCCTGCTTAGGATCACTTGCAAAAGCGAGCGATCAGGACTTCGGTGCACTTGGTTACACATACACCATCATTGCAGTTTCTCTACTGTGTAAGATTGCGGCTTTGAGATCCTTTTCTCTAGATAGATTACAGCATTGGAGAGAGAGCGCATCTGGGATGAGCAGCTTGGCTTATTTTCTTGCTAAGGATACTGTCGACCATTTTAATACAGTGATCAAACCTTTCGTGTATCTTTCCATGTTCTACTTCTTCACCAACCCAAGATCTAGCTTTGCAGATAATTATGTTGTTCTGCTTTGCCTTGTGTATTGTGTAACTGGCATAGCGTATGCATTAGCAATATTTTTCGAACAAGGTGCAGCCCAGCTATCATCGGTTCTCCTTCCAGTTGTTTTGACACTCATAGCAACACGACCACATGATGGTCAGATGCTCAAGGCTTTAGCAAATGTATGCTACCCTAAGTGGGCTTTGGAAGCATTTGTGATTGCAAATGTTGAAAGGTATTCTGGAGTATGGCTAATAACTAGGTGCGGAGCACTTTTGAAAAATGGCTACAATCTGAATGACTGGAGTCTTTGTATAATAGTTCTCGTCTTCACAGGGTTCGTTAGCCGTGTGATAGCTTTCCTCTGCATGGTGACATTTCAGAAGAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0008150 GO:0015399 GO:0015405 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0031224 GO:0042623 GO:0042626 GO:0043492 GO:0044425 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC_tran

Protein Analysis

1117

Amino Acids

123.95

Weight (kDa)

8.87

Isoelectric Point (pI)

37.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	528 - 677	1.1e-24	ABC transporter
ABC2_membrane_7	PF19055	706 - 1116	6e-224	ABC-2 type transporter
ABC2_membrane	PF01061	867 - 1060	5.2e-08	ABC-2 type transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001624)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53390
fragaria_vesca	FvH4_6g32451 FvH4_7g18960 FvH4_7g18960
malus_domestica	MD00G1214200.v1.1
prunus_persica	Prupe.2G210600_v2.0.a1 Prupe.2G210600_v2.0.a1 Prupe.2G210600_v2.0.a1
pyrus_communis	pycom01g13180 pycom01g13190 pycom07g16600
rosa_chinensis	RchiOBHm_Chr1g0360271 RchiOBHm_Chr1g0362891 RchiOBHm_Chr2g0140691 RchiOBHm_Chr2g0140701
rosa_laevigata	RLG00000003015 RLG00000019892 RLG00000019893 RLG00000027614
rosa_multiflora	Rmu_co8315067.1_g000001 Rmu_sc0001502.1_g000011 Rmu_sc0003342.1_g000012 Rmu_sc0003342.1_g000013
rosa_roxburghii	Rroxscaffold_1G00043370 Rroxscaffold_2G00104570 Rroxscaffold_2G00104580 Rroxscaffold_3G00227580 Rroxscaffold_4G00293670 Rroxscaffold_5G00347780 Rroxscaffold_5G00347800
rosa_rugosa	Rorug01G0302100 Rorug02G0364100 Rorug02G0364100 Rorug03G0261700
rosa_samantha	Rh1AG185000 Rh1AG311300 Rh1BG274400 Rh1DG305200 Rh2AG327100 Rh2AG415900 Rh2BG425300 Rh2BG425400 Rh2DG435400 Rh4AG110400 Rh6DG223100 Rh7BG077900
rosa_wichuraiana	Rw1G027590 Rw2G034020 Rw2G034030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	2328, 2358
AarI	CACCTGC	1 cut(s)	581
Acc36I	ACCTGC	3 cut(s)	472, 581, 1818
Acc65I	GGTACC	1 cut(s)	2371
AccB1I	GGYRCC	1 cut(s)	2371
AccB7I	CCANNNNNTGG	2 cut(s)	97, 3113
AccI	GTMKAC	1 cut(s)	2886
AccII	CGCG	1 cut(s)	322
AciI	CCGC	6 cut(s)	322, 1606, 1838, 2251, 2789, 3225
AclI	AACGTT	1 cut(s)	829
AclWI	GGATC	9 cut(s)	757, 899, 1124, 1952, 2203, 2243, 2526, 2710, 2793
AcoI	YGGCCR	1 cut(s)	1603
AcsI	RAATTY	4 cut(s)	350, 777, 1309, 2428
AfaI	GTAC	7 cut(s)	334, 954, 1500, 1908, 2160, 2366, 2373
AfiI	CCNNNNNNNGG	8 cut(s)	97, 987, 1467, 2030, 2346, 3113, 3157, 3328
AflII	CTTAAG	1 cut(s)	1142
AflIII	ACRYGT	1 cut(s)	1966
AgeI	ACCGGT	1 cut(s)	632
AhdI	GACNNNNNGTC	1 cut(s)	2044
AjnI	CCWGG	7 cut(s)	249, 448, 667, 1600, 1662, 2163, 2584
Alw21I	GWGCWC	4 cut(s)	1272, 2071, 2740, 3232
Alw26I	GTCTC	4 cut(s)	394, 572, 1729, 2629
Alw44I	GTGCAC	1 cut(s)	2736
AlwI	GGATC	9 cut(s)	757, 899, 1124, 1952, 2203, 2243, 2526, 2710, 2793
AlwNI	CAGNNNCTG	1 cut(s)	1637
Ama87I	CYCGRG	1 cut(s)	987
AoxI	GGCC	5 cut(s)	469, 1508, 1603, 1954, 2387
ApaLI	GTGCAC	1 cut(s)	2736
ApeKI	GCWGC	9 cut(s)	338, 905, 922, 998, 1058, 1438, 2396, 2853, 3050
ApoI	RAATTY	4 cut(s)	350, 777, 1309, 2428
AsiGI	ACCGGT	1 cut(s)	632
Asp718I	GGTACC	1 cut(s)	2371
AspA2I	CCTAGG	1 cut(s)	1891
AspLEI	GCGC	1 cut(s)	2840
AspS9I	GGNCC	4 cut(s)	469, 1453, 1534, 1625
AsuC2I	CCSGG	2 cut(s)	233, 1304
AsuHPI	GGTGA	7 cut(s)	562, 1212, 1346, 2108, 2308, 2935, 3343
AsuII	TTCGAA	1 cut(s)	3039
AvaI	CYCGRG	1 cut(s)	987
AvaII	GGWCC	3 cut(s)	1453, 1534, 1625
AvrII	CCTAGG	1 cut(s)	1891
BaeGI	GKGCMC	1 cut(s)	2740
BanI	GGYRCC	1 cut(s)	2371
BanII	GRGCYC	2 cut(s)	1272, 1899
BarI	GAAGNNNNNNTAC	2 cut(s)	2637, 2669
BbsI	GAAGAC	5 cut(s)	979, 1344, 2040, 2626, 3280
Bbv12I	GWGCWC	4 cut(s)	1272, 2071, 2740, 3232
BbvI	GCAGC	9 cut(s)	350, 909, 917, 1010, 1045, 1450, 2383, 2865, 3062
BccI	CCATC	7 cut(s)	104, 447, 1032, 1231, 2340, 2765, 3107
BceAI	ACGGC	1 cut(s)	3291
BcgI	CGANNNNNNTGC	2 cut(s)	3029, 3063
BciT130I	CCWGG	7 cut(s)	251, 450, 669, 1602, 1664, 2165, 2586
BciVI	GTATCC	2 cut(s)	2646, 2872
BclI	TGATCA	3 cut(s)	141, 912, 2904
BcnI	CCSGG	2 cut(s)	233, 1304
BcoDI	GTCTC	4 cut(s)	394, 572, 1729, 2629
BfaI	CTAG	8 cut(s)	963, 977, 1263, 1892, 2124, 2810, 2958, 3219
BfmI	CTRYAG	5 cut(s)	126, 784, 816, 1614, 1929
BfrI	CTTAAG	1 cut(s)	1142
BfuAI	ACCTGC	3 cut(s)	472, 581, 1818
BfuI	GTATCC	2 cut(s)	2646, 2872
BglII	AGATCT	2 cut(s)	2332, 2954
BlnI	CCTAGG	1 cut(s)	1891
BlpI	GCTNAGC	1 cut(s)	1434
BmcAI	AGTACT	2 cut(s)	954, 2160
Bme1390I	CCNGG	9 cut(s)	233, 251, 450, 669, 1304, 1602, 1664, 2165, 2586
Bme18I	GGWCC	3 cut(s)	1453, 1534, 1625
BmeRI	GACNNNNNGTC	1 cut(s)	2044
BmeT110I	CYCGRG	1 cut(s)	987
BmgT120I	GGNCC	4 cut(s)	469, 1453, 1534, 1625
BmiI	GGNNCC	7 cut(s)	248, 1260, 1626, 1898, 1998, 2373, 2692
BmrFI	CCNGG	9 cut(s)	233, 251, 450, 669, 1304, 1602, 1664, 2165, 2586
BmrI	ACTGGG	1 cut(s)	59
BmsI	GCATC	9 cut(s)	844, 1045, 1617, 1673, 2340, 2446, 2533, 2849, 3111
BmuI	ACTGGG	1 cut(s)	59
BoxI	GACNNNNGTC	1 cut(s)	3264
BpiI	GAAGAC	5 cut(s)	979, 1344, 2040, 2626, 3280
BplI	GAGNNNNNCTC	2 cut(s)	2383, 2415
BpmI	CTGGAG	8 cut(s)	1883, 1971, 2247, 2505, 2568, 2709, 3222, 3283
Bpu10I	CCTNAGC	2 cut(s)	2698, 2874
Bpu1102I	GCTNAGC	1 cut(s)	1434
Bpu14I	TTCGAA	1 cut(s)	3039
BpuEI	CTTGAG	3 cut(s)	418, 1110, 3110
BpuMI	CCSGG	2 cut(s)	233, 1304
BsaAI	YACGTR	1 cut(s)	1910
BsaBI	GATNNNNATC	2 cut(s)	1179, 2523
BsaI	GGTCTC	2 cut(s)	394, 572
BsaJI	CCNNGG	7 cut(s)	609, 667, 668, 1662, 1891, 1917, 2614
BsaWI	WCCGGW	2 cut(s)	632, 2574
BsaXI	ACNNNNNCTCC	2 cut(s)	3256, 3286
Bsc4I	CCNNNNNNNGG	8 cut(s)	97, 987, 1467, 2030, 2346, 3113, 3157, 3328
Bse118I	RCCGGY	1 cut(s)	632
Bse1I	ACTGG	6 cut(s)	54, 1591, 1699, 3013, 3077, 3266
Bse3DI	GCAATG	2 cut(s)	2408, 2760
Bse8I	GATNNNNATC	2 cut(s)	1179, 2523
BseBI	CCWGG	7 cut(s)	251, 450, 669, 1602, 1664, 2165, 2586
BseDI	CCNNGG	7 cut(s)	609, 667, 668, 1662, 1891, 1917, 2614
BseGI	GGATG	9 cut(s)	106, 446, 458, 1180, 1688, 2023, 2355, 2428, 2853
BseJI	GATNNNNATC	2 cut(s)	1179, 2523
BseLI	CCNNNNNNNGG	8 cut(s)	97, 987, 1467, 2030, 2346, 3113, 3157, 3328
BseMI	GCAATG	2 cut(s)	2408, 2760
BseNI	ACTGG	6 cut(s)	54, 1591, 1699, 3013, 3077, 3266
BseRI	GAGGAG	2 cut(s)	708, 1182
BseSI	GKGCMC	1 cut(s)	2740
BseXI	GCAGC	9 cut(s)	350, 909, 917, 1010, 1045, 1450, 2383, 2865, 3062
BseYI	CCCAGC	1 cut(s)	3054
BsgI	GTGCAG	2 cut(s)	1846, 3069
Bsh1236I	CGCG	1 cut(s)	322
BshFI	GGCC	5 cut(s)	471, 1510, 1605, 1956, 2389
BshNI	GGYRCC	1 cut(s)	2371
BshTI	ACCGGT	1 cut(s)	632
BsiHKAI	GWGCWC	4 cut(s)	1272, 2071, 2740, 3232
BsiHKCI	CYCGRG	1 cut(s)	987
BsiSI	CCGG	5 cut(s)	233, 633, 805, 1304, 2575
BslFI	GGGAC	3 cut(s)	591, 1873, 2228
BslI	CCNNNNNNNGG	8 cut(s)	97, 987, 1467, 2030, 2346, 3113, 3157, 3328
BsmAI	GTCTC	4 cut(s)	394, 572, 1729, 2629
BsmFI	GGGAC	3 cut(s)	591, 1873, 2228
BsmI	GAATGC	1 cut(s)	294
BsnI	GGCC	5 cut(s)	471, 1510, 1605, 1956, 2389
Bso31I	GGTCTC	2 cut(s)	394, 572
BsoBI	CYCGRG	1 cut(s)	987
Bsp119I	TTCGAA	1 cut(s)	3039
Bsp1286I	GDGCHC	5 cut(s)	1272, 1899, 2071, 2740, 3232
Bsp1407I	TGTACA	1 cut(s)	332
Bsp1720I	GCTNAGC	1 cut(s)	1434
Bsp19I	CCATGG	1 cut(s)	609
BspACI	CCGC	6 cut(s)	322, 1606, 1838, 2251, 2789, 3225
BspANI	GGCC	5 cut(s)	471, 1510, 1605, 1956, 2389
BspFNI	CGCG	1 cut(s)	322
BspHI	TCATGA	1 cut(s)	2437
BspLI	GGNNCC	7 cut(s)	248, 1260, 1626, 1898, 1998, 2373, 2692
BspMAI	CTGCAG	3 cut(s)	130, 788, 1618
BspMI	ACCTGC	3 cut(s)	472, 581, 1818
BspPI	GGATC	9 cut(s)	757, 899, 1124, 1952, 2203, 2243, 2526, 2710, 2793
BspT104I	TTCGAA	1 cut(s)	3039
BspT107I	GGYRCC	1 cut(s)	2371
BspTI	CTTAAG	1 cut(s)	1142
BspTNI	GGTCTC	2 cut(s)	394, 572
BsrDI	GCAATG	2 cut(s)	2408, 2760
BsrFI	RCCGGY	1 cut(s)	632
BsrGI	TGTACA	1 cut(s)	332
BsrI	ACTGG	6 cut(s)	54, 1591, 1699, 3013, 3077, 3266
BssAI	RCCGGY	1 cut(s)	632
BssECI	CCNNGG	7 cut(s)	609, 667, 668, 1662, 1891, 1917, 2614
BssT1I	CCWWGG	3 cut(s)	609, 1891, 1917
Bst2UI	CCWGG	7 cut(s)	251, 450, 669, 1602, 1664, 2165, 2586
Bst6I	CTCTTC	1 cut(s)	1794
BstAFI	CTTAAG	1 cut(s)	1142
BstAPI	GCANNNNNTGC	3 cut(s)	863, 1055, 1282
BstAUI	TGTACA	1 cut(s)	332
BstBAI	YACGTR	1 cut(s)	1910
BstBI	TTCGAA	1 cut(s)	3039
BstC8I	GCNNGC	5 cut(s)	533, 1030, 1071, 2695, 2719
BstDSI	CCRYGG	1 cut(s)	609
BstF5I	GGATG	9 cut(s)	106, 446, 458, 1180, 1688, 2023, 2355, 2428, 2853
BstFNI	CGCG	1 cut(s)	322
BstHHI	GCGC	1 cut(s)	2840
BstMAI	GTCTC	4 cut(s)	394, 572, 1729, 2629
BstMWI	GCNNNNNNNGC	7 cut(s)	386, 863, 1007, 1055, 1282, 1673, 3167
BstNI	CCWGG	7 cut(s)	251, 450, 669, 1602, 1664, 2165, 2586
BstNSI	RCATGY	3 cut(s)	462, 511, 1073
BstPAI	GACNNNNGTC	1 cut(s)	3264
BstSCI	CCNGG	9 cut(s)	231, 249, 448, 667, 1302, 1600, 1662, 2163, 2584
BstSFI	CTRYAG	5 cut(s)	126, 784, 816, 1614, 1929
BstSLI	GKGCMC	1 cut(s)	2740
BstUI	CGCG	1 cut(s)	322
BstV1I	GCAGC	9 cut(s)	350, 909, 917, 1010, 1045, 1450, 2383, 2865, 3062
BstV2I	GAAGAC	5 cut(s)	979, 1344, 2040, 2626, 3280
BstX2I	RGATCY	6 cut(s)	1129, 1944, 2332, 2518, 2798, 2954
BstXI	CCANNNNNNTGG	1 cut(s)	689
BstYI	RGATCY	6 cut(s)	1129, 1944, 2332, 2518, 2798, 2954
BsuI	GTATCC	2 cut(s)	2646, 2872
BsuRI	GGCC	5 cut(s)	471, 1510, 1605, 1956, 2389
BtgI	CCRYGG	1 cut(s)	609
BtsCI	GGATG	9 cut(s)	106, 446, 458, 1180, 1688, 2023, 2355, 2428, 2853
BtsI	GCAGTG	2 cut(s)	861, 1611
BtsIMutI	CAGTG	7 cut(s)	196, 774, 861, 1611, 1822, 2047, 2907
BveI	ACCTGC	3 cut(s)	472, 581, 1818
Cac8I	GCNNGC	5 cut(s)	533, 1030, 1071, 2695, 2719
CaiI	CAGNNNCTG	1 cut(s)	1637
CciI	TCATGA	1 cut(s)	2437
CfoI	GCGC	1 cut(s)	2840
Cfr10I	RCCGGY	1 cut(s)	632
Cfr13I	GGNCC	4 cut(s)	469, 1453, 1534, 1625
CseI	GACGC	1 cut(s)	2034
Csp6I	GTAC	7 cut(s)	333, 953, 1499, 1907, 2159, 2365, 2372
CspAI	ACCGGT	1 cut(s)	632
CviQI	GTAC	7 cut(s)	333, 953, 1499, 1907, 2159, 2365, 2372
DraI	TTTAAA	2 cut(s)	1152, 1315
DriI	GACNNNNNGTC	1 cut(s)	2044
EaeI	YGGCCR	1 cut(s)	1603
Eam1104I	CTCTTC	1 cut(s)	1794
Eam1105I	GACNNNNNGTC	1 cut(s)	2044
EarI	CTCTTC	1 cut(s)	1794
Ecl136II	GAGCTC	1 cut(s)	1270
Eco130I	CCWWGG	3 cut(s)	609, 1891, 1917
Eco147I	AGGCCT	1 cut(s)	1510
Eco24I	GRGCYC	2 cut(s)	1272, 1899
Eco31I	GGTCTC	2 cut(s)	394, 572
Eco47I	GGWCC	3 cut(s)	1453, 1534, 1625
Eco53kI	GAGCTC	1 cut(s)	1270
Eco88I	CYCGRG	1 cut(s)	987
EcoICRI	GAGCTC	1 cut(s)	1270
EcoO109I	RGGNCCY	2 cut(s)	1453, 1534
EcoRI	GAATTC	1 cut(s)	777
EcoRII	CCWGG	7 cut(s)	249, 448, 667, 1600, 1662, 2163, 2584
EcoT14I	CCWWGG	3 cut(s)	609, 1891, 1917
EcoT22I	ATGCAT	3 cut(s)	296, 886, 3025
EcoT38I	GRGCYC	2 cut(s)	1272, 1899
ErhI	CCWWGG	3 cut(s)	609, 1891, 1917
FaqI	GGGAC	3 cut(s)	591, 1873, 2228
FauNDI	CATATG	1 cut(s)	886
FbaI	TGATCA	3 cut(s)	141, 912, 2904
FblI	GTMKAC	1 cut(s)	2886
FokI	GGATG	9 cut(s)	113, 453, 465, 1187, 1695, 2030, 2362, 2435, 2860
FriOI	GRGCYC	2 cut(s)	1272, 1899
FspBI	CTAG	8 cut(s)	963, 977, 1263, 1892, 2124, 2810, 2958, 3219
GlaI	GCGC	1 cut(s)	2839
GsaI	CCCAGC	1 cut(s)	3058
GsuI	CTGGAG	8 cut(s)	1883, 1971, 2247, 2505, 2568, 2709, 3222, 3283
HaeIII	GGCC	5 cut(s)	471, 1510, 1605, 1956, 2389
HapII	CCGG	5 cut(s)	233, 633, 805, 1304, 2575
HgaI	GACGC	1 cut(s)	2034
HhaI	GCGC	1 cut(s)	2840
Hin6I	GCGC	1 cut(s)	2838
HinP1I	GCGC	1 cut(s)	2838
HincII	GTYRAC	3 cut(s)	487, 843, 2887
HindII	GTYRAC	3 cut(s)	487, 843, 2887
HindIII	AAGCTT	3 cut(s)	21, 28, 214
HinfI	GANTC	5 cut(s)	165, 1804, 1886, 1913, 3265
HpaII	CCGG	5 cut(s)	233, 633, 805, 1304, 2575
HphI	GGTGA	7 cut(s)	562, 1212, 1346, 2108, 2308, 2935, 3343
Hpy99I	CGWCG	1 cut(s)	2079
HpyAV	CCTTC	7 cut(s)	600, 802, 1423, 1471, 2010, 2084, 3083
HpyCH4IV	ACGT	4 cut(s)	829, 1909, 1966, 2539
HpyF10VI	GCNNNNNNNGC	7 cut(s)	386, 863, 1007, 1055, 1282, 1673, 3167
HpySE526I	ACGT	4 cut(s)	829, 1909, 1966, 2539
HspAI	GCGC	1 cut(s)	2838
KpnI	GGTACC	1 cut(s)	2375
Ksp22I	TGATCA	3 cut(s)	141, 912, 2904
LmnI	GCTCC	5 cut(s)	695, 1634, 1902, 2690, 3227
Lsp1109I	GCAGC	9 cut(s)	350, 909, 917, 1010, 1045, 1450, 2383, 2865, 3062
LweI	GCATC	9 cut(s)	844, 1045, 1617, 1673, 2340, 2446, 2533, 2849, 3111
MaeI	CTAG	8 cut(s)	963, 977, 1263, 1892, 2124, 2810, 2958, 3219
MaeII	ACGT	4 cut(s)	829, 1909, 1966, 2539
MaeIII	GTNAC	7 cut(s)	175, 1080, 1582, 2296, 2744, 3004, 3331
MfeI	CAATTG	1 cut(s)	937
MflI	RGATCY	6 cut(s)	1129, 1944, 2332, 2518, 2798, 2954
MhlI	GDGCHC	5 cut(s)	1272, 1899, 2071, 2740, 3232
MlyI	GAGTC	2 cut(s)	1895, 3274
MmeI	TCCRAC	2 cut(s)	785, 1903
Mph1103I	ATGCAT	3 cut(s)	296, 886, 3025
MslI	CAYNNNNRTG	5 cut(s)	575, 687, 885, 1074, 2105
MspA1I	CMGCKG	2 cut(s)	746, 1838
MspCI	CTTAAG	1 cut(s)	1142
MspI	CCGG	5 cut(s)	233, 633, 805, 1304, 2575
MspR9I	CCNGG	9 cut(s)	233, 251, 450, 669, 1304, 1602, 1664, 2165, 2586
MunI	CAATTG	1 cut(s)	937
Mva1269I	GAATGC	1 cut(s)	294
MvaI	CCWGG	7 cut(s)	251, 450, 669, 1602, 1664, 2165, 2586
MvnI	CGCG	1 cut(s)	322
MwoI	GCNNNNNNNGC	7 cut(s)	386, 863, 1007, 1055, 1282, 1673, 3167
NciI	CCSGG	2 cut(s)	233, 1304
NcoI	CCATGG	1 cut(s)	609
NdeI	CATATG	1 cut(s)	886
NlaIV	GGNNCC	7 cut(s)	248, 1260, 1626, 1898, 1998, 2373, 2692
NmeAIII	GCCGAG	1 cut(s)	2415
NmuCI	GTSAC	2 cut(s)	2296, 3331
NsiI	ATGCAT	3 cut(s)	296, 886, 3025
NspI	RCATGY	3 cut(s)	462, 511, 1073
NspV	TTCGAA	1 cut(s)	3039
PaeI	GCATGC	1 cut(s)	1073
PagI	TCATGA	1 cut(s)	2437
PaqCI	CACCTGC	1 cut(s)	581
PasI	CCCWGGG	1 cut(s)	668
PceI	AGGCCT	1 cut(s)	1510
PctI	GAATGC	1 cut(s)	294
PfeI	GAWTC	3 cut(s)	165, 1804, 1913
PflMI	CCANNNNNTGG	2 cut(s)	97, 3113
PinAI	ACCGGT	1 cut(s)	632
PleI	GAGTC	2 cut(s)	1894, 3273
PpsI	GAGTC	2 cut(s)	1894, 3273
Ppu21I	YACGTR	1 cut(s)	1910
PpuMI	RGGWCCY	2 cut(s)	1453, 1534
PshAI	GACNNNNGTC	1 cut(s)	3264
PsiI	TTATAA	2 cut(s)	2328, 2358
Psp124BI	GAGCTC	1 cut(s)	1272
Psp1406I	AACGTT	1 cut(s)	829
Psp5II	RGGWCCY	2 cut(s)	1453, 1534
Psp6I	CCWGG	7 cut(s)	249, 448, 667, 1600, 1662, 2163, 2584
PspFI	CCCAGC	1 cut(s)	3054
PspGI	CCWGG	7 cut(s)	249, 448, 667, 1600, 1662, 2163, 2584
PspN4I	GGNNCC	7 cut(s)	248, 1260, 1626, 1898, 1998, 2373, 2692
PspPI	GGNCC	4 cut(s)	469, 1453, 1534, 1625
PspPPI	RGGWCCY	2 cut(s)	1453, 1534
PstI	CTGCAG	3 cut(s)	130, 788, 1618
PstNI	CAGNNNCTG	1 cut(s)	1637
PsuI	RGATCY	6 cut(s)	1129, 1944, 2332, 2518, 2798, 2954
PvuII	CAGCTG	1 cut(s)	746
RsaI	GTAC	7 cut(s)	334, 954, 1500, 1908, 2160, 2366, 2373
RsaNI	GTAC	7 cut(s)	333, 953, 1499, 1907, 2159, 2365, 2372
RseI	CAYNNNNRTG	5 cut(s)	575, 687, 885, 1074, 2105
SacI	GAGCTC	1 cut(s)	1272
SalI	GTCGAC	1 cut(s)	2885
Sau96I	GGNCC	4 cut(s)	469, 1453, 1534, 1625
ScaI	AGTACT	2 cut(s)	954, 2160
SchI	GAGTC	2 cut(s)	1895, 3274
ScrFI	CCNGG	9 cut(s)	233, 251, 450, 669, 1304, 1602, 1664, 2165, 2586
SduI	GDGCHC	5 cut(s)	1272, 1899, 2071, 2740, 3232
SfaNI	GCATC	9 cut(s)	844, 1045, 1617, 1673, 2340, 2446, 2533, 2849, 3111
SfcI	CTRYAG	5 cut(s)	126, 784, 816, 1614, 1929
SfuI	TTCGAA	1 cut(s)	3039
SinI	GGWCC	3 cut(s)	1453, 1534, 1625
SmiMI	CAYNNNNRTG	5 cut(s)	575, 687, 885, 1074, 2105
SmlI	CTYRAG	4 cut(s)	397, 1125, 1142, 3125
SmoI	CTYRAG	4 cut(s)	397, 1125, 1142, 3125
SphI	GCATGC	1 cut(s)	1073
SseBI	AGGCCT	1 cut(s)	1510
SsiI	CCGC	6 cut(s)	322, 1606, 1838, 2251, 2789, 3225
SspI	AATATT	2 cut(s)	877, 3033
SspMI	CTAG	8 cut(s)	963, 977, 1263, 1892, 2124, 2810, 2958, 3219
SstI	GAGCTC	1 cut(s)	1272
StuI	AGGCCT	1 cut(s)	1510
StyD4I	CCNGG	9 cut(s)	231, 249, 448, 667, 1302, 1600, 1662, 2163, 2584
StyI	CCWWGG	3 cut(s)	609, 1891, 1917
TaiI	ACGT	4 cut(s)	832, 1912, 1969, 2542
TaqI	TCGA	4 cut(s)	1556, 2074, 2886, 3039
TatI	WGTACW	3 cut(s)	332, 952, 2158
TauI	GCSGC	3 cut(s)	325, 1608, 2792
TfiI	GAWTC	3 cut(s)	165, 1804, 1913
TscAI	CASTG	7 cut(s)	196, 774, 868, 1618, 1822, 2047, 2907
TseFI	GTSAC	2 cut(s)	2296, 3331
TseI	GCWGC	9 cut(s)	338, 905, 922, 998, 1058, 1438, 2396, 2853, 3050
Tsp45I	GTSAC	2 cut(s)	2296, 3331
TspDTI	ATGAA	9 cut(s)	279, 362, 869, 1725, 2034, 2397, 2426, 2439, 2454
TspGWI	ACGGA	2 cut(s)	1516, 1617
TspRI	CASTG	7 cut(s)	196, 774, 868, 1618, 1822, 2047, 2907
Van91I	CCANNNNNTGG	2 cut(s)	97, 3113
Vha464I	CTTAAG	1 cut(s)	1142
VneI	GTGCAC	1 cut(s)	2736
VpaK11BI	GGWCC	3 cut(s)	1453, 1534, 1625
XapI	RAATTY	4 cut(s)	350, 777, 1309, 2428
XbaI	TCTAGA	1 cut(s)	2809
XceI	RCATGY	3 cut(s)	462, 511, 1073
XcmI	CCANNNNNNNNNTGG	1 cut(s)	665
XmaJI	CCTAGG	1 cut(s)	1891
XmiI	GTMKAC	1 cut(s)	2886
XspI	CTAG	8 cut(s)	963, 977, 1263, 1892, 2124, 2810, 2958, 3219
ZrmI	AGTACT	2 cut(s)	954, 2160
Zsp2I	ATGCAT	3 cut(s)	296, 886, 3025

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.