Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003342.1

Orthogroup ID

OG0001624

Physical Location & Seq

Genomic Coordinates Reverse (-)

60046 .. 66792

Gene Structure 6747 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003342.1_g000013.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2511 bp

atggtgtcagcagcctgtgtcatcaaccctacacaaaggccgcctcattcactgctctcaaagcctcctgcacatttgtctcacttactggctattttggctttgatcttggcacattggcttcactttgtgcagggacaagacttatatgacttcgaccaaattgacaaccctactgttcttccactcatcacacagattgtgtatggccgcatctccaatgccacagcaattctcagtcgggatcttagcaaccattccagcttctgtgttaaagacccgaacaggacactggccaaatcccgggaggcggcagcaaaatatgcaagtaaaatagcaatgtcacgccaaagatggaagtctgctacagacgctgctaagaattttgcaagtggattaccagctcatttatcacccaagttttctcgaaaaaaggacatcccaggtgcacctctgcatccaagtgcattctctgccactttgttctcatctatgccatctaaaggaaagcaagaggagtctagtgagctcatccagatgagcgacactgaagacaatccagagagtttcgaaggttttatatttggacctgaggatacaattgtaggaaatgtgtcaagaggaaaattaacacgtactcatgaccagatattcaagtatgcttatactcaacttgagaaagagaaggctctgcagcaagactacaaggaccttaccttacctggggtggttaaaatggccaataatattcagacaaggaaaaggcctctgatggagatttattttaaagaccttgcacttactttgaaagctcaaaataaacatatactgagatgtgtaactggtaaaataaagcctggctgcattactgcagtcatgggtccgtcaggtgctggaaaaacaacatttatttctgctctagctggaaaagcaattggatgcaaggtgactggtctaattcttataaatggaaagaatgaatcaatccattcgtataaaagaatcctaggttttgtgccgcaagatgatattgtgcacggaaacttgacagtggaagagaatttgtggttcagtgcaaagtgcagattgtcagcggacttatcaaaagcagatgaattcctagtgactgaaagagttatcgagtccttgggccttcagacagtacgcaattccttggttggaactctagagaagcgaggaatttctggaggacagaggaaacgtgtgaatgttggcgtggaaatggttatggaaccttcacttttgattttggatgaacccacatcagggttagacagtgcctcttctcagctacttcttagagcacttagatgggaagctcttgaaggggtaaacatttgcatggtggttcaccaacctagttatgcattattcaagatgtttgatgatctggtactcctggcaaaaggaggccttactgtctatcatggatcagcggagaaagttgaagaatactttgcaggccttgggatcaatgtcccagaccggatcaatcctccggactactttattgacattttggagggaatagtaacaacagaacgcagctcaagtgtaaactatagagagcttcctataagatggatgcttcataaggggtactcagtacctcctgatatgttgcatggtactgctggacttgcattgtcctcaaccggtggaaattcaattgatgaaacaaatattgctgctgctgaaatggaggaaccatcttcttcagcaagtctatggaaatacataaaaactaatatggaattgcattgtgattcaatatggctcaatttcttgaaatccaatgatttatcaaaccgtagaactccaggagtacttcagcaatacagatacttcctctgcaggtacatttatcaatgttttcatgtgcttgtcatcacattctggttttcaaataattctctactgtgcaaaattgcggctttgagatcgttttctctggacagattacactattggagagaagctgcatctggaatgagcagcttggcttattttctcgctaaggatacagttgatcattttaatacagtgatcaaacctttggtgtatctgtccatgttctactttttcaccgacccaagatctagcttagcagataattacattgttctactctgccttgtgtactgcgtaactggtatagcctatgcattagcaatcttctttgaccaaggtgcagcccaactgttatcagtccttcttcctgttgttttgactcttacagcaacacagcctcaggatagtgaaattctaaagattttggccaatttatgctatcctaagtgggctttggaggcatttgtgattgcaaatgctgaaagctactcaggggtatggctaataactcgttgcgggacgcttttgaaaagtggctatgatcttcatgattggaatctttgtataactgtcttgatcatcactggtttagttagtcgtgtgatcgcattctgttgtatgctgatctttcagaaatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0008150 GO:0015399 GO:0015405 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0031224 GO:0042623 GO:0042626 GO:0043492 GO:0044425 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC_tran

Protein Analysis

836

Amino Acids

92.92

Weight (kDa)

8.37

Isoelectric Point (pI)

40.96

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001624)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53390
fragaria_vesca	FvH4_6g32451 FvH4_7g18960 FvH4_7g18960
malus_domestica	MD00G1214200.v1.1
prunus_persica	Prupe.2G210600_v2.0.a1 Prupe.2G210600_v2.0.a1 Prupe.2G210600_v2.0.a1
pyrus_communis	pycom01g13180 pycom01g13190 pycom07g16600
rosa_chinensis	RchiOBHm_Chr1g0360271 RchiOBHm_Chr1g0362891 RchiOBHm_Chr2g0140691 RchiOBHm_Chr2g0140701
rosa_laevigata	RLG00000003015 RLG00000019892 RLG00000019893 RLG00000027614
rosa_multiflora	Rmu_co8315067.1_g000001 Rmu_sc0001502.1_g000011 Rmu_sc0003342.1_g000012 Rmu_sc0003342.1_g000013
rosa_roxburghii	Rroxscaffold_1G00043370 Rroxscaffold_2G00104570 Rroxscaffold_2G00104580 Rroxscaffold_3G00227580 Rroxscaffold_4G00293670 Rroxscaffold_5G00347780 Rroxscaffold_5G00347800
rosa_rugosa	Rorug01G0302100 Rorug02G0364100 Rorug02G0364100 Rorug03G0261700
rosa_samantha	Rh1AG185000 Rh1AG311300 Rh1BG274400 Rh1DG305200 Rh2AG327100 Rh2AG415900 Rh2BG425300 Rh2BG425400 Rh2DG435400 Rh4AG110400 Rh6DG223100 Rh7BG077900
rosa_wichuraiana	Rw1G027590 Rw2G034020 Rw2G034030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	965
Acc36I	ACCTGC	1 cut(s)	1866
AccIII	TCCGGA	1 cut(s)	1519
AciI	CCGC	8 cut(s)	41, 211, 311, 1019, 1094, 1457, 1952, 2388
AclWI	GGATC	4 cut(s)	252, 1459, 1499, 1517
AcoI	YGGCCR	4 cut(s)	208, 294, 738, 2298
AcsI	RAATTY	6 cut(s)	382, 1060, 1115, 1200, 1684, 2283
AcuI	CTGAAG	4 cut(s)	570, 1139, 1722, 1835
AdeI	CACNNNGTG	1 cut(s)	130
AfaI	GTAC	9 cut(s)	637, 1164, 1416, 1622, 1629, 1651, 1848, 1880, 2162
AfiI	CCNNNNNNNGG	6 cut(s)	303, 310, 503, 723, 1286, 1287
AflIII	ACRYGT	2 cut(s)	632, 1222
AgeI	ACCGGT	1 cut(s)	1676
AjnI	CCWGG	5 cut(s)	442, 721, 856, 1419, 1840
Alw21I	GWGCWC	4 cut(s)	451, 531, 1038, 1327
Alw26I	GTCTC	1 cut(s)	84
Alw44I	GTGCAC	2 cut(s)	447, 1034
AlwI	GGATC	4 cut(s)	252, 1459, 1499, 1517
AlwNI	CAGNNNCTG	3 cut(s)	267, 374, 893
Ama87I	CYCGRG	1 cut(s)	303
Aor13HI	TCCGGA	1 cut(s)	1519
AoxI	GGCC	9 cut(s)	38, 208, 294, 738, 764, 1150, 1432, 1483, 2298
ApaLI	GTGCAC	2 cut(s)	447, 1034
ApoI	RAATTY	6 cut(s)	382, 1060, 1115, 1200, 1684, 2283
AsiGI	ACCGGT	1 cut(s)	1676
AspA2I	CCTAGG	1 cut(s)	1006
AspS9I	GGNCC	4 cut(s)	587, 709, 881, 1150
AsuC2I	CCSGG	2 cut(s)	304, 305
AsuHPI	GGTGA	4 cut(s)	405, 958, 1364, 2098
AsuII	TTCGAA	1 cut(s)	570
AvaI	CYCGRG	1 cut(s)	303
AvaII	GGWCC	3 cut(s)	587, 709, 881
AvrII	CCTAGG	1 cut(s)	1006
AxyI	CCTNAGG	2 cut(s)	591, 2271
BaeGI	GKGCMC	2 cut(s)	451, 1038
BaeI	ACNNNNGTAYC	2 cut(s)	588, 621
BalI	TGGCCA	3 cut(s)	296, 740, 2300
BanII	GRGCYC	1 cut(s)	531
BbsI	GAAGAC	1 cut(s)	558
Bbv12I	GWGCWC	4 cut(s)	451, 531, 1038, 1327
BccI	CCATC	6 cut(s)	348, 505, 766, 1326, 1596, 1738
BciT130I	CCWGG	5 cut(s)	444, 723, 858, 1421, 1842
BciVI	GTATCC	2 cut(s)	589, 2035
BclI	TGATCA	3 cut(s)	2050, 2067, 2448
BcnI	CCSGG	2 cut(s)	304, 305
BcoDI	GTCTC	1 cut(s)	84
BfaI	CTAG	7 cut(s)	522, 920, 1007, 1121, 1187, 1380, 2121
BfmI	CTRYAG	5 cut(s)	366, 692, 870, 1582, 1873
BfuAI	ACCTGC	1 cut(s)	1866
BfuI	GTATCC	2 cut(s)	589, 2035
BglII	AGATCT	1 cut(s)	2117
BlnI	CCTAGG	1 cut(s)	1006
BlpI	GCTNAGC	1 cut(s)	2125
BmcAI	AGTACT	1 cut(s)	1848
Bme1390I	CCNGG	7 cut(s)	304, 305, 444, 723, 858, 1421, 1842
Bme18I	GGWCC	3 cut(s)	587, 709, 881
BmeT110I	CYCGRG	1 cut(s)	303
BmgT120I	GGNCC	4 cut(s)	587, 709, 881, 1150
BmiI	GGNNCC	3 cut(s)	882, 1254, 1728
BmrFI	CCNGG	7 cut(s)	304, 305, 444, 723, 858, 1421, 1842
BmsI	GCATC	5 cut(s)	222, 466, 929, 1596, 2012
BpiI	GAAGAC	1 cut(s)	558
BpmI	CTGGAG	2 cut(s)	1227, 1824
Bpu10I	CCTNAGC	1 cut(s)	2037
Bpu1102I	GCTNAGC	1 cut(s)	2125
Bpu14I	TTCGAA	1 cut(s)	570
BpuEI	CTTGAG	2 cut(s)	695, 1555
BpuMI	CCSGG	2 cut(s)	304, 305
BsaAI	YACGTR	1 cut(s)	635
BsaBI	GATNNNNATC	1 cut(s)	2427
BsaJI	CCNNGG	8 cut(s)	303, 442, 722, 1006, 1146, 1173, 1486, 2206
BsaWI	WCCGGW	3 cut(s)	1506, 1519, 1676
Bsc4I	CCNNNNNNNGG	6 cut(s)	303, 310, 503, 723, 1286, 1287
Bse118I	RCCGGY	1 cut(s)	1676
Bse1I	ACTGG	6 cut(s)	93, 297, 847, 955, 2176, 2461
Bse21I	CCTNAGG	2 cut(s)	591, 2271
Bse3DI	GCAATG	1 cut(s)	345
Bse8I	GATNNNNATC	1 cut(s)	2427
BseAI	TCCGGA	1 cut(s)	1519
BseBI	CCWGG	5 cut(s)	444, 723, 858, 1421, 1842
BseDI	CCNNGG	8 cut(s)	303, 442, 722, 1006, 1146, 1173, 1486, 2206
BseGI	GGATG	6 cut(s)	438, 457, 531, 944, 1279, 1611
BseJI	GATNNNNATC	1 cut(s)	2427
BseLI	CCNNNNNNNGG	6 cut(s)	303, 310, 503, 723, 1286, 1287
BseMI	GCAATG	1 cut(s)	345
BseMII	CTCAG	7 cut(s)	250, 582, 821, 1322, 1638, 2285, 2376
BseNI	ACTGG	6 cut(s)	93, 297, 847, 955, 2176, 2461
BseRI	GAGGAG	1 cut(s)	530
BseSI	GKGCMC	2 cut(s)	451, 1038
BsgI	GTGCAG	4 cut(s)	54, 152, 1102, 2232
BshFI	GGCC	9 cut(s)	40, 210, 296, 740, 766, 1152, 1434, 1485, 2300
BshTI	ACCGGT	1 cut(s)	1676
BsiHKAI	GWGCWC	4 cut(s)	451, 531, 1038, 1327
BsiHKCI	CYCGRG	1 cut(s)	303
BsiSI	CCGG	4 cut(s)	304, 1507, 1520, 1677
BslFI	GGGAC	3 cut(s)	150, 1484, 2404
BslI	CCNNNNNNNGG	6 cut(s)	303, 310, 503, 723, 1286, 1287
BsmAI	GTCTC	1 cut(s)	84
BsmFI	GGGAC	3 cut(s)	150, 1484, 2404
BsmI	GAATGC	2 cut(s)	467, 2480
BsnI	GGCC	9 cut(s)	40, 210, 296, 740, 766, 1152, 1434, 1485, 2300
BsoBI	CYCGRG	1 cut(s)	303
Bsp119I	TTCGAA	1 cut(s)	570
Bsp1286I	GDGCHC	4 cut(s)	451, 531, 1038, 1327
Bsp13I	TCCGGA	1 cut(s)	1519
Bsp1720I	GCTNAGC	1 cut(s)	2125
BspACI	CCGC	8 cut(s)	41, 211, 311, 1019, 1094, 1457, 1952, 2388
BspANI	GGCC	9 cut(s)	40, 210, 296, 740, 766, 1152, 1434, 1485, 2300
BspCNI	CTCAG	7 cut(s)	249, 583, 822, 1321, 1637, 2284, 2375
BspEI	TCCGGA	1 cut(s)	1519
BspHI	TCATGA	2 cut(s)	640, 2419
BspLI	GGNNCC	3 cut(s)	882, 1254, 1728
BspMAI	CTGCAG	3 cut(s)	696, 874, 1877
BspMI	ACCTGC	1 cut(s)	1866
BspPI	GGATC	4 cut(s)	252, 1459, 1499, 1517
BspT104I	TTCGAA	1 cut(s)	570
BsrDI	GCAATG	1 cut(s)	345
BsrFI	RCCGGY	1 cut(s)	1676
BsrI	ACTGG	6 cut(s)	93, 297, 847, 955, 2176, 2461
BssAI	RCCGGY	1 cut(s)	1676
BssECI	CCNNGG	8 cut(s)	303, 442, 722, 1006, 1146, 1173, 1486, 2206
BssT1I	CCWWGG	5 cut(s)	1006, 1146, 1173, 1486, 2206
Bst2UI	CCWGG	5 cut(s)	444, 723, 858, 1421, 1842
Bst6I	CTCTTC	2 cut(s)	1050, 1309
BstAPI	GCANNNNNTGC	2 cut(s)	323, 473
BstBAI	YACGTR	1 cut(s)	635
BstBI	TTCGAA	1 cut(s)	570
BstC8I	GCNNGC	1 cut(s)	1483
BstF5I	GGATG	6 cut(s)	438, 457, 531, 944, 1279, 1611
BstMAI	GTCTC	1 cut(s)	84
BstMWI	GCNNNNNNNGC	8 cut(s)	61, 98, 323, 371, 473, 929, 1661, 2330
BstNI	CCWGG	5 cut(s)	444, 723, 858, 1421, 1842
BstSCI	CCNGG	7 cut(s)	302, 303, 442, 721, 856, 1419, 1840
BstSFI	CTRYAG	5 cut(s)	366, 692, 870, 1582, 1873
BstSLI	GKGCMC	2 cut(s)	451, 1038
BstV2I	GAAGAC	1 cut(s)	558
BstX2I	RGATCY	2 cut(s)	244, 2117
BstYI	RGATCY	2 cut(s)	244, 2117
Bsu36I	CCTNAGG	2 cut(s)	591, 2271
BsuI	GTATCC	2 cut(s)	589, 2035
BsuRI	GGCC	9 cut(s)	40, 210, 296, 740, 766, 1152, 1434, 1485, 2300
BtsCI	GGATG	6 cut(s)	438, 457, 531, 944, 1279, 1611
BtsI	GCAGTG	1 cut(s)	50
BtsIMutI	CAGTG	8 cut(s)	50, 290, 546, 1056, 1078, 1303, 2070, 2454
BveI	ACCTGC	1 cut(s)	1866
Cac8I	GCNNGC	1 cut(s)	1483
CaiI	CAGNNNCTG	3 cut(s)	267, 374, 893
CciI	TCATGA	2 cut(s)	640, 2419
Cfr10I	RCCGGY	1 cut(s)	1676
Cfr13I	GGNCC	4 cut(s)	587, 709, 881, 1150
Cfr9I	CCCGGG	1 cut(s)	303
CseI	GACGC	2 cut(s)	380, 2401
Csp6I	GTAC	9 cut(s)	636, 1163, 1415, 1621, 1628, 1650, 1847, 1879, 2161
CspAI	ACCGGT	1 cut(s)	1676
CviAII	CATG	8 cut(s)	641, 877, 1363, 1448, 1646, 1898, 2092, 2420
CviQI	GTAC	9 cut(s)	636, 1163, 1415, 1621, 1628, 1650, 1847, 1879, 2161
DraI	TTTAAA	1 cut(s)	787
DraIII	CACNNNGTG	1 cut(s)	130
EaeI	YGGCCR	4 cut(s)	208, 294, 738, 2298
Eam1104I	CTCTTC	2 cut(s)	1050, 1309
EarI	CTCTTC	2 cut(s)	1050, 1309
Ecl136II	GAGCTC	1 cut(s)	529
Eco130I	CCWWGG	5 cut(s)	1006, 1146, 1173, 1486, 2206
Eco147I	AGGCCT	3 cut(s)	766, 1434, 1485
Eco24I	GRGCYC	1 cut(s)	531
Eco47I	GGWCC	3 cut(s)	587, 709, 881
Eco53kI	GAGCTC	1 cut(s)	529
Eco57I	CTGAAG	4 cut(s)	570, 1139, 1722, 1835
Eco81I	CCTNAGG	2 cut(s)	591, 2271
Eco88I	CYCGRG	1 cut(s)	303
EcoICRI	GAGCTC	1 cut(s)	529
EcoO109I	RGGNCCY	1 cut(s)	709
EcoRI	GAATTC	1 cut(s)	1115
EcoRII	CCWGG	5 cut(s)	442, 721, 856, 1419, 1840
EcoT14I	CCWWGG	5 cut(s)	1006, 1146, 1173, 1486, 2206
EcoT22I	ATGCAT	2 cut(s)	1390, 2188
EcoT38I	GRGCYC	1 cut(s)	531
ErhI	CCWWGG	5 cut(s)	1006, 1146, 1173, 1486, 2206
FaeI	CATG	8 cut(s)	644, 880, 1366, 1451, 1649, 1901, 2095, 2423
FalI	AAGNNNNNCTT	2 cut(s)	1419, 1451
FaqI	GGGAC	3 cut(s)	150, 1484, 2404
FatI	CATG	8 cut(s)	640, 876, 1362, 1447, 1645, 1897, 2091, 2419
FauI	CCCGC	1 cut(s)	2381
FbaI	TGATCA	3 cut(s)	2050, 2067, 2448
FokI	GGATG	6 cut(s)	425, 444, 518, 951, 1286, 1618
FriOI	GRGCYC	1 cut(s)	531
FspBI	CTAG	7 cut(s)	522, 920, 1007, 1121, 1187, 1380, 2121
GsuI	CTGGAG	2 cut(s)	1227, 1824
HaeIII	GGCC	9 cut(s)	40, 210, 296, 740, 766, 1152, 1434, 1485, 2300
HapII	CCGG	4 cut(s)	304, 1507, 1520, 1677
HgaI	GACGC	2 cut(s)	380, 2401
Hin1II	CATG	8 cut(s)	644, 880, 1366, 1451, 1649, 1901, 2095, 2423
HinfI	GANTC	7 cut(s)	518, 980, 1002, 1142, 1787, 2251, 2428
HpaII	CCGG	4 cut(s)	304, 1507, 1520, 1677
HphI	GGTGA	4 cut(s)	405, 958, 1364, 2098
Hpy166II	GTNNAC	6 cut(s)	449, 1036, 1354, 1372, 1579, 2161
Hpy188I	TCNGA	4 cut(s)	753, 771, 1158, 2505
Hpy8I	GTNNAC	6 cut(s)	449, 1036, 1354, 1372, 1579, 2161
HpyAV	CCTTC	6 cut(s)	566, 679, 1163, 1266, 1340, 2243
HpyCH4IV	ACGT	2 cut(s)	634, 1222
HpyF10VI	GCNNNNNNNGC	8 cut(s)	61, 98, 323, 371, 473, 929, 1661, 2330
HpySE526I	ACGT	2 cut(s)	634, 1222
Hsp92II	CATG	8 cut(s)	644, 880, 1366, 1451, 1649, 1901, 2095, 2423
Kpn2I	TCCGGA	1 cut(s)	1519
Ksp22I	TGATCA	3 cut(s)	2050, 2067, 2448
LweI	GCATC	5 cut(s)	222, 466, 929, 1596, 2012
MaeI	CTAG	7 cut(s)	522, 920, 1007, 1121, 1187, 1380, 2121
MaeII	ACGT	2 cut(s)	634, 1222
MaeIII	GTNAC	6 cut(s)	342, 838, 946, 1123, 1552, 2167
MfeI	CAATTG	3 cut(s)	600, 933, 1689
MflI	RGATCY	2 cut(s)	244, 2117
MhlI	GDGCHC	4 cut(s)	451, 531, 1038, 1327
MlsI	TGGCCA	3 cut(s)	296, 740, 2300
MluNI	TGGCCA	3 cut(s)	296, 740, 2300
MlyI	GAGTC	3 cut(s)	527, 1151, 2245
MmeI	TCCRAC	1 cut(s)	1159
Mox20I	TGGCCA	3 cut(s)	296, 740, 2300
Mph1103I	ATGCAT	2 cut(s)	1390, 2188
MroI	TCCGGA	1 cut(s)	1519
MscI	TGGCCA	3 cut(s)	296, 740, 2300
MseI	TTAA	5 cut(s)	273, 629, 732, 786, 2058
MslI	CAYNNNNRTG	4 cut(s)	462, 536, 1330, 1361
Msp20I	TGGCCA	3 cut(s)	296, 740, 2300
MspA1I	CMGCKG	2 cut(s)	1094, 1457
MspI	CCGG	4 cut(s)	304, 1507, 1520, 1677
MspR9I	CCNGG	7 cut(s)	304, 305, 444, 723, 858, 1421, 1842
MunI	CAATTG	3 cut(s)	600, 933, 1689
Mva1269I	GAATGC	2 cut(s)	467, 2480
MvaI	CCWGG	5 cut(s)	444, 723, 858, 1421, 1842
MwoI	GCNNNNNNNGC	8 cut(s)	61, 98, 323, 371, 473, 929, 1661, 2330
NciI	CCSGG	2 cut(s)	304, 305
NlaIII	CATG	8 cut(s)	644, 880, 1366, 1451, 1649, 1901, 2095, 2423
NlaIV	GGNNCC	3 cut(s)	882, 1254, 1728
NmuCI	GTSAC	3 cut(s)	342, 946, 1123
NsiI	ATGCAT	2 cut(s)	1390, 2188
NspV	TTCGAA	1 cut(s)	570
PagI	TCATGA	2 cut(s)	640, 2419
PceI	AGGCCT	3 cut(s)	766, 1434, 1485
PctI	GAATGC	2 cut(s)	467, 2480
PfeI	GAWTC	4 cut(s)	980, 1002, 1787, 2428
PfoI	TCCNGGA	1 cut(s)	1840
PinAI	ACCGGT	1 cut(s)	1676
PleI	GAGTC	3 cut(s)	526, 1150, 2245
PpsI	GAGTC	3 cut(s)	526, 1150, 2245
Ppu21I	YACGTR	1 cut(s)	635
PpuMI	RGGWCCY	1 cut(s)	709
PsiI	TTATAA	1 cut(s)	965
Psp124BI	GAGCTC	1 cut(s)	531
Psp5II	RGGWCCY	1 cut(s)	709
Psp6I	CCWGG	5 cut(s)	442, 721, 856, 1419, 1840
PspGI	CCWGG	5 cut(s)	442, 721, 856, 1419, 1840
PspN4I	GGNNCC	3 cut(s)	882, 1254, 1728
PspPI	GGNCC	4 cut(s)	587, 709, 881, 1150
PspPPI	RGGWCCY	1 cut(s)	709
PstI	CTGCAG	3 cut(s)	696, 874, 1877
PstNI	CAGNNNCTG	3 cut(s)	267, 374, 893
PsuI	RGATCY	2 cut(s)	244, 2117
RsaI	GTAC	9 cut(s)	637, 1164, 1416, 1622, 1629, 1651, 1848, 1880, 2162
RsaNI	GTAC	9 cut(s)	636, 1163, 1415, 1621, 1628, 1650, 1847, 1879, 2161
RseI	CAYNNNNRTG	4 cut(s)	462, 536, 1330, 1361
SacI	GAGCTC	1 cut(s)	531
SaqAI	TTAA	5 cut(s)	273, 629, 732, 786, 2058
Sau96I	GGNCC	4 cut(s)	587, 709, 881, 1150
ScaI	AGTACT	1 cut(s)	1848
SchI	GAGTC	3 cut(s)	527, 1151, 2245
ScrFI	CCNGG	7 cut(s)	304, 305, 444, 723, 858, 1421, 1842
SduI	GDGCHC	4 cut(s)	451, 531, 1038, 1327
SfaNI	GCATC	5 cut(s)	222, 466, 929, 1596, 2012
SfcI	CTRYAG	5 cut(s)	366, 692, 870, 1582, 1873
SfuI	TTCGAA	1 cut(s)	570
SinI	GGWCC	3 cut(s)	587, 709, 881
SmaI	CCCGGG	1 cut(s)	305
SmiMI	CAYNNNNRTG	4 cut(s)	462, 536, 1330, 1361
SmlI	CTYRAG	2 cut(s)	674, 1570
SmoI	CTYRAG	2 cut(s)	674, 1570
SseBI	AGGCCT	3 cut(s)	766, 1434, 1485
SsiI	CCGC	8 cut(s)	41, 211, 311, 1019, 1094, 1457, 1952, 2388
SspI	AATATT	2 cut(s)	748, 1705
SspMI	CTAG	7 cut(s)	522, 920, 1007, 1121, 1187, 1380, 2121
SstI	GAGCTC	1 cut(s)	531
StuI	AGGCCT	3 cut(s)	766, 1434, 1485
StyD4I	CCNGG	7 cut(s)	302, 303, 442, 721, 856, 1419, 1840
StyI	CCWWGG	5 cut(s)	1006, 1146, 1173, 1486, 2206
TaiI	ACGT	2 cut(s)	637, 1225
TaqI	TCGA	4 cut(s)	156, 427, 570, 1140
TatI	WGTACW	2 cut(s)	1846, 2160
TauI	GCSGC	5 cut(s)	43, 213, 314, 1021, 1955
TfiI	GAWTC	4 cut(s)	980, 1002, 1787, 2428
Tru1I	TTAA	5 cut(s)	273, 629, 732, 786, 2058
Tru9I	TTAA	5 cut(s)	273, 629, 732, 786, 2058
TscAI	CASTG	8 cut(s)	57, 297, 553, 1056, 1078, 1303, 2070, 2461
TseFI	GTSAC	3 cut(s)	342, 946, 1123
Tsp45I	GTSAC	3 cut(s)	342, 946, 1123
TspDTI	ATGAA	7 cut(s)	993, 1128, 1290, 1601, 1710, 1886, 2408
TspGWI	ACGGA	2 cut(s)	873, 1053
TspMI	CCCGGG	1 cut(s)	303
TspRI	CASTG	8 cut(s)	57, 297, 553, 1056, 1078, 1303, 2070, 2461
VneI	GTGCAC	2 cut(s)	447, 1034
VpaK11BI	GGWCC	3 cut(s)	587, 709, 881
XapI	RAATTY	6 cut(s)	382, 1060, 1115, 1200, 1684, 2283
XbaI	TCTAGA	1 cut(s)	1186
XmaI	CCCGGG	1 cut(s)	303
XmaJI	CCTAGG	1 cut(s)	1006
XspI	CTAG	7 cut(s)	522, 920, 1007, 1121, 1187, 1380, 2121
ZrmI	AGTACT	1 cut(s)	1848
Zsp2I	ATGCAT	2 cut(s)	1390, 2188

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.