Rorug02G0364100

ABC transporter G family member

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Reverse (-)
46174956 .. 46179449
4494 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0364100.1

Sequence Viewer

Length: 1344 bp
ATGAGTTTTGCTGCTGTGTTAATACCCATGTGGGTCTTAACCACCGCTCTGATTGTAACCATAATTGAGGGCAGGCCAGACCCAACAGCTTCCACCACTTCTGGCCACATTATGCTACTTGAGGAACAACCCATTTCTCACTTTTCTGCAAAAATGGAAGCTCAATCTCCAGGAGTCCCTGAGGTTAGAGTAGTTCACCATCAAGATTTGAACAAGAGCATTCTGATAGCACTCATTGTTGCTTCCACACTCCTTGTTGGAATTCTTCTGTTCCTGTCATGTTGTTGGATCTATAGACAGAAAATGTCGAAACACTCTAATGGGAAAAGGCAAAAGACAAACGAGGTTCCAATAGGGACGCCATTGAGTGCACTTATGGTTGAATTTAATTCCTTGATGTTGGGGAATAGAAAGGGCTCGGTTGTTGTATTCAATTATCAATTGCTGGAAGCTGCAACAAACAAGTTCAGTGAAAGTAATATTTTGGGTGAGGGTAGTTCTGGACCTGTTTACAGGGCTAGTTTTGATGGAAAATTCATTGCAGCTGTTAAGAAAGTAAACGGCATAAGACAGGAGGCTGAAAGAGAATTTGAGAATGAGGTGAACTGGTTGGGAAAAATTCGGCATCAAAACATCATCAAACTTTTGGGTTACTGTGTTCATGGAAAAACAAGGTTTCTTGTGTATGAAATGATGCAGAATGGCTCCTTACAAACTCAATTGTATGGACCCAGTCATGGATCAGCATTGACATGGCATCTGCGGTTGAAAATAGCTGTTGATGTTGCCAGGGGATTGGAATATCTTCATGAGCACTGCAATCCGCCTGCGGTGCATAGAGACCTGAAGTCATCTAACATTCTTCTCGATTCCAATTTTAATGCTAAGCTTTCAGATTTTGGTCTTACTGTCACTTCGGGATTGAAGAGTAAGGAGAACATAAAGCTGTCAGGAAATTTGGGCTGTGTAGCACCAGAATATAATTTGGATGGTAAGTTAACGGACAAAAGTGATGTCTATGCTTTCGGAGTAGTTCTCTTGGAGCTCTTGATGGGAAGAAAGTTGGTGGAACATAAAGCAGCAGATGAATCCCAATCTATTATCACATGGGCCATGCCCCAGCTCACTGACAGATCAAGGCTTCCAAACATTGTGGATTGCGTGATAAAAGATACCATGGATTTAAAACACTTATACCAGGTTGCTGCTGTGGCAGTATTATGTGTGCAACCTGAACCAAGTTATCGACCTTTGATAACGGATGTACTGCACTCGCTAATCCCTCTTGTACCTATGGATCTTGGAGGGTCGCTGAGAATTGCAGACTGCATACCCTCTGTTTGA

Protein Analysis

447

Amino Acids

49.37

Weight (kDa)

8.05

Isoelectric Point (pI)

32.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 157 - 422 9.5e-39 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 160 - 388 7.7e-42 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 47
AciI CCGC 4 cut(s) 45, 763, 824, 830
AclWI GGATC 3 cut(s) 296, 748, 1305
AcoI YGGCCR 1 cut(s) 103
AcsI RAATTY 6 cut(s) 261, 383, 533, 587, 618, 955
AcuI CTGAAG 1 cut(s) 866
AcyI GRCGYC 1 cut(s) 359
AfaI GTAC 2 cut(s) 1266, 1290
AfiI CCNNNNNNNGG 1 cut(s) 737
AgsI TTSAA 5 cut(s) 211, 383, 433, 769, 925
AhdI GACNNNNNGTC 1 cut(s) 847
AjnI CCWGG 3 cut(s) 169, 788, 1197
AluBI AGCT 9 cut(s) 89, 161, 452, 545, 776, 889, 946, 1045, 1123
AluI AGCT 9 cut(s) 89, 161, 452, 545, 776, 889, 946, 1045, 1123
Alw21I GWGCWC 3 cut(s) 373, 816, 1047
Alw26I GTCTC 1 cut(s) 834
Alw44I GTGCAC 1 cut(s) 369
AlwI GGATC 3 cut(s) 296, 748, 1305
AoxI GGCC 3 cut(s) 74, 103, 1110
ApaLI GTGCAC 1 cut(s) 369
ApeKI GCWGC 5 cut(s) 11, 452, 542, 1079, 1205
ApoI RAATTY 6 cut(s) 261, 383, 533, 587, 618, 955
ArsI GACNNNNNNTTYG 2 cut(s) 999, 1031
Asp700I GAANNNNTTC 1 cut(s) 804
AspS9I GGNCC 3 cut(s) 503, 728, 1110
AsuHPI GGTGA 3 cut(s) 188, 500, 613
AvaII GGWCC 2 cut(s) 503, 728
AxyI CCTNAGG 1 cut(s) 180
BaeGI GKGCMC 1 cut(s) 373
BalI TGGCCA 1 cut(s) 105
BanII GRGCYC 2 cut(s) 419, 1047
Bbv12I GWGCWC 3 cut(s) 373, 816, 1047
BbvI GCAGC 4 cut(s) 439, 554, 1091, 1192
BccI CCATC 4 cut(s) 207, 521, 983, 1045
BceAI ACGGC 1 cut(s) 577
BciT130I CCWGG 3 cut(s) 171, 790, 1199
BcoDI GTCTC 1 cut(s) 834
BfaI CTAG 1 cut(s) 519
BfmI CTRYAG 1 cut(s) 292
BisI GCNGC 5 cut(s) 12, 453, 543, 1080, 1206
BlpI GCTNAGC 1 cut(s) 885
BlsI GCNGC 5 cut(s) 13, 454, 544, 1081, 1207
Bme1390I CCNGG 3 cut(s) 171, 790, 1199
Bme18I GGWCC 2 cut(s) 503, 728
BmeRI GACNNNNNGTC 1 cut(s) 847
BmgT120I GGNCC 3 cut(s) 503, 728, 1110
BmiI GGNNCC 3 cut(s) 348, 706, 730
BmrFI CCNGG 3 cut(s) 171, 790, 1199
BmrI ACTGGG 1 cut(s) 726
BmsI GCATC 3 cut(s) 634, 684, 766
BmuI ACTGGG 1 cut(s) 726
BplI GAGNNNNNCTC 2 cut(s) 1020, 1052
BpmI CTGGAG 1 cut(s) 153
Bpu1102I GCTNAGC 1 cut(s) 885
BpuEI CTTGAG 1 cut(s) 140
BsaHI GRCGYC 1 cut(s) 359
BsaI GGTCTC 1 cut(s) 834
BsaJI CCNNGG 2 cut(s) 789, 1176
Bsc4I CCNNNNNNNGG 1 cut(s) 737
Bse1I ACTGG 2 cut(s) 611, 732
Bse21I CCTNAGG 1 cut(s) 180
Bse3DI GCAATG 1 cut(s) 537
BseBI CCWGG 3 cut(s) 171, 790, 1199
BseDI CCNNGG 2 cut(s) 789, 1176
BseGI GGATG 2 cut(s) 994, 1267
BseLI CCNNNNNNNGG 1 cut(s) 737
BseMI GCAATG 1 cut(s) 537
BseMII CTCAG 2 cut(s) 171, 1304
BseNI ACTGG 2 cut(s) 611, 732
BseSI GKGCMC 1 cut(s) 373
BseXI GCAGC 4 cut(s) 439, 554, 1091, 1192
BseYI CCCAGC 1 cut(s) 1119
BsgI GTGCAG 1 cut(s) 1253
BshFI GGCC 3 cut(s) 76, 105, 1112
BsiHKAI GWGCWC 3 cut(s) 373, 816, 1047
BslFI GGGAC 2 cut(s) 161, 370
BslI CCNNNNNNNGG 1 cut(s) 737
BsmAI GTCTC 1 cut(s) 834
BsmFI GGGAC 2 cut(s) 161, 370
BsmI GAATGC 1 cut(s) 219
BsnI GGCC 3 cut(s) 76, 105, 1112
Bso31I GGTCTC 1 cut(s) 834
Bsp1286I GDGCHC 4 cut(s) 373, 419, 816, 1047
Bsp143I GATC 4 cut(s) 288, 740, 1133, 1297
Bsp1720I GCTNAGC 1 cut(s) 885
Bsp19I CCATGG 1 cut(s) 1176
BspACI CCGC 4 cut(s) 45, 763, 824, 830
BspANI GGCC 3 cut(s) 76, 105, 1112
BspCNI CTCAG 2 cut(s) 172, 1305
BspHI TCATGA 1 cut(s) 808
BspLI GGNNCC 3 cut(s) 348, 706, 730
BspPI GGATC 3 cut(s) 296, 748, 1305
BspTNI GGTCTC 1 cut(s) 834
BsrBI CCGCTC 1 cut(s) 47
BsrDI GCAATG 1 cut(s) 537
BsrI ACTGG 2 cut(s) 611, 732
BssECI CCNNGG 2 cut(s) 789, 1176
BssMI GATC 4 cut(s) 288, 740, 1133, 1297
BssNI GRCGYC 1 cut(s) 359
BssT1I CCWWGG 1 cut(s) 1176
Bst2UI CCWGG 3 cut(s) 171, 790, 1199
Bst4CI ACNGT 2 cut(s) 656, 910
Bst6I CTCTTC 1 cut(s) 920
BstACI GRCGYC 1 cut(s) 359
BstC8I GCNNGC 2 cut(s) 74, 828
BstDEI CTNAG 3 cut(s) 180, 885, 1313
BstDSI CCRYGG 1 cut(s) 1176
BstF5I GGATG 2 cut(s) 994, 1267
BstKTI GATC 4 cut(s) 291, 743, 1136, 1300
BstMAI GTCTC 1 cut(s) 834
BstMBI GATC 4 cut(s) 288, 740, 1133, 1297
BstMWI GCNNNNNNNGC 2 cut(s) 832, 1211
BstNI CCWGG 3 cut(s) 171, 790, 1199
BstSCI CCNGG 3 cut(s) 169, 788, 1197
BstSFI CTRYAG 1 cut(s) 292
BstSLI GKGCMC 1 cut(s) 373
BstV1I GCAGC 4 cut(s) 439, 554, 1091, 1192
BstX2I RGATCY 2 cut(s) 288, 1297
BstXI CCANNNNNNTGG 1 cut(s) 796
BstYI RGATCY 2 cut(s) 288, 1297
Bsu36I CCTNAGG 1 cut(s) 180
BsuRI GGCC 3 cut(s) 76, 105, 1112
BtgI CCRYGG 1 cut(s) 1176
BtsCI GGATG 2 cut(s) 994, 1267
BtsI GCAGTG 1 cut(s) 814
BtsIMutI CAGTG 3 cut(s) 475, 814, 1125
Cac8I GCNNGC 2 cut(s) 74, 828
CciI TCATGA 1 cut(s) 808
Cfr13I GGNCC 3 cut(s) 503, 728, 1110
CseI GACGC 1 cut(s) 367
CsiI ACCWGGT 1 cut(s) 1197
Csp6I GTAC 2 cut(s) 1265, 1289
CspCI CAANNNNNGTGG 4 cut(s) 235, 270, 1134, 1169
CviAII CATG 9 cut(s) 28, 279, 662, 737, 753, 809, 1107, 1114, 1177
CviQI GTAC 2 cut(s) 1265, 1289
DdeI CTNAG 3 cut(s) 180, 885, 1313
DpnI GATC 4 cut(s) 290, 742, 1135, 1299
DpnII GATC 4 cut(s) 288, 740, 1133, 1297
DraI TTTAAA 1 cut(s) 1185
DriI GACNNNNNGTC 1 cut(s) 847
EaeI YGGCCR 1 cut(s) 103
Eam1104I CTCTTC 1 cut(s) 920
Eam1105I GACNNNNNGTC 1 cut(s) 847
EarI CTCTTC 1 cut(s) 920
EciI GGCGGA 1 cut(s) 813
Ecl136II GAGCTC 1 cut(s) 1045
Eco130I CCWWGG 1 cut(s) 1176
Eco24I GRGCYC 2 cut(s) 419, 1047
Eco31I GGTCTC 1 cut(s) 834
Eco47I GGWCC 2 cut(s) 503, 728
Eco53kI GAGCTC 1 cut(s) 1045
Eco57I CTGAAG 1 cut(s) 866
Eco81I CCTNAGG 1 cut(s) 180
EcoICRI GAGCTC 1 cut(s) 1045
EcoRI GAATTC 1 cut(s) 261
EcoRII CCWGG 3 cut(s) 169, 788, 1197
EcoT14I CCWWGG 1 cut(s) 1176
EcoT38I GRGCYC 2 cut(s) 419, 1047
ErhI CCWWGG 1 cut(s) 1176
FaeI CATG 9 cut(s) 31, 282, 665, 740, 756, 812, 1110, 1117, 1180
FaqI GGGAC 2 cut(s) 161, 370
FatI CATG 9 cut(s) 27, 278, 661, 736, 752, 808, 1106, 1113, 1176
Fnu4HI GCNGC 5 cut(s) 12, 453, 543, 1080, 1206
FokI GGATG 2 cut(s) 1001, 1274
FriOI GRGCYC 2 cut(s) 419, 1047
Fsp4HI GCNGC 5 cut(s) 12, 453, 543, 1080, 1206
FspBI CTAG 1 cut(s) 519
GluI GCNGC 5 cut(s) 12, 453, 543, 1080, 1206
GsaI CCCAGC 1 cut(s) 1123
GsuI CTGGAG 1 cut(s) 153
HaeIII GGCC 3 cut(s) 76, 105, 1112
HgaI GACGC 1 cut(s) 367
Hin1I GRCGYC 1 cut(s) 359
Hin1II CATG 9 cut(s) 31, 282, 665, 740, 756, 812, 1110, 1117, 1180
HincII GTYRAC 1 cut(s) 999
HindII GTYRAC 1 cut(s) 999
HindIII AAGCTT 1 cut(s) 887
HinfI GANTC 3 cut(s) 174, 869, 1088
HpaI GTTAAC 1 cut(s) 999
HphI GGTGA 3 cut(s) 188, 500, 613
Hpy166II GTNNAC 6 cut(s) 196, 371, 511, 559, 604, 999
Hpy188I TCNGA 4 cut(s) 51, 225, 895, 1028
Hpy188III TCNNGA 7 cut(s) 203, 501, 809, 866, 918, 951, 1048
Hpy8I GTNNAC 6 cut(s) 196, 371, 511, 559, 604, 999
HpyCH4III ACNGT 2 cut(s) 656, 910
HpyF10VI GCNNNNNNNGC 2 cut(s) 832, 1211
HpyF3I CTNAG 3 cut(s) 180, 885, 1313
Hsp92I GRCGYC 1 cut(s) 359
Hsp92II CATG 9 cut(s) 31, 282, 665, 740, 756, 812, 1110, 1117, 1180
KspAI GTTAAC 1 cut(s) 999
Kzo9I GATC 4 cut(s) 288, 740, 1133, 1297
LmnI GCTCC 2 cut(s) 710, 1042
Lsp1109I GCAGC 4 cut(s) 439, 554, 1091, 1192
LweI GCATC 3 cut(s) 634, 684, 766
MabI ACCWGGT 1 cut(s) 1197
MaeI CTAG 1 cut(s) 519
MaeIII GTNAC 3 cut(s) 55, 650, 910
MalI GATC 4 cut(s) 290, 742, 1135, 1299
MbiI CCGCTC 1 cut(s) 47
MboI GATC 4 cut(s) 288, 740, 1133, 1297
MboII GAAGA 5 cut(s) 257, 797, 854, 937, 1068
MfeI CAATTG 2 cut(s) 440, 719
MflI RGATCY 2 cut(s) 288, 1297
MhlI GDGCHC 4 cut(s) 373, 419, 816, 1047
MlsI TGGCCA 1 cut(s) 105
MluNI TGGCCA 1 cut(s) 105
MlyI GAGTC 1 cut(s) 183
MmeI TCCRAC 2 cut(s) 238, 266
MnlI CCTC 9 cut(s) 61, 115, 175, 337, 484, 568, 592, 1293, 1298
Mox20I TGGCCA 1 cut(s) 105
MroXI GAANNNNTTC 1 cut(s) 804
MscI TGGCCA 1 cut(s) 105
MseI TTAA 7 cut(s) 20, 38, 387, 549, 879, 998, 1184
MslI CAYNNNNRTG 2 cut(s) 318, 751
Msp20I TGGCCA 1 cut(s) 105
MspA1I CMGCKG 1 cut(s) 545
MspR9I CCNGG 3 cut(s) 171, 790, 1199
MunI CAATTG 2 cut(s) 440, 719
Mva1269I GAATGC 1 cut(s) 219
MvaI CCWGG 3 cut(s) 171, 790, 1199
MwoI GCNNNNNNNGC 2 cut(s) 832, 1211
NcoI CCATGG 1 cut(s) 1176
NdeII GATC 4 cut(s) 288, 740, 1133, 1297
NlaIII CATG 9 cut(s) 31, 282, 665, 740, 756, 812, 1110, 1117, 1180
NlaIV GGNNCC 3 cut(s) 348, 706, 730
NmuCI GTSAC 1 cut(s) 910
PagI TCATGA 1 cut(s) 808
PctI GAATGC 1 cut(s) 219
PdmI GAANNNNTTC 1 cut(s) 804
PfeI GAWTC 2 cut(s) 869, 1088
PflFI GACNNNGTC 1 cut(s) 732
PfoI TCCNGGA 1 cut(s) 169
PkrI GCNGC 5 cut(s) 13, 454, 544, 1081, 1207
PleI GAGTC 1 cut(s) 182
PpsI GAGTC 1 cut(s) 182
Psp124BI GAGCTC 1 cut(s) 1047
Psp6I CCWGG 3 cut(s) 169, 788, 1197
PspFI CCCAGC 1 cut(s) 1119
PspGI CCWGG 3 cut(s) 169, 788, 1197
PspN4I GGNNCC 3 cut(s) 348, 706, 730
PspPI GGNCC 3 cut(s) 503, 728, 1110
PsuI RGATCY 2 cut(s) 288, 1297
PsyI GACNNNGTC 1 cut(s) 732
PvuII CAGCTG 1 cut(s) 545
RsaI GTAC 2 cut(s) 1266, 1290
RsaNI GTAC 2 cut(s) 1265, 1289
RseI CAYNNNNRTG 2 cut(s) 318, 751
SacI GAGCTC 1 cut(s) 1047
SaqAI TTAA 7 cut(s) 20, 38, 387, 549, 879, 998, 1184
SatI GCNGC 5 cut(s) 12, 453, 543, 1080, 1206
Sau3AI GATC 4 cut(s) 288, 740, 1133, 1297
Sau96I GGNCC 3 cut(s) 503, 728, 1110
SchI GAGTC 1 cut(s) 183
ScrFI CCNGG 3 cut(s) 171, 790, 1199
SduI GDGCHC 4 cut(s) 373, 419, 816, 1047
SexAI ACCWGGT 1 cut(s) 1197
SfaNI GCATC 3 cut(s) 634, 684, 766
SfcI CTRYAG 1 cut(s) 292
SinI GGWCC 2 cut(s) 503, 728
SmiMI CAYNNNNRTG 2 cut(s) 318, 751
SmlI CTYRAG 1 cut(s) 119
SmoI CTYRAG 1 cut(s) 119
SsiI CCGC 4 cut(s) 45, 763, 824, 830
SspI AATATT 1 cut(s) 481
SspMI CTAG 1 cut(s) 519
SstI GAGCTC 1 cut(s) 1047
StyD4I CCNGG 3 cut(s) 169, 788, 1197
StyI CCWWGG 1 cut(s) 1176
TaaI ACNGT 2 cut(s) 656, 910
TaqI TCGA 3 cut(s) 308, 867, 1246
TatI WGTACW 1 cut(s) 1264
TfiI GAWTC 2 cut(s) 869, 1088
Tru1I TTAA 7 cut(s) 20, 38, 387, 549, 879, 998, 1184
Tru9I TTAA 7 cut(s) 20, 38, 387, 549, 879, 998, 1184
TscAI CASTG 3 cut(s) 475, 821, 1132
TseFI GTSAC 1 cut(s) 910
TseI GCWGC 5 cut(s) 11, 452, 542, 1079, 1205
Tsp45I GTSAC 1 cut(s) 910
TspDTI ATGAA 5 cut(s) 526, 650, 702, 797, 1101
TspGWI ACGGA 2 cut(s) 1016, 1274
TspRI CASTG 3 cut(s) 475, 821, 1132
Tth111I GACNNNGTC 1 cut(s) 732
VneI GTGCAC 1 cut(s) 369
VpaK11BI GGWCC 2 cut(s) 503, 728
XapI RAATTY 6 cut(s) 261, 383, 533, 587, 618, 955
XmnI GAANNNNTTC 1 cut(s) 804
XspI CTAG 1 cut(s) 519
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.