MD00G1214200.v1.1

ABC transporter G family member

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr00
Physical Location & Seq
Reverse (-)
51072863 .. 51078683
5821 bp
Loading structure...
UTR
Exon/CDS
Intron
MD00G1214200.v1.1.491

Sequence Viewer

Length: 3342 bp
ATGGTCTCCAAAGGCGCCAACTTTGGCACATTTGTTTCAGTTGGGGTTTTGGTTCTGTGCTGGGTGCACTTTGTGGAGTGCCAGGATGTGGGGGACTATGACCAAATTGACAACCCGGCAGTTCTTCCTCTCATCACTCATATTGTGTACGGACGCATCTCCAATGTCACTGCAGTTCTCAGCCGAGAAATCAGCAATCGTTCCAGCTTCTGTGTCAAGGACCCGGAAGCCGATTGGAACGAGGCCTTTAATTTTTCCTCCAGTGTGGATTTCTTAACTTCCTGCATTCAAAAGACTAAAGGAGATATTACCCGACGTTTGTGTACAGCAGCCGAAATGAAGTTCTACTTCAACAGTTTTTTTGAAAAATCGGAGGGTGCAAATTACTTAAGACCGAACAAGAACTGTAATTTGACCGCATGGATTTCTGGGTGTGAGCCAGGATGGGCTTGCAGTGTTGGTCCAAATAAGCAGGTTGACCTTGAAAATTCACAGGACATCCCAGCTAGGACTCAGAGCTGCCAACCTTGTTGTGAAGGTTTCTTTTGCCCCCATGGTCTCACATGCATGATATCTTGCCCATCAGGTTCTTATTGTCCCCAAGCAACGCTGGACAAATCAACCGGTCTGTGTGAACCATACAATTACCAATTACCTCCGGGGCAACCAAATCATACTTGTGGAGGAGCAAATTTGTGGGCTGATGTTGGTAGTAGTAGTGAAATATTTTGTTCAGCTGGATCATATTGCCCAACCACCGTGAAAAGCATTCCTTGTAGTAGCGGGCATTACTGCAGAATGGGTTCTACATCTGAGAAACGCTGCTTTGCTTTGACTTCCTGCAATCCAAACACCGCAAATCAAAATGTGCATGCATATGGAATACTGCTAATTGCAGCTCTGAGTACTCTGCTTCTTATTATATACAATTGTTCAGATCAAGTTCTCACCACTAGGGAGAGGAGACTCGCCAAATCCCGAGAAGCAGCAGCCAGAAGTGCAAGGGAAATGGCAAAAGCACGCCAAAGATGGAAATCGGCAAAAGATACTGCTAAGAAGCATGCAGGTGGATTGCAGGCTCACTTATCACGTACATTTTCTCGAAAAAAGTATAGCTCAGAACTTAAGAAACTTGAGATTTCAACTCAATCTAGACCTGACACAGATGATGACCTTTCGATACCACCACATCCAAGTAGATCTAGTGTTTCTCAGTCCTCAACTGTGCCATCAGAAGGAAAGGAAAAGGAACCTACCGAGCTCATGCAAATTATGCGTAAAATTGAAGAAGACCCTGAGGGTTATGAAGGTTTCAGTATTGGATCTGAGGATACGAATGTAGGAAATGTGCCAAAAGGTAAGAAGATCAATACTCATAGCCAAATTTTCAAGTATGCTTATGGTCAACTTGAGAAAGAGAAGGCTCAGCTGCAAGAGTACAAGGACCTAACCTTCTCAGGGGTGGTTAAAATGGCCACTAATAACAAAATAAGGAAACGGCTTCTCATTGAGATTTCTTTCAAAGACCTAACACTTACTTTGAAAGCAAAAAACAAGCATCTACTGAGGTGTGTAACTGGTAAAATTAGGCCTGGCCGCATCACTGCTGTTATGGGTCCATCAGGGGCTGGAAAAACAACGTTTCTTTCTGCCCTAGCTGGAAAAGCAATTGGATGCAGGAGGACTGGTTTAATTCTCATAAACGGAAAGAATACATCAATCCATTCGTATAAAAAAATCGTAGGGTTTGTACCACAAGATGATATTGTGCATGGAAACTTGACTGTGGAAGAGAATCTATGGTTCAGTGCAAAATGCAGATTATCTGTGGACTTACCGAAACCGGATAAAGTGTTAGTGGTTGAACGAGTTATTGAGTCCTTGGGGCTTCAGACAGTACGTGGTTCCTTGGTTGGAACAGTAGAGAAGCGAGGAATTTCTGGAGGCCAGAGGAAACGTGTAAATGTTGGCTTGGAAATGGTTATGGAACCTTCACTTTTGATTTTGGATGAACCTACATCCGGTCTAGACAGCGCCTCTTCCCAGCTACTTCTTAGAGCACTTACACGGGAAGCTCTTGAAGGGGTAAACATCTGCATGGTGGTTCACCAGCCTAGCTATGCCTTGTTCAAGATGTTTGATGATTTGGTACTCCTGGCAAAAGGTGGTCTTACTGTCTATCATGGACCAACAAAGAAAGTAGAGGAATACTTTGCAGGCCTTGGGATCAATGTCCCAGACCGAGTCAACCCTCCAGACCACTTCATTGACATTTTAGAGGGTATAGTTGCTACGGAAATAAGCTCGGGAGTGAGTCATGATGAGCTTCCCATCAGATGGATGCTTCATAATGGGTACTCAGTACCTCCTGAGATGAGGCAGAGTGCCACCGGACTTACAATATCATCAATGGATGAAAATTCAAATCACGAAACAAATTCTTCTGGTGATGATATGATGGAAAAGTCTTTTGCCGGAGAGGTATGGCAAGATGTGAAAAGTACTGTGGATCTGCATCGTGATAGGGTACGGCTCAATTTCTTGAAATCCAAGGATTTATCAAACCGCAGAATCCCGGGTTTATTTCTACAGTACAGATACTTCCTGGGCAGAGTTGGTAAGCAGAGACTTCGGGAAGCTCGTATGCAAGCAGTAGATTATTTGATTTTATTACTTGCTGGAGCCTGCTTAGGATCCCTTGCGAACGTCAGCGATCAGACCTTTGGTGCAGGCGGTTACACTTATACTATTATTGCAGTTTCTCTACTATGTAAAATTGCGGCTCTGAGGTCGTTTTCTCTAGACAGATTACACTATTGGAGAGAGAGCGCTTCAGGGATGAGCAGCTTGGCTTATTTTCTGGCTAAGGATACTATTGACCATTTTAATACAATGATCAAACCTGTAGTGTATTTGTCCATGTTCTACTTCTTTACCAACCCAAGATCTAGGTTTGCAGATAACTATGTTGTTCTGGTCTGCCTCGTGTATTGTGTAACTGGTATAGCCTACGCGTTAGCAATATTTTTCGAACAAGGTGCAGCCCAACTATCGTCGGTCCTTCTTCCAGTTGTTTTGACTCTTATAGCAACACGGCCACAAGATAGTGCACTTATGAAGAATTTAGCTAAGTTGTGCTACCCGAGGTGGGCTTTGGAAGCATTTGTGACTGCAAATGCTGAAAGGTATGCTGGAGTATGGCTGATAACTCGCTGCGGTTCACTTCTGAAGGCCGGCTATAACCTTCATAACTGGAATCTTTGTATAATTATCCTAACATTCGTAGGTATAGTTAGTCGGGCGATAGCATTCTTTTGTATGGTGACCTTTCAGAAGAAATGA

Protein Analysis

1114

Amino Acids

123.11

Weight (kDa)

8.83

Isoelectric Point (pI)

39.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_tran PF00005 525 - 674 8.3e-24 ABC transporter
ABC2_membrane_7 PF19055 703 - 1113 2.8e-225 ABC-2 type transporter
ABC2_membrane PF01061 871 - 1056 6e-08 ABC-2 type transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1055
Acc36I ACCTGC 2 cut(s) 463, 1055
AccB1I GGYRCC 1 cut(s) 14
AccB7I CCANNNNNTGG 2 cut(s) 88, 2337
AccII CGCG 1 cut(s) 3014
AciI CCGC 8 cut(s) 417, 783, 855, 1597, 2566, 2733, 2780, 3216
AclI AACGTT 1 cut(s) 1640
AclWI GGATC 6 cut(s) 748, 1330, 2234, 2517, 2688, 2701
AcoI YGGCCR 3 cut(s) 1473, 1594, 3095
AcsI RAATTY 7 cut(s) 487, 691, 1383, 1935, 2419, 2437, 3121
AcuI CTGAAG 3 cut(s) 1874, 2817, 3248
AcyI GRCGYC 1 cut(s) 15
AdeI CACNNNGTG 1 cut(s) 73
AfeI AGCGCT 1 cut(s) 2830
AfiI CCNNNNNNNGG 6 cut(s) 88, 1235, 1458, 2021, 2337, 3148
AflII CTTAAG 2 cut(s) 388, 1124
AflIII ACRYGT 2 cut(s) 1957, 3012
AgeI ACCGGT 1 cut(s) 623
AjnI CCWGG 5 cut(s) 81, 439, 1591, 2154, 2604
Alw21I GWGCWC 4 cut(s) 69, 1263, 2062, 3112
Alw26I GTCTC 4 cut(s) 10, 563, 958, 2620
Alw44I GTGCAC 2 cut(s) 65, 3108
AlwI GGATC 6 cut(s) 748, 1330, 2234, 2517, 2688, 2701
AlwNI CAGNNNCTG 2 cut(s) 210, 1628
Ama87I CYCGRG 4 cut(s) 978, 2305, 2575, 3142
Aor51HI AGCGCT 1 cut(s) 2830
AoxI GGCC 8 cut(s) 243, 1473, 1589, 1594, 1945, 2218, 3095, 3231
ApaLI GTGCAC 2 cut(s) 65, 3108
ApoI RAATTY 7 cut(s) 487, 691, 1383, 1935, 2419, 2437, 3121
AsiGI ACCGGT 1 cut(s) 623
Asp700I GAANNNNTTC 1 cut(s) 802
AspLEI GCGC 3 cut(s) 17, 2036, 2831
AspS9I GGNCC 6 cut(s) 220, 461, 1444, 1616, 2186, 3058
AsuC2I CCSGG 5 cut(s) 116, 224, 660, 2576, 2577
AsuHPI GGTGA 4 cut(s) 940, 2099, 2459, 3334
AsuII TTCGAA 1 cut(s) 3030
AvaI CYCGRG 4 cut(s) 978, 2305, 2575, 3142
AvaII GGWCC 6 cut(s) 220, 461, 1444, 1616, 2186, 3058
AxyI CCTNAGG 1 cut(s) 1296
BaeGI GKGCMC 2 cut(s) 69, 3112
BaeI ACNNNNGTAYC 2 cut(s) 1323, 1356
BalI TGGCCA 1 cut(s) 1475
BamHI GGATCC 1 cut(s) 2693
BanI GGYRCC 1 cut(s) 14
BanII GRGCYC 1 cut(s) 1263
BarI GAAGNNNNNNTAC 2 cut(s) 2585, 2617
BauI CACGAG 1 cut(s) 2984
BbsI GAAGAC 1 cut(s) 1296
Bbv12I GWGCWC 4 cut(s) 69, 1263, 2062, 3112
BccI CCATC 8 cut(s) 438, 589, 1023, 1237, 1627, 2331, 2339, 2452
BceAI ACGGC 3 cut(s) 1514, 2546, 3110
BcgI CGANNNNNNTGC 4 cut(s) 2612, 2646, 3020, 3054
BciT130I CCWGG 5 cut(s) 83, 441, 1593, 2156, 2606
BciVI GTATCC 2 cut(s) 1324, 2863
BclI TGATCA 1 cut(s) 2895
BcnI CCSGG 5 cut(s) 116, 224, 660, 2576, 2577
BcoDI GTCTC 4 cut(s) 10, 563, 958, 2620
BfaI CTAG 9 cut(s) 507, 954, 1152, 1203, 1655, 2027, 2115, 2801, 2949
BfmI CTRYAG 4 cut(s) 171, 793, 2588, 2904
BfoI RGCGCY 3 cut(s) 18, 2037, 2832
BfrI CTTAAG 2 cut(s) 388, 1124
BfuAI ACCTGC 2 cut(s) 463, 1055
BfuI GTATCC 2 cut(s) 1324, 2863
BglII AGATCT 2 cut(s) 1199, 2945
BlpI GCTNAGC 1 cut(s) 1425
BmcAI AGTACT 2 cut(s) 907, 2503
Bme18I GGWCC 6 cut(s) 220, 461, 1444, 1616, 2186, 3058
BmeT110I CYCGRG 4 cut(s) 978, 2305, 2575, 3142
BmgT120I GGNCC 6 cut(s) 220, 461, 1444, 1616, 2186, 3058
BmiI GGNNCC 8 cut(s) 16, 222, 1251, 1617, 1906, 1989, 2683, 2695
BmsI GCATC 6 cut(s) 165, 1567, 1608, 1664, 2331, 2524
BpiI GAAGAC 1 cut(s) 1296
BpmI CTGGAG 5 cut(s) 244, 1962, 2238, 2700, 3213
Bpu10I CCTNAGC 2 cut(s) 2689, 2865
Bpu1102I GCTNAGC 1 cut(s) 1425
Bpu14I TTCGAA 1 cut(s) 3030
BpuEI CTTGAG 2 cut(s) 1154, 1430
BpuMI CCSGG 5 cut(s) 116, 224, 660, 2576, 2577
BsaAI YACGTR 2 cut(s) 1091, 1901
BsaBI GATNNNNATC 2 cut(s) 1033, 2514
BsaHI GRCGYC 1 cut(s) 15
BsaI GGTCTC 2 cut(s) 10, 563
BsaJI CCNNGG 9 cut(s) 553, 659, 1881, 1908, 2221, 2550, 2575, 2605, 3143
BsaWI WCCGGW 4 cut(s) 623, 1843, 2021, 2390
BsaXI ACNNNNNCTCC 2 cut(s) 1672, 1702
Bsc4I CCNNNNNNNGG 6 cut(s) 88, 1235, 1458, 2021, 2337, 3148
Bse118I RCCGGY 2 cut(s) 623, 3233
Bse1I ACTGG 6 cut(s) 261, 1582, 1690, 3004, 3068, 3257
Bse21I CCTNAGG 1 cut(s) 1296
Bse8I GATNNNNATC 2 cut(s) 1033, 2514
BseBI CCWGG 5 cut(s) 83, 441, 1593, 2156, 2606
BseDI CCNNGG 9 cut(s) 553, 659, 1881, 1908, 2221, 2550, 2575, 2605, 3143
BseJI GATNNNNATC 2 cut(s) 1033, 2514
BseLI CCNNNNNNNGG 6 cut(s) 88, 1235, 1458, 2021, 2337, 3148
BseNI ACTGG 6 cut(s) 261, 1582, 1690, 3004, 3068, 3257
BseRI GAGGAG 2 cut(s) 699, 976
BseSI GKGCMC 2 cut(s) 69, 3112
BseYI CCCAGC 3 cut(s) 60, 502, 2043
BsgI GTGCAG 2 cut(s) 2748, 3060
Bsh1236I CGCG 1 cut(s) 3014
BshFI GGCC 8 cut(s) 245, 1475, 1591, 1596, 1947, 2220, 3097, 3233
BshNI GGYRCC 1 cut(s) 14
BshTI ACCGGT 1 cut(s) 623
BsiHKAI GWGCWC 4 cut(s) 69, 1263, 2062, 3112
BsiHKCI CYCGRG 4 cut(s) 978, 2305, 2575, 3142
BslFI GGGAC 3 cut(s) 107, 582, 2219
BslI CCNNNNNNNGG 6 cut(s) 88, 1235, 1458, 2021, 2337, 3148
BsmAI GTCTC 4 cut(s) 10, 563, 958, 2620
BsmFI GGGAC 3 cut(s) 107, 582, 2219
BsmI GAATGC 3 cut(s) 285, 768, 3308
BsnI GGCC 8 cut(s) 245, 1475, 1591, 1596, 1947, 2220, 3097, 3233
Bso31I GGTCTC 2 cut(s) 10, 563
BsoBI CYCGRG 4 cut(s) 978, 2305, 2575, 3142
Bsp119I TTCGAA 1 cut(s) 3030
Bsp1286I GDGCHC 4 cut(s) 69, 1263, 2062, 3112
Bsp1407I TGTACA 1 cut(s) 323
Bsp1720I GCTNAGC 1 cut(s) 1425
Bsp19I CCATGG 1 cut(s) 553
BspACI CCGC 8 cut(s) 417, 783, 855, 1597, 2566, 2733, 2780, 3216
BspANI GGCC 8 cut(s) 245, 1475, 1591, 1596, 1947, 2220, 3097, 3233
BspFNI CGCG 1 cut(s) 3014
BspHI TCATGA 1 cut(s) 2317
BspLI GGNNCC 8 cut(s) 16, 222, 1251, 1617, 1906, 1989, 2683, 2695
BspMAI CTGCAG 2 cut(s) 175, 797
BspMI ACCTGC 2 cut(s) 463, 1055
BspPI GGATC 6 cut(s) 748, 1330, 2234, 2517, 2688, 2701
BspT104I TTCGAA 1 cut(s) 3030
BspT107I GGYRCC 1 cut(s) 14
BspTI CTTAAG 2 cut(s) 388, 1124
BspTNI GGTCTC 2 cut(s) 10, 563
BsrFI RCCGGY 2 cut(s) 623, 3233
BsrGI TGTACA 1 cut(s) 323
BsrI ACTGG 6 cut(s) 261, 1582, 1690, 3004, 3068, 3257
BssAI RCCGGY 2 cut(s) 623, 3233
BssECI CCNNGG 9 cut(s) 553, 659, 1881, 1908, 2221, 2550, 2575, 2605, 3143
BssNI GRCGYC 1 cut(s) 15
BssSI CACGAG 1 cut(s) 2984
BssT1I CCWWGG 5 cut(s) 553, 1881, 1908, 2221, 2550
Bst2BI CACGAG 1 cut(s) 2984
Bst2UI CCWGG 5 cut(s) 83, 441, 1593, 2156, 2606
Bst6I CTCTTC 2 cut(s) 1785, 2044
BstACI GRCGYC 1 cut(s) 15
BstAFI CTTAAG 2 cut(s) 388, 1124
BstAPI GCANNNNNTGC 1 cut(s) 1273
BstAUI TGTACA 1 cut(s) 323
BstBAI YACGTR 2 cut(s) 1091, 1901
BstBI TTCGAA 1 cut(s) 3030
BstDSI CCRYGG 1 cut(s) 553
BstEII GGTNACC 1 cut(s) 3322
BstFNI CGCG 1 cut(s) 3014
BstH2I RGCGCY 3 cut(s) 18, 2037, 2832
BstHHI GCGC 3 cut(s) 17, 2036, 2831
BstMAI GTCTC 4 cut(s) 10, 563, 958, 2620
BstMWI GCNNNNNNNGC 4 cut(s) 998, 1273, 1664, 3158
BstNI CCWGG 5 cut(s) 83, 441, 1593, 2156, 2606
BstNSI RCATGY 3 cut(s) 567, 875, 1064
BstPI GGTNACC 1 cut(s) 3322
BstSFI CTRYAG 4 cut(s) 171, 793, 2588, 2904
BstSLI GKGCMC 2 cut(s) 69, 3112
BstUI CGCG 1 cut(s) 3014
BstV2I GAAGAC 1 cut(s) 1296
BstX2I RGATCY 5 cut(s) 1199, 1322, 2509, 2693, 2945
BstYI RGATCY 5 cut(s) 1199, 1322, 2509, 2693, 2945
Bsu36I CCTNAGG 1 cut(s) 1296
BsuI GTATCC 2 cut(s) 1324, 2863
BsuRI GGCC 8 cut(s) 245, 1475, 1591, 1596, 1947, 2220, 3097, 3233
BtgI CCRYGG 1 cut(s) 553
BtsI GCAGTG 3 cut(s) 168, 460, 1602
BtsIMutI CAGTG 5 cut(s) 168, 268, 460, 1602, 1813
BveI ACCTGC 2 cut(s) 463, 1055
CaiI CAGNNNCTG 2 cut(s) 210, 1628
CciI TCATGA 1 cut(s) 2317
CfoI GCGC 3 cut(s) 17, 2036, 2831
Cfr10I RCCGGY 2 cut(s) 623, 3233
Cfr13I GGNCC 6 cut(s) 220, 461, 1444, 1616, 2186, 3058
Cfr9I CCCGGG 1 cut(s) 2575
CseI GACGC 1 cut(s) 162
CspAI ACCGGT 1 cut(s) 623
DinI GGCGCC 1 cut(s) 16
DraIII CACNNNGTG 1 cut(s) 73
EaeI YGGCCR 3 cut(s) 1473, 1594, 3095
Eam1104I CTCTTC 2 cut(s) 1785, 2044
EarI CTCTTC 2 cut(s) 1785, 2044
Ecl136II GAGCTC 1 cut(s) 1261
Eco130I CCWWGG 5 cut(s) 553, 1881, 1908, 2221, 2550
Eco147I AGGCCT 3 cut(s) 245, 1591, 2220
Eco24I GRGCYC 1 cut(s) 1263
Eco31I GGTCTC 2 cut(s) 10, 563
Eco32I GATATC 1 cut(s) 573
Eco47I GGWCC 6 cut(s) 220, 461, 1444, 1616, 2186, 3058
Eco47III AGCGCT 1 cut(s) 2830
Eco53kI GAGCTC 1 cut(s) 1261
Eco57I CTGAAG 3 cut(s) 1874, 2817, 3248
Eco81I CCTNAGG 1 cut(s) 1296
Eco88I CYCGRG 4 cut(s) 978, 2305, 2575, 3142
Eco91I GGTNACC 1 cut(s) 3322
EcoICRI GAGCTC 1 cut(s) 1261
EcoO109I RGGNCCY 2 cut(s) 220, 1444
EcoO65I GGTNACC 1 cut(s) 3322
EcoRII CCWGG 5 cut(s) 81, 439, 1591, 2154, 2604
EcoRV GATATC 1 cut(s) 573
EcoT14I CCWWGG 5 cut(s) 553, 1881, 1908, 2221, 2550
EcoT22I ATGCAT 2 cut(s) 569, 877
EcoT38I GRGCYC 1 cut(s) 1263
EgeI GGCGCC 1 cut(s) 16
EheI GGCGCC 1 cut(s) 16
ErhI CCWWGG 5 cut(s) 553, 1881, 1908, 2221, 2550
FalI AAGNNNNNCTT 6 cut(s) 332, 364, 757, 789, 2154, 2186
FaqI GGGAC 3 cut(s) 107, 582, 2219
FauI CCCGC 1 cut(s) 776
FauNDI CATATG 1 cut(s) 877
FbaI TGATCA 1 cut(s) 2895
FriOI GRGCYC 1 cut(s) 1263
FspBI CTAG 9 cut(s) 507, 954, 1152, 1203, 1655, 2027, 2115, 2801, 2949
GlaI GCGC 3 cut(s) 16, 2035, 2830
GsaI CCCAGC 3 cut(s) 64, 506, 2047
GsuI CTGGAG 5 cut(s) 244, 1962, 2238, 2700, 3213
HaeII RGCGCY 3 cut(s) 18, 2037, 2832
HaeIII GGCC 8 cut(s) 245, 1475, 1591, 1596, 1947, 2220, 3097, 3233
HgaI GACGC 1 cut(s) 162
HhaI GCGC 3 cut(s) 17, 2036, 2831
Hin1I GRCGYC 1 cut(s) 15
Hin6I GCGC 3 cut(s) 15, 2034, 2829
HinP1I GCGC 3 cut(s) 15, 2034, 2829
HincII GTYRAC 3 cut(s) 478, 1406, 2248
HindII GTYRAC 3 cut(s) 478, 1406, 2248
HinfI GANTC 9 cut(s) 511, 966, 1795, 1877, 2244, 2314, 2571, 3079, 3256
HphI GGTGA 4 cut(s) 940, 2099, 2459, 3334
Hpy99I CGWCG 2 cut(s) 318, 3058
HpyCH4IV ACGT 6 cut(s) 316, 1090, 1640, 1900, 1957, 2706
HpyF10VI GCNNNNNNNGC 4 cut(s) 998, 1273, 1664, 3158
HpySE526I ACGT 6 cut(s) 316, 1090, 1640, 1900, 1957, 2706
Hsp92I GRCGYC 1 cut(s) 15
HspAI GCGC 3 cut(s) 15, 2034, 2829
KasI GGCGCC 1 cut(s) 14
KroI GCCGGC 1 cut(s) 3233
KroNI GCCGGC 1 cut(s) 3235
Ksp22I TGATCA 1 cut(s) 2895
LmnI GCTCC 2 cut(s) 686, 2681
LweI GCATC 6 cut(s) 165, 1567, 1608, 1664, 2331, 2524
MaeI CTAG 9 cut(s) 507, 954, 1152, 1203, 1655, 2027, 2115, 2801, 2949
MaeII ACGT 6 cut(s) 316, 1090, 1640, 1900, 1957, 2706
MaeIII GTNAC 6 cut(s) 166, 1573, 2735, 2995, 3166, 3322
MboII GAAGA 9 cut(s) 116, 1298, 1301, 1375, 1802, 2031, 2433, 3056, 3130
MfeI CAATTG 2 cut(s) 928, 1668
MflI RGATCY 5 cut(s) 1199, 1322, 2509, 2693, 2945
MhlI GDGCHC 4 cut(s) 69, 1263, 2062, 3112
MlsI TGGCCA 1 cut(s) 1475
MluI ACGCGT 1 cut(s) 3012
MluNI TGGCCA 1 cut(s) 1475
Mly113I GGCGCC 1 cut(s) 15
MlyI GAGTC 6 cut(s) 505, 960, 1886, 2253, 2323, 3073
MmeI TCCRAC 1 cut(s) 1894
Mox20I TGGCCA 1 cut(s) 1475
Mph1103I ATGCAT 2 cut(s) 569, 877
MroNI GCCGGC 1 cut(s) 3233
MroXI GAANNNNTTC 1 cut(s) 802
MscI TGGCCA 1 cut(s) 1475
MseI TTAA 7 cut(s) 249, 275, 389, 1125, 1467, 1691, 2886
MslI CAYNNNNRTG 5 cut(s) 566, 678, 876, 1065, 2096
Msp20I TGGCCA 1 cut(s) 1475
MspA1I CMGCKG 2 cut(s) 737, 1429
MspCI CTTAAG 2 cut(s) 388, 1124
MunI CAATTG 2 cut(s) 928, 1668
Mva1269I GAATGC 3 cut(s) 285, 768, 3308
MvaI CCWGG 5 cut(s) 83, 441, 1593, 2156, 2606
MvnI CGCG 1 cut(s) 3014
MwoI GCNNNNNNNGC 4 cut(s) 998, 1273, 1664, 3158
NaeI GCCGGC 1 cut(s) 3235
NarI GGCGCC 1 cut(s) 15
NciI CCSGG 5 cut(s) 116, 224, 660, 2576, 2577
NcoI CCATGG 1 cut(s) 553
NdeI CATATG 1 cut(s) 877
NgoMIV GCCGGC 1 cut(s) 3233
NlaIV GGNNCC 8 cut(s) 16, 222, 1251, 1617, 1906, 1989, 2683, 2695
NmeAIII GCCGAG 1 cut(s) 209
NmuCI GTSAC 3 cut(s) 166, 3166, 3322
NsiI ATGCAT 2 cut(s) 569, 877
NspI RCATGY 3 cut(s) 567, 875, 1064
NspV TTCGAA 1 cut(s) 3030
PaeI GCATGC 2 cut(s) 875, 1064
PagI TCATGA 1 cut(s) 2317
PaqCI CACCTGC 1 cut(s) 1055
PceI AGGCCT 3 cut(s) 245, 1591, 2220
PcsI WCGNNNNNNNCGW 1 cut(s) 2638
PctI GAATGC 3 cut(s) 285, 768, 3308
PdiI GCCGGC 1 cut(s) 3235
PdmI GAANNNNTTC 1 cut(s) 802
PfeI GAWTC 3 cut(s) 1795, 2571, 3256
PflFI GACNNNGTC 1 cut(s) 2243
PflMI CCANNNNNTGG 2 cut(s) 88, 2337
PinAI ACCGGT 1 cut(s) 623
PleI GAGTC 6 cut(s) 505, 960, 1885, 2252, 2322, 3073
PluTI GGCGCC 1 cut(s) 18
PpsI GAGTC 6 cut(s) 505, 960, 1885, 2252, 2322, 3073
Ppu21I YACGTR 2 cut(s) 1091, 1901
PpuMI RGGWCCY 2 cut(s) 220, 1444
Psp124BI GAGCTC 1 cut(s) 1263
Psp1406I AACGTT 1 cut(s) 1640
Psp5II RGGWCCY 2 cut(s) 220, 1444
Psp6I CCWGG 5 cut(s) 81, 439, 1591, 2154, 2604
PspEI GGTNACC 1 cut(s) 3322
PspFI CCCAGC 3 cut(s) 60, 502, 2043
PspGI CCWGG 5 cut(s) 81, 439, 1591, 2154, 2604
PspN4I GGNNCC 8 cut(s) 16, 222, 1251, 1617, 1906, 1989, 2683, 2695
PspPI GGNCC 6 cut(s) 220, 461, 1444, 1616, 2186, 3058
PspPPI RGGWCCY 2 cut(s) 220, 1444
PstI CTGCAG 2 cut(s) 175, 797
PstNI CAGNNNCTG 2 cut(s) 210, 1628
PsuI RGATCY 5 cut(s) 1199, 1322, 2509, 2693, 2945
PsyI GACNNNGTC 1 cut(s) 2243
PvuII CAGCTG 2 cut(s) 737, 1429
RseI CAYNNNNRTG 5 cut(s) 566, 678, 876, 1065, 2096
SacI GAGCTC 1 cut(s) 1263
SaqAI TTAA 7 cut(s) 249, 275, 389, 1125, 1467, 1691, 2886
Sau96I GGNCC 6 cut(s) 220, 461, 1444, 1616, 2186, 3058
ScaI AGTACT 2 cut(s) 907, 2503
SchI GAGTC 6 cut(s) 505, 960, 1886, 2253, 2323, 3073
SduI GDGCHC 4 cut(s) 69, 1263, 2062, 3112
SfaNI GCATC 6 cut(s) 165, 1567, 1608, 1664, 2331, 2524
SfcI CTRYAG 4 cut(s) 171, 793, 2588, 2904
SfoI GGCGCC 1 cut(s) 16
SfuI TTCGAA 1 cut(s) 3030
SinI GGWCC 6 cut(s) 220, 461, 1444, 1616, 2186, 3058
SmaI CCCGGG 1 cut(s) 2577
SmiMI CAYNNNNRTG 5 cut(s) 566, 678, 876, 1065, 2096
SmlI CTYRAG 4 cut(s) 388, 1124, 1133, 1409
SmoI CTYRAG 4 cut(s) 388, 1124, 1133, 1409
SphI GCATGC 2 cut(s) 875, 1064
SseBI AGGCCT 3 cut(s) 245, 1591, 2220
SsiI CCGC 8 cut(s) 417, 783, 855, 1597, 2566, 2733, 2780, 3216
SspDI GGCGCC 1 cut(s) 14
SspI AATATT 2 cut(s) 726, 3024
SspMI CTAG 9 cut(s) 507, 954, 1152, 1203, 1655, 2027, 2115, 2801, 2949
SstI GAGCTC 1 cut(s) 1263
StuI AGGCCT 3 cut(s) 245, 1591, 2220
StyI CCWWGG 5 cut(s) 553, 1881, 1908, 2221, 2550
TaiI ACGT 6 cut(s) 319, 1093, 1643, 1903, 1960, 2709
TaqI TCGA 3 cut(s) 1102, 1178, 3030
TaqII GACCGA 3 cut(s) 409, 2256, 3046
TatI WGTACW 5 cut(s) 323, 905, 1437, 2501, 2592
TauI GCSGC 2 cut(s) 1599, 2783
TfiI GAWTC 3 cut(s) 1795, 2571, 3256
Tru1I TTAA 7 cut(s) 249, 275, 389, 1125, 1467, 1691, 2886
Tru9I TTAA 7 cut(s) 249, 275, 389, 1125, 1467, 1691, 2886
TscAI CASTG 5 cut(s) 175, 268, 460, 1609, 1813
TseFI GTSAC 3 cut(s) 166, 3166, 3322
Tsp45I GTSAC 3 cut(s) 166, 3166, 3322
TspDTI ATGAA 8 cut(s) 353, 1320, 2025, 2254, 2336, 2430, 3131, 3236
TspGWI ACGGA 3 cut(s) 165, 1719, 2309
TspMI CCCGGG 1 cut(s) 2575
TspRI CASTG 5 cut(s) 175, 268, 460, 1609, 1813
Tth111I GACNNNGTC 1 cut(s) 2243
Van91I CCANNNNNTGG 2 cut(s) 88, 2337
Vha464I CTTAAG 2 cut(s) 388, 1124
VneI GTGCAC 2 cut(s) 65, 3108
VpaK11BI GGWCC 6 cut(s) 220, 461, 1444, 1616, 2186, 3058
XapI RAATTY 7 cut(s) 487, 691, 1383, 1935, 2419, 2437, 3121
XbaI TCTAGA 3 cut(s) 1151, 2026, 2800
XceI RCATGY 3 cut(s) 567, 875, 1064
XmaI CCCGGG 1 cut(s) 2575
XmnI GAANNNNTTC 1 cut(s) 802
XspI CTAG 9 cut(s) 507, 954, 1152, 1203, 1655, 2027, 2115, 2801, 2949
ZrmI AGTACT 2 cut(s) 907, 2503
Zsp2I ATGCAT 2 cut(s) 569, 877
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.