Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0001624

Physical Location & Seq

Genomic Coordinates Reverse (-)

55797665 .. 55804016

Gene Structure 6352 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G034030.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3336 bp

ATGGTGTCAGCAGCCTGTGACATCAACCCTACACAAAGGCCGCCTCATTCACTGCTCTCAAAGCCTCCTGCACATTTGTCTCACTTACTGGCTATTTTGGCTTTGATCTTGGCACATTGGCTTCACTTTGTGCAGGGACAAGACTTATATGACTTTGACCAAATTGACGACCCTACTGTTCTCCCACTCATCACACAGATTGTGTATGGCCGCATCTCCAATGCCACAGCAATTCTCAGTCGGGATCTTAGCAACCATTCCAGCTTCTGTGTTAAAGACCCGGAAGCTGATTGGGACCAGGCATTTAACTTTTCGTCGAATCTGGATTTCTTAATTTCATGCATTCAAAAGACGAAAGGAGATATTACACAGCGTTTGTGTACAGCAGCAGAGATGAAATTCTACTTTGAAAGTTTATTTGAAAAATCTGAGAGAGAAAATTACTTGAAGCCTAACAAAAATTGTAATTTTACCTCATGGATTTCGGGGTGTGAGCCTGGATGGGCTTGTAGCAGTGGCCAGAATCAGCATGTTGACCTTCAAAATTCAGACAGCATTCTTGCAAGAACTCACAACTGCCAGCCTTGTTGTGACGGTTTCTTCTGTCCACACGGTCTTACTTGCATGATACCTTGTCCATCGGGTTCTTATTGTCCCCTGGCAACACTGGACAAAACGACTGGTGTTTGTGAACCATACAAATACCAACTACCTCCAGGGAAACCAAACCATACTTGTGGAGGAGCAAACATATGGGCTGATGTTGGTACTACTAGTGAAGTATTCTGTCCAGTTGGATCATATTGTCCAACAACTGTTAAAAAAATTCCTTGTAGTAGTGGACACTACTGCAAGATGGGTTCTACCTCTGAGAAACGCTGTTTTAGGCTGTCTTCATGTAATCAAAGCACTCCAAGTCAAAGCAGTTATGTATACGGAATAATGCTTATTGCAGCTCTAAGTACTCTTCTACTTATTGTTTACAATTTTTCCTACCAAGTTCTCACCACTAGGAACAGGACACTGGCCAAATCCCGGGAGGCGGCAGCAAAATATGCAAGTAAGATAGCAATGTCACGCCAAAGATGGAAGTCTGCTACAGACGCTGCTAAGAATTTTGCAAGTGGATTGCCAGCTCATTTATCACCCAAGTTTTCTCGAAAAAAGGACATCCCAGGTGCACCTCTGCATCCAAGTGCATTCTCTGCTGCTTTGTTCTCATCTATGGCATCTAAAGGAAAGCAAGAGGAGTCTAGTGAGCTCATCCAGATGAGCGACACGGAAGACAATCCAGAGAGTTTCGAAGGTTTTATATTTGGACCTGAGGATACAATTGTAGGAAATGTGTCAAGAGGAAAAGTAACACGTACTCATGACCAGATATTCAAGTATGCTTATACTCAACTTGAGAAAGAGAAGGCTCTGCAGCAAGACTACAAGGACCTTACCTTACCTGGGGTGGTTAAAATGGCCAATAATATTCAGACAAGGAAAAGGCCTCTGATGGAGATTTATTTTAAAGACCTTGCACTTACTTTGAAAGCGCAAAATAAACATATACTGAGATGTGTAACTGGTAAAATAAAGCCTGGCTGCATTACTGCAGTCATGGGTCCGTCAGGTGCTGGAAAAACAACATTTATTTCTGCTCTAGCTGGAAAAGCAATTGGATGCAAGGTGACTGGTCGAATTCTTATAAATGGAAAGAATGAATCAATCCATTCGTATAAAAGAATCCTAGGTTTTGTGCCGCAAGATGATATTGTGCACGGAAACTTGACAGTGGAAGAGAATTTGTGGTTCAGTGCAAAGTGCAGATTGTCAGCGGACTTATCAAAAGCAGATGAATTCCTAGTGACTGAAAGAGTTATCGAGTCCTTGGGCCTTCAGACAGTACGCAATTCCTTGGTTGGAACTCTAGAGAAGCGAGGAATTTCTGGAGGACAGAGGAAACGTGTGAATGTTGGCGTGGAAATGGTTATGGAACCTTCACTTTTGATTTTGGATGAACCCACATCAGGGTTAGACAGTGCCTCTTCTCAGCTACTTCTTAGAGCACTTAGACGGGAAGCTTTTGAAGGGGTAAACATTTGCATGGTGGTTCACCAACCTAGTTATGCATTATTCAAGATGTTTGATGATCTGGTACTCCTGGCAAAAGGAGGCCTTACTGTCTATCATGGATCAGCAGAGAAAGTTGAAGAATACTTTGCAGGCCTTGGGATCAATGTCCCAGACCGGATCAATCCTCCGGACTACTTCATTGACATTTTGGAGGGAATAGTAACAACAGAACGCAGCTCAAGTGTATACTATAGAGAGCTTCCTATAAGATGGATGCTTCATAAGGGATACTCAGTACCCCCTGATATGTTGCATGGTACTGCTGGACTTGCATTGTCCTCAACCGGTGGAAATTCAATTGATGAAACAAATATTGCTGCTGCTGAAATGGAGGAACCGTCTTTTTCAGCAAGTCTATGGAAATACATAAAAACTAATATGGAATTGCATTGTGATTCAATATGGCTCAATTTCTTGAAATCCAATGATTTATCAAACCGCAGAACTCCAGGAGTACTTCAGCAATACAGATACTTCCTCTGCAGAGTCAGTAAGCAGAGACTTCGAGAAGCTCGAATACAAGCAGTGGATTATCTGATTTTATTACTTGCTGGAGCCTGCTTAGGATCACTTGCTAAAGTGAGCGACCGTAATTTTGGAGCACTTGGTTACACATATACCGTTATTGCAGTTTCTCTACTGTGCAAAATTGCGGCTTTGAGATCGTTTTCTCTGGACAGATTACACTATTGGAGAGAAGCTGCATCTGGAATGAGCAGCTTGGCTTATTTTCTCGCTAAGGATACGGTTGATCATTTTAATACAGTGATCAAACCTTTGGTGTATCTGTCCATGTTCTACTTTTTCACCGACCCAAGATCTAGCTTAGCAGATAATTACATTGTTCTACTCTGCCTTGTGTACTGCGTAACTGGTATAGCCTATGCATTAGCAATCTTCTTTGACCAAGGTGCAGCCCAACTGTTATCAGTCCTTCTTCCTGTTGTTTTGACTCTTACAGCAACACAGCCTCAGGATAGTGAAATTCTAAAGATTTTGACCAATTTATGCTATCCTAAGTGGGCTTTGGAGGCATTTGTGATTGCAAATGCTGAAAGCTACTCAGGGGTATGGCTAATAACTCGTTGCGGGACGCTTTTGAAAAGTGGCTATGATCTTCATGATTGGAATCTTTGTATAACTGTCTTGATCATCACTGGTTTAGTTAGTCGTGTGATCGCATTCTTTTGTATGCTGATCTTTCAGAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0008150 GO:0015399 GO:0015405 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0031224 GO:0042623 GO:0042626 GO:0043492 GO:0044425 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC_tran

Protein Analysis

1111

Amino Acids

123.1

Weight (kDa)

8.3

Isoelectric Point (pI)

39.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	524 - 673	3.4e-23	ABC transporter
ABC2_membrane_7	PF19055	702 - 1111	1.3e-219	ABC-2 type transporter
ABC2_membrane	PF01061	862 - 1056	3e-08	ABC-2 type transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001624)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53390
fragaria_vesca	FvH4_6g32451 FvH4_7g18960 FvH4_7g18960
malus_domestica	MD00G1214200.v1.1
prunus_persica	Prupe.2G210600_v2.0.a1 Prupe.2G210600_v2.0.a1 Prupe.2G210600_v2.0.a1
pyrus_communis	pycom01g13180 pycom01g13190 pycom07g16600
rosa_chinensis	RchiOBHm_Chr1g0360271 RchiOBHm_Chr1g0362891 RchiOBHm_Chr2g0140691 RchiOBHm_Chr2g0140701
rosa_laevigata	RLG00000003015 RLG00000019892 RLG00000019893 RLG00000027614
rosa_multiflora	Rmu_co8315067.1_g000001 Rmu_sc0001502.1_g000011 Rmu_sc0003342.1_g000012 Rmu_sc0003342.1_g000013
rosa_roxburghii	Rroxscaffold_1G00043370 Rroxscaffold_2G00104570 Rroxscaffold_2G00104580 Rroxscaffold_3G00227580 Rroxscaffold_4G00293670 Rroxscaffold_5G00347780 Rroxscaffold_5G00347800
rosa_rugosa	Rorug01G0302100 Rorug02G0364100 Rorug02G0364100 Rorug03G0261700
rosa_samantha	Rh1AG185000 Rh1AG311300 Rh1BG274400 Rh1DG305200 Rh2AG327100 Rh2AG415900 Rh2BG425300 Rh2BG425400 Rh2DG435400 Rh4AG110400 Rh6DG223100 Rh7BG077900
rosa_wichuraiana	Rw1G027590 Rw2G034020 Rw2G034030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1697
AccI	GTMKAC	2 cut(s)	933, 2310
AccIII	TCCGGA	1 cut(s)	2251
AciI	CCGC	8 cut(s)	41, 211, 1043, 1751, 1826, 2563, 2777, 3213
AclWI	GGATC	6 cut(s)	252, 805, 2191, 2231, 2249, 2698
AcoI	YGGCCR	4 cut(s)	208, 517, 1026, 1470
AcuI	CTGAAG	2 cut(s)	1871, 2567
AdeI	CACNNNGTG	1 cut(s)	130
AfiI	CCNNNNNNNGG	5 cut(s)	1035, 1042, 1455, 2018, 2019
AflIII	ACRYGT	2 cut(s)	1364, 1954
AgeI	ACCGGT	1 cut(s)	2408
AhlI	ACTAGT	1 cut(s)	773
AjnI	CCWGG	9 cut(s)	297, 496, 657, 715, 1174, 1453, 1588, 2151, 2572
Alw21I	GWGCWC	5 cut(s)	1183, 1263, 1770, 2059, 2728
Alw26I	GTCTC	2 cut(s)	84, 2617
Alw44I	GTGCAC	2 cut(s)	1179, 1766
AlwI	GGATC	6 cut(s)	252, 805, 2191, 2231, 2249, 2698
AlwNI	CAGNNNCTG	3 cut(s)	267, 1106, 1625
Ama87I	CYCGRG	1 cut(s)	1035
Aor13HI	TCCGGA	1 cut(s)	2251
AoxI	GGCC	9 cut(s)	38, 208, 517, 1026, 1470, 1496, 1882, 2164, 2215
ApaLI	GTGCAC	2 cut(s)	1179, 1766
ArsI	GACNNNNNNTTYG	2 cut(s)	2702, 2734
AsiGI	ACCGGT	1 cut(s)	2408
AspA2I	CCTAGG	1 cut(s)	1738
AspLEI	GCGC	1 cut(s)	1546
AspS9I	GGNCC	5 cut(s)	295, 1319, 1441, 1613, 1882
AsuC2I	CCSGG	3 cut(s)	281, 1036, 1037
AsuHPI	GGTGA	5 cut(s)	997, 1137, 1690, 2096, 2923
AsuII	TTCGAA	1 cut(s)	1302
AvaI	CYCGRG	1 cut(s)	1035
AvaII	GGWCC	4 cut(s)	295, 1319, 1441, 1613
AvrII	CCTAGG	1 cut(s)	1738
AxyI	CCTNAGG	2 cut(s)	1323, 3096
BaeGI	GKGCMC	2 cut(s)	1183, 1770
BaeI	ACNNNNGTAYC	2 cut(s)	1320, 1353
BalI	TGGCCA	3 cut(s)	519, 1028, 1472
BanII	GRGCYC	1 cut(s)	1263
BarI	GAAGNNNNNNTAC	2 cut(s)	2625, 2657
BbsI	GAAGAC	2 cut(s)	885, 1290
Bbv12I	GWGCWC	5 cut(s)	1183, 1263, 1770, 2059, 2728
BccI	CCATC	6 cut(s)	495, 646, 850, 1080, 1498, 2328
BcgI	CGANNNNNNTGC	2 cut(s)	2609, 2643
BciT130I	CCWGG	9 cut(s)	299, 498, 659, 717, 1176, 1455, 1590, 2153, 2574
BciVI	GTATCC	3 cut(s)	1321, 2345, 2860
BclI	TGATCA	3 cut(s)	2875, 2892, 3273
BcnI	CCSGG	3 cut(s)	281, 1036, 1037
BcoDI	GTCTC	2 cut(s)	84, 2617
BcuI	ACTAGT	1 cut(s)	773
BfaI	CTAG	9 cut(s)	774, 1011, 1254, 1652, 1739, 1853, 1919, 2112, 2946
BfmI	CTRYAG	5 cut(s)	1098, 1424, 1602, 2314, 2605
BfuI	GTATCC	3 cut(s)	1321, 2345, 2860
BglII	AGATCT	1 cut(s)	2942
BlnI	CCTAGG	1 cut(s)	1738
BlpI	GCTNAGC	1 cut(s)	2950
BmcAI	AGTACT	2 cut(s)	964, 2580
Bme18I	GGWCC	4 cut(s)	295, 1319, 1441, 1613
BmeT110I	CYCGRG	1 cut(s)	1035
BmgT120I	GGNCC	5 cut(s)	295, 1319, 1441, 1613, 1882
BmiI	GGNNCC	5 cut(s)	296, 1614, 1986, 2460, 2680
BmsI	GCATC	6 cut(s)	222, 1198, 1238, 1661, 2328, 2837
BpiI	GAAGAC	2 cut(s)	885, 1290
BpmI	CTGGAG	4 cut(s)	699, 1959, 2556, 2697
Bpu10I	CCTNAGC	2 cut(s)	2686, 2862
Bpu1102I	GCTNAGC	1 cut(s)	2950
Bpu14I	TTCGAA	1 cut(s)	1302
BpuEI	CTTGAG	2 cut(s)	1427, 2287
BpuMI	CCSGG	3 cut(s)	281, 1036, 1037
BsaAI	YACGTR	1 cut(s)	1367
BsaBI	GATNNNNATC	1 cut(s)	3252
BsaWI	WCCGGW	3 cut(s)	2238, 2251, 2408
BsaXI	ACNNNNNCTCC	2 cut(s)	2447, 2477
Bsc4I	CCNNNNNNNGG	5 cut(s)	1035, 1042, 1455, 2018, 2019
Bse118I	RCCGGY	1 cut(s)	2408
Bse1I	ACTGG	9 cut(s)	93, 672, 685, 791, 1029, 1579, 1687, 3001, 3286
Bse21I	CCTNAGG	2 cut(s)	1323, 3096
Bse3DI	GCAATG	1 cut(s)	1077
Bse8I	GATNNNNATC	1 cut(s)	3252
BseAI	TCCGGA	1 cut(s)	2251
BseBI	CCWGG	9 cut(s)	299, 498, 659, 717, 1176, 1455, 1590, 2153, 2574
BseGI	GGATG	7 cut(s)	506, 1170, 1189, 1263, 1676, 2011, 2343
BseJI	GATNNNNATC	1 cut(s)	3252
BseLI	CCNNNNNNNGG	5 cut(s)	1035, 1042, 1455, 2018, 2019
BseMI	GCAATG	1 cut(s)	1077
BseMII	CTCAG	9 cut(s)	250, 420, 861, 1314, 1553, 2054, 2370, 3110, 3201
BseNI	ACTGG	9 cut(s)	93, 672, 685, 791, 1029, 1579, 1687, 3001, 3286
BseRI	GAGGAG	2 cut(s)	756, 1262
BseSI	GKGCMC	2 cut(s)	1183, 1770
BsgI	GTGCAG	4 cut(s)	54, 152, 1834, 3057
Bsh1285I	CGRYCG	1 cut(s)	2713
BshFI	GGCC	9 cut(s)	40, 210, 519, 1028, 1472, 1498, 1884, 2166, 2217
BshTI	ACCGGT	1 cut(s)	2408
BsiEI	CGRYCG	1 cut(s)	2713
BsiHKAI	GWGCWC	5 cut(s)	1183, 1263, 1770, 2059, 2728
BsiHKCI	CYCGRG	1 cut(s)	1035
BsiSI	CCGG	5 cut(s)	281, 1036, 2239, 2252, 2409
BslFI	GGGAC	5 cut(s)	150, 308, 639, 2216, 3229
BslI	CCNNNNNNNGG	5 cut(s)	1035, 1042, 1455, 2018, 2019
BsmAI	GTCTC	2 cut(s)	84, 2617
BsmFI	GGGAC	5 cut(s)	150, 308, 639, 2216, 3229
BsmI	GAATGC	4 cut(s)	342, 555, 1199, 3305
BsnI	GGCC	9 cut(s)	40, 210, 519, 1028, 1472, 1498, 1884, 2166, 2217
BsoBI	CYCGRG	1 cut(s)	1035
Bsp119I	TTCGAA	1 cut(s)	1302
Bsp1286I	GDGCHC	5 cut(s)	1183, 1263, 1770, 2059, 2728
Bsp13I	TCCGGA	1 cut(s)	2251
Bsp1407I	TGTACA	1 cut(s)	380
Bsp1720I	GCTNAGC	1 cut(s)	2950
BspACI	CCGC	8 cut(s)	41, 211, 1043, 1751, 1826, 2563, 2777, 3213
BspANI	GGCC	9 cut(s)	40, 210, 519, 1028, 1472, 1498, 1884, 2166, 2217
BspCNI	CTCAG	9 cut(s)	249, 421, 862, 1315, 1554, 2053, 2369, 3109, 3200
BspEI	TCCGGA	1 cut(s)	2251
BspHI	TCATGA	2 cut(s)	1372, 3244
BspLI	GGNNCC	5 cut(s)	296, 1614, 1986, 2460, 2680
BspMAI	CTGCAG	3 cut(s)	1428, 1606, 2609
BspPI	GGATC	6 cut(s)	252, 805, 2191, 2231, 2249, 2698
BspT104I	TTCGAA	1 cut(s)	1302
BsrDI	GCAATG	1 cut(s)	1077
BsrFI	RCCGGY	1 cut(s)	2408
BsrGI	TGTACA	1 cut(s)	380
BsrI	ACTGG	9 cut(s)	93, 672, 685, 791, 1029, 1579, 1687, 3001, 3286
BssAI	RCCGGY	1 cut(s)	2408
BssNAI	GTATAC	2 cut(s)	934, 2311
BssT1I	CCWWGG	5 cut(s)	1738, 1878, 1905, 2218, 3031
Bst1107I	GTATAC	2 cut(s)	934, 2311
Bst2UI	CCWGG	9 cut(s)	299, 498, 659, 717, 1176, 1455, 1590, 2153, 2574
Bst6I	CTCTTC	3 cut(s)	972, 1782, 2041
BstAPI	GCANNNNNTGC	2 cut(s)	1055, 1205
BstAUI	TGTACA	1 cut(s)	380
BstBAI	YACGTR	1 cut(s)	1367
BstBI	TTCGAA	1 cut(s)	1302
BstC8I	GCNNGC	4 cut(s)	581, 1134, 2215, 2683
BstF5I	GGATG	7 cut(s)	506, 1170, 1189, 1263, 1676, 2011, 2343
BstHHI	GCGC	1 cut(s)	1546
BstMAI	GTCTC	2 cut(s)	84, 2617
BstMCI	CGRYCG	1 cut(s)	2713
BstMWI	GCNNNNNNNGC	8 cut(s)	61, 98, 1055, 1103, 1205, 1661, 2393, 3155
BstNI	CCWGG	9 cut(s)	299, 498, 659, 717, 1176, 1455, 1590, 2153, 2574
BstNSI	RCATGY	1 cut(s)	533
BstSFI	CTRYAG	5 cut(s)	1098, 1424, 1602, 2314, 2605
BstSLI	GKGCMC	2 cut(s)	1183, 1770
BstV2I	GAAGAC	2 cut(s)	885, 1290
BstX2I	RGATCY	2 cut(s)	244, 2942
BstXI	CCANNNNNNTGG	1 cut(s)	737
BstYI	RGATCY	2 cut(s)	244, 2942
BstZ17I	GTATAC	2 cut(s)	934, 2311
Bsu36I	CCTNAGG	2 cut(s)	1323, 3096
BsuI	GTATCC	3 cut(s)	1321, 2345, 2860
BsuRI	GGCC	9 cut(s)	40, 210, 519, 1028, 1472, 1498, 1884, 2166, 2217
BtsCI	GGATG	7 cut(s)	506, 1170, 1189, 1263, 1676, 2011, 2343
BtsI	GCAGTG	3 cut(s)	50, 520, 2655
Cac8I	GCNNGC	4 cut(s)	581, 1134, 2215, 2683
CaiI	CAGNNNCTG	3 cut(s)	267, 1106, 1625
CciI	TCATGA	2 cut(s)	1372, 3244
CfoI	GCGC	1 cut(s)	1546
Cfr10I	RCCGGY	1 cut(s)	2408
Cfr13I	GGNCC	5 cut(s)	295, 1319, 1441, 1613, 1882
Cfr9I	CCCGGG	1 cut(s)	1035
CseI	GACGC	2 cut(s)	1112, 3226
CspAI	ACCGGT	1 cut(s)	2408
DraI	TTTAAA	1 cut(s)	1519
DraIII	CACNNNGTG	1 cut(s)	130
EaeI	YGGCCR	4 cut(s)	208, 517, 1026, 1470
Eam1104I	CTCTTC	3 cut(s)	972, 1782, 2041
EarI	CTCTTC	3 cut(s)	972, 1782, 2041
Ecl136II	GAGCTC	1 cut(s)	1261
Eco130I	CCWWGG	5 cut(s)	1738, 1878, 1905, 2218, 3031
Eco147I	AGGCCT	3 cut(s)	1498, 2166, 2217
Eco24I	GRGCYC	1 cut(s)	1263
Eco47I	GGWCC	4 cut(s)	295, 1319, 1441, 1613
Eco53kI	GAGCTC	1 cut(s)	1261
Eco57I	CTGAAG	2 cut(s)	1871, 2567
Eco81I	CCTNAGG	2 cut(s)	1323, 3096
Eco88I	CYCGRG	1 cut(s)	1035
EcoICRI	GAGCTC	1 cut(s)	1261
EcoO109I	RGGNCCY	1 cut(s)	1441
EcoRI	GAATTC	2 cut(s)	1689, 1847
EcoRII	CCWGG	9 cut(s)	297, 496, 657, 715, 1174, 1453, 1588, 2151, 2572
EcoT14I	CCWWGG	5 cut(s)	1738, 1878, 1905, 2218, 3031
EcoT22I	ATGCAT	3 cut(s)	344, 2122, 3013
EcoT38I	GRGCYC	1 cut(s)	1263
ErhI	CCWWGG	5 cut(s)	1738, 1878, 1905, 2218, 3031
FalI	AAGNNNNNCTT	2 cut(s)	2151, 2183
FaqI	GGGAC	5 cut(s)	150, 308, 639, 2216, 3229
FauI	CCCGC	1 cut(s)	3206
FauNDI	CATATG	1 cut(s)	752
FbaI	TGATCA	3 cut(s)	2875, 2892, 3273
FblI	GTMKAC	2 cut(s)	933, 2310
FokI	GGATG	7 cut(s)	513, 1157, 1176, 1250, 1683, 2018, 2350
FriOI	GRGCYC	1 cut(s)	1263
FspBI	CTAG	9 cut(s)	774, 1011, 1254, 1652, 1739, 1853, 1919, 2112, 2946
GlaI	GCGC	1 cut(s)	1545
GsuI	CTGGAG	4 cut(s)	699, 1959, 2556, 2697
HaeIII	GGCC	9 cut(s)	40, 210, 519, 1028, 1472, 1498, 1884, 2166, 2217
HapII	CCGG	5 cut(s)	281, 1036, 2239, 2252, 2409
HgaI	GACGC	2 cut(s)	1112, 3226
HhaI	GCGC	1 cut(s)	1546
Hin6I	GCGC	1 cut(s)	1544
HinP1I	GCGC	1 cut(s)	1544
HincII	GTYRAC	1 cut(s)	535
HindII	GTYRAC	1 cut(s)	535
HindIII	AAGCTT	1 cut(s)	2070
HpaII	CCGG	5 cut(s)	281, 1036, 2239, 2252, 2409
HphI	GGTGA	5 cut(s)	997, 1137, 1690, 2096, 2923
Hpy188I	TCNGA	8 cut(s)	430, 550, 871, 1485, 1503, 1890, 2661, 3330
Hpy99I	CGWCG	1 cut(s)	319
HpyAV	CCTTC	7 cut(s)	548, 1298, 1411, 1895, 1998, 2072, 3068
HpyCH4IV	ACGT	2 cut(s)	1366, 1954
HpyF10VI	GCNNNNNNNGC	8 cut(s)	61, 98, 1055, 1103, 1205, 1661, 2393, 3155
HpySE526I	ACGT	2 cut(s)	1366, 1954
HspAI	GCGC	1 cut(s)	1544
Kpn2I	TCCGGA	1 cut(s)	2251
Ksp22I	TGATCA	3 cut(s)	2875, 2892, 3273
LmnI	GCTCC	3 cut(s)	743, 2678, 2723
LweI	GCATC	6 cut(s)	222, 1198, 1238, 1661, 2328, 2837
MaeI	CTAG	9 cut(s)	774, 1011, 1254, 1652, 1739, 1853, 1919, 2112, 2946
MaeII	ACGT	2 cut(s)	1366, 1954
MfeI	CAATTG	3 cut(s)	1332, 1665, 2421
MflI	RGATCY	2 cut(s)	244, 2942
MhlI	GDGCHC	5 cut(s)	1183, 1263, 1770, 2059, 2728
MlsI	TGGCCA	3 cut(s)	519, 1028, 1472
MluNI	TGGCCA	3 cut(s)	519, 1028, 1472
MlyI	GAGTC	4 cut(s)	1259, 1883, 2619, 3070
MmeI	TCCRAC	3 cut(s)	775, 833, 1891
Mox20I	TGGCCA	3 cut(s)	519, 1028, 1472
Mph1103I	ATGCAT	3 cut(s)	344, 2122, 3013
MroI	TCCGGA	1 cut(s)	2251
MscI	TGGCCA	3 cut(s)	519, 1028, 1472
MseI	TTAA	7 cut(s)	273, 306, 332, 819, 1464, 1518, 2883
MslI	CAYNNNNRTG	4 cut(s)	735, 1194, 1268, 2093
Msp20I	TGGCCA	3 cut(s)	519, 1028, 1472
MspA1I	CMGCKG	1 cut(s)	1826
MspI	CCGG	5 cut(s)	281, 1036, 2239, 2252, 2409
MunI	CAATTG	3 cut(s)	1332, 1665, 2421
Mva1269I	GAATGC	4 cut(s)	342, 555, 1199, 3305
MvaI	CCWGG	9 cut(s)	299, 498, 659, 717, 1176, 1455, 1590, 2153, 2574
MwoI	GCNNNNNNNGC	8 cut(s)	61, 98, 1055, 1103, 1205, 1661, 2393, 3155
NciI	CCSGG	3 cut(s)	281, 1036, 1037
NdeI	CATATG	1 cut(s)	752
NlaIV	GGNNCC	5 cut(s)	296, 1614, 1986, 2460, 2680
NmuCI	GTSAC	5 cut(s)	17, 590, 1074, 1678, 1855
NsiI	ATGCAT	3 cut(s)	344, 2122, 3013
NspI	RCATGY	1 cut(s)	533
NspV	TTCGAA	1 cut(s)	1302
PagI	TCATGA	2 cut(s)	1372, 3244
PceI	AGGCCT	3 cut(s)	1498, 2166, 2217
PcsI	WCGNNNNNNNCGW	1 cut(s)	2635
PctI	GAATGC	4 cut(s)	342, 555, 1199, 3305
PfeI	GAWTC	6 cut(s)	319, 523, 1712, 1734, 2519, 3253
PfoI	TCCNGGA	1 cut(s)	2572
PinAI	ACCGGT	1 cut(s)	2408
PleI	GAGTC	4 cut(s)	1258, 1882, 2618, 3070
PpsI	GAGTC	4 cut(s)	1258, 1882, 2618, 3070
Ppu21I	YACGTR	1 cut(s)	1367
PpuMI	RGGWCCY	1 cut(s)	1441
PsiI	TTATAA	1 cut(s)	1697
Psp124BI	GAGCTC	1 cut(s)	1263
Psp5II	RGGWCCY	1 cut(s)	1441
Psp6I	CCWGG	9 cut(s)	297, 496, 657, 715, 1174, 1453, 1588, 2151, 2572
PspGI	CCWGG	9 cut(s)	297, 496, 657, 715, 1174, 1453, 1588, 2151, 2572
PspN4I	GGNNCC	5 cut(s)	296, 1614, 1986, 2460, 2680
PspPI	GGNCC	5 cut(s)	295, 1319, 1441, 1613, 1882
PspPPI	RGGWCCY	1 cut(s)	1441
PstI	CTGCAG	3 cut(s)	1428, 1606, 2609
PstNI	CAGNNNCTG	3 cut(s)	267, 1106, 1625
PsuI	RGATCY	2 cut(s)	244, 2942
RseI	CAYNNNNRTG	4 cut(s)	735, 1194, 1268, 2093
SacI	GAGCTC	1 cut(s)	1263
SaqAI	TTAA	7 cut(s)	273, 306, 332, 819, 1464, 1518, 2883
Sau96I	GGNCC	5 cut(s)	295, 1319, 1441, 1613, 1882
ScaI	AGTACT	2 cut(s)	964, 2580
SchI	GAGTC	4 cut(s)	1259, 1883, 2619, 3070
SduI	GDGCHC	5 cut(s)	1183, 1263, 1770, 2059, 2728
SfaNI	GCATC	6 cut(s)	222, 1198, 1238, 1661, 2328, 2837
SfcI	CTRYAG	5 cut(s)	1098, 1424, 1602, 2314, 2605
SfuI	TTCGAA	1 cut(s)	1302
SinI	GGWCC	4 cut(s)	295, 1319, 1441, 1613
SmaI	CCCGGG	1 cut(s)	1037
SmiMI	CAYNNNNRTG	4 cut(s)	735, 1194, 1268, 2093
SmlI	CTYRAG	2 cut(s)	1406, 2302
SmoI	CTYRAG	2 cut(s)	1406, 2302
SpeI	ACTAGT	1 cut(s)	773
SseBI	AGGCCT	3 cut(s)	1498, 2166, 2217
SsiI	CCGC	8 cut(s)	41, 211, 1043, 1751, 1826, 2563, 2777, 3213
SspI	AATATT	2 cut(s)	1480, 2437
SspMI	CTAG	9 cut(s)	774, 1011, 1254, 1652, 1739, 1853, 1919, 2112, 2946
SstI	GAGCTC	1 cut(s)	1263
StuI	AGGCCT	3 cut(s)	1498, 2166, 2217
StyI	CCWWGG	5 cut(s)	1738, 1878, 1905, 2218, 3031
TaiI	ACGT	2 cut(s)	1369, 1957
TaqI	TCGA	7 cut(s)	317, 1159, 1302, 1687, 1872, 2629, 2638
TatI	WGTACW	4 cut(s)	380, 962, 2578, 2985
TauI	GCSGC	5 cut(s)	43, 213, 1046, 1753, 2780
TfiI	GAWTC	6 cut(s)	319, 523, 1712, 1734, 2519, 3253
Tru1I	TTAA	7 cut(s)	273, 306, 332, 819, 1464, 1518, 2883
Tru9I	TTAA	7 cut(s)	273, 306, 332, 819, 1464, 1518, 2883
TseFI	GTSAC	5 cut(s)	17, 590, 1074, 1678, 1855
Tsp45I	GTSAC	5 cut(s)	17, 590, 1074, 1678, 1855
TspGWI	ACGGA	4 cut(s)	951, 1295, 1605, 1785
TspMI	CCCGGG	1 cut(s)	1035
VneI	GTGCAC	2 cut(s)	1179, 1766
VpaK11BI	GGWCC	4 cut(s)	295, 1319, 1441, 1613
XbaI	TCTAGA	1 cut(s)	1918
XceI	RCATGY	1 cut(s)	533
XmaI	CCCGGG	1 cut(s)	1035
XmaJI	CCTAGG	1 cut(s)	1738
XmiI	GTMKAC	2 cut(s)	933, 2310
XspI	CTAG	9 cut(s)	774, 1011, 1254, 1652, 1739, 1853, 1919, 2112, 2946
ZrmI	AGTACT	2 cut(s)	964, 2580
Zsp2I	ATGCAT	3 cut(s)	344, 2122, 3013

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.