Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr7

Orthogroup ID

OG0001624

Physical Location & Seq

Genomic Coordinates Forward (+)

18997155 .. 19002545

Gene Structure 5391 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom07g16600.14

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3342 bp

ATGATCTCCAAAGGCGCCAACTTTGGCACATTTGTTTCGGTTGGGGTTTTGGTTCTGTGCTGGGTGCACTTTGTGGAGTGCCAGGATGTGGGGGACTATGACCAAATAGACAACCCAGCAGTTATTCCTCTCATCACTCAGATTGTCTACGGCCGTATCTCCAATGTCACTGCAGTCCTCAGCCGACAAATCAGCAATCGTTCCAGCTTCTGCGTGAAGGACCCGGAAGCCGATTGGAACGAGGCGTTTAATTTTTCATCCAATGTGGATTTCTTAACTTCCTGCATTCAAAAAACTAAAGGAGATGTTACGCGGCGGTTGTGTACAGCAGCTGAAATGAAGTTCTACTTCAATAGTTTCTTTGAAAAATCTGAGACTACAAATTACTTAAGACCGAACAAGAACTGCAATTTGACCTCATGGATTTCTGGGTGTGAGCCAGGATGGGCTTGTCGTGTTGGCCCAAATGAGCAGGTTGACCTCGAAAATTCACAGGACATCCCTGCCAGGACTCAGAGCTGCCAACCCTGTTGTGAGGGTTTCTTTTGCCCCCATGGTCTTACATGCATGATACCTTGCCCATCAGGTTCTTATTGTCCCCAAGCAACGCTGAACAAATCCACCGGTGTGTGTGAACCATACAATTACCAATTACCTCCGGGGCAACCAAATCATACTTGTGGAGGAGCAAATTTATGGGCTGATGTTGGTAGTAGTAGTGAAGTATTTTGTTCAGATCGATCATATTGCCCAACCACCGTGAAAAGCATTCCTTGTAGTAGCGGACACTACTGCAGGATGGGTTCTACATCTGAGAAACGCTGCTTCGCTTTGACTTCCTGCAATCCAAACACTGCAAATCAAAATATGCATGCATATGGAATAATGCTAATTGCAGCTTTGAGTACTCTGCTACTTATTATATACAATTGTTCAGATCAAGTTCTCACCACTAGGGGGAGGAGACGGGCTAAATACCGAGAAGCAGCAGCCAGAAGTGCAAGGGAAACAGCAAAAGCACGCCAAAGATGGAAATCTGCAAAAGAAGCTGCTAAGAAGCATGCAAGTGGATTACAAGCTCACTTATCACGTACCTTTTCTCGAAAAAATGACAGCTCAGAACTTGAGAAACTTAAGATGTTGACTCAATCTAGATCTGACACAGATGATGACCTTTCGATATCACCACATCCAAGTAGATCCGGTGTTTCTCGGTCCTCACCTGTGCCATCAGAAGGAAAGAAAAAGGAACCTACTGAGCTCATGCAGATTATGCATAAAATTGAAGAAGACCCTGAGGGTTATGAAGGTTTCAGTATTGGAGCTGAGGATACGAATGTAGGAAATGTGCCAAAAGGAAAGACGATCAATACTCATAGCCAAATTTTCAAGTATGCTTATGGTCAACTTGAGAAAGAGAAGGCTCAGCTGCAAGAGTACAAGGACCTAACCTTCTCAGGGGTGGTTAAAATGGCTACTAATAACGAAATAAGGAAACGGCCTCTCATTGAGATTTCTTTCAAAGACCTAACGCTTACTTTGAAAGCAATAAACAAGCATCTACTGAGGTGTGTAACTGGTAAAATTAGGCCTGGCCGCATCACTGCTGTTATGGGTCCATCAGGGGCTGGAAAAACAACGTTTCTTTCTGCCCTAGCTGGAAAAGCAATTGGATGCAATACGACTGGTTTAATTCTCATAAATGGAAAGAATACATCAATCCATTCATATAAAAAAATCGTAGGGTTTGTGCCGCAAGATGATATCGTGCACGGAAACTTGACTGTGGAAGAGAATCTATGGTTTAGTGCTAAGTGCAGATTATCCGTGGATGTACCAAAAGCGGACAAGGTTTTAGTGGTTGAAAGAGTTATCGAGTCCTTGGGGCTTCAAACAGTACGTGGTTCCTTAGTTGGAACGGTAGAGAAGCGAGGAGTTTCTGGAGGCCAGAGGAAACGTGTAAATGTTGGCTTGGAAATGGTTATGGAACCTTCACTTTTGATTTTGGATGAGCCCACATCCGGTCTAGACAGCGCCTCGTCTCAGCTACTTCTTAGAGCACTTAGACGGGAAGCTCTTGAAGGGGTAAATATCTGCATGGTGGTTCACCAGCCTAGCTATGCCTTGTTCAAGATGTTTGATGATCTGGTACTCCTGGCAAAAGGTGGTCTAACTGTTTATCATGGACCAGCAAAGAAAGTAGAAGAATACTTTGCAGGCCTTGGGATCAATGTCCCAGACCGAGTCAATCCTCCAGACCACTTCATTGACATTTTAGAGGGTATAGTCGCAACGGAAAGAAGCTCGGGAGTGAGTTATGATGAGCTTCCCATTAGATGGATGCTTCATAATGGGTACTCAGTACCTCCTGAGATGAGGCAGAGTGCCACCGGACTCGCAATGTCATCAATGGATGAAAATTCAAATCGTGAAACAAATTCTTCTGGTGATGATGTGATGGAACGGTCTTTTGTCGGAGAGGTATGGCAAGATGTGAAAAGTACTGTGGATCTGAATCGTGATAAGATACAGCTTAATTTCTTGAAATCCAAGGATTTATCGAACCGGAGAATTCCAGGTTTATGTCTACAGTACAGATACTTCCTGGGCAGAGTTGGTAAGCAGAGACTACGGGAAGCTCGCATGCAAGCAGTGGATTATTTGATTTTATTTCTTGCTGGAGCCTGCTTAGGATCACTTTCAAACGTCAGAGATCAGACCTTTGGTGCAGGCGGTTACACTTATACTGTTATTGCAGTTTCTCTACTGTGCAAAATTGCGGCTTTGAGGTCGTTTTCTCTAGACAGATTACACTATTGGAGAGAGAGTGCTTCGGGGATGAGCAGCTTGGCTTATTTCCTGGCTAAGGATACTATTGATCATTTTAATACAGTGATCAAACCTGTAGTGTATTTGTCTATGTTCTACTTCTTTACCAACCCAAGATCTAGGTTTGCAGATAACTACGTTGTTCTGGTCTGCCTCGTGTATTGTGTAACTGGTATAGCCTACGCGTTAGCAATCTCTTTCGAACAAGGTGCAGCCCAACTATTATCGGTACTTCTTCCAGTTGTTTTGACTCTCATAGCAACACGGCAGCAAGATAGTGAATTTATGAAGATTTTAGCTAAGTTGTGCTACCCGAGGTGGGCGTTGGAGGCATTAGTGACTGCAAATGCTGAAAGGTATGCCGGAGTATGGCTGATAACTCGCTGCGGGTCACTTCTAAAAACCGGCTATAATCTTCATAACTGGAATCTTTGTATAATCATCCTAACATTCATCGGCGTAGTTAGTCGGGCGATAGCGTTCTTTTGTATGGTGACCTTTCAGAAGAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0008150 GO:0015399 GO:0015405 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0031224 GO:0042623 GO:0042626 GO:0043492 GO:0044425 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC_tran

Protein Analysis

1114

Amino Acids

123.37

Weight (kDa)

8.79

Isoelectric Point (pI)

43.14

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001624)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53390
fragaria_vesca	FvH4_6g32451 FvH4_7g18960 FvH4_7g18960
malus_domestica	MD00G1214200.v1.1
prunus_persica	Prupe.2G210600_v2.0.a1 Prupe.2G210600_v2.0.a1 Prupe.2G210600_v2.0.a1
pyrus_communis	pycom01g13180 pycom01g13190 pycom07g16600
rosa_chinensis	RchiOBHm_Chr1g0360271 RchiOBHm_Chr1g0362891 RchiOBHm_Chr2g0140691 RchiOBHm_Chr2g0140701
rosa_laevigata	RLG00000003015 RLG00000019892 RLG00000019893 RLG00000027614
rosa_multiflora	Rmu_co8315067.1_g000001 Rmu_sc0001502.1_g000011 Rmu_sc0003342.1_g000012 Rmu_sc0003342.1_g000013
rosa_roxburghii	Rroxscaffold_1G00043370 Rroxscaffold_2G00104570 Rroxscaffold_2G00104580 Rroxscaffold_3G00227580 Rroxscaffold_4G00293670 Rroxscaffold_5G00347780 Rroxscaffold_5G00347800
rosa_rugosa	Rorug01G0302100 Rorug02G0364100 Rorug02G0364100 Rorug03G0261700
rosa_samantha	Rh1AG185000 Rh1AG311300 Rh1BG274400 Rh1DG305200 Rh2AG327100 Rh2AG415900 Rh2BG425300 Rh2BG425400 Rh2DG435400 Rh4AG110400 Rh6DG223100 Rh7BG077900
rosa_wichuraiana	Rw1G027590 Rw2G034020 Rw2G034030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	463
AccB1I	GGYRCC	1 cut(s)	14
AccB7I	CCANNNNNTGG	2 cut(s)	88, 2337
AccI	GTMKAC	2 cut(s)	147, 2587
AccII	CGCG	2 cut(s)	313, 3014
AciI	CCGC	9 cut(s)	313, 316, 783, 1597, 1754, 1844, 2733, 2780, 3216
AclI	AACGTT	1 cut(s)	1640
AclWI	GGATC	4 cut(s)	1194, 2234, 2517, 2701
AcoI	YGGCCR	2 cut(s)	151, 1594
AcsI	RAATTY	7 cut(s)	487, 691, 1383, 2419, 2437, 2571, 3110
AcyI	GRCGYC	1 cut(s)	15
AdeI	CACNNNGTG	1 cut(s)	73
AfiI	CCNNNNNNNGG	9 cut(s)	88, 957, 1235, 1458, 2021, 2337, 2866, 3148, 3198
AflII	CTTAAG	2 cut(s)	388, 1133
AflIII	ACRYGT	2 cut(s)	1957, 3012
AgeI	ACCGGT	1 cut(s)	623
AjnI	CCWGG	8 cut(s)	81, 439, 506, 1591, 2154, 2575, 2604, 2859
AjuI	GAANNNNNNNTTGG	2 cut(s)	254, 286
AleI	CACNNNNGTG	1 cut(s)	626
Alw21I	GWGCWC	4 cut(s)	69, 1263, 1773, 2062
Alw26I	GTCTC	4 cut(s)	368, 958, 2046, 2620
Alw44I	GTGCAC	2 cut(s)	65, 1769
AlwI	GGATC	4 cut(s)	1194, 2234, 2517, 2701
AlwNI	CAGNNNCTG	3 cut(s)	210, 332, 1628
Ama87I	CYCGRG	2 cut(s)	2305, 3142
AoxI	GGCC	7 cut(s)	151, 460, 1499, 1589, 1594, 1945, 2218
ApaLI	GTGCAC	2 cut(s)	65, 1769
ApoI	RAATTY	7 cut(s)	487, 691, 1383, 2419, 2437, 2571, 3110
AsiGI	ACCGGT	1 cut(s)	623
AspLEI	GCGC	2 cut(s)	17, 2036
AspS9I	GGNCC	6 cut(s)	220, 461, 1215, 1444, 1616, 2186
AsuC2I	CCSGG	2 cut(s)	224, 660
AsuHPI	GGTGA	6 cut(s)	940, 1176, 1212, 2099, 2459, 3334
AsuII	TTCGAA	1 cut(s)	3030
AvaI	CYCGRG	2 cut(s)	2305, 3142
AvaII	GGWCC	5 cut(s)	220, 1215, 1444, 1616, 2186
AxyI	CCTNAGG	1 cut(s)	1296
BaeGI	GKGCMC	2 cut(s)	69, 1773
BaeI	ACNNNNGTAYC	4 cut(s)	139, 172, 1323, 1356
BanI	GGYRCC	1 cut(s)	14
BanII	GRGCYC	2 cut(s)	1263, 2016
BarI	GAAGNNNNNNTAC	2 cut(s)	2585, 2617
BauI	CACGAG	1 cut(s)	2984
BbsI	GAAGAC	1 cut(s)	1296
Bbv12I	GWGCWC	4 cut(s)	69, 1263, 1773, 2062
BbvCI	CCTCAGC	2 cut(s)	179, 1326
BccI	CCATC	8 cut(s)	438, 589, 793, 1023, 1237, 1627, 2331, 2452
BceAI	ACGGC	4 cut(s)	138, 166, 1514, 3110
BcgI	CGANNNNNNTGC	4 cut(s)	729, 763, 3020, 3054
BciT130I	CCWGG	8 cut(s)	83, 441, 508, 1593, 2156, 2577, 2606, 2861
BciVI	GTATCC	2 cut(s)	1324, 2863
BclI	TGATCA	2 cut(s)	2878, 2895
BcnI	CCSGG	2 cut(s)	224, 660
BcoDI	GTCTC	4 cut(s)	368, 958, 2046, 2620
BfaI	CTAG	7 cut(s)	954, 1152, 1655, 2027, 2115, 2801, 2949
BfmI	CTRYAG	4 cut(s)	171, 793, 2588, 2904
BfoI	RGCGCY	2 cut(s)	18, 2037
BfrI	CTTAAG	2 cut(s)	388, 1133
BfuAI	ACCTGC	1 cut(s)	463
BfuI	GTATCC	2 cut(s)	1324, 2863
BglII	AGATCT	2 cut(s)	1154, 2945
BlpI	GCTNAGC	1 cut(s)	1425
BmcAI	AGTACT	2 cut(s)	907, 2503
Bme18I	GGWCC	5 cut(s)	220, 1215, 1444, 1616, 2186
BmeT110I	CYCGRG	2 cut(s)	2305, 3142
BmgT120I	GGNCC	6 cut(s)	220, 461, 1215, 1444, 1616, 2186
BmiI	GGNNCC	7 cut(s)	16, 222, 1251, 1617, 1906, 1989, 2683
BmsI	GCATC	4 cut(s)	1567, 1608, 1664, 2331
BpiI	GAAGAC	1 cut(s)	1296
BpmI	CTGGAG	3 cut(s)	1962, 2238, 2700
Bpu10I	CCTNAGC	4 cut(s)	179, 1326, 2689, 2865
Bpu1102I	GCTNAGC	1 cut(s)	1425
Bpu14I	TTCGAA	1 cut(s)	3030
BpuEI	CTTGAG	2 cut(s)	1145, 1430
BpuMI	CCSGG	2 cut(s)	224, 660
Bsa29I	ATCGAT	1 cut(s)	739
BsaAI	YACGTR	2 cut(s)	1091, 1901
BsaBI	GATNNNNATC	2 cut(s)	1033, 2514
BsaHI	GRCGYC	1 cut(s)	15
BsaJI	CCNNGG	8 cut(s)	553, 659, 1827, 1881, 2221, 2550, 2605, 3143
BsaWI	WCCGGW	5 cut(s)	623, 1202, 2021, 2390, 2565
BsaXI	ACNNNNNCTCC	2 cut(s)	2812, 2842
Bsc4I	CCNNNNNNNGG	9 cut(s)	88, 957, 1235, 1458, 2021, 2337, 2866, 3148, 3198
Bse118I	RCCGGY	2 cut(s)	623, 3233
Bse1I	ACTGG	5 cut(s)	1582, 1690, 3004, 3068, 3257
Bse21I	CCTNAGG	1 cut(s)	1296
Bse3DI	GCAATG	1 cut(s)	2406
Bse8I	GATNNNNATC	2 cut(s)	1033, 2514
BseBI	CCWGG	8 cut(s)	83, 441, 508, 1593, 2156, 2577, 2606, 2861
BseCI	ATCGAT	1 cut(s)	739
BseDI	CCNNGG	8 cut(s)	553, 659, 1827, 1881, 2221, 2550, 2605, 3143
BseJI	GATNNNNATC	2 cut(s)	1033, 2514
BseLI	CCNNNNNNNGG	9 cut(s)	88, 957, 1235, 1458, 2021, 2337, 2866, 3148, 3198
BseMI	GCAATG	1 cut(s)	2406
BseNI	ACTGG	5 cut(s)	1582, 1690, 3004, 3068, 3257
BseRI	GAGGAG	3 cut(s)	699, 976, 1947
BseSI	GKGCMC	2 cut(s)	69, 1773
BseX3I	CGGCCG	1 cut(s)	151
BseYI	CCCAGC	2 cut(s)	60, 115
BsgI	GTGCAG	3 cut(s)	1837, 2748, 3060
Bsh1236I	CGCG	2 cut(s)	313, 3014
Bsh1285I	CGRYCG	1 cut(s)	154
BshFI	GGCC	7 cut(s)	153, 462, 1501, 1591, 1596, 1947, 2220
BshNI	GGYRCC	1 cut(s)	14
BshTI	ACCGGT	1 cut(s)	623
BshVI	ATCGAT	1 cut(s)	739
BsiEI	CGRYCG	1 cut(s)	154
BsiHKAI	GWGCWC	4 cut(s)	69, 1263, 1773, 2062
BsiHKCI	CYCGRG	2 cut(s)	2305, 3142
BsiSI	CCGG	9 cut(s)	224, 624, 659, 1203, 2022, 2391, 2566, 3192, 3234
BslFI	GGGAC	3 cut(s)	107, 582, 2219
BslI	CCNNNNNNNGG	9 cut(s)	88, 957, 1235, 1458, 2021, 2337, 2866, 3148, 3198
BsmAI	GTCTC	4 cut(s)	368, 958, 2046, 2620
BsmBI	CGTCTC	2 cut(s)	958, 2046
BsmFI	GGGAC	3 cut(s)	107, 582, 2219
BsmI	GAATGC	2 cut(s)	285, 768
BsnI	GGCC	7 cut(s)	153, 462, 1501, 1591, 1596, 1947, 2220
BsoBI	CYCGRG	2 cut(s)	2305, 3142
Bsp119I	TTCGAA	1 cut(s)	3030
Bsp1286I	GDGCHC	5 cut(s)	69, 1263, 1773, 2016, 2062
Bsp1407I	TGTACA	1 cut(s)	323
Bsp1720I	GCTNAGC	1 cut(s)	1425
Bsp19I	CCATGG	1 cut(s)	553
BspACI	CCGC	9 cut(s)	313, 316, 783, 1597, 1754, 1844, 2733, 2780, 3216
BspANI	GGCC	7 cut(s)	153, 462, 1501, 1591, 1596, 1947, 2220
BspDI	ATCGAT	1 cut(s)	739
BspFNI	CGCG	2 cut(s)	313, 3014
BspLI	GGNNCC	7 cut(s)	16, 222, 1251, 1617, 1906, 1989, 2683
BspMAI	CTGCAG	2 cut(s)	175, 797
BspMI	ACCTGC	1 cut(s)	463
BspPI	GGATC	4 cut(s)	1194, 2234, 2517, 2701
BspT104I	TTCGAA	1 cut(s)	3030
BspT107I	GGYRCC	1 cut(s)	14
BspTI	CTTAAG	2 cut(s)	388, 1133
BsrDI	GCAATG	1 cut(s)	2406
BsrFI	RCCGGY	2 cut(s)	623, 3233
BsrGI	TGTACA	1 cut(s)	323
BsrI	ACTGG	5 cut(s)	1582, 1690, 3004, 3068, 3257
BssAI	RCCGGY	2 cut(s)	623, 3233
BssECI	CCNNGG	8 cut(s)	553, 659, 1827, 1881, 2221, 2550, 2605, 3143
BssNI	GRCGYC	1 cut(s)	15
BssSI	CACGAG	1 cut(s)	2984
BssT1I	CCWWGG	4 cut(s)	553, 1881, 2221, 2550
Bst2BI	CACGAG	1 cut(s)	2984
Bst2UI	CCWGG	8 cut(s)	83, 441, 508, 1593, 2156, 2577, 2606, 2861
Bst6I	CTCTTC	1 cut(s)	1785
BstACI	GRCGYC	1 cut(s)	15
BstAFI	CTTAAG	2 cut(s)	388, 1133
BstAPI	GCANNNNNTGC	1 cut(s)	1273
BstAUI	TGTACA	1 cut(s)	323
BstBAI	YACGTR	2 cut(s)	1091, 1901
BstBI	TTCGAA	1 cut(s)	3030
BstC8I	GCNNGC	9 cut(s)	873, 1021, 1062, 2218, 2641, 2645, 2649, 2686, 2731
BstDSI	CCRYGG	2 cut(s)	553, 1827
BstEII	GGTNACC	1 cut(s)	3322
BstENI	CCTNNNNNAGG	1 cut(s)	2864
BstFNI	CGCG	2 cut(s)	313, 3014
BstH2I	RGCGCY	2 cut(s)	18, 2037
BstHHI	GCGC	2 cut(s)	17, 2036
BstMAI	GTCTC	4 cut(s)	368, 958, 2046, 2620
BstMCI	CGRYCG	1 cut(s)	154
BstMWI	GCNNNNNNNGC	5 cut(s)	998, 1046, 1273, 1664, 3158
BstNI	CCWGG	8 cut(s)	83, 441, 508, 1593, 2156, 2577, 2606, 2861
BstNSI	RCATGY	4 cut(s)	567, 875, 1064, 2647
BstPI	GGTNACC	1 cut(s)	3322
BstSFI	CTRYAG	4 cut(s)	171, 793, 2588, 2904
BstSLI	GKGCMC	2 cut(s)	69, 1773
BstUI	CGCG	2 cut(s)	313, 3014
BstV2I	GAAGAC	1 cut(s)	1296
BstX2I	RGATCY	4 cut(s)	1154, 1199, 2509, 2945
BstYI	RGATCY	4 cut(s)	1154, 1199, 2509, 2945
BstZI	CGGCCG	1 cut(s)	151
Bsu15I	ATCGAT	1 cut(s)	739
Bsu36I	CCTNAGG	1 cut(s)	1296
BsuI	GTATCC	2 cut(s)	1324, 2863
BsuRI	GGCC	7 cut(s)	153, 462, 1501, 1591, 1596, 1947, 2220
BsuTUI	ATCGAT	1 cut(s)	739
BtgI	CCRYGG	2 cut(s)	553, 1827
BtsI	GCAGTG	4 cut(s)	168, 852, 1602, 2658
BtsIMutI	CAGTG	5 cut(s)	168, 852, 1602, 2658, 2898
BveI	ACCTGC	1 cut(s)	463
Cac8I	GCNNGC	9 cut(s)	873, 1021, 1062, 2218, 2641, 2645, 2649, 2686, 2731
CaiI	CAGNNNCTG	3 cut(s)	210, 332, 1628
CfoI	GCGC	2 cut(s)	17, 2036
Cfr10I	RCCGGY	2 cut(s)	623, 3233
Cfr13I	GGNCC	6 cut(s)	220, 461, 1215, 1444, 1616, 2186
ClaI	ATCGAT	1 cut(s)	739
CspAI	ACCGGT	1 cut(s)	623
DinI	GGCGCC	1 cut(s)	16
DraIII	CACNNNGTG	1 cut(s)	73
EaeI	YGGCCR	2 cut(s)	151, 1594
EagI	CGGCCG	1 cut(s)	151
Eam1104I	CTCTTC	1 cut(s)	1785
EarI	CTCTTC	1 cut(s)	1785
Ecl136II	GAGCTC	1 cut(s)	1261
EclXI	CGGCCG	1 cut(s)	151
Eco130I	CCWWGG	4 cut(s)	553, 1881, 2221, 2550
Eco147I	AGGCCT	2 cut(s)	1591, 2220
Eco24I	GRGCYC	2 cut(s)	1263, 2016
Eco32I	GATATC	2 cut(s)	1182, 1765
Eco47I	GGWCC	5 cut(s)	220, 1215, 1444, 1616, 2186
Eco52I	CGGCCG	1 cut(s)	151
Eco53kI	GAGCTC	1 cut(s)	1261
Eco81I	CCTNAGG	1 cut(s)	1296
Eco88I	CYCGRG	2 cut(s)	2305, 3142
Eco91I	GGTNACC	1 cut(s)	3322
EcoICRI	GAGCTC	1 cut(s)	1261
EcoNI	CCTNNNNNAGG	1 cut(s)	2864
EcoO109I	RGGNCCY	2 cut(s)	220, 1444
EcoO65I	GGTNACC	1 cut(s)	3322
EcoRI	GAATTC	1 cut(s)	2571
EcoRII	CCWGG	8 cut(s)	81, 439, 506, 1591, 2154, 2575, 2604, 2859
EcoRV	GATATC	2 cut(s)	1182, 1765
EcoT14I	CCWWGG	4 cut(s)	553, 1881, 2221, 2550
EcoT22I	ATGCAT	4 cut(s)	569, 873, 877, 1278
EcoT38I	GRGCYC	2 cut(s)	1263, 2016
EgeI	GGCGCC	1 cut(s)	16
EheI	GGCGCC	1 cut(s)	16
ErhI	CCWWGG	4 cut(s)	553, 1881, 2221, 2550
Esp3I	CGTCTC	2 cut(s)	958, 2046
FalI	AAGNNNNNCTT	4 cut(s)	332, 364, 757, 789
FaqI	GGGAC	3 cut(s)	107, 582, 2219
FauI	CCCGC	1 cut(s)	3209
FauNDI	CATATG	1 cut(s)	877
FbaI	TGATCA	2 cut(s)	2878, 2895
FblI	GTMKAC	2 cut(s)	147, 2587
FriOI	GRGCYC	2 cut(s)	1263, 2016
FspBI	CTAG	7 cut(s)	954, 1152, 1655, 2027, 2115, 2801, 2949
GlaI	GCGC	2 cut(s)	16, 2035
GsaI	CCCAGC	2 cut(s)	64, 119
GsuI	CTGGAG	3 cut(s)	1962, 2238, 2700
HaeII	RGCGCY	2 cut(s)	18, 2037
HaeIII	GGCC	7 cut(s)	153, 462, 1501, 1591, 1596, 1947, 2220
HapII	CCGG	9 cut(s)	224, 624, 659, 1203, 2022, 2391, 2566, 3192, 3234
HhaI	GCGC	2 cut(s)	17, 2036
Hin1I	GRCGYC	1 cut(s)	15
Hin6I	GCGC	2 cut(s)	15, 2034
HinP1I	GCGC	2 cut(s)	15, 2034
HincII	GTYRAC	3 cut(s)	478, 1143, 1406
HindII	GTYRAC	3 cut(s)	478, 1143, 1406
HinfI	GANTC	9 cut(s)	511, 1144, 1795, 1877, 2244, 2394, 2515, 3079, 3256
HpaII	CCGG	9 cut(s)	224, 624, 659, 1203, 2022, 2391, 2566, 3192, 3234
HphI	GGTGA	6 cut(s)	940, 1176, 1212, 2099, 2459, 3334
HpyAV	CCTTC	7 cut(s)	211, 1229, 1301, 1414, 1462, 2001, 2075
HpyCH4IV	ACGT	6 cut(s)	1090, 1640, 1900, 1957, 2706, 2967
HpyF10VI	GCNNNNNNNGC	5 cut(s)	998, 1046, 1273, 1664, 3158
HpySE526I	ACGT	6 cut(s)	1090, 1640, 1900, 1957, 2706, 2967
Hsp92I	GRCGYC	1 cut(s)	15
HspAI	GCGC	2 cut(s)	15, 2034
KasI	GGCGCC	1 cut(s)	14
Ksp22I	TGATCA	2 cut(s)	2878, 2895
LmnI	GCTCC	3 cut(s)	686, 1322, 2681
LweI	GCATC	4 cut(s)	1567, 1608, 1664, 2331
MaeI	CTAG	7 cut(s)	954, 1152, 1655, 2027, 2115, 2801, 2949
MaeII	ACGT	6 cut(s)	1090, 1640, 1900, 1957, 2706, 2967
MaeIII	GTNAC	8 cut(s)	166, 307, 1573, 2735, 2995, 3166, 3219, 3322
MboII	GAAGA	8 cut(s)	1298, 1301, 1802, 2216, 2433, 3056, 3130, 3236
MfeI	CAATTG	2 cut(s)	928, 1668
MflI	RGATCY	4 cut(s)	1154, 1199, 2509, 2945
MhlI	GDGCHC	5 cut(s)	69, 1263, 1773, 2016, 2062
MluI	ACGCGT	1 cut(s)	3012
Mly113I	GGCGCC	1 cut(s)	15
MlyI	GAGTC	6 cut(s)	505, 1138, 1886, 2253, 2388, 3073
MmeI	TCCRAC	3 cut(s)	1894, 2455, 3135
Mph1103I	ATGCAT	4 cut(s)	569, 873, 877, 1278
MseI	TTAA	8 cut(s)	249, 275, 389, 1134, 1467, 1691, 2535, 2886
MslI	CAYNNNNRTG	4 cut(s)	626, 678, 876, 1065
MspA1I	CMGCKG	2 cut(s)	332, 1429
MspCI	CTTAAG	2 cut(s)	388, 1133
MspI	CCGG	9 cut(s)	224, 624, 659, 1203, 2022, 2391, 2566, 3192, 3234
MunI	CAATTG	2 cut(s)	928, 1668
Mva1269I	GAATGC	2 cut(s)	285, 768
MvaI	CCWGG	8 cut(s)	83, 441, 508, 1593, 2156, 2577, 2606, 2861
MvnI	CGCG	2 cut(s)	313, 3014
MwoI	GCNNNNNNNGC	5 cut(s)	998, 1046, 1273, 1664, 3158
NarI	GGCGCC	1 cut(s)	15
NciI	CCSGG	2 cut(s)	224, 660
NcoI	CCATGG	1 cut(s)	553
NdeI	CATATG	1 cut(s)	877
NlaIV	GGNNCC	7 cut(s)	16, 222, 1251, 1617, 1906, 1989, 2683
NmuCI	GTSAC	4 cut(s)	166, 3166, 3219, 3322
NsiI	ATGCAT	4 cut(s)	569, 873, 877, 1278
NspI	RCATGY	4 cut(s)	567, 875, 1064, 2647
NspV	TTCGAA	1 cut(s)	3030
OliI	CACNNNNGTG	1 cut(s)	626
PaeI	GCATGC	3 cut(s)	875, 1064, 2647
PceI	AGGCCT	2 cut(s)	1591, 2220
PctI	GAATGC	2 cut(s)	285, 768
PfeI	GAWTC	3 cut(s)	1795, 2515, 3256
PflFI	GACNNNGTC	1 cut(s)	2243
PflMI	CCANNNNNTGG	2 cut(s)	88, 2337
PinAI	ACCGGT	1 cut(s)	623
PleI	GAGTC	6 cut(s)	505, 1138, 1885, 2252, 2388, 3073
PluTI	GGCGCC	1 cut(s)	18
PpsI	GAGTC	6 cut(s)	505, 1138, 1885, 2252, 2388, 3073
Ppu21I	YACGTR	2 cut(s)	1091, 1901
PpuMI	RGGWCCY	2 cut(s)	220, 1444
Psp124BI	GAGCTC	1 cut(s)	1263
Psp1406I	AACGTT	1 cut(s)	1640
Psp5II	RGGWCCY	2 cut(s)	220, 1444
Psp6I	CCWGG	8 cut(s)	81, 439, 506, 1591, 2154, 2575, 2604, 2859
PspEI	GGTNACC	1 cut(s)	3322
PspFI	CCCAGC	2 cut(s)	60, 115
PspGI	CCWGG	8 cut(s)	81, 439, 506, 1591, 2154, 2575, 2604, 2859
PspN4I	GGNNCC	7 cut(s)	16, 222, 1251, 1617, 1906, 1989, 2683
PspPI	GGNCC	6 cut(s)	220, 461, 1215, 1444, 1616, 2186
PspPPI	RGGWCCY	2 cut(s)	220, 1444
PstI	CTGCAG	2 cut(s)	175, 797
PstNI	CAGNNNCTG	3 cut(s)	210, 332, 1628
PsuI	RGATCY	4 cut(s)	1154, 1199, 2509, 2945
PsyI	GACNNNGTC	1 cut(s)	2243
PvuII	CAGCTG	2 cut(s)	332, 1429
RseI	CAYNNNNRTG	4 cut(s)	626, 678, 876, 1065
SacI	GAGCTC	1 cut(s)	1263
SaqAI	TTAA	8 cut(s)	249, 275, 389, 1134, 1467, 1691, 2535, 2886
Sau96I	GGNCC	6 cut(s)	220, 461, 1215, 1444, 1616, 2186
ScaI	AGTACT	2 cut(s)	907, 2503
SchI	GAGTC	6 cut(s)	505, 1138, 1886, 2253, 2388, 3073
SduI	GDGCHC	5 cut(s)	69, 1263, 1773, 2016, 2062
SfaNI	GCATC	4 cut(s)	1567, 1608, 1664, 2331
SfcI	CTRYAG	4 cut(s)	171, 793, 2588, 2904
SfoI	GGCGCC	1 cut(s)	16
SfuI	TTCGAA	1 cut(s)	3030
SgrAI	CRCCGGYG	1 cut(s)	623
SinI	GGWCC	5 cut(s)	220, 1215, 1444, 1616, 2186
SmiMI	CAYNNNNRTG	4 cut(s)	626, 678, 876, 1065
SmlI	CTYRAG	4 cut(s)	388, 1124, 1133, 1409
SmoI	CTYRAG	4 cut(s)	388, 1124, 1133, 1409
SphI	GCATGC	3 cut(s)	875, 1064, 2647
SseBI	AGGCCT	2 cut(s)	1591, 2220
SsiI	CCGC	9 cut(s)	313, 316, 783, 1597, 1754, 1844, 2733, 2780, 3216
SspDI	GGCGCC	1 cut(s)	14
SspMI	CTAG	7 cut(s)	954, 1152, 1655, 2027, 2115, 2801, 2949
SstI	GAGCTC	1 cut(s)	1263
StuI	AGGCCT	2 cut(s)	1591, 2220
StyI	CCWWGG	4 cut(s)	553, 1881, 2221, 2550
TaiI	ACGT	6 cut(s)	1093, 1643, 1903, 1960, 2709, 2970
TaqI	TCGA	7 cut(s)	483, 739, 1102, 1178, 1875, 2561, 3030
TaqII	GACCGA	3 cut(s)	409, 1203, 2256
TatI	WGTACW	5 cut(s)	323, 905, 1437, 2501, 2592
TauI	GCSGC	4 cut(s)	316, 1599, 1756, 2783
TfiI	GAWTC	3 cut(s)	1795, 2515, 3256
Tru1I	TTAA	8 cut(s)	249, 275, 389, 1134, 1467, 1691, 2535, 2886
Tru9I	TTAA	8 cut(s)	249, 275, 389, 1134, 1467, 1691, 2535, 2886
TscAI	CASTG	5 cut(s)	175, 859, 1609, 2658, 2898
TseFI	GTSAC	4 cut(s)	166, 3166, 3219, 3322
Tsp45I	GTSAC	4 cut(s)	166, 3166, 3219, 3322
TspGWI	ACGGA	3 cut(s)	1788, 1816, 2309
TspRI	CASTG	5 cut(s)	175, 859, 1609, 2658, 2898
Tth111I	GACNNNGTC	1 cut(s)	2243
Van91I	CCANNNNNTGG	2 cut(s)	88, 2337
Vha464I	CTTAAG	2 cut(s)	388, 1133
VneI	GTGCAC	2 cut(s)	65, 1769
VpaK11BI	GGWCC	5 cut(s)	220, 1215, 1444, 1616, 2186
XagI	CCTNNNNNAGG	1 cut(s)	2864
XapI	RAATTY	7 cut(s)	487, 691, 1383, 2419, 2437, 2571, 3110
XbaI	TCTAGA	3 cut(s)	1151, 2026, 2800
XceI	RCATGY	4 cut(s)	567, 875, 1064, 2647
XmiI	GTMKAC	2 cut(s)	147, 2587
XspI	CTAG	7 cut(s)	954, 1152, 1655, 2027, 2115, 2801, 2949
ZrmI	AGTACT	2 cut(s)	907, 2503
Zsp2I	ATGCAT	4 cut(s)	569, 873, 877, 1278

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.