Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003342.1

Orthogroup ID

OG0001624

Physical Location & Seq

Genomic Coordinates Reverse (-)

51358 .. 58206

Gene Structure 6849 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003342.1_g000012.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3126 bp

atggtgcaatctgagccgtttgatttcaactaccgcttgatctgggccgtgcatcactcattctatgtgaagtataaatatcaggctcgaaagtctcgactgtgcatggcgagagtggttttcggcatgagtgtcgggcgattttggttgcaatcgatcggcgaagaccgagttaagaggtttgatctactcttcgagttcattttcgagttttggttgggacaagacttatatgactttgaccaaattgacgaccctactgttctcccactcatcacacagattgtgtatggccgcatctccaatgccacagcaattctcagtcgggatcttagcaaccattccagcttctgtgtaaaagacccggaagctgattggaaccaggcatttaacttttcgtccaatctggatttcttggaatcatgcattcaaaagactaaagcggagatgaaattctacttcaaaagtttatttgaaaaatctgagagcgcaaattacgtgaagcctaatgaaaattgtaattttacctcatggatttcggggtgtgaacctggatgggcttgtagcattggccagaatcagcatgttgaccttcaaaattcagacgacattcttgctagaactcacaactgccagccttgttgtgacggtttcttctgtccacacggtcttacttgcatgataccttgtccgtcgggttcttattgtcccccggcaacactggacaaaacgactggtgtttgtgaaccatacaaataccaactacctccagggaaaccaaaccatacttgtggaggagcaaacatatgggcagatgttggtactagtagtgaagtattttgtccagttggatcatactgtccaacgactgcagctctgagtactcttctacttattttttacaatttttcctaccaagttctcaccactaggaacaggacactggacaaatcaagggaaacggcagcaaaaaatgcaaggcagatagcaaagtcatggaaatatgctgcagacgctgcaaagaattttacaagtggattgccagctcatttatcacccaagttttctaaaaaaaaggacgtcccaggtgcacctctgcatccaagtgcattctctgcttctttgtcctcacctgtgccatctaaaggaaagcaaaaggaatctggtgagctgatccagatgagtgaaactgaagacaatccagagagttttgaaccgtttatatttggacctgaggatacaattgtaggaaatgtgtcaagaggaaaagtaacacgtactcatgaccagatattcaagtatgcttatactcaacttgagaaagagaaggctctgcagcaagactacaagggccttaccttacctggggtggttaaaatggccaataatattcagacaaggaaaaggcctctgatggagatttatcttaaagaccttgcacttactttgaaagcgcaaaataaacatatactgagatgtgtaactggtaaaataaagcctggctgcattactgcagtcatgggtccgtcaggtgctgggaaaacaacatttatttctgctctagctggaaaagcaattggatgcaaggtgactggtctaattcttataaatggaaagaatgaagcaatccattcgtataaaagaatcataggttttgtgccgcaagatgatattgtgcacggaaacttgacagtggaagagaatttggggttcagtgcaaagtgcagattgtcagtggacttatcaaaagcagatgaatttctagtgactgaaagagttatcgagtccttgggccttcagacggtacgcaattccttggttggaactgtagagaagcgaggaatttctggaggacagaggaaacgtgtgaatgttgccatggaaatggttatggaaccttcacttttgattttggatgaacccacatcagggttggacagtgcctcttctcagctacttcttagagcacttagacgggaagcttttgaaggggtaaacatttgcatggtggttcaccaacctagttatgcattattcaagatgtttgatgatcttgtactcctggcaaaagggggccttactgtctatcatggatcagcggagaaagttgaagaatactttgcaggccttggggtcaacgtcccagaccggatcaatcctccggactactttattgacattttggagggaatagtaacaacagaacgcagctcaagtgtatactataaagagcttcctatcagatggatgcttcataaggggtactcagtaccccctgatatgtggcacagtactgctggacttgcatcgtcctcaactggtggaaattcaattgatgaaacaaatattgctgctgctgaaatggaggaaccatctgtttcagcaagtctaaggaaatacataaagcctaatgtaaaattgaattgtgattcaatatggctcaatttcttgaaatccaatgatttatcaaaccggagaactccaggagtacttcagcaatacaaacacttcctctgcaggtacattatcaatgttttcaggtgcctttctctactgtgcaaaattgcggccttgagatcattttctctggatagattacactattggagagaagctgcatctggaatgagcagcttggcttattttctcgctaaggatacagttgatcattttaatacagtgatcaaacctttggtgtatctgtccatgttctactttttcaccggcccaagatctagcttagcggataattacattgttctactctgccttgtgtactgcgtaactggtatagcctatgcattagcaatcttctttgaccaaggtgcagcccaactgttatcagtccttcttcctgttgttttgactcttacagcaacacagcctcaggatagtgaaattctaaagattttggccaatttatgctatcctaagtgggctttggaggcatttgtgattgcaaatgctgaaagctactcaggggtatggctaataactcgttgcgggacgcttttgaaaggtggctatgatcttcatgattggaatctttgtataactgtcttgatcatcactggtttagttagtcgtgtgatcgcattcttttgtatgctgatctttcagaagtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0008150 GO:0015399 GO:0015405 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0031224 GO:0042623 GO:0042626 GO:0043492 GO:0044425 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC_tran

Protein Analysis

1041

Amino Acids

116.14

Weight (kDa)

8.29

Isoelectric Point (pI)

40.7

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001624)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53390
fragaria_vesca	FvH4_6g32451 FvH4_7g18960 FvH4_7g18960
malus_domestica	MD00G1214200.v1.1
prunus_persica	Prupe.2G210600_v2.0.a1 Prupe.2G210600_v2.0.a1 Prupe.2G210600_v2.0.a1
pyrus_communis	pycom01g13180 pycom01g13190 pycom07g16600
rosa_chinensis	RchiOBHm_Chr1g0360271 RchiOBHm_Chr1g0362891 RchiOBHm_Chr2g0140691 RchiOBHm_Chr2g0140701
rosa_laevigata	RLG00000003015 RLG00000019892 RLG00000019893 RLG00000027614
rosa_multiflora	Rmu_co8315067.1_g000001 Rmu_sc0001502.1_g000011 Rmu_sc0003342.1_g000012 Rmu_sc0003342.1_g000013
rosa_roxburghii	Rroxscaffold_1G00043370 Rroxscaffold_2G00104570 Rroxscaffold_2G00104580 Rroxscaffold_3G00227580 Rroxscaffold_4G00293670 Rroxscaffold_5G00347780 Rroxscaffold_5G00347800
rosa_rugosa	Rorug01G0302100 Rorug02G0364100 Rorug02G0364100 Rorug03G0261700
rosa_samantha	Rh1AG185000 Rh1AG311300 Rh1BG274400 Rh1DG305200 Rh2AG327100 Rh2AG415900 Rh2BG425300 Rh2BG425400 Rh2DG435400 Rh4AG110400 Rh6DG223100 Rh7BG077900
rosa_wichuraiana	Rw1G027590 Rw2G034020 Rw2G034030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1607
AatII	GACGTC	1 cut(s)	1083
Acc36I	ACCTGC	1 cut(s)	2508
AccB1I	GGYRCC	1 cut(s)	2541
AccI	GTMKAC	1 cut(s)	2220
AccIII	TCCGGA	1 cut(s)	2161
AciI	CCGC	8 cut(s)	34, 295, 443, 1661, 2099, 2567, 2744, 3003
AclWI	GGATC	5 cut(s)	336, 859, 1168, 2101, 2159
AcoI	YGGCCR	4 cut(s)	292, 571, 1380, 2913
AcsI	RAATTY	8 cut(s)	452, 598, 1024, 1702, 1757, 1842, 2326, 2898
AcuI	CTGAAG	3 cut(s)	1212, 1781, 2477
AcyI	GRCGYC	1 cut(s)	1080
AfiI	CCNNNNNNNGG	5 cut(s)	1145, 1365, 1801, 1928, 1929
AflIII	ACRYGT	2 cut(s)	1274, 1864
AhlI	ACTAGT	1 cut(s)	824
AjnI	CCWGG	8 cut(s)	381, 550, 769, 1084, 1363, 1498, 2061, 2482
AjuI	GAANNNNNNNTTGG	2 cut(s)	395, 427
Alw21I	GWGCWC	3 cut(s)	1093, 1680, 1969
Alw26I	GTCTC	1 cut(s)	99
Alw44I	GTGCAC	2 cut(s)	1089, 1676
AlwI	GGATC	5 cut(s)	336, 859, 1168, 2101, 2159
AlwNI	CAGNNNCTG	3 cut(s)	351, 1016, 1535
Aor13HI	TCCGGA	1 cut(s)	2161
ApaLI	GTGCAC	2 cut(s)	1089, 1676
ApoI	RAATTY	8 cut(s)	452, 598, 1024, 1702, 1757, 1842, 2326, 2898
AspLEI	GCGC	2 cut(s)	491, 1456
AspS9I	GGNCC	7 cut(s)	45, 1229, 1351, 1523, 1792, 2074, 2726
AsuC2I	CCSGG	2 cut(s)	365, 713
AsuHPI	GGTGA	7 cut(s)	916, 1047, 1122, 1178, 1600, 2006, 2713
AvaII	GGWCC	2 cut(s)	1229, 1523
AxyI	CCTNAGG	2 cut(s)	1233, 2886
BaeGI	GKGCMC	2 cut(s)	1093, 1680
BaeI	ACNNNNGTAYC	2 cut(s)	1230, 1263
BalI	TGGCCA	3 cut(s)	573, 1382, 2915
BanI	GGYRCC	1 cut(s)	2541
BbsI	GAAGAC	2 cut(s)	171, 1200
Bbv12I	GWGCWC	3 cut(s)	1093, 1680, 1969
BccI	CCATC	5 cut(s)	549, 1147, 1408, 2238, 2380
BceAI	ACGGC	2 cut(s)	32, 978
BcgI	CGANNNNNNTGC	6 cut(s)	115, 149, 596, 630, 1614, 1648
BciT130I	CCWGG	8 cut(s)	383, 552, 771, 1086, 1365, 1500, 2063, 2484
BciVI	GTATCC	2 cut(s)	1231, 2650
BclI	TGATCA	3 cut(s)	2665, 2682, 3063
BcnI	CCSGG	2 cut(s)	365, 713
BcoDI	GTCTC	1 cut(s)	99
BcuI	ACTAGT	1 cut(s)	824
BfaI	CTAG	7 cut(s)	618, 825, 930, 1562, 1763, 2022, 2736
BfmI	CTRYAG	6 cut(s)	870, 1008, 1334, 1512, 1827, 2515
BfuAI	ACCTGC	1 cut(s)	2508
BfuI	GTATCC	2 cut(s)	1231, 2650
BglII	AGATCT	1 cut(s)	2732
BlpI	GCTNAGC	1 cut(s)	2740
BmcAI	AGTACT	3 cut(s)	883, 2293, 2490
Bme18I	GGWCC	2 cut(s)	1229, 1523
BmgT120I	GGNCC	7 cut(s)	45, 1229, 1351, 1523, 1792, 2074, 2726
BmiI	GGNNCC	6 cut(s)	380, 1524, 1896, 2075, 2370, 2543
BmsI	GCATC	7 cut(s)	61, 306, 1108, 1571, 2238, 2315, 2627
BpiI	GAAGAC	2 cut(s)	171, 1200
BpmI	CTGGAG	3 cut(s)	753, 1869, 2466
Bpu10I	CCTNAGC	1 cut(s)	2652
Bpu1102I	GCTNAGC	1 cut(s)	2740
BpuEI	CTTGAG	3 cut(s)	1337, 2197, 2593
BpuMI	CCSGG	2 cut(s)	365, 713
Bsa29I	ATCGAT	1 cut(s)	155
BsaAI	YACGTR	2 cut(s)	499, 1277
BsaBI	GATNNNNATC	1 cut(s)	3042
BsaHI	GRCGYC	1 cut(s)	1080
BsaJI	CCNNGG	9 cut(s)	711, 770, 1084, 1364, 1788, 1815, 1878, 2128, 2821
BsaWI	WCCGGW	3 cut(s)	2148, 2161, 2472
Bsc4I	CCNNNNNNNGG	5 cut(s)	1145, 1365, 1801, 1928, 1929
Bse118I	RCCGGY	1 cut(s)	2723
Bse1I	ACTGG	9 cut(s)	726, 739, 845, 948, 1489, 1597, 2323, 2791, 3076
Bse21I	CCTNAGG	2 cut(s)	1233, 2886
Bse8I	GATNNNNATC	1 cut(s)	3042
BseAI	TCCGGA	1 cut(s)	2161
BseBI	CCWGG	8 cut(s)	383, 552, 771, 1086, 1365, 1500, 2063, 2484
BseCI	ATCGAT	1 cut(s)	155
BseDI	CCNNGG	9 cut(s)	711, 770, 1084, 1364, 1788, 1815, 1878, 2128, 2821
BseGI	GGATG	5 cut(s)	560, 1099, 1586, 1921, 2253
BseJI	GATNNNNATC	1 cut(s)	3042
BseLI	CCNNNNNNNGG	5 cut(s)	1145, 1365, 1801, 1928, 1929
BseMII	CTCAG	9 cut(s)	334, 474, 869, 1224, 1463, 1964, 2280, 2900, 2991
BseNI	ACTGG	9 cut(s)	726, 739, 845, 948, 1489, 1597, 2323, 2791, 3076
BseRI	GAGGAG	1 cut(s)	810
BseSI	GKGCMC	2 cut(s)	1093, 1680
BseYI	CCCAGC	1 cut(s)	1535
BsgI	GTGCAG	2 cut(s)	1744, 2847
Bsh1285I	CGRYCG	1 cut(s)	159
BshNI	GGYRCC	1 cut(s)	2541
BshVI	ATCGAT	1 cut(s)	155
BsiEI	CGRYCG	1 cut(s)	159
BsiHKAI	GWGCWC	3 cut(s)	1093, 1680, 1969
BsiSI	CCGG	6 cut(s)	365, 713, 2149, 2162, 2473, 2724
BslFI	GGGAC	5 cut(s)	234, 693, 1067, 2126, 3019
BslI	CCNNNNNNNGG	5 cut(s)	1145, 1365, 1801, 1928, 1929
BsmAI	GTCTC	1 cut(s)	99
BsmFI	GGGAC	5 cut(s)	234, 693, 1067, 2126, 3019
BsmI	GAATGC	3 cut(s)	426, 1109, 3095
Bsp1286I	GDGCHC	3 cut(s)	1093, 1680, 1969
Bsp13I	TCCGGA	1 cut(s)	2161
Bsp1720I	GCTNAGC	1 cut(s)	2740
Bsp19I	CCATGG	1 cut(s)	1878
BspACI	CCGC	8 cut(s)	34, 295, 443, 1661, 2099, 2567, 2744, 3003
BspDI	ATCGAT	1 cut(s)	155
BspEI	TCCGGA	1 cut(s)	2161
BspHI	TCATGA	2 cut(s)	1282, 3034
BspLI	GGNNCC	6 cut(s)	380, 1524, 1896, 2075, 2370, 2543
BspMAI	CTGCAG	5 cut(s)	874, 1012, 1338, 1516, 2519
BspMI	ACCTGC	1 cut(s)	2508
BspPI	GGATC	5 cut(s)	336, 859, 1168, 2101, 2159
BspT107I	GGYRCC	1 cut(s)	2541
BsrFI	RCCGGY	1 cut(s)	2723
BsrI	ACTGG	9 cut(s)	726, 739, 845, 948, 1489, 1597, 2323, 2791, 3076
BssAI	RCCGGY	1 cut(s)	2723
BssECI	CCNNGG	9 cut(s)	711, 770, 1084, 1364, 1788, 1815, 1878, 2128, 2821
BssNAI	GTATAC	1 cut(s)	2221
BssNI	GRCGYC	1 cut(s)	1080
BssT1I	CCWWGG	5 cut(s)	1788, 1815, 1878, 2128, 2821
Bst1107I	GTATAC	1 cut(s)	2221
Bst2UI	CCWGG	8 cut(s)	383, 552, 771, 1086, 1365, 1500, 2063, 2484
Bst6I	CTCTTC	4 cut(s)	197, 891, 1692, 1951
BstACI	GRCGYC	1 cut(s)	1080
BstAPI	GCANNNNNTGC	3 cut(s)	974, 1016, 1115
BstBAI	YACGTR	2 cut(s)	499, 1277
BstC8I	GCNNGC	3 cut(s)	635, 1044, 2125
BstDSI	CCRYGG	1 cut(s)	1878
BstF5I	GGATG	5 cut(s)	560, 1099, 1586, 1921, 2253
BstHHI	GCGC	2 cut(s)	491, 1456
BstMAI	GTCTC	1 cut(s)	99
BstMCI	CGRYCG	1 cut(s)	159
BstMWI	GCNNNNNNNGC	8 cut(s)	13, 974, 1013, 1016, 1115, 1571, 2303, 2945
BstNI	CCWGG	8 cut(s)	383, 552, 771, 1086, 1365, 1500, 2063, 2484
BstNSI	RCATGY	1 cut(s)	587
BstSFI	CTRYAG	6 cut(s)	870, 1008, 1334, 1512, 1827, 2515
BstSLI	GKGCMC	2 cut(s)	1093, 1680
BstV2I	GAAGAC	2 cut(s)	171, 1200
BstX2I	RGATCY	2 cut(s)	328, 2732
BstXI	CCANNNNNNTGG	2 cut(s)	791, 1885
BstYI	RGATCY	2 cut(s)	328, 2732
BstZ17I	GTATAC	1 cut(s)	2221
Bsu15I	ATCGAT	1 cut(s)	155
Bsu36I	CCTNAGG	2 cut(s)	1233, 2886
BsuI	GTATCC	2 cut(s)	1231, 2650
BsuTUI	ATCGAT	1 cut(s)	155
BtgI	CCRYGG	1 cut(s)	1878
BtsCI	GGATG	5 cut(s)	560, 1099, 1586, 1921, 2253
BtsIMutI	CAGTG	8 cut(s)	719, 941, 1698, 1720, 1740, 1945, 2685, 3069
BveI	ACCTGC	1 cut(s)	2508
Cac8I	GCNNGC	3 cut(s)	635, 1044, 2125
CaiI	CAGNNNCTG	3 cut(s)	351, 1016, 1535
CciI	TCATGA	2 cut(s)	1282, 3034
CfoI	GCGC	2 cut(s)	491, 1456
Cfr10I	RCCGGY	1 cut(s)	2723
Cfr13I	GGNCC	7 cut(s)	45, 1229, 1351, 1523, 1792, 2074, 2726
ClaI	ATCGAT	1 cut(s)	155
CseI	GACGC	2 cut(s)	1022, 3016
EaeI	YGGCCR	4 cut(s)	292, 571, 1380, 2913
Eam1104I	CTCTTC	4 cut(s)	197, 891, 1692, 1951
EarI	CTCTTC	4 cut(s)	197, 891, 1692, 1951
Eco130I	CCWWGG	5 cut(s)	1788, 1815, 1878, 2128, 2821
Eco147I	AGGCCT	2 cut(s)	1408, 2127
Eco47I	GGWCC	2 cut(s)	1229, 1523
Eco57I	CTGAAG	3 cut(s)	1212, 1781, 2477
Eco81I	CCTNAGG	2 cut(s)	1233, 2886
EcoO109I	RGGNCCY	2 cut(s)	1351, 2074
EcoRII	CCWGG	8 cut(s)	381, 550, 769, 1084, 1363, 1498, 2061, 2482
EcoT14I	CCWWGG	5 cut(s)	1788, 1815, 1878, 2128, 2821
EcoT22I	ATGCAT	3 cut(s)	428, 2032, 2803
ErhI	CCWWGG	5 cut(s)	1788, 1815, 1878, 2128, 2821
FalI	AAGNNNNNCTT	2 cut(s)	2061, 2093
FaqI	GGGAC	5 cut(s)	234, 693, 1067, 2126, 3019
FauI	CCCGC	1 cut(s)	2996
FauNDI	CATATG	1 cut(s)	806
FbaI	TGATCA	3 cut(s)	2665, 2682, 3063
FblI	GTMKAC	1 cut(s)	2220
FokI	GGATG	5 cut(s)	567, 1086, 1593, 1928, 2260
FspBI	CTAG	7 cut(s)	618, 825, 930, 1562, 1763, 2022, 2736
GlaI	GCGC	2 cut(s)	490, 1455
GsaI	CCCAGC	1 cut(s)	1539
GsuI	CTGGAG	3 cut(s)	753, 1869, 2466
HapII	CCGG	6 cut(s)	365, 713, 2149, 2162, 2473, 2724
HgaI	GACGC	2 cut(s)	1022, 3016
HhaI	GCGC	2 cut(s)	491, 1456
Hin1I	GRCGYC	1 cut(s)	1080
Hin6I	GCGC	2 cut(s)	489, 1454
HinP1I	GCGC	2 cut(s)	489, 1454
HincII	GTYRAC	2 cut(s)	589, 2137
HindII	GTYRAC	2 cut(s)	589, 2137
HindIII	AAGCTT	1 cut(s)	1980
HinfI	GANTC	8 cut(s)	419, 577, 1160, 1644, 1784, 2429, 2866, 3043
HpaII	CCGG	6 cut(s)	365, 713, 2149, 2162, 2473, 2724
HphI	GGTGA	7 cut(s)	916, 1047, 1122, 1178, 1600, 2006, 2713
Hpy188I	TCNGA	9 cut(s)	13, 484, 604, 879, 1395, 1413, 1800, 2243, 3120
Hpy99I	CGWCG	1 cut(s)	697
HpyAV	CCTTC	6 cut(s)	602, 1321, 1805, 1908, 1982, 2858
HpyCH4IV	ACGT	5 cut(s)	498, 1080, 1276, 1864, 2139
HpyF10VI	GCNNNNNNNGC	8 cut(s)	13, 974, 1013, 1016, 1115, 1571, 2303, 2945
HpySE526I	ACGT	5 cut(s)	498, 1080, 1276, 1864, 2139
Hsp92I	GRCGYC	1 cut(s)	1080
HspAI	GCGC	2 cut(s)	489, 1454
Kpn2I	TCCGGA	1 cut(s)	2161
Ksp22I	TGATCA	3 cut(s)	2665, 2682, 3063
LmnI	GCTCC	1 cut(s)	797
LweI	GCATC	7 cut(s)	61, 306, 1108, 1571, 2238, 2315, 2627
MaeI	CTAG	7 cut(s)	618, 825, 930, 1562, 1763, 2022, 2736
MaeII	ACGT	5 cut(s)	498, 1080, 1276, 1864, 2139
MaeIII	GTNAC	7 cut(s)	644, 1270, 1480, 1588, 1765, 2194, 2782
MfeI	CAATTG	3 cut(s)	1242, 1575, 2331
MflI	RGATCY	2 cut(s)	328, 2732
MhlI	GDGCHC	3 cut(s)	1093, 1680, 1969
MlsI	TGGCCA	3 cut(s)	573, 1382, 2915
MluNI	TGGCCA	3 cut(s)	573, 1382, 2915
MlyI	GAGTC	2 cut(s)	1793, 2860
MmeI	TCCRAC	4 cut(s)	829, 887, 1801, 1914
Mox20I	TGGCCA	3 cut(s)	573, 1382, 2915
Mph1103I	ATGCAT	3 cut(s)	428, 2032, 2803
MroI	TCCGGA	1 cut(s)	2161
MscI	TGGCCA	3 cut(s)	573, 1382, 2915
MseI	TTAA	5 cut(s)	174, 390, 1374, 1428, 2673
MslI	CAYNNNNRTG	4 cut(s)	789, 1104, 1883, 2003
Msp20I	TGGCCA	3 cut(s)	573, 1382, 2915
MspA1I	CMGCKG	1 cut(s)	2099
MspI	CCGG	6 cut(s)	365, 713, 2149, 2162, 2473, 2724
MunI	CAATTG	3 cut(s)	1242, 1575, 2331
Mva1269I	GAATGC	3 cut(s)	426, 1109, 3095
MvaI	CCWGG	8 cut(s)	383, 552, 771, 1086, 1365, 1500, 2063, 2484
MwoI	GCNNNNNNNGC	8 cut(s)	13, 974, 1013, 1016, 1115, 1571, 2303, 2945
NciI	CCSGG	2 cut(s)	365, 713
NcoI	CCATGG	1 cut(s)	1878
NdeI	CATATG	1 cut(s)	806
NlaIV	GGNNCC	6 cut(s)	380, 1524, 1896, 2075, 2370, 2543
NmuCI	GTSAC	3 cut(s)	644, 1588, 1765
NsiI	ATGCAT	3 cut(s)	428, 2032, 2803
NspI	RCATGY	1 cut(s)	587
PagI	TCATGA	2 cut(s)	1282, 3034
PceI	AGGCCT	2 cut(s)	1408, 2127
PcsI	WCGNNNNNNNCGW	1 cut(s)	94
PctI	GAATGC	3 cut(s)	426, 1109, 3095
PfeI	GAWTC	6 cut(s)	419, 577, 1160, 1644, 2429, 3043
PfoI	TCCNGGA	1 cut(s)	2482
Ple19I	CGATCG	1 cut(s)	159
PleI	GAGTC	2 cut(s)	1792, 2860
PpsI	GAGTC	2 cut(s)	1792, 2860
Ppu21I	YACGTR	2 cut(s)	499, 1277
PsiI	TTATAA	1 cut(s)	1607
Psp6I	CCWGG	8 cut(s)	381, 550, 769, 1084, 1363, 1498, 2061, 2482
PspFI	CCCAGC	1 cut(s)	1535
PspGI	CCWGG	8 cut(s)	381, 550, 769, 1084, 1363, 1498, 2061, 2482
PspN4I	GGNNCC	6 cut(s)	380, 1524, 1896, 2075, 2370, 2543
PspPI	GGNCC	7 cut(s)	45, 1229, 1351, 1523, 1792, 2074, 2726
PstI	CTGCAG	5 cut(s)	874, 1012, 1338, 1516, 2519
PstNI	CAGNNNCTG	3 cut(s)	351, 1016, 1535
PsuI	RGATCY	2 cut(s)	328, 2732
PvuI	CGATCG	1 cut(s)	159
RseI	CAYNNNNRTG	4 cut(s)	789, 1104, 1883, 2003
SaqAI	TTAA	5 cut(s)	174, 390, 1374, 1428, 2673
Sau96I	GGNCC	7 cut(s)	45, 1229, 1351, 1523, 1792, 2074, 2726
ScaI	AGTACT	3 cut(s)	883, 2293, 2490
SchI	GAGTC	2 cut(s)	1793, 2860
SduI	GDGCHC	3 cut(s)	1093, 1680, 1969
SfaNI	GCATC	7 cut(s)	61, 306, 1108, 1571, 2238, 2315, 2627
SfcI	CTRYAG	6 cut(s)	870, 1008, 1334, 1512, 1827, 2515
SinI	GGWCC	2 cut(s)	1229, 1523
SmiMI	CAYNNNNRTG	4 cut(s)	789, 1104, 1883, 2003
SmlI	CTYRAG	3 cut(s)	1316, 2212, 2572
SmoI	CTYRAG	3 cut(s)	1316, 2212, 2572
SpeI	ACTAGT	1 cut(s)	824
SseBI	AGGCCT	2 cut(s)	1408, 2127
SsiI	CCGC	8 cut(s)	34, 295, 443, 1661, 2099, 2567, 2744, 3003
SspI	AATATT	2 cut(s)	1390, 2347
SspMI	CTAG	7 cut(s)	618, 825, 930, 1562, 1763, 2022, 2736
StuI	AGGCCT	2 cut(s)	1408, 2127
StyI	CCWWGG	5 cut(s)	1788, 1815, 1878, 2128, 2821
TaiI	ACGT	5 cut(s)	501, 1083, 1279, 1867, 2142
TaqI	TCGA	6 cut(s)	88, 97, 155, 195, 207, 1782
TaqII	GACCGA	1 cut(s)	183
TatI	WGTACW	5 cut(s)	881, 2056, 2291, 2488, 2775
TauI	GCSGC	3 cut(s)	297, 1663, 2570
TfiI	GAWTC	6 cut(s)	419, 577, 1160, 1644, 2429, 3043
Tru1I	TTAA	5 cut(s)	174, 390, 1374, 1428, 2673
Tru9I	TTAA	5 cut(s)	174, 390, 1374, 1428, 2673
TscAI	CASTG	8 cut(s)	726, 948, 1698, 1720, 1740, 1945, 2685, 3076
TseFI	GTSAC	3 cut(s)	644, 1588, 1765
Tsp45I	GTSAC	3 cut(s)	644, 1588, 1765
TspDTI	ATGAA	9 cut(s)	190, 464, 525, 1635, 1770, 1932, 2243, 2352, 3023
TspGWI	ACGGA	3 cut(s)	681, 1515, 1695
TspRI	CASTG	8 cut(s)	726, 948, 1698, 1720, 1740, 1945, 2685, 3076
VneI	GTGCAC	2 cut(s)	1089, 1676
VpaK11BI	GGWCC	2 cut(s)	1229, 1523
XapI	RAATTY	8 cut(s)	452, 598, 1024, 1702, 1757, 1842, 2326, 2898
XceI	RCATGY	1 cut(s)	587
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1930
XmiI	GTMKAC	1 cut(s)	2220
XspI	CTAG	7 cut(s)	618, 825, 930, 1562, 1763, 2022, 2736
ZraI	GACGTC	1 cut(s)	1081
ZrmI	AGTACT	3 cut(s)	883, 2293, 2490
Zsp2I	ATGCAT	3 cut(s)	428, 2032, 2803

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.