Rroxscaffold_4G00293670

ABC transporter G family member

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
Physical Location & Seq
Reverse (-)
13885238 .. 13892562
7325 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00293670.1

Sequence Viewer

Length: 3375 bp
ATGAGCTTCAGGAAGCTCAAAGCTTCAAACTTTGGCTCATTTATTTTACTGGGTGTCTTAGCTTTGAGCTTGGTTCACTTGGTGCAGAGCCAAGATGTGGATGACTATGATGGAATTGACAACCCTGCGGTTCTTCCATTGATCACTCAGATTGTGTATGGAAGAATTTCAAATGTTACAGCAGTTCTCAGTAGGGAGATTAGCAATCGTTCCAGCTTCTGTGTGAAAGACCCGGAAGCTGATTGGAACCAGGCATTTAATTTTTCGAATAATTTGGAGTTCTTAACTTCATGCATTCAAAAGACTAAAGGAGATATTATGCGGCGCTTGTGTACAGCAGCAGAGATGAAGTTTTATTTCAACAATTTCTTTGTAAAGGCTGAGAGTGCAAATTACTTGAAACCTAACCAGAACTGTAATTTAACCTCCTGGGTTTCTGGGTGTGAGCCAGGATGGGCTTGTAGTGTTGGCCAAGATCAGCAGGTAGACCTCAAAAATGCACAGGACGTGCCTCCCAGAACTCAGAACTGCCAGCCTTGTTGTGAGGGTTTCTTTTGTCCCCATGGTCTCACATGCATGATACCTTGCCCATCGGGTTCTTACTGTCCCATGGCAACCCTGAACAGAGCAACCGGTATTTGTGAACCGTACATTTACCAGCTACCTCCTGGGCAACCAAACCATACTTGTGGAGGAGCAAATATATGGGCTGATGTTGTTAGTAGTGGTGAATTATTCTGTTCAGCTGGATCATATTGTCCAACCACTGTGAAAAGAATTCCTTGTAGTAGTGGACATTACTGCCGGATGGGTTCTACAGATGAGAAACGCTGTTTCAAGTTGACTTCCTGTGATGCAAACACTGCAAATCAAAATATTCATGCATACGGGATAATGCTTATTGCAGCTTTGATCACTCTGCTGCTCATTATTTACAATTGTTCTGACCAAGTACTCATCACTAGGGGGAGGAGACTGGCCAAATCTCGGGAGAAAGCAGCCAAAAGTGCAAGGGAAATGGCAAAAGCACGCCAAAGATGGAAAGGTGCAAAAGATGCTGCTAAGAAGCATGCAAGTGGTTTGCAAGCTCATTTATCACGCACATTTTCTCGGAAAAAGGACACCCAAGATCCTGAGAAACTTAAGATTTTGAATGAGCCAAAACCAGACATGGATGATGATCTGCCTACACCTCCACATCCAAGTAGATCAAATGTCTCACCATCCACATCTGTGCCACCAAAGGGAAAGAAAAAGGAACCTAGTGAGCTCATGCAGATTCTGCGTAAAATTGAAGATGACCCGGAGAATTATAAAGGTTTCAGTATTGGAGGTGAGGACACAAATGTAGGAAATGTGCCGAAAGGAAAGCAAATACATACTCATACACAAATCTTCAATTATGCTTATGCTCAGATTGAGAAAGAGAAGGCTCAGCAGCAAGACTACAAGGACCTTACCTTCTCTGGGGTGGTTAAAATGGCTACTAACAATGAAGTACGGAAAAGGCCTCTAATTGAGATTTCTTTCAAGGAGCTTACACTTACTTTGAAATCAAAAAATAAGCATCTACTGAGGTGTGTAACTGGTAAAATAAAGCCCGGCCGCATTACTGCAGTCATGGGTCCATCAGGGGCTGGAAAAACAACATTTCTTTCTGCCCTAGCTGGAAAAGCGATTGGATGCAATATGACTGGTTTAATTCTTGTAAATGGGAGGAATGTATCAATCCATTCATATAAGAAAATCATAGGTTTTGTGCCACAAGATGATATTGTGCATGGAAACTTGACTGTGGAAGAGAATTTATGGTTCAGTGCAAAGTGCAGTTTCTCATCAACCTTTACTGAAAGGTTATCAGCGGACTTATCAAAACCAGATAAATTTCTAGTAGTTGAAAGAGCTATCGATTCCTTAGGGCTCCAGACGGTACGTGATTCCTTGGTGGGAACAGTAGAGAAGCGAGGGATATCTGGAGGCCAGAGGAAACGTGTAAATGTTGGTTTGGAAATGGTTATGGAACCTTCACTTTTGATTTTGGATGAACCCACATCTGGTTTGGACAGTGCCTCTTCTCAGCTACTTCTTAGAGCACTTAGACGGGAAGCTCTTGAAGGGGTAAACATCTGCATGGTGGTTCACCAACCTAGCTATGCCTTGTTCAAGATGTTTGATGAGTTAGTACTCCTGGCAAAAGGTGGCCTAACTGTCTATCATGGATCAGCAAAGCAAGTAGAAGAATACTTTTCAAGCCTTGGGATCAATGTCCCAGACCGCATCAACCCTCCCGACCACTACATTGACATTTTGGAGGGTATGGTAACAACAGAAAGAAGTTCAGGAGTGAATTATAGAGATCTTCCCCTGAGATGGATGCTTTATAACGGCTACTCAGTACCCCCCGATATGAGGCCGAGTGCTGCTCAACTTGAATTGCCCTCAATGGATGAAAATTTAATTCATGAAACTAATCCTGCTGGTGCTCAGATAGAGGAACAATCTTTTGCTGAAGAGTTATGGCAAGATGTAAGAACTAATGTGGAGCTGCATCGTGAGAAGATACATCTCAATTTCTTGAAATCTAAGGATATGTCTAACAGAAGAACTCCAGGTGTATTTCTGCAATACAGATACTTCGTAGGAAGACTTGGTAAGCAGAGACTTCGAGAAGCTCGGATGCAGGCAGTAGATTATTTGATTTTATTACTTGCTGGAGCCTGCTTAGGATCACTTGCAAAAGTGAGCGATCAGAACTTTGGTGCACTTGGTTACACATACACCATCATTGCAGTTTCTCTACTGTGTAAGATTGCGGCTTTGAGATCATTTTCTCTGGATAGATTACAATATTGGAGAGAGAGCGCATCTGGGATGAGCAGCTTGGCTTATTTTCTTGCTAAGGATACAGTCGACCATTTTAATACATTGATCAAACCTTTCGTGTATCTGTCCATGTTCTACTTCTTCACCAACCCAAGATCTAGCTTTGCAGATAATTATGTTGTTCTGCTCTGCCTTGTGTACTGTGTAACTGGCATAGCCTATGCACTAGCAATATTTTTCGAACAAGGTGCAGCCCAGCTATCATCGGTTCTCCTTCCAGTTGTTTTGACACTTATAGCAACACGGCCGCAAGATGGTCAGATTCTAAAGATTTTAGCCAATGTATGCTACCCTAAGTGGGCTTTGGAAGCATTTGTGATTGCAAATGCTGAAAGGTATTCTGGAGTATGGCTAATAACTCGGTGCGGGGCACTTTTGAAAAGTGGCTATAATCTGAATGATTGGAGTCTTTGTATAATAGTCCTCATCTTCACAGGGTTCGTTAGCCGTGTGATAGCTTTCCTTTGCATGGTGACTTTTCAGAAGAAGTGA

Protein Analysis

1124

Amino Acids

125.06

Weight (kDa)

8.85

Isoelectric Point (pI)

38.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_tran PF00005 528 - 685 3.7e-24 ABC transporter
ABC2_membrane_7 PF19055 714 - 1124 8.5e-225 ABC-2 type transporter
ABC2_membrane PF01061 880 - 1068 8.5e-08 ABC-2 type transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1314, 2382
Acc36I ACCTGC 1 cut(s) 472
AccB7I CCANNNNNTGG 1 cut(s) 97
AccI GTMKAC 2 cut(s) 486, 2910
AciI CCGC 8 cut(s) 128, 322, 1606, 1862, 2275, 2813, 3131, 3249
AclWI GGATC 5 cut(s) 757, 1124, 2227, 2267, 2734
AcoI YGGCCR 4 cut(s) 469, 978, 1603, 3128
AcsI RAATTY 5 cut(s) 165, 777, 1804, 1883, 2452
AcuI CTGAAG 1 cut(s) 2529
AdeI CACNNNGTG 1 cut(s) 82
AfaI GTAC 8 cut(s) 334, 650, 954, 1500, 1932, 2184, 2397, 3023
AflII CTTAAG 1 cut(s) 1142
AflIII ACRYGT 1 cut(s) 1990
AgeI ACCGGT 1 cut(s) 632
AjiI CACGTC 1 cut(s) 508
AjnI CCWGG 6 cut(s) 249, 428, 448, 667, 2187, 2608
AleI CACNNNNGTG 1 cut(s) 1232
Alw21I GWGCWC 4 cut(s) 1272, 2095, 2485, 2764
Alw26I GTCTC 4 cut(s) 572, 967, 1222, 2653
Alw44I GTGCAC 1 cut(s) 2760
AlwI GGATC 5 cut(s) 757, 1124, 2227, 2267, 2734
AlwNI CAGNNNCTG 3 cut(s) 219, 1282, 1637
Ama87I CYCGRG 1 cut(s) 987
AoxI GGCC 8 cut(s) 469, 978, 1508, 1603, 1978, 2200, 2411, 3128
ApaLI GTGCAC 1 cut(s) 2760
ApoI RAATTY 5 cut(s) 165, 777, 1804, 1883, 2452
AsiGI ACCGGT 1 cut(s) 632
Asp700I GAANNNNTTC 1 cut(s) 166
AspLEI GCGC 2 cut(s) 327, 2864
AspS9I GGNCC 2 cut(s) 1453, 1625
AsuC2I CCSGG 3 cut(s) 233, 1304, 1602
AsuHPI GGTGA 6 cut(s) 740, 1212, 1346, 2132, 2959, 3367
AsuII TTCGAA 2 cut(s) 266, 3063
AvaI CYCGRG 1 cut(s) 987
AvaII GGWCC 2 cut(s) 1453, 1625
AxyI CCTNAGG 1 cut(s) 1915
BaeGI GKGCMC 2 cut(s) 2764, 3256
BalI TGGCCA 2 cut(s) 471, 980
BanII GRGCYC 2 cut(s) 1272, 1923
BbsI GAAGAC 1 cut(s) 2650
Bbv12I GWGCWC 4 cut(s) 1272, 2095, 2485, 2764
BceAI ACGGC 3 cut(s) 2401, 3143, 3315
BcgI CGANNNNNNTGC 4 cut(s) 2645, 2679, 3053, 3087
BciT130I CCWGG 6 cut(s) 251, 430, 450, 669, 2189, 2610
BciVI GTATCC 1 cut(s) 2896
BclI TGATCA 3 cut(s) 141, 912, 2928
BcnI CCSGG 3 cut(s) 233, 1304, 1602
BcoDI GTCTC 4 cut(s) 572, 967, 1222, 2653
BfaI CTAG 7 cut(s) 963, 1263, 1664, 1889, 2148, 2982, 3050
BfmI CTRYAG 2 cut(s) 816, 1614
BfoI RGCGCY 1 cut(s) 328
BfrI CTTAAG 1 cut(s) 1142
BfuAI ACCTGC 1 cut(s) 472
BfuI GTATCC 1 cut(s) 2896
BglII AGATCT 2 cut(s) 2356, 2978
BlpI GCTNAGC 1 cut(s) 1434
BmcAI AGTACT 2 cut(s) 954, 2184
Bme1390I CCNGG 9 cut(s) 233, 251, 430, 450, 669, 1304, 1602, 2189, 2610
Bme18I GGWCC 2 cut(s) 1453, 1625
BmeT110I CYCGRG 1 cut(s) 987
BmgBI CACGTC 1 cut(s) 508
BmgT120I GGNCC 2 cut(s) 1453, 1625
BmiI GGNNCC 6 cut(s) 248, 1260, 1626, 1922, 2022, 2716
BmrFI CCNGG 9 cut(s) 233, 251, 430, 450, 669, 1304, 1602, 2189, 2610
BmrI ACTGGG 1 cut(s) 59
BmsI GCATC 9 cut(s) 844, 1045, 1576, 1673, 2286, 2364, 2557, 2667, 2873
BmuI ACTGGG 1 cut(s) 59
BpiI GAAGAC 1 cut(s) 2650
BplI GAGNNNNNCTC 2 cut(s) 2407, 2439
BpmI CTGGAG 5 cut(s) 1907, 1995, 2592, 2733, 3246
Bpu10I CCTNAGC 2 cut(s) 2722, 2898
Bpu1102I GCTNAGC 1 cut(s) 1434
Bpu14I TTCGAA 2 cut(s) 266, 3063
BpuMI CCSGG 3 cut(s) 233, 1304, 1602
Bsa29I ATCGAT 1 cut(s) 1908
BsaAI YACGTR 1 cut(s) 1934
BsaBI GATNNNNATC 1 cut(s) 1179
BsaI GGTCTC 1 cut(s) 572
BsaJI CCNNGG 6 cut(s) 429, 562, 609, 668, 1941, 2254
BsaWI WCCGGW 1 cut(s) 632
BsaXI ACNNNNNCTCC 2 cut(s) 3280, 3310
Bse118I RCCGGY 1 cut(s) 632
Bse1I ACTGG 6 cut(s) 54, 981, 1591, 1699, 3037, 3101
Bse21I CCTNAGG 1 cut(s) 1915
Bse3DI GCAATG 1 cut(s) 2784
Bse8I GATNNNNATC 1 cut(s) 1179
BseBI CCWGG 6 cut(s) 251, 430, 450, 669, 2189, 2610
BseCI ATCGAT 1 cut(s) 1908
BseDI CCNNGG 6 cut(s) 429, 562, 609, 668, 1941, 2254
BseJI GATNNNNATC 1 cut(s) 1179
BseMI GCAATG 1 cut(s) 2784
BseNI ACTGG 6 cut(s) 54, 981, 1591, 1699, 3037, 3101
BseRI GAGGAG 2 cut(s) 708, 985
BseSI GKGCMC 2 cut(s) 2764, 3256
BseX3I CGGCCG 2 cut(s) 1603, 3128
BseYI CCCAGC 1 cut(s) 3078
BsgI GTGCAG 3 cut(s) 104, 1846, 3093
Bsh1285I CGRYCG 2 cut(s) 1606, 3131
BshFI GGCC 8 cut(s) 471, 980, 1510, 1605, 1980, 2202, 2413, 3130
BshTI ACCGGT 1 cut(s) 632
BshVI ATCGAT 1 cut(s) 1908
BsiEI CGRYCG 2 cut(s) 1606, 3131
BsiHKAI GWGCWC 4 cut(s) 1272, 2095, 2485, 2764
BsiHKCI CYCGRG 1 cut(s) 987
BsiSI CCGG 5 cut(s) 233, 633, 805, 1304, 1602
BslFI GGGAC 3 cut(s) 543, 591, 2252
BsmAI GTCTC 4 cut(s) 572, 967, 1222, 2653
BsmFI GGGAC 3 cut(s) 543, 591, 2252
BsmI GAATGC 1 cut(s) 294
BsnI GGCC 8 cut(s) 471, 980, 1510, 1605, 1980, 2202, 2413, 3130
Bso31I GGTCTC 1 cut(s) 572
BsoBI CYCGRG 1 cut(s) 987
Bsp119I TTCGAA 2 cut(s) 266, 3063
Bsp1286I GDGCHC 6 cut(s) 1272, 1923, 2095, 2485, 2764, 3256
Bsp1407I TGTACA 1 cut(s) 332
Bsp1720I GCTNAGC 1 cut(s) 1434
Bsp19I CCATGG 2 cut(s) 562, 609
BspACI CCGC 8 cut(s) 128, 322, 1606, 1862, 2275, 2813, 3131, 3249
BspANI GGCC 8 cut(s) 471, 980, 1510, 1605, 1980, 2202, 2413, 3130
BspDI ATCGAT 1 cut(s) 1908
BspHI TCATGA 1 cut(s) 2461
BspLI GGNNCC 6 cut(s) 248, 1260, 1626, 1922, 2022, 2716
BspMAI CTGCAG 1 cut(s) 1618
BspMI ACCTGC 1 cut(s) 472
BspPI GGATC 5 cut(s) 757, 1124, 2227, 2267, 2734
BspT104I TTCGAA 2 cut(s) 266, 3063
BspTI CTTAAG 1 cut(s) 1142
BspTNI GGTCTC 1 cut(s) 572
BsrDI GCAATG 1 cut(s) 2784
BsrFI RCCGGY 1 cut(s) 632
BsrGI TGTACA 1 cut(s) 332
BsrI ACTGG 6 cut(s) 54, 981, 1591, 1699, 3037, 3101
BssAI RCCGGY 1 cut(s) 632
BssECI CCNNGG 6 cut(s) 429, 562, 609, 668, 1941, 2254
BssT1I CCWWGG 4 cut(s) 562, 609, 1941, 2254
Bst2UI CCWGG 6 cut(s) 251, 430, 450, 669, 2189, 2610
Bst6I CTCTTC 3 cut(s) 1794, 2077, 2505
BstAFI CTTAAG 1 cut(s) 1142
BstAPI GCANNNNNTGC 3 cut(s) 863, 1055, 1282
BstAUI TGTACA 1 cut(s) 332
BstBAI YACGTR 1 cut(s) 1934
BstBI TTCGAA 2 cut(s) 266, 3063
BstC8I GCNNGC 6 cut(s) 533, 1030, 1071, 1086, 2682, 2719
BstDSI CCRYGG 2 cut(s) 562, 609
BstH2I RGCGCY 1 cut(s) 328
BstHHI GCGC 2 cut(s) 327, 2864
BstMAI GTCTC 4 cut(s) 572, 967, 1222, 2653
BstMCI CGRYCG 2 cut(s) 1606, 3131
BstMWI GCNNNNNNNGC 7 cut(s) 386, 863, 1007, 1055, 1282, 1673, 3191
BstNI CCWGG 6 cut(s) 251, 430, 450, 669, 2189, 2610
BstNSI RCATGY 2 cut(s) 576, 1073
BstSCI CCNGG 9 cut(s) 231, 249, 428, 448, 667, 1302, 1600, 2187, 2608
BstSFI CTRYAG 2 cut(s) 816, 1614
BstSLI GKGCMC 2 cut(s) 2764, 3256
BstV2I GAAGAC 1 cut(s) 2650
BstX2I RGATCY 3 cut(s) 1129, 2356, 2978
BstXI CCANNNNNNTGG 1 cut(s) 689
BstYI RGATCY 3 cut(s) 1129, 2356, 2978
BstZI CGGCCG 2 cut(s) 1603, 3128
Bsu15I ATCGAT 1 cut(s) 1908
Bsu36I CCTNAGG 1 cut(s) 1915
BsuI GTATCC 1 cut(s) 2896
BsuRI GGCC 8 cut(s) 471, 980, 1510, 1605, 1980, 2202, 2413, 3130
BsuTUI ATCGAT 1 cut(s) 1908
BtgI CCRYGG 2 cut(s) 562, 609
BtrI CACGTC 1 cut(s) 508
BtsI GCAGTG 1 cut(s) 861
BtsIMutI CAGTG 4 cut(s) 765, 861, 1822, 2071
BveI ACCTGC 1 cut(s) 472
Cac8I GCNNGC 6 cut(s) 533, 1030, 1071, 1086, 2682, 2719
CaiI CAGNNNCTG 3 cut(s) 219, 1282, 1637
CciI TCATGA 1 cut(s) 2461
CfoI GCGC 2 cut(s) 327, 2864
Cfr10I RCCGGY 1 cut(s) 632
Cfr13I GGNCC 2 cut(s) 1453, 1625
ClaI ATCGAT 1 cut(s) 1908
Csp6I GTAC 8 cut(s) 333, 649, 953, 1499, 1931, 2183, 2396, 3022
CspAI ACCGGT 1 cut(s) 632
CviQI GTAC 8 cut(s) 333, 649, 953, 1499, 1931, 2183, 2396, 3022
DraIII CACNNNGTG 1 cut(s) 82
EaeI YGGCCR 4 cut(s) 469, 978, 1603, 3128
EagI CGGCCG 2 cut(s) 1603, 3128
Eam1104I CTCTTC 3 cut(s) 1794, 2077, 2505
EarI CTCTTC 3 cut(s) 1794, 2077, 2505
Ecl136II GAGCTC 1 cut(s) 1270
EclXI CGGCCG 2 cut(s) 1603, 3128
Eco130I CCWWGG 4 cut(s) 562, 609, 1941, 2254
Eco147I AGGCCT 1 cut(s) 1510
Eco24I GRGCYC 2 cut(s) 1272, 1923
Eco31I GGTCTC 1 cut(s) 572
Eco32I GATATC 1 cut(s) 1971
Eco47I GGWCC 2 cut(s) 1453, 1625
Eco52I CGGCCG 2 cut(s) 1603, 3128
Eco53kI GAGCTC 1 cut(s) 1270
Eco57I CTGAAG 1 cut(s) 2529
Eco81I CCTNAGG 1 cut(s) 1915
Eco88I CYCGRG 1 cut(s) 987
EcoICRI GAGCTC 1 cut(s) 1270
EcoO109I RGGNCCY 1 cut(s) 1453
EcoRI GAATTC 1 cut(s) 777
EcoRII CCWGG 6 cut(s) 249, 428, 448, 667, 2187, 2608
EcoRV GATATC 1 cut(s) 1971
EcoT14I CCWWGG 4 cut(s) 562, 609, 1941, 2254
EcoT22I ATGCAT 3 cut(s) 296, 578, 886
EcoT38I GRGCYC 2 cut(s) 1272, 1923
ErhI CCWWGG 4 cut(s) 562, 609, 1941, 2254
FalI AAGNNNNNCTT 2 cut(s) 766, 798
FaqI GGGAC 3 cut(s) 543, 591, 2252
FauI CCCGC 1 cut(s) 3242
FbaI TGATCA 3 cut(s) 141, 912, 2928
FblI GTMKAC 2 cut(s) 486, 2910
FriOI GRGCYC 2 cut(s) 1272, 1923
FspBI CTAG 7 cut(s) 963, 1263, 1664, 1889, 2148, 2982, 3050
GlaI GCGC 2 cut(s) 326, 2863
GsaI CCCAGC 1 cut(s) 3082
GsuI CTGGAG 5 cut(s) 1907, 1995, 2592, 2733, 3246
HaeII RGCGCY 1 cut(s) 328
HaeIII GGCC 8 cut(s) 471, 980, 1510, 1605, 1980, 2202, 2413, 3130
HapII CCGG 5 cut(s) 233, 633, 805, 1304, 1602
HhaI GCGC 2 cut(s) 327, 2864
Hin6I GCGC 2 cut(s) 325, 2862
HinP1I GCGC 2 cut(s) 325, 2862
HincII GTYRAC 2 cut(s) 843, 2911
HindII GTYRAC 2 cut(s) 843, 2911
HindIII AAGCTT 1 cut(s) 21
HinfI GANTC 5 cut(s) 1279, 1910, 1937, 3145, 3289
HpaII CCGG 5 cut(s) 233, 633, 805, 1304, 1602
HphI GGTGA 6 cut(s) 740, 1212, 1346, 2132, 2959, 3367
HpyAV CCTTC 5 cut(s) 1423, 1471, 2034, 2108, 3107
HpyCH4IV ACGT 3 cut(s) 507, 1933, 1990
HpyF10VI GCNNNNNNNGC 7 cut(s) 386, 863, 1007, 1055, 1282, 1673, 3191
HpySE526I ACGT 3 cut(s) 507, 1933, 1990
HspAI GCGC 2 cut(s) 325, 2862
Ksp22I TGATCA 3 cut(s) 141, 912, 2928
LmnI GCTCC 5 cut(s) 695, 1534, 1926, 2542, 2714
LweI GCATC 9 cut(s) 844, 1045, 1576, 1673, 2286, 2364, 2557, 2667, 2873
MaeI CTAG 7 cut(s) 963, 1263, 1664, 1889, 2148, 2982, 3050
MaeII ACGT 3 cut(s) 507, 1933, 1990
MaeIII GTNAC 6 cut(s) 175, 1582, 2320, 2768, 3028, 3355
MfeI CAATTG 1 cut(s) 937
MflI RGATCY 3 cut(s) 1129, 2356, 2978
MhlI GDGCHC 6 cut(s) 1272, 1923, 2095, 2485, 2764, 3256
MlsI TGGCCA 2 cut(s) 471, 980
MluNI TGGCCA 2 cut(s) 471, 980
MlyI GAGTC 1 cut(s) 3298
MmeI TCCRAC 1 cut(s) 785
Mox20I TGGCCA 2 cut(s) 471, 980
Mph1103I ATGCAT 3 cut(s) 296, 578, 886
MroXI GAANNNNTTC 1 cut(s) 166
MscI TGGCCA 2 cut(s) 471, 980
MseI TTAA 8 cut(s) 258, 284, 422, 1143, 1476, 1700, 2456, 2919
MslI CAYNNNNRTG 5 cut(s) 575, 687, 1074, 1232, 2129
Msp20I TGGCCA 2 cut(s) 471, 980
MspA1I CMGCKG 2 cut(s) 746, 1862
MspCI CTTAAG 1 cut(s) 1142
MspI CCGG 5 cut(s) 233, 633, 805, 1304, 1602
MspR9I CCNGG 9 cut(s) 233, 251, 430, 450, 669, 1304, 1602, 2189, 2610
MunI CAATTG 1 cut(s) 937
Mva1269I GAATGC 1 cut(s) 294
MvaI CCWGG 6 cut(s) 251, 430, 450, 669, 2189, 2610
MwoI GCNNNNNNNGC 7 cut(s) 386, 863, 1007, 1055, 1282, 1673, 3191
NciI CCSGG 3 cut(s) 233, 1304, 1602
NcoI CCATGG 2 cut(s) 562, 609
NlaIV GGNNCC 6 cut(s) 248, 1260, 1626, 1922, 2022, 2716
NmeAIII GCCGAG 1 cut(s) 2439
NmuCI GTSAC 1 cut(s) 3355
NsiI ATGCAT 3 cut(s) 296, 578, 886
NspI RCATGY 2 cut(s) 576, 1073
NspV TTCGAA 2 cut(s) 266, 3063
OliI CACNNNNGTG 1 cut(s) 1232
PaeI GCATGC 1 cut(s) 1073
PagI TCATGA 1 cut(s) 2461
PceI AGGCCT 1 cut(s) 1510
PctI GAATGC 1 cut(s) 294
PdmI GAANNNNTTC 1 cut(s) 166
PfeI GAWTC 4 cut(s) 1279, 1910, 1937, 3145
PflMI CCANNNNNTGG 1 cut(s) 97
PinAI ACCGGT 1 cut(s) 632
PleI GAGTC 1 cut(s) 3297
PpsI GAGTC 1 cut(s) 3297
Ppu21I YACGTR 1 cut(s) 1934
PpuMI RGGWCCY 1 cut(s) 1453
PsiI TTATAA 2 cut(s) 1314, 2382
Psp124BI GAGCTC 1 cut(s) 1272
Psp5II RGGWCCY 1 cut(s) 1453
Psp6I CCWGG 6 cut(s) 249, 428, 448, 667, 2187, 2608
PspFI CCCAGC 1 cut(s) 3078
PspGI CCWGG 6 cut(s) 249, 428, 448, 667, 2187, 2608
PspN4I GGNNCC 6 cut(s) 248, 1260, 1626, 1922, 2022, 2716
PspPI GGNCC 2 cut(s) 1453, 1625
PspPPI RGGWCCY 1 cut(s) 1453
PstI CTGCAG 1 cut(s) 1618
PstNI CAGNNNCTG 3 cut(s) 219, 1282, 1637
PsuI RGATCY 3 cut(s) 1129, 2356, 2978
PvuII CAGCTG 1 cut(s) 746
RsaI GTAC 8 cut(s) 334, 650, 954, 1500, 1932, 2184, 2397, 3023
RsaNI GTAC 8 cut(s) 333, 649, 953, 1499, 1931, 2183, 2396, 3022
RseI CAYNNNNRTG 5 cut(s) 575, 687, 1074, 1232, 2129
SacI GAGCTC 1 cut(s) 1272
SalI GTCGAC 1 cut(s) 2909
SaqAI TTAA 8 cut(s) 258, 284, 422, 1143, 1476, 1700, 2456, 2919
Sau96I GGNCC 2 cut(s) 1453, 1625
ScaI AGTACT 2 cut(s) 954, 2184
SchI GAGTC 1 cut(s) 3298
ScrFI CCNGG 9 cut(s) 233, 251, 430, 450, 669, 1304, 1602, 2189, 2610
SduI GDGCHC 6 cut(s) 1272, 1923, 2095, 2485, 2764, 3256
SfaNI GCATC 9 cut(s) 844, 1045, 1576, 1673, 2286, 2364, 2557, 2667, 2873
SfcI CTRYAG 2 cut(s) 816, 1614
SfuI TTCGAA 2 cut(s) 266, 3063
SinI GGWCC 2 cut(s) 1453, 1625
SmiMI CAYNNNNRTG 5 cut(s) 575, 687, 1074, 1232, 2129
SmlI CTYRAG 1 cut(s) 1142
SmoI CTYRAG 1 cut(s) 1142
SphI GCATGC 1 cut(s) 1073
SseBI AGGCCT 1 cut(s) 1510
SsiI CCGC 8 cut(s) 128, 322, 1606, 1862, 2275, 2813, 3131, 3249
SspI AATATT 3 cut(s) 877, 2849, 3057
SspMI CTAG 7 cut(s) 963, 1263, 1664, 1889, 2148, 2982, 3050
SstI GAGCTC 1 cut(s) 1272
StuI AGGCCT 1 cut(s) 1510
StyD4I CCNGG 9 cut(s) 231, 249, 428, 448, 667, 1302, 1600, 2187, 2608
StyI CCWWGG 4 cut(s) 562, 609, 1941, 2254
TaiI ACGT 3 cut(s) 510, 1936, 1993
TaqI TCGA 5 cut(s) 266, 1908, 2665, 2910, 3063
TatI WGTACW 4 cut(s) 332, 952, 2182, 3021
TauI GCSGC 4 cut(s) 325, 1608, 2816, 3133
TfiI GAWTC 4 cut(s) 1279, 1910, 1937, 3145
Tru1I TTAA 8 cut(s) 258, 284, 422, 1143, 1476, 1700, 2456, 2919
Tru9I TTAA 8 cut(s) 258, 284, 422, 1143, 1476, 1700, 2456, 2919
TscAI CASTG 4 cut(s) 772, 868, 1822, 2071
TseFI GTSAC 1 cut(s) 3355
Tsp45I GTSAC 1 cut(s) 3355
TspDTI ATGAA 9 cut(s) 279, 362, 869, 1509, 1725, 2058, 2450, 2463, 2478
TspGWI ACGGA 1 cut(s) 1516
TspRI CASTG 4 cut(s) 772, 868, 1822, 2071
Van91I CCANNNNNTGG 1 cut(s) 97
Vha464I CTTAAG 1 cut(s) 1142
VneI GTGCAC 1 cut(s) 2760
VpaK11BI GGWCC 2 cut(s) 1453, 1625
XapI RAATTY 5 cut(s) 165, 777, 1804, 1883, 2452
XceI RCATGY 2 cut(s) 576, 1073
XcmI CCANNNNNNNNNTGG 2 cut(s) 665, 2056
XmiI GTMKAC 2 cut(s) 486, 2910
XmnI GAANNNNTTC 1 cut(s) 166
XspI CTAG 7 cut(s) 963, 1263, 1664, 1889, 2148, 2982, 3050
ZrmI AGTACT 2 cut(s) 954, 2184
Zsp2I ATGCAT 3 cut(s) 296, 578, 886
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.