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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G63240 |
| fragaria_vesca | FvH4_5g01860 FvH4_5g01860 FvH4_5g01860 FvH4_5g01860 FvH4_5g01911 FvH4_5g01911 |
| malus_domestica | MD06G1076800.v1.1 MD14G1098200.v1.1 |
| prunus_persica | Prupe.5G094800_v2.0.a1 Prupe.5G094800_v2.0.a1 Prupe.5G094800_v2.0.a1 Prupe.5G094800_v2.0.a1 Prupe.5G094800_v2.0.a1 |
| pyrus_communis | pycom06g07430 pycom06g07440 pycom14g09640 |
| rosa_chinensis | RchiOBHm_Chr7g0198611 RchiOBHm_Chr7g0198661 |
| rosa_laevigata | RLG00000003850 RLG00000003857 |
| rosa_multiflora | Rmu_co8077932.1_g000001 Rmu_co8274787.1_g000001 Rmu_co8506873.1_g000001 Rmu_sc0000220.1_g000017 Rmu_sc0004229.1_g000004 |
| rosa_roxburghii | Rroxscaffold_3G00257550 Rroxscaffold_3G00257620 |
| rosa_rugosa | Rorug07G0048500 Rorug07G0049000 Rorug07G0049100 Rorug07G0049100 |
| rosa_samantha | Rh4BG123200 Rh7AG172000 Rh7AG172600 Rh7BG175400 Rh7BG176100 Rh7CG181500 Rh7CG182000 Rh7DG174500 Rh7DG174900 Rh7DG175200 |
| rosa_wichuraiana | Rw7G015090 Rw7G015150 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 841, 1540 |
| AccI | GTMKAC | 1 cut(s) | 435 |
| AccII | CGCG | 1 cut(s) | 93 |
| AccIII | TCCGGA | 1 cut(s) | 280 |
| AciI | CCGC | 6 cut(s) | 32, 93, 255, 1154, 1186, 1417 |
| AclWI | GGATC | 5 cut(s) | 159, 630, 775, 805, 1553 |
| AcsI | RAATTY | 1 cut(s) | 523 |
| AcuI | CTGAAG | 2 cut(s) | 435, 1244 |
| AcyI | GRCGYC | 1 cut(s) | 36 |
| AdeI | CACNNNGTG | 1 cut(s) | 605 |
| AfaI | GTAC | 5 cut(s) | 167, 1080, 1424, 1572, 1615 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 63, 1484 |
| AhlI | ACTAGT | 1 cut(s) | 1616 |
| AjiI | CACGTC | 1 cut(s) | 928 |
| AjnI | CCWGG | 2 cut(s) | 819, 1447 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 284, 316 |
| AleI | CACNNNNGTG | 1 cut(s) | 939 |
| AluBI | AGCT | 7 cut(s) | 13, 659, 956, 1007, 1141, 1176, 1445 |
| AluI | AGCT | 7 cut(s) | 13, 659, 956, 1007, 1141, 1176, 1445 |
| Alw26I | GTCTC | 5 cut(s) | 245, 374, 591, 656, 1557 |
| AlwI | GGATC | 5 cut(s) | 159, 630, 775, 805, 1553 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 659, 1448 |
| Ama87I | CYCGRG | 1 cut(s) | 588 |
| Aor13HI | TCCGGA | 1 cut(s) | 280 |
| AoxI | GGCC | 1 cut(s) | 266 |
| ApeKI | GCWGC | 1 cut(s) | 1442 |
| ApoI | RAATTY | 1 cut(s) | 523 |
| AsuC2I | CCSGG | 2 cut(s) | 445, 786 |
| AsuHPI | GGTGA | 1 cut(s) | 440 |
| AvaI | CYCGRG | 1 cut(s) | 588 |
| BaeGI | GKGCMC | 1 cut(s) | 1358 |
| BbsI | GAAGAC | 1 cut(s) | 1036 |
| BbvI | GCAGC | 1 cut(s) | 1454 |
| BccI | CCATC | 3 cut(s) | 1117, 1255, 1285 |
| BceAI | ACGGC | 2 cut(s) | 45, 253 |
| BciT130I | CCWGG | 2 cut(s) | 821, 1449 |
| BcnI | CCSGG | 2 cut(s) | 445, 786 |
| BcoDI | GTCTC | 5 cut(s) | 245, 374, 591, 656, 1557 |
| BcuI | ACTAGT | 1 cut(s) | 1616 |
| BfaI | CTAG | 6 cut(s) | 105, 713, 917, 1104, 1596, 1617 |
| BfmI | CTRYAG | 2 cut(s) | 78, 1113 |
| BfuAI | ACCTGC | 2 cut(s) | 841, 1540 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 49, 274 |
| BglII | AGATCT | 1 cut(s) | 1120 |
| BisI | GCNGC | 1 cut(s) | 1443 |
| BlsI | GCNGC | 1 cut(s) | 1444 |
| Bme1390I | CCNGG | 4 cut(s) | 445, 786, 821, 1449 |
| BmeT110I | CYCGRG | 1 cut(s) | 588 |
| BmgBI | CACGTC | 1 cut(s) | 928 |
| BmrFI | CCNGG | 4 cut(s) | 445, 786, 821, 1449 |
| BmsI | GCATC | 1 cut(s) | 1220 |
| BpiI | GAAGAC | 1 cut(s) | 1036 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 512, 544, 1391, 1423 |
| BpmI | CTGGAG | 1 cut(s) | 1051 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1008 |
| BpuEI | CTTGAG | 1 cut(s) | 182 |
| BpuMI | CCSGG | 2 cut(s) | 445, 786 |
| BsaBI | GATNNNNATC | 3 cut(s) | 621, 1210, 1464 |
| BsaHI | GRCGYC | 1 cut(s) | 36 |
| BsaI | GGTCTC | 1 cut(s) | 245 |
| BsaJI | CCNNGG | 3 cut(s) | 784, 1448, 1608 |
| BsaWI | WCCGGW | 1 cut(s) | 280 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 529, 559 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 63, 1484 |
| Bse1I | ACTGG | 2 cut(s) | 799, 1034 |
| Bse8I | GATNNNNATC | 3 cut(s) | 621, 1210, 1464 |
| BseAI | TCCGGA | 1 cut(s) | 280 |
| BseBI | CCWGG | 2 cut(s) | 821, 1449 |
| BseDI | CCNNGG | 3 cut(s) | 784, 1448, 1608 |
| BseGI | GGATG | 4 cut(s) | 289, 484, 1247, 1408 |
| BseJI | GATNNNNATC | 3 cut(s) | 621, 1210, 1464 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 63, 1484 |
| BseMII | CTCAG | 4 cut(s) | 617, 651, 983, 1022 |
| BseNI | ACTGG | 2 cut(s) | 799, 1034 |
| BseRI | GAGGAG | 2 cut(s) | 488, 537 |
| BseSI | GKGCMC | 1 cut(s) | 1358 |
| BseXI | GCAGC | 1 cut(s) | 1454 |
| Bsh1236I | CGCG | 1 cut(s) | 93 |
| Bsh1285I | CGRYCG | 1 cut(s) | 97 |
| BshFI | GGCC | 1 cut(s) | 268 |
| BsiEI | CGRYCG | 1 cut(s) | 97 |
| BsiHKCI | CYCGRG | 1 cut(s) | 588 |
| BsiSI | CCGG | 4 cut(s) | 44, 281, 444, 786 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 63, 1484 |
| BsmAI | GTCTC | 5 cut(s) | 245, 374, 591, 656, 1557 |
| BsmI | GAATGC | 2 cut(s) | 576, 1535 |
| BsnI | GGCC | 1 cut(s) | 268 |
| Bso31I | GGTCTC | 1 cut(s) | 245 |
| BsoBI | CYCGRG | 1 cut(s) | 588 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1358 |
| Bsp13I | TCCGGA | 1 cut(s) | 280 |
| Bsp1407I | TGTACA | 1 cut(s) | 1570 |
| Bsp143I | GATC | 8 cut(s) | 151, 622, 780, 797, 906, 1120, 1385, 1558 |
| Bsp19I | CCATGG | 1 cut(s) | 1608 |
| BspACI | CCGC | 6 cut(s) | 32, 93, 255, 1154, 1186, 1417 |
| BspANI | GGCC | 1 cut(s) | 268 |
| BspCNI | CTCAG | 4 cut(s) | 618, 652, 982, 1021 |
| BspEI | TCCGGA | 1 cut(s) | 280 |
| BspFNI | CGCG | 1 cut(s) | 93 |
| BspMI | ACCTGC | 2 cut(s) | 841, 1540 |
| BspPI | GGATC | 5 cut(s) | 159, 630, 775, 805, 1553 |
| BspTNI | GGTCTC | 1 cut(s) | 245 |
| BsrGI | TGTACA | 1 cut(s) | 1570 |
| BsrI | ACTGG | 2 cut(s) | 799, 1034 |
| BssECI | CCNNGG | 3 cut(s) | 784, 1448, 1608 |
| BssMI | GATC | 8 cut(s) | 151, 622, 780, 797, 906, 1120, 1385, 1558 |
| BssNAI | GTATAC | 1 cut(s) | 436 |
| BssNI | GRCGYC | 1 cut(s) | 36 |
| BssT1I | CCWWGG | 1 cut(s) | 1608 |
| Bst1107I | GTATAC | 1 cut(s) | 436 |
| Bst2UI | CCWGG | 2 cut(s) | 821, 1449 |
| Bst4CI | ACNGT | 8 cut(s) | 82, 385, 555, 638, 808, 827, 1353, 1633 |
| BstACI | GRCGYC | 1 cut(s) | 36 |
| BstAUI | TGTACA | 1 cut(s) | 1570 |
| BstDEI | CTNAG | 7 cut(s) | 626, 660, 969, 1008, 1124, 1215, 1426 |
| BstDSI | CCRYGG | 1 cut(s) | 1608 |
| BstF5I | GGATG | 4 cut(s) | 289, 484, 1247, 1408 |
| BstFNI | CGCG | 1 cut(s) | 93 |
| BstKTI | GATC | 8 cut(s) | 154, 625, 783, 800, 909, 1123, 1388, 1561 |
| BstMAI | GTCTC | 5 cut(s) | 245, 374, 591, 656, 1557 |
| BstMBI | GATC | 8 cut(s) | 151, 622, 780, 797, 906, 1120, 1385, 1558 |
| BstMCI | CGRYCG | 1 cut(s) | 97 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 49, 274 |
| BstNI | CCWGG | 2 cut(s) | 821, 1449 |
| BstNSI | RCATGY | 1 cut(s) | 1423 |
| BstSCI | CCNGG | 4 cut(s) | 443, 784, 819, 1447 |
| BstSFI | CTRYAG | 2 cut(s) | 78, 1113 |
| BstSLI | GKGCMC | 1 cut(s) | 1358 |
| BstUI | CGCG | 1 cut(s) | 93 |
| BstV1I | GCAGC | 1 cut(s) | 1454 |
| BstV2I | GAAGAC | 1 cut(s) | 1036 |
| BstX2I | RGATCY | 3 cut(s) | 622, 780, 1120 |
| BstYI | RGATCY | 3 cut(s) | 622, 780, 1120 |
| BstZ17I | GTATAC | 1 cut(s) | 436 |
| BsuRI | GGCC | 1 cut(s) | 268 |
| BtgI | CCRYGG | 1 cut(s) | 1608 |
| BtgZI | GCGATG | 1 cut(s) | 894 |
| BtrI | CACGTC | 1 cut(s) | 928 |
| BtsCI | GGATG | 4 cut(s) | 289, 484, 1247, 1408 |
| BtsIMutI | CAGTG | 2 cut(s) | 390, 643 |
| BveI | ACCTGC | 2 cut(s) | 841, 1540 |
| CaiI | CAGNNNCTG | 2 cut(s) | 659, 1448 |
| CseI | GACGC | 1 cut(s) | 44 |
| Csp6I | GTAC | 5 cut(s) | 166, 1079, 1423, 1571, 1614 |
| CviAII | CATG | 7 cut(s) | 698, 743, 1292, 1321, 1420, 1566, 1609 |
| CviQI | GTAC | 5 cut(s) | 166, 1079, 1423, 1571, 1614 |
| DdeI | CTNAG | 7 cut(s) | 626, 660, 969, 1008, 1124, 1215, 1426 |
| DpnI | GATC | 8 cut(s) | 153, 624, 782, 799, 908, 1122, 1387, 1560 |
| DpnII | GATC | 8 cut(s) | 151, 622, 780, 797, 906, 1120, 1385, 1558 |
| DraI | TTTAAA | 1 cut(s) | 231 |
| DraIII | CACNNNGTG | 1 cut(s) | 605 |
| EciI | GGCGGA | 1 cut(s) | 47 |
| Eco130I | CCWWGG | 1 cut(s) | 1608 |
| Eco31I | GGTCTC | 1 cut(s) | 245 |
| Eco57I | CTGAAG | 2 cut(s) | 435, 1244 |
| Eco88I | CYCGRG | 1 cut(s) | 588 |
| EcoRII | CCWGG | 2 cut(s) | 819, 1447 |
| EcoT14I | CCWWGG | 1 cut(s) | 1608 |
| ErhI | CCWWGG | 1 cut(s) | 1608 |
| FaeI | CATG | 7 cut(s) | 701, 746, 1295, 1324, 1423, 1569, 1612 |
| FatI | CATG | 7 cut(s) | 697, 742, 1291, 1320, 1419, 1565, 1608 |
| FauI | CCCGC | 1 cut(s) | 1161 |
| FblI | GTMKAC | 1 cut(s) | 435 |
| Fnu4HI | GCNGC | 1 cut(s) | 1443 |
| FokI | GGATG | 4 cut(s) | 296, 491, 1234, 1415 |
| Fsp4HI | GCNGC | 1 cut(s) | 1443 |
| FspBI | CTAG | 6 cut(s) | 105, 713, 917, 1104, 1596, 1617 |
| GluI | GCNGC | 1 cut(s) | 1443 |
| GsuI | CTGGAG | 1 cut(s) | 1051 |
| HaeIII | GGCC | 1 cut(s) | 268 |
| HapII | CCGG | 4 cut(s) | 44, 281, 444, 786 |
| HgaI | GACGC | 1 cut(s) | 44 |
| Hin1I | GRCGYC | 1 cut(s) | 36 |
| Hin1II | CATG | 7 cut(s) | 701, 746, 1295, 1324, 1423, 1569, 1612 |
| HinfI | GANTC | 9 cut(s) | 207, 410, 419, 584, 719, 931, 967, 974, 1406 |
| HpaII | CCGG | 4 cut(s) | 44, 281, 444, 786 |
| HphI | GGTGA | 1 cut(s) | 440 |
| Hpy166II | GTNNAC | 4 cut(s) | 346, 436, 830, 1571 |
| Hpy188I | TCNGA | 7 cut(s) | 415, 496, 627, 1002, 1263, 1487, 1504 |
| Hpy8I | GTNNAC | 4 cut(s) | 346, 436, 830, 1571 |
| Hpy99I | CGWCG | 2 cut(s) | 62, 274 |
| HpyAV | CCTTC | 4 cut(s) | 668, 1077, 1294, 1507 |
| HpyCH4III | ACNGT | 8 cut(s) | 82, 385, 555, 638, 808, 827, 1353, 1633 |
| HpyCH4IV | ACGT | 2 cut(s) | 7, 927 |
| HpyCH4V | TGCA | 9 cut(s) | 467, 574, 836, 1211, 1442, 1535, 1580, 1602, 1637 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 49, 274 |
| HpyF3I | CTNAG | 7 cut(s) | 626, 660, 969, 1008, 1124, 1215, 1426 |
| HpySE526I | ACGT | 2 cut(s) | 7, 927 |
| Hsp92I | GRCGYC | 1 cut(s) | 36 |
| Hsp92II | CATG | 7 cut(s) | 701, 746, 1295, 1324, 1423, 1569, 1612 |
| Kpn2I | TCCGGA | 1 cut(s) | 280 |
| Kzo9I | GATC | 8 cut(s) | 151, 622, 780, 797, 906, 1120, 1385, 1558 |
| LmnI | GCTCC | 1 cut(s) | 1450 |
| Lsp1109I | GCAGC | 1 cut(s) | 1454 |
| LweI | GCATC | 1 cut(s) | 1220 |
| MaeI | CTAG | 6 cut(s) | 105, 713, 917, 1104, 1596, 1617 |
| MaeII | ACGT | 2 cut(s) | 7, 927 |
| MaeIII | GTNAC | 6 cut(s) | 3, 555, 632, 638, 923, 964 |
| MalI | GATC | 8 cut(s) | 153, 624, 782, 799, 908, 1122, 1387, 1560 |
| MboI | GATC | 8 cut(s) | 151, 622, 780, 797, 906, 1120, 1385, 1558 |
| MfeI | CAATTG | 2 cut(s) | 119, 468 |
| MflI | RGATCY | 3 cut(s) | 622, 780, 1120 |
| MhlI | GDGCHC | 1 cut(s) | 1358 |
| MluCI | AATT | 6 cut(s) | 119, 456, 468, 523, 578, 859 |
| MlyI | GAGTC | 4 cut(s) | 593, 728, 961, 1400 |
| MmeI | TCCRAC | 3 cut(s) | 44, 282, 1527 |
| MroI | TCCGGA | 1 cut(s) | 280 |
| MseI | TTAA | 7 cut(s) | 171, 230, 363, 803, 1148, 1347, 1521 |
| MslI | CAYNNNNRTG | 2 cut(s) | 173, 939 |
| MspI | CCGG | 4 cut(s) | 44, 281, 444, 786 |
| MspR9I | CCNGG | 4 cut(s) | 445, 786, 821, 1449 |
| MunI | CAATTG | 2 cut(s) | 119, 468 |
| Mva1269I | GAATGC | 2 cut(s) | 576, 1535 |
| MvaI | CCWGG | 2 cut(s) | 821, 1449 |
| MvnI | CGCG | 1 cut(s) | 93 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 49, 274 |
| NciI | CCSGG | 2 cut(s) | 445, 786 |
| NcoI | CCATGG | 1 cut(s) | 1608 |
| NdeII | GATC | 8 cut(s) | 151, 622, 780, 797, 906, 1120, 1385, 1558 |
| NlaIII | CATG | 7 cut(s) | 701, 746, 1295, 1324, 1423, 1569, 1612 |
| NmeAIII | GCCGAG | 1 cut(s) | 1388 |
| NmuCI | GTSAC | 5 cut(s) | 555, 632, 638, 923, 964 |
| NspI | RCATGY | 1 cut(s) | 1423 |
| OliI | CACNNNNGTG | 1 cut(s) | 939 |
| PaeR7I | CTCGAG | 1 cut(s) | 588 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 193 |
| PctI | GAATGC | 2 cut(s) | 576, 1535 |
| PfeI | GAWTC | 5 cut(s) | 207, 410, 419, 931, 974 |
| PkrI | GCNGC | 1 cut(s) | 1444 |
| PleI | GAGTC | 4 cut(s) | 592, 727, 961, 1400 |
| PpsI | GAGTC | 4 cut(s) | 592, 727, 961, 1400 |
| Psp6I | CCWGG | 2 cut(s) | 819, 1447 |
| PspGI | CCWGG | 2 cut(s) | 819, 1447 |
| PstNI | CAGNNNCTG | 2 cut(s) | 659, 1448 |
| PsuI | RGATCY | 3 cut(s) | 622, 780, 1120 |
| RsaI | GTAC | 5 cut(s) | 167, 1080, 1424, 1572, 1615 |
| RsaNI | GTAC | 5 cut(s) | 166, 1079, 1423, 1571, 1614 |
| RseI | CAYNNNNRTG | 2 cut(s) | 173, 939 |
| SaqAI | TTAA | 7 cut(s) | 171, 230, 363, 803, 1148, 1347, 1521 |
| SatI | GCNGC | 1 cut(s) | 1443 |
| Sau3AI | GATC | 8 cut(s) | 151, 622, 780, 797, 906, 1120, 1385, 1558 |
| SchI | GAGTC | 4 cut(s) | 593, 728, 961, 1400 |
| ScrFI | CCNGG | 4 cut(s) | 445, 786, 821, 1449 |
| SduI | GDGCHC | 1 cut(s) | 1358 |
| SfaNI | GCATC | 1 cut(s) | 1220 |
| SfcI | CTRYAG | 2 cut(s) | 78, 1113 |
| Sfr274I | CTCGAG | 1 cut(s) | 588 |
| SlaI | CTCGAG | 1 cut(s) | 588 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 173, 939 |
| SmlI | CTYRAG | 2 cut(s) | 161, 588 |
| SmoI | CTYRAG | 2 cut(s) | 161, 588 |
| SpeI | ACTAGT | 1 cut(s) | 1616 |
| Sse9I | AATT | 6 cut(s) | 119, 456, 468, 523, 578, 859 |
| SsiI | CCGC | 6 cut(s) | 32, 93, 255, 1154, 1186, 1417 |
| SspMI | CTAG | 6 cut(s) | 105, 713, 917, 1104, 1596, 1617 |
| StyD4I | CCNGG | 4 cut(s) | 443, 784, 819, 1447 |
| StyI | CCWWGG | 1 cut(s) | 1608 |
| TaaI | ACNGT | 8 cut(s) | 82, 385, 555, 638, 808, 827, 1353, 1633 |
| TaiI | ACGT | 2 cut(s) | 10, 930 |
| TaqI | TCGA | 4 cut(s) | 510, 589, 717, 1310 |
| TaqII | GACCGA | 1 cut(s) | 1030 |
| TasI | AATT | 6 cut(s) | 119, 456, 468, 523, 578, 859 |
| TatI | WGTACW | 4 cut(s) | 165, 1078, 1422, 1570 |
| TfiI | GAWTC | 5 cut(s) | 207, 410, 419, 931, 974 |
| Tru1I | TTAA | 7 cut(s) | 171, 230, 363, 803, 1148, 1347, 1521 |
| Tru9I | TTAA | 7 cut(s) | 171, 230, 363, 803, 1148, 1347, 1521 |
| TscAI | CASTG | 2 cut(s) | 390, 643 |
| TseFI | GTSAC | 5 cut(s) | 555, 632, 638, 923, 964 |
| TseI | GCWGC | 1 cut(s) | 1442 |
| Tsp45I | GTSAC | 5 cut(s) | 555, 632, 638, 923, 964 |
| TspDTI | ATGAA | 7 cut(s) | 300, 353, 411, 468, 495, 897, 1539 |
| TspGWI | ACGGA | 1 cut(s) | 1214 |
| TspRI | CASTG | 2 cut(s) | 390, 643 |
| XapI | RAATTY | 1 cut(s) | 523 |
| XceI | RCATGY | 1 cut(s) | 1423 |
| XhoI | CTCGAG | 1 cut(s) | 588 |
| XmiI | GTMKAC | 1 cut(s) | 435 |
| XspI | CTAG | 6 cut(s) | 105, 713, 917, 1104, 1596, 1617 |