Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0002094

Physical Location & Seq

Genomic Coordinates Forward (+)

13746985 .. 13750171

Gene Structure 3187 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG175400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2130 bp

ATGCATCGGGGGAAGGTGCAACTCTCGTCCTTAGAGCCGTCATCTGTAACCCAAAATCAAAGCTTAAAGACCAGGCGGCAGCTTTCTGAAGCTAAAAAGAGTGCTGAAATGAATGGCCTACGAATTGAGGTAACTGAAACATCCAAATTGCAAGACAGGAGTCCTGCTGAAAGCATGGGAGATTTGGCTCCAAGAACTGAGGTTGTCCTAGAGAAGCATTTAACTGAGAATCTGATTGAAGAATCTATCGCAACTAAGGGACATTTTTCCCCAAGAGACCCAAAAGCTGAACTGTCTGGCAAACTAGTAGGCAAAAGATTATCACAGCAAAAAGCTGAACTCTCTGACAAATGTGAAACTAAAAGGTCCAAGAGCGAAGACAGGAGGATAACAGCTGAAAGCAAAGTTGCTGAGGCTGTCCCACAGAAGCATTTGACTGAGAGTATGGTTAAGAAGTGTGCCAAAACCAAGGAAGATTGTTCTCCAAGCAAGTTACTGCCAAATGGAGTCTCTGATAAGCTTGAAGGAAAAATGACAATAGTTGAAGTTGATGGTTCCTTGACAGATCCTGGCAAAGTGATTTTTTCTGAAAACGACCCTGCTTTGACTCGTGCTTCTAACACCTTGAATAACAGGAACTCACTCACGAGTCAGATGGAAAACAGGAACATCAGAAGGTCCCAGGTAGACAATAGAAAATTGAAAAAGGACAAGTTTAATTTGCCTCGTCGGTCCTCAAAACGACTTGCTGGGCAACAACCAGAGCCAGTAAATAACCTGGTTTCAACTGTACAGGCTCGTCAAGTTGCAGCTATAAAGTCTAGTAAAGGGGATGGCAGACAAGATGCAGGTTTGGCTTCAGATGATCTTGAAAATAGAGCACCTCAGCAGCTTGGGGATGCATTAGAAACAGAGGTTGCAGACCATACTCTAACTGAAGTAAATTCTACACTACAAGGAGAGCCATTGAGCAAGGTCAAGAGGCTACTTGAAGGTCTTGAACTACAGCGGTCTGTTGATTCCTTGGGTTCCAACGAACAAACTCTTCAAGTTGCAACCAGAGAGTCTAGTAGAGGTGATGCCAGTCGAGATGCAGGTATGACTTCAAATAAATTTGTCAATGGAGCATCTCTGCAGCTTGGGGCTTCATCAGAACCCGAGTCTTTCTTTGATACCTTAGATGACATAGACTCTATATCATATGAAGAGTCATTGAACAAGGGCAAAATGTTGCTTGATGACCAAGTGGTTCCTAAAGAGCAACATCATAAGTTGGATACTGAGGAAATGGATCCTGAGAAACTCAGCTTTCTGCTTCGAGAAGACTCATCCTTTGAGTTTGCTGTCAAAGTCCTTACAGGGGAATTGCCAATAGATTACGAACCTATTTTGAAACCTGCAGCTGATATGGTGCCAAAGGCAACTGGGAGCTGCAGCAGAAATGCAACTGCCAAGTCCTGTTGCAGTAAAGCCATCCAAGCTGTAGATTCGGCACATGAAGCATCTCAGCAGTTTGAGGCTATCCAAGAGAAGAAGGTAGCAGATGATCCTTGTACTATAACAAACTCTTCACTTCATGAGGAATCTTCGAATGAGATTGAGAAATCTCATGGGAACCAAGCTGCTGATGTGGAGCAACCCCAGATGTCTGAAACTGAGAAGGCTGCTGTCGAGAATCCACAGTTGGACTTCTCATCCCTTTTCCCGGATACTTGGTCCGATTCTGACCCATTCTTTGATCTTGCATATCGGAGTCTTACAGAGGATGATCTGTTTCAGGCTTACTTTCAGGAAAATTACAACCAGATAGATGGCTCGGCACTGCCAGAGTTTGGCTCACCTAGCATTTTCCAGAATGACATGTTTGATCCACCAGAAGAATATGTCCCAGGACACCTGCTGCCCATGAATTCTTCTTTGCCACCTGCGGAAAATGTGAGCCAACCGTTATCCATGAATTCTTCATCCCAGCCTGCAGGAATTGAGGGCTTTTCAAATGGCAATGGGGTTGGTTCAGACCAACAGTTATCCATGAATTCTTCATTCTTGCCAGCAGGAAATGTGGCCTCATCCAACTCGAGTGGGGCTGGTACACAGAAGCCTTGCTTCGGAGGCAAACAGGAAGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MBD

Protein Analysis

709

Amino Acids

77.46

Weight (kDa)

4.95

Isoelectric Point (pI)

55.9

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002094)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G63240
fragaria_vesca	FvH4_5g01860 FvH4_5g01860 FvH4_5g01860 FvH4_5g01860 FvH4_5g01911 FvH4_5g01911
malus_domestica	MD06G1076800.v1.1 MD14G1098200.v1.1
prunus_persica	Prupe.5G094800_v2.0.a1 Prupe.5G094800_v2.0.a1 Prupe.5G094800_v2.0.a1 Prupe.5G094800_v2.0.a1 Prupe.5G094800_v2.0.a1
pyrus_communis	pycom06g07430 pycom06g07440 pycom14g09640
rosa_chinensis	RchiOBHm_Chr7g0198611 RchiOBHm_Chr7g0198661
rosa_laevigata	RLG00000003850 RLG00000003857
rosa_multiflora	Rmu_co8077932.1_g000001 Rmu_co8274787.1_g000001 Rmu_co8506873.1_g000001 Rmu_sc0000220.1_g000017 Rmu_sc0004229.1_g000004
rosa_roxburghii	Rroxscaffold_3G00257550 Rroxscaffold_3G00257620
rosa_rugosa	Rorug07G0048500 Rorug07G0049000 Rorug07G0049100 Rorug07G0049100
rosa_samantha	Rh4BG123200 Rh7AG172000 Rh7AG172600 Rh7BG175400 Rh7BG176100 Rh7CG181500 Rh7CG182000 Rh7DG174500 Rh7DG174900 Rh7DG175200
rosa_wichuraiana	Rw7G015090 Rw7G015150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	1905, 1933
Acc36I	ACCTGC	5 cut(s)	839, 1085, 1405, 1905, 1933
AccB1I	GGYRCC	1 cut(s)	1411
AccB7I	CCANNNNNTGG	1 cut(s)	1832
AccI	GTMKAC	1 cut(s)	687
AciI	CCGC	3 cut(s)	76, 1009, 1928
AclWI	GGATC	5 cut(s)	560, 1286, 1299, 1541, 1862
AcsI	RAATTY	5 cut(s)	943, 1112, 1909, 1957, 2035
AcuI	CTGAAG	3 cut(s)	108, 843, 957
AfaI	GTAC	3 cut(s)	792, 1555, 2092
AfiI	CCNNNNNNNGG	4 cut(s)	1360, 1705, 1832, 2108
AflIII	ACRYGT	1 cut(s)	1860
AhlI	ACTAGT	1 cut(s)	304
AjnI	CCWGG	5 cut(s)	71, 568, 681, 777, 1888
AjuI	GAANNNNNNNTTGG	2 cut(s)	1667, 1699
Alw21I	GWGCWC	1 cut(s)	883
Alw26I	GTCTC	2 cut(s)	270, 514
AlwI	GGATC	5 cut(s)	560, 1286, 1299, 1541, 1862
AlwNI	CAGNNNCTG	1 cut(s)	569
Ama87I	CYCGRG	2 cut(s)	1157, 2077
AoxI	GGCC	2 cut(s)	115, 2064
ApoI	RAATTY	5 cut(s)	943, 1112, 1909, 1957, 2035
ArsI	GACNNNNNNTTYG	4 cut(s)	1316, 1348, 1718, 1750
AspS9I	GGNCC	4 cut(s)	366, 678, 732, 1716
AsuC2I	CCSGG	1 cut(s)	1706
AsuHPI	GGTGA	2 cut(s)	1088, 1830
AsuII	TTCGAA	1 cut(s)	1589
AvaI	CYCGRG	2 cut(s)	1157, 2077
AvaII	GGWCC	4 cut(s)	366, 678, 732, 1716
BamHI	GGATCC	1 cut(s)	1291
BanI	GGYRCC	1 cut(s)	1411
BauI	CACGAG	2 cut(s)	609, 646
BbsI	GAAGAC	2 cut(s)	384, 1329
Bbv12I	GWGCWC	1 cut(s)	883
BbvCI	CCTCAGC	2 cut(s)	411, 885
BccI	CCATC	5 cut(s)	545, 649, 827, 1481, 1805
BceAI	ACGGC	1 cut(s)	22
BciT130I	CCWGG	5 cut(s)	73, 570, 683, 779, 1890
BciVI	GTATCC	2 cut(s)	1270, 1702
BcnI	CCSGG	1 cut(s)	1706
BcoDI	GTCTC	2 cut(s)	270, 514
BcuI	ACTAGT	1 cut(s)	304
BfaI	CTAG	5 cut(s)	209, 305, 822, 1068, 1842
BfmI	CTRYAG	6 cut(s)	1004, 1133, 1398, 1432, 1482, 1974
BfuAI	ACCTGC	5 cut(s)	839, 1085, 1405, 1905, 1933
BfuI	GTATCC	2 cut(s)	1270, 1702
Bme1390I	CCNGG	6 cut(s)	73, 570, 683, 779, 1706, 1890
Bme18I	GGWCC	4 cut(s)	366, 678, 732, 1716
BmeT110I	CYCGRG	2 cut(s)	1157, 2077
BmgT120I	GGNCC	4 cut(s)	366, 678, 732, 1716
BmiI	GGNNCC	8 cut(s)	189, 556, 680, 1030, 1251, 1293, 1413, 1616
BmrFI	CCNGG	6 cut(s)	73, 570, 683, 779, 1706, 1890
BmrI	ACTGGG	1 cut(s)	1434
BmsI	GCATC	7 cut(s)	13, 835, 889, 1069, 1081, 1136, 1511
BmuI	ACTGGG	1 cut(s)	1434
BoxI	GACNNNNGTC	1 cut(s)	159
BpiI	GAAGAC	2 cut(s)	384, 1329
BplI	GAGNNNNNCTC	2 cut(s)	1820, 1852
Bpu10I	CCTNAGC	2 cut(s)	411, 885
Bpu14I	TTCGAA	1 cut(s)	1589
BpuMI	CCSGG	1 cut(s)	1706
BsaI	GGTCTC	1 cut(s)	270
BsaJI	CCNNGG	4 cut(s)	468, 681, 1023, 1888
Bsc4I	CCNNNNNNNGG	4 cut(s)	1360, 1705, 1832, 2108
Bse1I	ACTGG	3 cut(s)	767, 1083, 1429
Bse3DI	GCAATG	1 cut(s)	2008
BseBI	CCWGG	5 cut(s)	73, 570, 683, 779, 1890
BseDI	CCNNGG	4 cut(s)	468, 681, 1023, 1888
BseGI	GGATG	9 cut(s)	140, 838, 904, 1328, 1473, 1694, 1771, 1964, 2069
BseLI	CCNNNNNNNGG	4 cut(s)	1360, 1705, 1832, 2108
BseMI	GCAATG	1 cut(s)	2008
BseNI	ACTGG	3 cut(s)	767, 1083, 1429
BseYI	CCCAGC	2 cut(s)	749, 1968
BshFI	GGCC	2 cut(s)	117, 2066
BshNI	GGYRCC	1 cut(s)	1411
BsiHKAI	GWGCWC	1 cut(s)	883
BsiHKCI	CYCGRG	2 cut(s)	1157, 2077
BsiSI	CCGG	1 cut(s)	1706
BslFI	GGGAC	4 cut(s)	273, 404, 664, 1871
BslI	CCNNNNNNNGG	4 cut(s)	1360, 1705, 1832, 2108
BsmAI	GTCTC	2 cut(s)	270, 514
BsmFI	GGGAC	4 cut(s)	273, 404, 664, 1871
BsnI	GGCC	2 cut(s)	117, 2066
Bso31I	GGTCTC	1 cut(s)	270
BsoBI	CYCGRG	2 cut(s)	1157, 2077
Bsp119I	TTCGAA	1 cut(s)	1589
Bsp1286I	GDGCHC	1 cut(s)	883
Bsp1407I	TGTACA	1 cut(s)	790
Bsp143I	GATC	7 cut(s)	565, 865, 1291, 1546, 1738, 1768, 1867
BspACI	CCGC	3 cut(s)	76, 1009, 1928
BspANI	GGCC	2 cut(s)	117, 2066
BspHI	TCATGA	1 cut(s)	1576
BspLI	GGNNCC	8 cut(s)	189, 556, 680, 1030, 1251, 1293, 1413, 1616
BspMAI	CTGCAG	4 cut(s)	1137, 1402, 1436, 1978
BspMI	ACCTGC	5 cut(s)	839, 1085, 1405, 1905, 1933
BspPI	GGATC	5 cut(s)	560, 1286, 1299, 1541, 1862
BspT104I	TTCGAA	1 cut(s)	1589
BspT107I	GGYRCC	1 cut(s)	1411
BspTNI	GGTCTC	1 cut(s)	270
BsrDI	GCAATG	1 cut(s)	2008
BsrGI	TGTACA	1 cut(s)	790
BsrI	ACTGG	3 cut(s)	767, 1083, 1429
BssECI	CCNNGG	4 cut(s)	468, 681, 1023, 1888
BssMI	GATC	7 cut(s)	565, 865, 1291, 1546, 1738, 1768, 1867
BssSI	CACGAG	2 cut(s)	609, 646
BssT1I	CCWWGG	2 cut(s)	468, 1023
Bst2BI	CACGAG	2 cut(s)	609, 646
Bst2UI	CCWGG	5 cut(s)	73, 570, 683, 779, 1890
Bst4CI	ACNGT	5 cut(s)	294, 790, 1683, 1947, 2025
Bst6I	CTCTTC	3 cut(s)	1050, 1200, 1573
BstAUI	TGTACA	1 cut(s)	790
BstBI	TTCGAA	1 cut(s)	1589
BstC8I	GCNNGC	2 cut(s)	1974, 2052
BstF5I	GGATG	9 cut(s)	140, 838, 904, 1328, 1473, 1694, 1771, 1964, 2069
BstKTI	GATC	7 cut(s)	568, 868, 1294, 1549, 1741, 1771, 1870
BstMAI	GTCTC	2 cut(s)	270, 514
BstMBI	GATC	7 cut(s)	565, 865, 1291, 1546, 1738, 1768, 1867
BstMWI	GCNNNNNNNGC	5 cut(s)	854, 1478, 1499, 1842, 2112
BstNI	CCWGG	5 cut(s)	73, 570, 683, 779, 1890
BstNSI	RCATGY	1 cut(s)	1864
BstPAI	GACNNNNGTC	1 cut(s)	159
BstSCI	CCNGG	6 cut(s)	71, 568, 681, 777, 1704, 1888
BstSFI	CTRYAG	6 cut(s)	1004, 1133, 1398, 1432, 1482, 1974
BstV2I	GAAGAC	2 cut(s)	384, 1329
BstX2I	RGATCY	2 cut(s)	565, 1291
BstXI	CCANNNNNNTGG	1 cut(s)	1811
BstYI	RGATCY	2 cut(s)	565, 1291
BsuI	GTATCC	2 cut(s)	1270, 1702
BsuRI	GGCC	2 cut(s)	117, 2066
BtsCI	GGATG	9 cut(s)	140, 838, 904, 1328, 1473, 1694, 1771, 1964, 2069
BtsI	GCAGTG	1 cut(s)	1820
BtsIMutI	CAGTG	1 cut(s)	1820
BveI	ACCTGC	5 cut(s)	839, 1085, 1405, 1905, 1933
Cac8I	GCNNGC	2 cut(s)	1974, 2052
CaiI	CAGNNNCTG	1 cut(s)	569
CciI	TCATGA	1 cut(s)	1576
Cfr13I	GGNCC	4 cut(s)	366, 678, 732, 1716
CsiI	ACCWGGT	1 cut(s)	777
Csp6I	GTAC	3 cut(s)	791, 1554, 2091
CspCI	CAANNNNNGTGG	2 cut(s)	2062, 2097
CviAII	CATG	8 cut(s)	175, 1496, 1577, 1610, 1861, 1906, 1954, 2032
CviQI	GTAC	3 cut(s)	791, 1554, 2091
DpnI	GATC	7 cut(s)	567, 867, 1293, 1548, 1740, 1770, 1869
DpnII	GATC	7 cut(s)	565, 865, 1291, 1546, 1738, 1768, 1867
Eam1104I	CTCTTC	3 cut(s)	1050, 1200, 1573
EarI	CTCTTC	3 cut(s)	1050, 1200, 1573
Eco130I	CCWWGG	2 cut(s)	468, 1023
Eco31I	GGTCTC	1 cut(s)	270
Eco47I	GGWCC	4 cut(s)	366, 678, 732, 1716
Eco57I	CTGAAG	3 cut(s)	108, 843, 957
Eco88I	CYCGRG	2 cut(s)	1157, 2077
EcoO109I	RGGNCCY	1 cut(s)	678
EcoRI	GAATTC	3 cut(s)	1909, 1957, 2035
EcoRII	CCWGG	5 cut(s)	71, 568, 681, 777, 1888
EcoT14I	CCWWGG	2 cut(s)	468, 1023
EcoT22I	ATGCAT	2 cut(s)	6, 904
ErhI	CCWWGG	2 cut(s)	468, 1023
FaeI	CATG	8 cut(s)	178, 1499, 1580, 1613, 1864, 1909, 1957, 2035
FalI	AAGNNNNNCTT	2 cut(s)	2090, 2122
FaqI	GGGAC	4 cut(s)	273, 404, 664, 1871
FatI	CATG	8 cut(s)	174, 1495, 1576, 1609, 1860, 1905, 1953, 2031
FauNDI	CATATG	1 cut(s)	1201
FblI	GTMKAC	1 cut(s)	687
FokI	GGATG	9 cut(s)	127, 845, 911, 1315, 1460, 1681, 1778, 1951, 2056
FspBI	CTAG	5 cut(s)	209, 305, 822, 1068, 1842
GsaI	CCCAGC	2 cut(s)	753, 1972
HaeIII	GGCC	2 cut(s)	117, 2066
HapII	CCGG	1 cut(s)	1706
Hin1II	CATG	8 cut(s)	178, 1499, 1580, 1613, 1864, 1909, 1957, 2035
HindIII	AAGCTT	2 cut(s)	61, 518
HpaII	CCGG	1 cut(s)	1706
HphI	GGTGA	2 cut(s)	1088, 1830
Hpy166II	GTNNAC	2 cut(s)	688, 2093
Hpy8I	GTNNAC	2 cut(s)	688, 2093
Hpy99I	CGWCG	1 cut(s)	732
HpyAV	CCTTC	6 cut(s)	7, 518, 669, 986, 1528, 1654
HpyCH4III	ACNGT	5 cut(s)	294, 790, 1683, 1947, 2025
HpyF10VI	GCNNNNNNNGC	5 cut(s)	854, 1478, 1499, 1842, 2112
Hsp92II	CATG	8 cut(s)	178, 1499, 1580, 1613, 1864, 1909, 1957, 2035
Kzo9I	GATC	7 cut(s)	565, 865, 1291, 1546, 1738, 1768, 1867
LmnI	GCTCC	4 cut(s)	193, 1124, 1428, 1633
LweI	GCATC	7 cut(s)	13, 835, 889, 1069, 1081, 1136, 1511
MabI	ACCWGGT	1 cut(s)	777
MaeI	CTAG	5 cut(s)	209, 305, 822, 1068, 1842
MaeIII	GTNAC	3 cut(s)	46, 130, 492
MalI	GATC	7 cut(s)	567, 867, 1293, 1548, 1740, 1770, 1869
MboI	GATC	7 cut(s)	565, 865, 1291, 1546, 1738, 1768, 1867
MflI	RGATCY	2 cut(s)	565, 1291
MhlI	GDGCHC	1 cut(s)	883
MmeI	TCCRAC	4 cut(s)	1056, 1254, 1665, 2097
Mph1103I	ATGCAT	2 cut(s)	6, 904
MseI	TTAA	4 cut(s)	65, 221, 450, 717
MspA1I	CMGCKG	3 cut(s)	395, 1009, 1403
MspI	CCGG	1 cut(s)	1706
MspR9I	CCNGG	6 cut(s)	73, 570, 683, 779, 1706, 1890
MvaI	CCWGG	5 cut(s)	73, 570, 683, 779, 1890
MwoI	GCNNNNNNNGC	5 cut(s)	854, 1478, 1499, 1842, 2112
NciI	CCSGG	1 cut(s)	1706
NdeI	CATATG	1 cut(s)	1201
NdeII	GATC	7 cut(s)	565, 865, 1291, 1546, 1738, 1768, 1867
NlaIII	CATG	8 cut(s)	178, 1499, 1580, 1613, 1864, 1909, 1957, 2035
NlaIV	GGNNCC	8 cut(s)	189, 556, 680, 1030, 1251, 1293, 1413, 1616
NmeAIII	GCCGAG	1 cut(s)	1796
NsiI	ATGCAT	2 cut(s)	6, 904
NspI	RCATGY	1 cut(s)	1864
NspV	TTCGAA	1 cut(s)	1589
PaeR7I	CTCGAG	1 cut(s)	2077
PagI	TCATGA	1 cut(s)	1576
PaqCI	CACCTGC	2 cut(s)	1905, 1933
PciI	ACATGT	1 cut(s)	1860
PfeI	GAWTC	7 cut(s)	229, 242, 1019, 1487, 1583, 1675, 1721
PflMI	CCANNNNNTGG	1 cut(s)	1832
PfoI	TCCNGGA	1 cut(s)	1704
PpuMI	RGGWCCY	1 cut(s)	678
PscI	ACATGT	1 cut(s)	1860
PshAI	GACNNNNGTC	1 cut(s)	159
Psp5II	RGGWCCY	1 cut(s)	678
Psp6I	CCWGG	5 cut(s)	71, 568, 681, 777, 1888
PspFI	CCCAGC	2 cut(s)	749, 1968
PspGI	CCWGG	5 cut(s)	71, 568, 681, 777, 1888
PspN4I	GGNNCC	8 cut(s)	189, 556, 680, 1030, 1251, 1293, 1413, 1616
PspPI	GGNCC	4 cut(s)	366, 678, 732, 1716
PspPPI	RGGWCCY	1 cut(s)	678
PspXI	VCTCGAGB	1 cut(s)	2077
PstI	CTGCAG	4 cut(s)	1137, 1402, 1436, 1978
PstNI	CAGNNNCTG	1 cut(s)	569
PsuI	RGATCY	2 cut(s)	565, 1291
PvuII	CAGCTG	2 cut(s)	395, 1403
RsaI	GTAC	3 cut(s)	792, 1555, 2092
RsaNI	GTAC	3 cut(s)	791, 1554, 2091
SaqAI	TTAA	4 cut(s)	65, 221, 450, 717
Sau3AI	GATC	7 cut(s)	565, 865, 1291, 1546, 1738, 1768, 1867
Sau96I	GGNCC	4 cut(s)	366, 678, 732, 1716
SbfI	CCTGCAGG	1 cut(s)	1978
ScrFI	CCNGG	6 cut(s)	73, 570, 683, 779, 1706, 1890
SdaI	CCTGCAGG	1 cut(s)	1978
SduI	GDGCHC	1 cut(s)	883
SexAI	ACCWGGT	1 cut(s)	777
SfaNI	GCATC	7 cut(s)	13, 835, 889, 1069, 1081, 1136, 1511
SfcI	CTRYAG	6 cut(s)	1004, 1133, 1398, 1432, 1482, 1974
Sfr274I	CTCGAG	1 cut(s)	2077
SfuI	TTCGAA	1 cut(s)	1589
SinI	GGWCC	4 cut(s)	366, 678, 732, 1716
SlaI	CTCGAG	1 cut(s)	2077
SmlI	CTYRAG	1 cut(s)	2077
SmoI	CTYRAG	1 cut(s)	2077
SpeI	ACTAGT	1 cut(s)	304
Sse8387I	CCTGCAGG	1 cut(s)	1978
SsiI	CCGC	3 cut(s)	76, 1009, 1928
SspMI	CTAG	5 cut(s)	209, 305, 822, 1068, 1842
StyD4I	CCNGG	6 cut(s)	71, 568, 681, 777, 1704, 1888
StyI	CCWWGG	2 cut(s)	468, 1023
TaaI	ACNGT	5 cut(s)	294, 790, 1683, 1947, 2025
TaqI	TCGA	5 cut(s)	1087, 1318, 1589, 1671, 2078
TaqII	GACCGA	1 cut(s)	720
TatI	WGTACW	2 cut(s)	790, 1553
TauI	GCSGC	1 cut(s)	79
TfiI	GAWTC	7 cut(s)	229, 242, 1019, 1487, 1583, 1675, 1721
Tru1I	TTAA	4 cut(s)	65, 221, 450, 717
Tru9I	TTAA	4 cut(s)	65, 221, 450, 717
TscAI	CASTG	1 cut(s)	1827
TspRI	CASTG	1 cut(s)	1827
Van91I	CCANNNNNTGG	1 cut(s)	1832
VpaK11BI	GGWCC	4 cut(s)	366, 678, 732, 1716
XapI	RAATTY	5 cut(s)	943, 1112, 1909, 1957, 2035
XceI	RCATGY	1 cut(s)	1864
XhoI	CTCGAG	1 cut(s)	2077
XmiI	GTMKAC	1 cut(s)	687
XspI	CTAG	5 cut(s)	209, 305, 822, 1068, 1842
Zsp2I	ATGCAT	2 cut(s)	6, 904

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.